Pregenerated sensors for SLC22A5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018900Ensembl transcript IDs: ENSMUST00000019044.8, ENSMUST00000136307.2, ENSMUST00000152084.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGCTCTAGTGGCTAAGATTGGGAAGGCCTTGTATGGTGGTAACTaGACACCAGCCAGGGTGACCCTGGGCTGGGGAACACAGGCAGTT | + |
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Preference number: 1 (lower is better) Translates to: AALVAKIGKALYGGN*TPARVTLGWGTQAV Trigger: AACTGCCTGTGTTCCCCAGCCCAGGGTCACCCTGGCTGGTGTGCAGTTACCACCATACAAGGCCTTCCCAATCTTAGCCACTAGAGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| 3UTR TCA 90 bp | GGTACAGCTCAGCTGTGTACACATAGACCATGGAGTAGGCAGAGGTaGTTCCAAACTTCCCCACCATCACCAGGGCAGTGGACAAGTAAA | + |
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Preference number: 1 (lower is better) Translates to: GTAQLCTHRPWSRQR*FQTSPPSPGQWTSK Trigger: TTTACTTGTCCACTGCCCTGGTGATGGTGGGGAAGTTTGGAATCACCTCTGCCTACTCCATGGTCTATGTGTACACAGCTGAGCTGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR GCA 90 bp | TGCAACAATCCCATTGATTTTGGCAGCTTTGCGGATGATCACCTCTaGCTCTTTAATTCGGCCTTGAGAGATGAGCCATCGTGGGGACTC | + |
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Preference number: 1 (lower is better) Translates to: CNNPIDFGSFADDHL*LFNSALRDEPSWGL Trigger: GAGTCCCCACGATGGCTCATCTCTCAAGGCCGAATTAAAGAGGCAGAGGTGATCATCCGCAAAGCTGCCAAAATCAATGGGATTGTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136307.2 |
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| 3UTR TCA 90 bp | TACATTTCCTTCAAGACACAGATAAGTGGCTGGCAGCCAGAATTTTaGTTTACACAGCAGTGGAAGACAAGCCTTGGCCTCAACAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: YISFKTQISGWQPEF*FTQQWKTSLGLNSR Trigger: TCTACTGTTGAGGCCAAGGCTTGTCTTCCACTGCTGTGTAAATCAAAATTCTGGCTGCCAGCCACTTATCTGTGTCTTGAAGGAAATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| 3UTR TCA 90 bp | TTTGCATTCTTGTCTGGCTTTGGATTTGCCACTGTTTTATTCCTTTaGCCCTTAGCATCTGGTCAATGGTATCTGGGAGAGGGACACCAA | + |
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Preference number: 1 (lower is better) Translates to: FAFLSGFGFATVLFL*PLASGQWYLGEGHQ Trigger: TTGGTGTCCCTCTCCCAGATACCATTGACCAGATGCTAAGGGTCAAAGGAATAAAACAGTGGCAAATCCAAAGCCAGACAAGAATGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR GCA 90 bp | AAGGCTGTGCTCTTTAGGACTGTTGGGCTTTCTTCACCATCTTTTTaGATTCTTGTCTGGCTTTGGATTTGCCACTGTTTTATTCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: KAVLFRTVGLSSPSF*ILVWLWICHCFIPL Trigger: CAAAGGAATAAAACAGTGGCAAATCCAAAGCCAGACAAGAATGCAAAAAGATGGTGAAGAAAGCCCAACAGTCCTAAAGAGCACAGCCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR CCA 90 bp | ACTGTTGGGCTTTCTTCACCATCTTTTTGCATTCTTGTCTGGCTTTaGATTTGCCACTGTTTTATTCCTTTGACCCTTAGCATCTGGTCA | + |
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Preference number: 1 (lower is better) Translates to: TVGLSSPSFCILVWL*ICHCFIPLTLSIWS Trigger: TGACCAGATGCTAAGGGTCAAAGGAATAAAACAGTGGCAAATCCAAAGCCAGACAAGAATGCAAAAAGATGGTGAAGAAAGCCCAACAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR-3UTR TCA 90 bp | GCTCTCAGGGAAGAACAAGGTGAGGATAGCTGTCAGGATGGTCAGACTTCCCATGGGATGCTGTGGAGCTaGCCCCCACACCCATGTTTC | + |
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Preference number: 2 (lower is better) Translates to: ALREEQGEDSCQDGQTSHGMLWS*PPHPCF Trigger: GAAACATGGGTGTGGGGGTCAGCTCCACAGCATCCC...ATGGGAAGTCTGACCATCCTGACAGCTATCCTCACCTTGTTCTTCCCTGAGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTGGAAGGCCCACATCCACCACTGTGATGGGACGTGCAAGCTGTTTGGTTCCACACCCATGTTTCTaGCCACAGTGGGGTACAGCT | + |
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Preference number: 2 (lower is better) Translates to: FFGRPTSTTVMGRASCLVPHPCF*PQWGTA Trigger: AGCTGTACCCCACTGTGGTCAGAAACATGGGTGTGG...AACCAAACAGCTTGCACGTCCCATCACAGTGGTGGATGTGGGCCTTCCAAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR CAA 90 bp | GCTGGCAGCCAGAATTTTGATTTACACAGCAGTGGAAGACAAGCCTaGGCCTCAACAGTAGATTTCTCACAGGGCCTGGACAAGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: AGSQNFDLHSSGRQA*ASTVDFSQGLDKPR Trigger: CCTGGGCTTGTCCAGGCCCTGTGAGAAATCTACTGTTGAGGCCAAGGCTTGTCTTCCACTGCTGTGTAAATCAAAATTCTGGCTGCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| 3UTR-3UTR CCA 90 bp | GCAACAATCCCATTGATTTTGGCAGCTTTGCGGATGATCACCTCTGCCTCTTTAAGAGATGAGCCATCGTaGGGACTCAGGGATGAACCA | + |
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Preference number: 2 (lower is better) Translates to: ATIPLILAALRMITSASLRDEPS*GLRDEP Trigger: TGGTTCATCCCTGAGTCCCCACGATGGCTCATCTCT...TAAAGAGGCAGAGGTGATCATCCGCAAAGCTGCCAAAATCAATGGGATTGTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136307.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATTGATTTTGGCAGCTTTGCGGATGATCACCTCTGCCTCTTTAATTCGGCCGAAGTATGCAAACAGTaGCAGCACCATGAAGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: PIDFGSFADDHLCLFNSAEVCKQ*QHHEAK Trigger: TTTGGCTTCATGGTGCTGCCACTGTTTGCATACTTC...GGCCGAATTAAAGAGGCAGAGGTGATCATCCGCAAAGCTGCCAAAATCAATGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136307.2 |
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| 3UTR-3UTR GCA 90 bp | ACCATCTTTTTGCATTCTTGTCTGGCTTTGGATTTGCCACTGTTTTATTCCTTTAGGGAGACAGGATGCTaGCAAGGCGGGATGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: TIFLHSCLALDLPLFYSFRETGC*QGGMLW Trigger: CCACAGCATCCCGCCTTGGCAGCATCCTGTCTCCCT...AAAGGAATAAAACAGTGGCAAATCCAAAGCCAGACAAGAATGCAAAAAGATGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR-3UTR TCA 90 bp | AGCATGTTAGACACAAGGTTAACAGAACAGAAAAGCCCTCAGTCATGGAGAGCATGGTCAGACTTCCCATaGGAATATAAGGCAGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: SMLDTRLTEQKSPQSWRAWSDFP*EYKAGS Trigger: GCTTCCTGCCTTATATTCTCATGGGAAGTCTGACCA...TGCTCTCCATGACTGAGGGCTTTTCTGTTCTGTTAACCTTGTGTCTAACATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGACTCTCCAGGACAGATGCCCCAATCCATGAGCATGTTAGACACAAGGTTATTTTGCATTCTTGTCTaGCTTTGGATTTGCCACTGT | + |
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Preference number: 2 (lower is better) Translates to: GDSPGQMPQSMSMLDTRLFCILV*LWICHC Trigger: ACAGTGGCAAATCCAAAGCCAGACAAGAATGCAAAA...TAACCTTGTGTCTAACATGCTCATGGATTGGGGCATCTGTCCTGGAGAGTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR CAA 90 bp | TTTTGCATTCTTGTCTGGCTTTGGATTTGCCACTGTTTTATTCCTTaGACCCTTAGCATCTGGTCAATGGTATCTGGGAGAGGGACACCA | + |
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Preference number: 2 (lower is better) Translates to: FCILVWLWICHCFIP*TLSIWSMVSGRGTP Trigger: TGGTGTCCCTCTCCCAGATACCATTGACCAGATGCTAAGGGTCAAAGGAATAAAACAGTGGCAAATCCAAAGCCAGACAAGAATGCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR-3UTR TCA 90 bp | TCACCATCTTTTTGCATTCTTGTCTGGCTTTGGATTTGCCACTGTTTTATTCCTTGGAGTAGGCAGAGGTaGTTCCAAACTTCCCCACCA | + |
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Preference number: 2 (lower is better) Translates to: SPSFCILVWLWICHCFIPWSRQR*FQTSPP Trigger: TGGTGGGGAAGTTTGGAATCACCTCTGCCTACTCCA...AGGAATAAAACAGTGGCAAATCCAAAGCCAGACAAGAATGCAAAAAGATGGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR-3UTR GCA 90 bp | AGAACAGAAAAGCCCTCAGTCATGGAGAGCATTTCTGACAACATGAAGGTTTCCAGAGGGAAAAAGACCTaGTGTTCTATGTGCACCCTT | + |
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Preference number: 2 (lower is better) Translates to: RTEKPSVMESISDNMKVSRGKKT*CSMCTL Trigger: AAGGGTGCACATAGAACAGCAGGTCTTTTTCCCTCT...GGAAACCTTCATGTTGTCAGAAATGCTCTCCATGACTGAGGGCTTTTCTGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019044.8 ENSMUST00000152084.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCATGTTAGACACAAGGTTAACAGAACAGAAAAGCCCTCAGTCATGGAGAGCACTGTTTTATTCCTTTaGCCCTTAGCATCTGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: EHVRHKVNRTEKPSVMESTVLFL*PLASGQ Trigger: TTGACCAGATGCTAAGGGTCAAAGGAATAAAACAGT...GCTCTCCATGACTGAGGGCTTTTCTGTTCTGTTAACCTTGTGTCTAACATGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR-3UTR GCA 90 bp | GATGCCCCAATCCATGAGCATGTTAGACACAAGGTTAACAGAACAGAAAAGCCCGTCTGGCTTTGGATTTaGCACTGTTTTATTCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: DAPIHEHVRHKVNRTEKPVWLWI*HCFIPL Trigger: CAAAGGAATAAAACAGTGGCAAATCCAAAGCCAGAC...GGGCTTTTCTGTTCTGTTAACCTTGTGTCTAACATGCTCATGGATTGGGGCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAGGGAAGGGACACTCTGTTATCCATACATTTCCTTCAAGACACAGATAAGTCATGGAGAGCATTTCTaGCAACATGAAGGTTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: EREGTLCYPYISFKTQISHGEHF*QHEGFQ Trigger: TTGGAAACCTTCATGTTGTCAGAAATGCTCTCCATG...ACTTATCTGTGTCTTGAAGGAAATGTATGGATAACAGAGTGTCCCTTCCCTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| 3UTR-3UTR CCA 90 bp | TCACCATCTTTTTGCATTCTTGTCTGGCTTTGGATTTGCCACTGTTTTATTCCTTTAGCATCTGGTCAATaGTATCTGGGAGAGGGACAC | + |
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Preference number: 2 (lower is better) Translates to: SPSFCILVWLWICHCFIPLASGQ*YLGEGH Trigger: GTGTCCCTCTCCCAGATACCATTGACCAGATGCTAA...AGGAATAAAACAGTGGCAAATCCAAAGCCAGACAAGAATGCAAAAAGATGGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR-3UTR CCA 90 bp | ACCATCTTTTTGCATTCTTGTCTGGCTTTGGATTTGCCACTGTTTTATTCCTTTAAAAGCCCTCAGTCATaGAGAGCATTTCTGACAACA | + |
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Preference number: 2 (lower is better) Translates to: TIFLHSCLALDLPLFYSFKSPQS*RAFLTT Trigger: TGTTGTCAGAAATGCTCTCCATGACTGAGGGCTTTT...AAAGGAATAAAACAGTGGCAAATCCAAAGCCAGACAAGAATGCAAAAAGATGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGGAAGGCCCACATCCACCACTGTGATGGGACGTGCAAGCTGTTTGGTTAGCGGACGTGCAAGCTGTTaGGTTAGCCTTGGTGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: FGRPTSTTVMGRASCLVSGRASC*VSLGGP Trigger: AGGGCCACCAAGGCTAACCAAACAGCTTGCACGTCC...GCTAACCAAACAGCTTGCACGTCCCATCACAGTGGTGGATGTGGGCCTTCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019044.8 ENSMUST00000152084.2 |
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| 3UTR TCA 72 bp | CAGCTGTGTACACATAGACCATGGAGTAGGCAGAGGTaGTTCCAAACTTCCCCACCATCACCAGGGCAGTGG | + |
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Preference number: 3 (lower is better) Translates to: QLCTHRPWSRQR*FQTSPPSPGQW Trigger: CCACTGCCCTGGTGATGGTGGGGAAGTTTGGAATCACCTCTGCCTACTCCATGGTCTATGTGTACACAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGCTGTGGGACTGAGCAGTCACAGTCAACACATTGTCTGCTTTATGGACCAGGCTGTTTGGTTAGCCTaGGTGGCCCTAGAGGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: LAVGLSSHSQHIVCFMDQAVWLA*VALEEG Trigger: ACCTTCCTCTAGGGCCACCAAGGCTAACCAAACAGC...CTGGTCCATAAAGCAGACAATGTGTTGACTGTGACTGCTCAGTCCCACAGCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| 3UTR-3UTR CAA 90 bp | CACTGTTTTATTCCTTTGACCCTTAGCATCTGGTCAATGGTATCTGGGAGAGGGGCTGTTTGGTTAGCCTaGGTGGCCCTAGAGGAAGGT | + |
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Preference number: 3 (lower is better) Translates to: HCFIPLTLSIWSMVSGRGAVWLA*VALEEG Trigger: ACCTTCCTCTAGGGCCACCAAGGCTAACCAAACAGC...CCCTCTCCCAGATACCATTGACCAGATGCTAAGGGTCAAAGGAATAAAACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR-3UTR CAA 90 bp | ATGAGCATGTTAGACACAAGGTTAACAGAACAGAAAAGCCCTCAGTCATGGAGAGGACGTGCAAGCTGTTaGGTTAGCCTTGGTGGCCCT | + |
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Preference number: 3 (lower is better) Translates to: MSMLDTRLTEQKSPQSWRGRASC*VSLGGP Trigger: AGGGCCACCAAGGCTAACCAAACAGCTTGCACGTCC...TCTCCATGACTGAGGGCTTTTCTGTTCTGTTAACCTTGTGTCTAACATGCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019044.8 ENSMUST00000152084.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGGAAGGCCCACATCCACCACTGTGATGGGACGTGCAAGCTGTTTGGTTAGCTCTTCCAAGTCCTGCTaGTTCAAGAGACTCATTCAT | + |
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Preference number: 3 (lower is better) Translates to: FGRPTSTTVMGRASCLVSSSKSC*FKRLIH Trigger: ATGAATGAGTCTCTTGAACAAGCAGGACTTGGAAGA...GCTAACCAAACAGCTTGCACGTCCCATCACAGTGGTGGATGTGGGCCTTCCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019044.8 ENSMUST00000152084.2 |
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| 3UTR-3UTR CAA 90 bp | TTTGGAAGGCCCACATCCACCACTGTGATGGGACGTGCAAGCTGTTTGGTTAGCCATCTTTTTGCATTCTaGTCTGGCTTTGGATTTGCC | + |
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Preference number: 3 (lower is better) Translates to: FGRPTSTTVMGRASCLVSHLFAF*SGFGFA Trigger: GGCAAATCCAAAGCCAGACAAGAATGCAAAAAGATG...GCTAACCAAACAGCTTGCACGTCCCATCACAGTGGTGGATGTGGGCCTTCCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR CCA 72 bp | TCTGCTTTATGGACCAGCCTCCACCTTAGTCTCCTTTaGGCTCCCTCAGTCTTTGTTATGTCACGAGTTAAG | + |
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Preference number: 3 (lower is better) Translates to: SALWTSLHLSLL*APSVFVMSRVK Trigger: CTTAACTCGTGACATAACAAAGACTGAGGGAGCCCAAAGGAGACTAAGGTGGAGGCTGGTCCATAAAGCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| 3UTR TCA 72 bp | TTCAAGACACAGATAAGTGGCTGGCAGCCAGAATTTTaGTTTACACAGCAGTGGAAGACAAGCCTTGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: FKTQISGWQPEF*FTQQWKTSLGL Trigger: GAGGCCAAGGCTTGTCTTCCACTGCTGTGTAAATCAAAATTCTGGCTGCCAGCCACTTATCTGTGTCTTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| 3UTR-3UTR CAA 90 bp | GGTGACTCTCCAGGACAGATGCCCCAATCCATGAGCATGTTAGACACAAGGTTACATTCTTGTCTGGCTTaGGATTTGCCACTGTTTTAT | + |
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Preference number: 3 (lower is better) Translates to: GDSPGQMPQSMSMLDTRLHSCLA*DLPLFY Trigger: ATAAAACAGTGGCAAATCCAAAGCCAGACAAGAATG...TAACCTTGTGTCTAACATGCTCATGGATTGGGGCATCTGTCCTGGAGAGTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR CCA 72 bp | ATTTGCCACTGTTTTATTCCTTTGACCCTTAGCATCTaGTCAATGGTATCTGGGAGAGGGACACCAAAGCTC | + |
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Preference number: 3 (lower is better) Translates to: ICHCFIPLTLSI*SMVSGRGTPKL Trigger: GAGCTTTGGTGTCCCTCTCCCAGATACCATTGACCAGATGCTAAGGGTCAAAGGAATAAAACAGTGGCAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR TCA 72 bp | TTGTCTGGCTTTGGATTTGCCACTGTTTTATTCCTTTaGCCCTTAGCATCTGGTCAATGGTATCTGGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: LSGFGFATVLFL*PLASGQWYLGE Trigger: CTCTCCCAGATACCATTGACCAGATGCTAAGGGTCAAAGGAATAAAACAGTGGCAAATCCAAAGCCAGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR GCA 72 bp | TCACCATCTTTTTGCATTCTTGTCTGGCTTTGGATTTaGCACTGTTTTATTCCTTTGACCCTTAGCATCTGG | + |
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Preference number: 3 (lower is better) Translates to: SPSFCILVWLWI*HCFIPLTLSIW Trigger: CCAGATGCTAAGGGTCAAAGGAATAAAACAGTGGCAAATCCAAAGCCAGACAAGAATGCAAAAAGATGGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR GCA 72 bp | CTCTTTAGGACTGTTGGGCTTTCTTCACCATCTTTTTaGATTCTTGTCTGGCTTTGGATTTGCCACTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: LFRTVGLSSPSF*ILVWLWICHCF Trigger: AAAACAGTGGCAAATCCAAAGCCAGACAAGAATGCAAAAAGATGGTGAAGAAAGCCCAACAGTCCTAAAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| 3UTR CCA 72 bp | CTTTCTTCACCATCTTTTTGCATTCTTGTCTGGCTTTaGATTTGCCACTGTTTTATTCCTTTGACCCTTAGC | + |
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Preference number: 3 (lower is better) Translates to: LSSPSFCILVWL*ICHCFIPLTLS Trigger: GCTAAGGGTCAAAGGAATAAAACAGTGGCAAATCCAAAGCCAGACAAGAATGCAAAAAGATGGTGAAGAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| CDS-3UTR GCA 90 bp | GAGATGAGCCATCGTGGGGACTCAGGGATGAACCACCAGAGAGCCCCACATAGCGGCACAAGGCAACGGTaGTCCGGGGTCCCCGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EMSHRGDSGMNHQRAPHSGTRQR*SGVPAR Trigger: CCTGGCGGGGACCCCGGAGCACCGTTGCCTTGTGCC...GCTATGTGGGGCTCTCTGGTGGTTCATCCCTGAGTCCCCACGATGGCTCATCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000136307.2 |
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| CDS-3UTR GCA 90 bp | TACCTGGCTGTGGGACTGAGCAGTCACAGTCAACACATTGTCTGCTTTATGGACGGCACAAGGCAACGGTaGTCCGGGGTCCCCGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: YLAVGLSSHSQHIVCFMDGTRQR*SGVPAR Trigger: CCTGGCGGGGACCCCGGAGCACCGTTGCCTTGTGCC...GTCCATAAAGCAGACAATGTGTTGACTGTGACTGCTCAGTCCCACAGCCAGGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR TCA 90 bp | GCTCTAGTGGCTAAGATTGGGAAGGCCTTGTATGGTGGTAACTGCACACCAGCCCTCAGGTTCACGGTGTaGGGCACAAGGCAACGGTGC | + |
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Preference number: 4 (lower is better) Translates to: ALVAKIGKALYGGNCTPALRFTV*GTRQRC Trigger: GCACCGTTGCCTTGTGCCTCACACCGTGAACCTGAG...GGCTGGTGTGCAGTTACCACCATACAAGGCCTTCCCAATCTTAGCCACTAGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR GCA 90 bp | AGCCTCCACCTTAGTCTCCTTTGGGCTCCCTCAGTCTTTGTTATGTCACGAGTTCGCCGGGGCAAGTACTaGAACAACAGCCAGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: SLHLSLLWAPSVFVMSRVRRGKY*NNSQAS Trigger: GCTGGCCTGGCTGTTGTTGCAGTACTTGCCCCGGCG...AACTCGTGACATAACAAAGACTGAGGGAGCCCAAAGGAGACTAAGGTGGAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR TCA 90 bp | TACCTGGCTGTGGGACTGAGCAGTCACAGTCAACACATTGTCTGCTTTATGGACAGACCTGCAGGAAGCTaGAGCCAGTCTGCATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: YLAVGLSSHSQHIVCFMDRPAGS*SQSACP Trigger: TGGGCATGCAGACTGGCTTCAGCTTCCTGCAGGTCT...GTCCATAAAGCAGACAATGTGTTGACTGTGACTGCTCAGTCCCACAGCCAGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR CCA 90 bp | GCTCTAGTGGCTAAGATTGGGAAGGCCTTGTATGGTGGTAACTGCACACCAGCCAGAGATGAGCCATCGTaGGGACTCAGGGATGAACCA | + |
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Preference number: 4 (lower is better) Translates to: ALVAKIGKALYGGNCTPARDEPS*GLRDEP Trigger: TGGTTCATCCCTGAGTCCCCACGATGGCTCATCTCT...GGCTGGTGTGCAGTTACCACCATACAAGGCCTTCCCAATCTTAGCCACTAGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR TCA 90 bp | ATCCCATTGATTTTGGCAGCTTTGCGGATGATCACCTCTGCCTCTTTAATTCGGCTCAGGTTCACGGTGTaGGGCACAAGGCAACGGTGC | + |
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Preference number: 4 (lower is better) Translates to: IPLILAALRMITSASLIRLRFTV*GTRQRC Trigger: GCACCGTTGCCTTGTGCCTCACACCGTGAACCTGAG...CCGAATTAAAGAGGCAGAGGTGATCATCCGCAAAGCTGCCAAAATCAATGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136307.2 |
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| CDS-3UTR CCA 90 bp | AGCCTCCACCTTAGTCTCCTTTGGGCTCCCTCAGTCTTTGTTATGTCACGAGTTCCCACTCTGTCACGATaGTGGACAGGAAGACGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SLHLSLLWAPSVFVMSRVPTLSR*WTGRRP Trigger: AGGACGTCTTCCTGTCCACCATCGTGACAGAGTGGG...AACTCGTGACATAACAAAGACTGAGGGAGCCCAAAGGAGACTAAGGTGGAGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR CCA 90 bp | GGAAGGCCCACATCCACCACTGTGATGGGACGTGCAAGCTGTTTGGTTAGCCTTTTAGCATCTGGTCAATaGTATCTGGGAGAGGGACAC | + |
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Preference number: 4 (lower is better) Translates to: GRPTSTTVMGRASCLVSLLASGQ*YLGEGH Trigger: GTGTCCCTCTCCCAGATACCATTGACCAGATGCTAA...AAGGCTAACCAAACAGCTTGCACGTCCCATCACAGTGGTGGATGTGGGCCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR CCA 90 bp | GGCAGCTTTGCGGATGATCACCTCTGCCTCTTTAATTCGGCCTTGAGAGATGAGGTTCCTCTGTCACGATaGTGGACAGGAAGACGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GSFADDHLCLFNSALRDEVPLSR*WTGRRP Trigger: AGGACGTCTTCCTGTCCACCATCGTGACAGAGGAAC...CTCATCTCTCAAGGCCGAATTAAAGAGGCAGAGGTGATCATCCGCAAAGCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136307.2 |
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| CDS-3UTR CCA 90 bp | TTCTTTGGAAGGCCCACATCCACCACTGTGATGGGACGTGCAAGCTGTTTGGTTCTGGTCAATGGTATCTaGGAGAGGGACACCAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: FFGRPTSTTVMGRASCLVLVNGI*ERDTKA Trigger: AGCTTTGGTGTCCCTCTCCCAGATACCATTGACCAG...AACCAAACAGCTTGCACGTCCCATCACAGTGGTGGATGTGGGCCTTCCAAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| 3UTR CAA 72 bp | TTTGCGGATGATCACCTCTGCCTCTTTAATTCGGCCTaGAGAGATGAGCCATCGTGGGGACTCAGGGATGAA | + |
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Preference number: 4 (lower is better) Translates to: FADDHLCLFNSA*RDEPSWGLRDE Trigger: TTCATCCCTGAGTCCCCACGATGGCTCATCTCTCAAGGCCGAATTAAAGAGGCAGAGGTGATCATCCGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136307.2 |
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| CDS-3UTR TCA 90 bp | CACCATGGCAACATAATCAGAAGAGAAGACAATCACACTGAACACAAAACACCCGGGATGCTGTGGAGCTaGCCCCCACACCCATGTTTC | + |
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Preference number: 4 (lower is better) Translates to: HHGNIIRREDNHTEHKTPGMLWS*PPHPCF Trigger: GAAACATGGGTGTGGGGGTCAGCTCCACAGCATCCC...GGGTGTTTTGTGTTCAGTGTGATTGTCTTCTCTTCTGATTATGTTGCCATGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR GCA 90 bp | GGAAGGCCCACATCCACCACTGTGATGGGACGTGCAAGCTGTTTGGTTAGCCTTAAAACAGCACATTCTTaGGACCAAACCTGTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: GRPTSTTVMGRASCLVSLKTAHS*DQTCLR Trigger: TCTCAGACAGGTTTGGTCGCAAGAATGTGCTGTTTT...AAGGCTAACCAAACAGCTTGCACGTCCCATCACAGTGGTGGATGTGGGCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR GCA 90 bp | TACCTGGCTGTGGGACTGAGCAGTCACAGTCAACACATTGTCTGCTTTATGGACTCTGAAGGCACCAGCTaGATGAAGAGAAGGACACTG | + |
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Preference number: 4 (lower is better) Translates to: YLAVGLSSHSQHIVCFMDSEGTS*MKRRTL Trigger: CAGTGTCCTTCTCTTCATGCAGCTGGTGCCTTCAGA...GTCCATAAAGCAGACAATGTGTTGACTGTGACTGCTCAGTCCCACAGCCAGGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR TCA 90 bp | AAAGAAATTTTTGTTTCCTTCTGGTGCATCCTAGACAAGCACACTGCCCCTGAGAGAGCTGTCCTGAAATaGAGGAGCCCATCAGCACAC | + |
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Preference number: 4 (lower is better) Translates to: KEIFVSFWCILDKHTAPERAVLK*RSPSAH Trigger: GTGTGCTGATGGGCTCCTTCATTTCAGGACAGCTCT...CTCAGGGGCAGTGTGCTTGTCTAGGATGCACCAGAAGGAAACAAAAATTTCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR CCA 90 bp | GGTGACTCTCCAGGACAGATGCCCCAATCCATGAGCATGTTAGACACAAGGTTACAGTCTGCATGCCCATaGTCAAAAACAGCACATTCT | + |
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Preference number: 4 (lower is better) Translates to: GDSPGQMPQSMSMLDTRLQSACP*SKTAHS Trigger: AGAATGTGCTGTTTTTGACCATGGGCATGCAGACTG...TAACCTTGTGTCTAACATGCTCATGGATTGGGGCATCTGTCCTGGAGAGTCACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR TCA 90 bp | CAGATGCCCCAATCCATGAGCATGTTAGACACAAGGTTAACAGAACAGAAAAGCAAAACAAGGAGGTGGTaGGTGGGGCTTTCCAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: QMPQSMSMLDTRLTEQKSKTRRW*VGLSSH Trigger: ATGACTGGAAAGCCCCACTCACCACCTCCTTGTTTT...GCTTTTCTGTTCTGTTAACCTTGTGTCTAACATGCTCATGGATTGGGGCATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR TCA 90 bp | GAGAGGGAAGGGACACTCTGTTATCCATACATTTCCTTCAAGACACAGATAAGTTGGAGTAGGCAGAGGTaGTTCCAAACTTCCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: EREGTLCYPYISFKTQISWSRQR*FQTSPP Trigger: TGGTGGGGAAGTTTGGAATCACCTCTGCCTACTCCA...ACTTATCTGTGTCTTGAAGGAAATGTATGGATAACAGAGTGTCCCTTCCCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR GCA 90 bp | CTTTCGGAGCACCATGGCAACATAATCAGAAGAGAAGACAATCACACTGAACACTCCCAGGACAAATGCTaGCACGTAGTTGGAGATCTG | + |
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Preference number: 4 (lower is better) Translates to: LSEHHGNIIRREDNHTEHSQDKC*HVVGDL Trigger: CAGATCTCCAACTACGTGGCAGCATTTGTCCTGGGA...GTGTTCAGTGTGATTGTCTTCTCTTCTGATTATGTTGCCATGGTGCTCCGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR GCA 90 bp | TTCTTTGGAAGGCCCACATCCACCACTGTGATGGGACGTGCAAGCTGTTTGGTTCAAACGCATAAAATATaGAAACTCCTAAGGTGGCGA | + |
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Preference number: 4 (lower is better) Translates to: FFGRPTSTTVMGRASCLVQTHKI*KLLRWR Trigger: TCGCCACCTTAGGAGTTTGCATATTTTATGCGTTTG...AACCAAACAGCTTGCACGTCCCATCACAGTGGTGGATGTGGGCCTTCCAAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR CCA 90 bp | GAGGAAGGTGACTCTCCAGGACAGATGCCCCAATCCATGAGCATGTTAGACACATTTTGCATTCTTGTCTaGCTTTGGATTTGCCACTGT | + |
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Preference number: 4 (lower is better) Translates to: EEGDSPGQMPQSMSMLDTFCILV*LWICHC Trigger: ACAGTGGCAAATCCAAAGCCAGACAAGAATGCAAAA...TGTGTCTAACATGCTCATGGATTGGGGCATCTGTCCTGGAGAGTCACCTTCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| 3UTR CAA 72 bp | CAGAATTTTGATTTACACAGCAGTGGAAGACAAGCCTaGGCCTCAACAGTAGATTTCTCACAGGGCCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: QNFDLHSSGRQA*ASTVDFSQGLD Trigger: GTCCAGGCCCTGTGAGAAATCTACTGTTGAGGCCAAGGCTTGTCTTCCACTGCTGTGTAAATCAAAATTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| 3UTR CAA 72 bp | CTTCAAGACACAGATAAGTGGCTGGCAGCCAGAATTTaGATTTACACAGCAGTGGAAGACAAGCCTTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: LQDTDKWLAARI*IYTAVEDKPWP Trigger: AGGCCAAGGCTTGTCTTCCACTGCTGTGTAAATCAAAATTCTGGCTGCCAGCCACTTATCTGTGTCTTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR TCA 90 bp | CTTTCGGAGCACCATGGCAACATAATCAGAAGAGAAGACAATCACACTGAACACGTGCAACAATCCCATTaGTTTTGGCAGCTTTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: LSEHHGNIIRREDNHTEHVQQSH*FWQLCG Trigger: TCCGCAAAGCTGCCAAAATCAATGGGATTGTTGCAC...GTGTTCAGTGTGATTGTCTTCTCTTCTGATTATGTTGCCATGGTGCTCCGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR TCA 90 bp | GGTGACTCTCCAGGACAGATGCCCCAATCCATGAGCATGTTAGACACAAGGTTAACTGTTTTATTCCTTTaGCCCTTAGCATCTGGTCAA | + |
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Preference number: 4 (lower is better) Translates to: GDSPGQMPQSMSMLDTRLTVLFL*PLASGQ Trigger: TTGACCAGATGCTAAGGGTCAAAGGAATAAAACAGT...TAACCTTGTGTCTAACATGCTCATGGATTGGGGCATCTGTCCTGGAGAGTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR GCA 90 bp | AGCATGTTAGACACAAGGTTAACAGAACAGAAAAGCCCTCAGTCATGGAGAGCATGTTCCCAGGACAAATaGTGCCACGTAGTTGGAGAT | + |
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Preference number: 4 (lower is better) Translates to: SMLDTRLTEQKSPQSWRACSQDK*CHVVGD Trigger: ATCTCCAACTACGTGGCAGCATTTGTCCTGGGAACA...TGCTCTCCATGACTGAGGGCTTTTCTGTTCTGTTAACCTTGTGTCTAACATGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| 3UTR CAA 72 bp | GCCTCCACCTTAGTCTCCTTTGGGCTCCCTCAGTCTTaGTTATGTCACGAGTTAAGAGTGTTGCAGTTAAAA | + |
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Preference number: 4 (lower is better) Translates to: ASTLVSFGLPQS*LCHELRVLQLK Trigger: TTTTAACTGCAACACTCTTAACTCGTGACATAACAAAGACTGAGGGAGCCCAAAGGAGACTAAGGTGGAGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR TCA 90 bp | ATGAGCATGTTAGACACAAGGTTAACAGAACAGAAAAGCCCTCAGTCATGGAGATGGTCAGACTTCCCATaGGAATATAAGGCAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: MSMLDTRLTEQKSPQSWRWSDFP*EYKAGS Trigger: GCTTCCTGCCTTATATTCTCATGGGAAGTCTGACCA...TCTCCATGACTGAGGGCTTTTCTGTTCTGTTAACCTTGTGTCTAACATGCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR GCA 90 bp | CACCATGGCAACATAATCAGAAGAGAAGACAATCACACTGAACACAAAACACCCAAGCTGAAGCCAGTCTaGATGCCCATGGTCAAAAAC | + |
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Preference number: 4 (lower is better) Translates to: HHGNIIRREDNHTEHKTPKLKPV*MPMVKN Trigger: GTTTTTGACCATGGGCATGCAGACTGGCTTCAGCTT...GGGTGTTTTGTGTTCAGTGTGATTGTCTTCTCTTCTGATTATGTTGCCATGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| 3UTR CAA 72 bp | CTTGTCTGGCTTTGGATTTGCCACTGTTTTATTCCTTaGACCCTTAGCATCTGGTCAATGGTATCTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LVWLWICHCFIP*TLSIWSMVSGR Trigger: TCTCCCAGATACCATTGACCAGATGCTAAGGGTCAAAGGAATAAAACAGTGGCAAATCCAAAGCCAGACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| CDS-3UTR TCA 90 bp | AAAGAAATTTTTGTTTCCTTCTGGTGCATCCTAGACAAGCACACTGCCCCTGAGCAAGTAAAACAATTCTaGAGGCACCAGCTGCATGAA | + |
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Preference number: 4 (lower is better) Translates to: KEIFVSFWCILDKHTAPEQVKQF*RHQLHE Trigger: TTCATGCAGCTGGTGCCTTCAGAATTGTTTTACTTG...CTCAGGGGCAGTGTGCTTGTCTAGGATGCACCAGAAGGAAACAAAAATTTCTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR CCA 90 bp | CACCATGGCAACATAATCAGAAGAGAAGACAATCACACTGAACACAAAACACCCGAAGTATGCAAACAGTaGCAGCACCATGAAGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: HHGNIIRREDNHTEHKTPEVCKQ*QHHEAK Trigger: TTTGGCTTCATGGTGCTGCCACTGTTTGCATACTTC...GGGTGTTTTGTGTTCAGTGTGATTGTCTTCTCTTCTGATTATGTTGCCATGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| 3UTR CAA 72 bp | GGACTGTTGGGCTTTCTTCACCATCTTTTTGCATTCTaGTCTGGCTTTGGATTTGCCACTGTTTTATTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GLLGFLHHLFAF*SGFGFATVLFL Trigger: AAGGAATAAAACAGTGGCAAATCCAAAGCCAGACAAGAATGCAAAAAGATGGTGAAGAAAGCCCAACAGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152084.2 |
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| CDS-3UTR GCA 90 bp | GAGAGGGAAGGGACACTCTGTTATCCATACATTTCCTTCAAGACACAGATAAGTGTCTGGCTTTGGATTTaGCACTGTTTTATTCCTTTG | + |
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Preference number: 4 (lower is better) Translates to: EREGTLCYPYISFKTQISVWLWI*HCFIPL Trigger: CAAAGGAATAAAACAGTGGCAAATCCAAAGCCAGAC...ACTTATCTGTGTCTTGAAGGAAATGTATGGATAACAGAGTGTCCCTTCCCTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| 3UTR CAA 72 bp | TACATCGTAAAAGGAAGAAGCATAGTGTTATTATTTTaGGCACTCAGAGCAGCTCTAGTGGCTAAGATTGGG | + |
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Preference number: 4 (lower is better) Translates to: YIVKGRSIVLLF*ALRAALVAKIG Trigger: CCCAATCTTAGCCACTAGAGCTGCTCTGAGTGCCAAAAATAATAACACTATGCTTCTTCCTTTTACGATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS GCA 90 bp | TCCTTGTCGTACTCCCAGCCATCCAGGCAGCTCTCCTGCTCCAGCTaGTCCAGGTCCACGTCCCGCCCCGGCTCCAGCCCTAGCTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SLSYSQPSRQLSCSS*SRSTSRPGSSPSSE Trigger: CTCTGAGCTAGGGCTGGAGCCGGGGCGGGACGTGGACCTGGAGCAGCTGGAGCAGGAGAGCTGCCTGGATGGCTGGGAGTACGACAAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019044.8 ENSMUST00000136307.2 |
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| CDS-3UTR CAA 90 bp | TTGAGAGATGAGCCATCGTGGGGACTCAGGGATGAACCACCAGAGAGCCCCACAACGATGGACATACCATaGAAGCCATTGGGGATGATG | + |
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Preference number: 5 (lower is better) Translates to: LRDEPSWGLRDEPPESPTTMDIP*KPLGMM Trigger: CATCATCCCCAATGGCTTCAATGGTATGTCCATCGT...TGTGGGGCTCTCTGGTGGTTCATCCCTGAGTCCCCACGATGGCTCATCTCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136307.2 |
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| CDS-3UTR CAA 90 bp | GGAAGGCCCACATCCACCACTGTGATGGGACGTGCAAGCTGTTTGGTTAGCCTTCACTGTTTTATTCCTTaGACCCTTAGCATCTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: GRPTSTTVMGRASCLVSLHCFIP*TLSIWS Trigger: TGACCAGATGCTAAGGGTCAAAGGAATAAAACAGTG...AAGGCTAACCAAACAGCTTGCACGTCCCATCACAGTGGTGGATGTGGGCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR CAA 90 bp | CTGGCTGTGGGACTGAGCAGTCACAGTCAACACATTGTCTGCTTTATGGACCAGAAAAACAGCACATTCTaGCGACCAAACCTGTCTGAG | + |
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Preference number: 5 (lower is better) Translates to: LAVGLSSHSQHIVCFMDQKNSTF*RPNLSE Trigger: CTCAGACAGGTTTGGTCGCAAGAATGTGCTGTTTTT...CTGGTCCATAAAGCAGACAATGTGTTGACTGTGACTGCTCAGTCCCACAGCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR CAA 90 bp | GAGGAAGGTGACTCTCCAGGACAGATGCCCCAATCCATGAGCATGTTAGACACACATCTTTTTGCATTCTaGTCTGGCTTTGGATTTGCC | + |
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Preference number: 5 (lower is better) Translates to: EEGDSPGQMPQSMSMLDTHLFAF*SGFGFA Trigger: GGCAAATCCAAAGCCAGACAAGAATGCAAAAAGATG...TGTGTCTAACATGCTCATGGATTGGGGCATCTGTCCTGGAGAGTCACCTTCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR CAA 90 bp | CACCATGGCAACATAATCAGAAGAGAAGACAATCACACTGAACACAAAACACCCACGATGGACATACCATaGAAGCCATTGGGGATGATG | + |
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Preference number: 5 (lower is better) Translates to: HHGNIIRREDNHTEHKTPTMDIP*KPLGMM Trigger: CATCATCCCCAATGGCTTCAATGGTATGTCCATCGT...GGGTGTTTTGTGTTCAGTGTGATTGTCTTCTCTTCTGATTATGTTGCCATGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS-3UTR CAA 90 bp | CAGATGCCCCAATCCATGAGCATGTTAGACACAAGGTTAACAGAACAGAAAAGCTGTCTGGCTTTGGATTaGCCACTGTTTTATTCCTTT | + |
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Preference number: 5 (lower is better) Translates to: QMPQSMSMLDTRLTEQKSCLALD*PLFYSF Trigger: AAAGGAATAAAACAGTGGCAAATCCAAAGCCAGACA...GCTTTTCTGTTCTGTTAACCTTGTGTCTAACATGCTCATGGATTGGGGCATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS GCA 72 bp | TCGTCTCCAACGGGATACTGTGGTTGCGCCACGCGCTaGTCAGGTTCACGGTGTGAGGCACAAGGCAACGGT | + |
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Preference number: 6 (lower is better) Translates to: SSPTGYCGCATR*SGSRCEAQGNG Trigger: ACCGTTGCCTTGTGCCTCACACCGTGAACCTGAGCAGCGCGTGGCGCAACCACAGTATCCCGTTGGAGACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019044.8 ENSMUST00000136307.2 |
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| CDS CAA 72 bp | CCAGTCTGCATGCCCATGGTCAAAAACAGCACATTCTaGCGACCAAACCTGTCTGAGAGCTGTCCTGAAATG | + |
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Preference number: 6 (lower is better) Translates to: PVCMPMVKNSTF*RPNLSESCPEM Trigger: CATTTCAGGACAGCTCTCAGACAGGTTTGGTCGCAAGAATGTGCTGTTTTTGACCATGGGCATGCAGACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS CAA 90 bp | TCACTTGGATCGAAGATAGTGGAAGGTGCAACAATCCCATTGATTTaGGCAGCTTTGCGGATGATCACCTCTGCCTCTTTAATTCGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLGSKIVEGATIPLI*AALRMITSASLIRP Trigger: AGGCCGAATTAAAGAGGCAGAGGTGATCATCCGCAAAGCTGCCAAAATCAATGGGATTGTTGCACCTTCCACTATCTTCGATCCAAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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| CDS CCA 72 bp | GAATTTCTGTTCCCAGGACAAATGCTGCCACGTAGTTaGAGATCTGACCCATGCCAACAAGGACAAAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: EFLFPGQMLPRS*RSDPCQQGQKA Trigger: TGCTTTTTGTCCTTGTTGGCATGGGTCAGATCTCCAACTACGTGGCAGCATTTGTCCTGGGAACAGAAATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019044.8 |
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