Pregenerated sensors for SLC22A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020334Ensembl transcript IDs: ENSMUST00000020586.7
Found 66 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCCTaGTCATTGTATACATCTGCTTTTCAGTTTGCCAAGTGCCTTGGA | + |
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Preference number: 1 (lower is better) Translates to: STPRALGLQACSITP*SLYTSAFQFAKCLG Trigger: TCCAAGGCACTTGGCAAACTGAAAAGCAGATGTATACAATGAGCAGGGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| 3UTR CAA 90 bp | CCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCCTGCTCATaGTATACATCTGCTTTTCAGTTTGCCAAGTGCCTTGGAAACCTC | + |
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Preference number: 2 (lower is better) Translates to: PRALGLQACSITPCS*YTSAFQFAKCLGNL Trigger: GAGGTTTCCAAGGCACTTGGCAAACTGAAAAGCAGATGTATACAATGAGCAGGGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| 3UTR-3UTR TCA 90 bp | TCCACAAGTCCAGTTTGGTGCTCATTGTTTCTGTTAATCCCTTTCAGCAGAAAAATGACCTTGAACTCCTaGTCTTCTGTCTCCACCCCA | + |
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Preference number: 2 (lower is better) Translates to: STSPVWCSLFLLIPFSRKMTLNS*SSVSTP Trigger: TGGGGTGGAGACAGAAGATCAGGAGTTCAAGGTCAT...TTTTCTGCTGAAAGGGATTAACAGAAACAATGAGCACCAAACTGGACTTGTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| 3UTR CAA 90 bp | TTGGTGCTCATTGTTTCTGTTAATCCCTTTCAGCAGAAAAGGCTTTaGATTTGTTCTGTTGAGACAGGGTTGCTTGTGGTAAGACAGGCT | + |
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Preference number: 2 (lower is better) Translates to: LVLIVSVNPFQQKRL*ICSVETGLLVVRQA Trigger: AGCCTGTCTTACCACAAGCAACCCTGTCTCAACAGAACAAATCAAAAGCCTTTTCTGCTGAAAGGGATTAACAGAAACAATGAGCACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| 3UTR TCA 72 bp | AAAACAAGGCCATCTGGAAGAGTGGCCCAGAATTCATaGGATAGTGTGCATTTCTCCACAAGTCCAGTTTGG | + |
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Preference number: 3 (lower is better) Translates to: KTRPSGRVAQNS*DSVHFSTSPVW Trigger: CCAAACTGGACTTGTGGAGAAATGCACACTATCTCATGAATTCTGGGCCACTCTTCCAGATGGCCTTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR TCA 90 bp | TCTGTCTCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCCTGCCGAAATAGGGGGCAATaGTGCTGCCCACCCGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: SVSTPRALGLQACSITPCRNRGQ*CCPPER Trigger: CCTCTCGGGTGGGCAGCATCATTGCCCCCTATTTCG...GCAGGGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGAGACAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR GCA 90 bp | CTGTCTCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCCTGCTAGGGGATGCTGTGGTTaGGCCAGGAGCTGCTCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LSPPQERWDCRLALSHPARGCCG*ARSCSG Trigger: ACCTGAGCAGCTCCTGGCGCAACCACAGCATCCCCT...AGCAGGGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGAGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR TCA 90 bp | TCTTCTGTCTCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCCCCTGCCAAACCTGTCTaGCAGCTGCCCAGACACGAA | + |
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Preference number: 4 (lower is better) Translates to: SSVSTPRALGLQACSITPPAKPV*QLPRHE Trigger: TTCGTGTCTGGGCAGCTGTCAGACAGGTTTGGCAGG...GGGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGAGACAGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR GCA 90 bp | TCTTCTGTCTCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCCGGTTGCGCCAGGAGCTaGTCAGGTTCACAGTGTCAG | + |
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Preference number: 4 (lower is better) Translates to: SSVSTPRALGLQACSITPGCARS*SGSQCQ Trigger: CTGACACTGTGAACCTGAGCAGCTCCTGGCGCAACC...GGGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGAGACAGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR CCA 90 bp | TCTGTCTCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCCTGCGTTCCTGACCAGGGTTaGGTAGAGCTCCGCAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: SVSTPRALGLQACSITPCVPDQG*VELRSE Trigger: TTCACTGCGGAGCTCTACCCAACCCTGGTCAGGAAC...GCAGGGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGAGACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR TCA 90 bp | ATCTTCTGTCTCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCCCACAGCCATGTTCCTaGCCAGGGTTGGGTAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: IFCLHPKSAGIAGLLYHTPQPCS*PGLGRA Trigger: AGCTCTACCCAACCCTGGTCAGGAACATGGCTGTGG...GGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGAGACAGAAGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR CCA 90 bp | GTAGCCAAGGATGACCTTGAACTCCTGATCTTCTGTCTCCACCCCAAGAGCGCTTCCAAGGGGATGCTGTaGTTGCGCCAGGAGCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: VAKDDLELLIFCLHPKSASKGML*LRQELL Trigger: GAGCAGCTCCTGGCGCAACCACAGCATCCCCTTGGA...AGCGCTCTTGGGGTGGAGACAGAAGATCAGGAGTTCAAGGTCATCCTTGGCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR TCA 90 bp | CTGTCTCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCCTGCTGTAGCAGCCAGGCTGTaGAGTAAGCTGGAACTTCAA | + |
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Preference number: 4 (lower is better) Translates to: LSPPQERWDCRLALSHPAVAARL*SKLELQ Trigger: TTGAAGTTCCAGCTTACTTCACAGCCTGGCTGCTAC...AGCAGGGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGAGACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR GCA 90 bp | CTGTCTCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCCTGCTGATCTGTTCGGCCTCTaGAAATCTCCTCTGGGATAT | + |
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Preference number: 4 (lower is better) Translates to: LSPPQERWDCRLALSHPADLFGL*KSPLGY Trigger: ATATCCCAGAGGAGATTTGCAGAGGCCGAACAGATC...AGCAGGGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGAGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR TCA 90 bp | TCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCCTGCTCATTGACAGGTCCAGGATTATaGCTTTCTGCTGCTTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: STPRALGLQACSITPCSLTGPGL*LSAASR Trigger: CCTTGAAGCAGCAGAAAGTCATAATCCTGGACCTGT...CAATGAGCAGGGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR GCA 90 bp | TCTTCTGTCTCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCCGTCTCTGATGAAGTATaGAAACAGCGGCAGGACCAT | + |
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Preference number: 4 (lower is better) Translates to: SSVSTPRALGLQACSITPVSDEV*KQRQDH Trigger: ATGGTCCTGCCGCTGTTTGCATACTTCATCAGAGAC...GGGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGAGACAGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR GCA 90 bp | CTGTCTCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCCTGCTCTCACTTTCTGCATCTaGTCCAAGTTCTCTGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSPPQERWDCRLALSHPALTFCI*SKFSGR Trigger: TCTACCAGAGAACTTGGAGCAGATGCAGAAAGTGAG...AGCAGGGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| 3UTR CAA 72 bp | TTCTGTCTCCACCCCAAGAGCGCTGGGATTGCAGGCTaGCTCTATCACACCCTGCTCATTGTATACATCTGC | + |
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Preference number: 4 (lower is better) Translates to: FCLHPKSAGIAG*LYHTLLIVYIC Trigger: GCAGATGTATACAATGAGCAGGGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGAGACAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR TCA 90 bp | GTAGCCAAGGATGACCTTGAACTCCTGATCTTCTGTCTCCACCCCAAGAGCGCTCGCCAGGAACACGACTaGCATACCATTGAAGCCATT | + |
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Preference number: 4 (lower is better) Translates to: VAKDDLELLIFCLHPKSARQEHD*HTIEAI Trigger: AATGGCTTCAATGGTATGTCAGTCGTGTTCCTGGCG...AGCGCTCTTGGGGTGGAGACAGAAGATCAGGAGTTCAAGGTCATCCTTGGCTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR TCA 90 bp | GATCTTCTGTCTCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCATCTCCCAGTTGGTTaGGAAAATCTGCACGAAGCT | + |
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Preference number: 4 (lower is better) Translates to: DLLSPPQERWDCRLALSHHLPVG*ENLHEA Trigger: AGCTTCGTGCAGATTTTCTCAACCAACTGGGAGATG...GTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGAGACAGAAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR TCA 90 bp | ATCTTCTGTCTCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCTGGCAAACAACACAGTaGACATCTCCCAGTTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: IFCLHPKSAGIAGLLYHTWQTTQ*TSPSWL Trigger: CAACCAACTGGGAGATGTTCACTGTGTTGTTTGCCA...GGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGAGACAGAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR GCA 90 bp | ATCTTCTGTCTCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCAGAGGACTTTCTTCCTaGCAAACCTGTCTGACAGCT | + |
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Preference number: 4 (lower is better) Translates to: IFCLHPKSAGIAGLLYHTRGLSS*QTCLTA Trigger: AGCTGTCAGACAGGTTTGGCAGGAAGAAAGTCCTCT...GGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGAGACAGAAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR GCA 90 bp | GATCTTCTGTCTCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACAAGCTGAATCCAGTCTaGACAGCCATGGTTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: DLLSPPQERWDCRLALSHKLNPV*TAMVAK Trigger: CTTTGCAACCATGGCTGTGCAGACTGGATTCAGCTT...GTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGAGACAGAAGATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR GCA 90 bp | TGCAGGCTTGCTCTATCACACCCTGCTCATTGTATACATCTGCTTTTCAGTTTGTCCAGGCAGCTCTCCTaGTCCAGCTGCTCCAGATCC | + |
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Preference number: 4 (lower is better) Translates to: CRLALSHPAHCIHLLFSLSRQLS*SSCSRS Trigger: GGATCTGGAGCAGCTGGAGCAGGAGAGCTGCCTGGA...CAAACTGAAAAGCAGATGTATACAATGAGCAGGGTGTGATAGAGCAAGCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR CCA 90 bp | TGCAGGCTTGCTCTATCACACCCTGCTCATTGTATACATCTGCTTTTCAGTTTGATCCACGTCCTGTCCTaGCTCCAGCCCCATCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: CRLALSHPAHCIHLLFSLIHVLS*LQPHRR Trigger: TCTGCGATGGGGCTGGAGCCAGGACAGGACGTGGAT...CAAACTGAAAAGCAGATGTATACAATGAGCAGGGTGTGATAGAGCAAGCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR CCA 90 bp | GCAGGCTTGCTCTATCACACCCTGCTCATTGTATACATCTGCTTTTCAGTTTGCCCACCGGGGAGATTCTaGAATAAACCACCACAGGGG | + |
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Preference number: 4 (lower is better) Translates to: AGLLYHTLLIVYICFSVCPPGRF*NKPPQG Trigger: CCCCTGTGGTGGTTTATTCCAGAATCTCCCCGGTGG...GCAAACTGAAAAGCAGATGTATACAATGAGCAGGGTGTGATAGAGCAAGCCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR GCA 90 bp | TTTCAGCAGAAAAGGCTTTTGATTTGTTCTGTTGAGACAGGGTTGCTTGTGGTATCGTCTCCAAGGGGATaGTGTGGTTGCGCCAGGAGC | + |
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Preference number: 4 (lower is better) Translates to: FQQKRLLICSVETGLLVVSSPRG*CGCARS Trigger: GCTCCTGGCGCAACCACAGCATCCCCTTGGAGACGA...TACCACAAGCAACCCTGTCTCAACAGAACAAATCAAAAGCCTTTTCTGCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR CCA 90 bp | TCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCCTGCTCATTGGCATCACCAGTCCAATaGACACAAAGTTATAATCTT | + |
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Preference number: 4 (lower is better) Translates to: STPRALGLQACSITPCSLASPVQ*TQSYNL Trigger: AAGATTATAACTTTGTGTCCATTGGACTGGTGATGC...CAATGAGCAGGGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR CCA 90 bp | GATGACCTTGAACTCCTGATCTTCTGTCTCCACCCCAAGAGCGCTGGGATTGCACAGTTATTAGAACCTTaGGGCTTTCTTCTCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: DDLELLIFCLHPKSAGIAQLLEP*GFLLCP Trigger: TGGACAGAGAAGAAAGCCCCAAGGTTCTAATAACTG...TGCAATCCCAGCGCTCTTGGGGTGGAGACAGAAGATCAGGAGTTCAAGGTCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR CCA 90 bp | TTTCTCCACAAGTCCAGTTTGGTGCTCATTGTTTCTGTTAATCCCTTTCAGCAGTCTGCAAATCTCCTCTaGGATATCAGCCACCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: FLHKSSLVLIVSVNPFQQSANLL*DISHRG Trigger: TCCCCGGTGGCTGATATCCCAGAGGAGATTTGCAGA...CTGCTGAAAGGGATTAACAGAAACAATGAGCACCAAACTGGACTTGTGGAGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| 3UTR CAA 72 bp | CTGGGATTGCAGGCTTGCTCTATCACACCCTGCTCATaGTATACATCTGCTTTTCAGTTTGCCAAGTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: LGLQACSITPCS*YTSAFQFAKCL Trigger: AAGGCACTTGGCAAACTGAAAAGCAGATGTATACAATGAGCAGGGTGTGATAGAGCAAGCCTGCAATCCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR GCA 90 bp | TGCAGGCTTGCTCTATCACACCCTGCTCATTGTATACATCTGCTTTTCAGTTTGCTGCACAGCCATGGTTaGAAAGAGGACTTTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: CRLALSHPAHCIHLLFSLLHSHG*KEDFLP Trigger: AGGAAGAAAGTCCTCTTTGCAACCATGGCTGTGCAG...CAAACTGAAAAGCAGATGTATACAATGAGCAGGGTGTGATAGAGCAAGCCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR GCA 90 bp | TTTCTCCACAAGTCCAGTTTGGTGCTCATTGTTTCTGTTAATCCCTTTCAGCAGGATGCTGTTCATCTTTaGGGCTTTCTGGATGATCTG | + |
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Preference number: 4 (lower is better) Translates to: FLHKSSLVLIVSVNPFQQDAVHL*GFLDDL Trigger: CAGATCATCCAGAAAGCCGCAAAGATGAACAGCATC...CTGCTGAAAGGGATTAACAGAAACAATGAGCACCAAACTGGACTTGTGGAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR GCA 90 bp | TTTCAGCAGAAAAGGCTTTTGATTTGTTCTGTTGAGACAGGGTTGCTTGTGGTAAACCCTCTCACTTTCTaGATCTGCTCCAAGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: FQQKRLLICSVETGLLVVNPLTF*ICSKFS Trigger: AGAGAACTTGGAGCAGATGCAGAAAGTGAGAGGGTT...TACCACAAGCAACCCTGTCTCAACAGAACAAATCAAAAGCCTTTTCTGCTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR CCA 90 bp | GTTAATCCCTTTCAGCAGAAAAGGCTTTTGATTTGTTCTGTTGAGACAGGGTTGTCTTCAGGTACCACTTaGATCAAGAGAAGCACACCT | + |
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Preference number: 4 (lower is better) Translates to: VNPFQQKRLLICSVETGLSSGTT*IKRSTP Trigger: AGGTGTGCTTCTCTTGATCCAAGTGGTACCTGAAGA...CAACCCTGTCTCAACAGAACAAATCAAAAGCCTTTTCTGCTGAAAGGGATTAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS GCA 90 bp | TCCTTGTCGTACTCCCAGCCATCCAGGCAGCTCTCCTGCTCCAGCTaGTCCAGATCCACGTCCTGTCCTGGCTCCAGCCCCATCGCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SLSYSQPSRQLSCSS*SRSTSCPGSSPIAE Trigger: CTCTGCGATGGGGCTGGAGCCAGGACAGGACGTGGATCTGGAGCAGCTGGAGCAGGAGAGCTGCCTGGATGGCTGGGAGTACGACAAGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR CAA 90 bp | TCTGTCTCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCCTGCCCCATCGCAGAGAAGTaGGCGATGGTGGCCAGTCGG | + |
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Preference number: 5 (lower is better) Translates to: SVSTPRALGLQACSITPCPIAEK*AMVASR Trigger: CCGACTGGCCACCATCGCCAACTTCTCTGCGATGGG...GCAGGGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGAGACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS TCA 90 bp | TCCCTGCTGGCGCCACGATGCTGTTCATCTTTGCGGCTTTCTGGATaGTCTGTTCGGCCTCTGCAAATCTCCTCTGGGATATCAGCCACC | + |
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Preference number: 5 (lower is better) Translates to: SLLAPRCCSSLRLSG*SVRPLQISSGISAT Trigger: GGTGGCTGATATCCCAGAGGAGATTTGCAGAGGCCGAACAGATCATCCAGAAAGCCGCAAAGATGAACAGCATCGTGGCGCCAGCAGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS CCA 90 bp | GGCCTCTGCAAATCTCCTCTGGGATATCAGCCACCGGGGAGATTCTaGAATAAACCACCACAGGGGAACACAGAACAGGCCAGGCAGTGT | + |
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Preference number: 5 (lower is better) Translates to: GLCKSPLGYQPPGRF*NKPPQGNTEQARQC Trigger: ACACTGCCTGGCCTGTTCTGTGTTCCCCTGTGGTGGTTTATTCCAGAATCTCCCCGGTGGCTGATATCCCAGAGGAGATTTGCAGAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR CAA 90 bp | TCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCCTGCTCATTGTCTGCACAGCCATGGTaGCAAAGAGGACTTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: STPRALGLQACSITPCSLSAQPW*QRGLSS Trigger: GGAAGAAAGTCCTCTTTGCAACCATGGCTGTGCAGA...CAATGAGCAGGGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR CAA 90 bp | TTCTGTCTCCACCCCAAGAGCGCTGGGATTGCAGGCTTGCTCTATCACACCCTGACGACTGACATACCATaGAAGCCATTGGGGATGATG | + |
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Preference number: 5 (lower is better) Translates to: FCLHPKSAGIAGLLYHTLTTDIP*KPLGMM Trigger: CATCATCCCCAATGGCTTCAATGGTATGTCAGTCGT...CAGGGTGTGATAGAGCAAGCCTGCAATCCCAGCGCTCTTGGGGTGGAGACAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS CCA 90 bp | TTTGCGGCTTTCTGGATGATCTGTTCGGCCTCTGCAAATCTCCTCTaGGATATCAGCCACCGGGGAGATTCTGGAATAAACCACCACAGG | + |
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Preference number: 5 (lower is better) Translates to: FAAFWMICSASANLL*DISHRGDSGINHHR Trigger: CCTGTGGTGGTTTATTCCAGAATCTCCCCGGTGGCTGATATCCCAGAGGAGATTTGCAGAGGCCGAACAGATCATCCAGAAAGCCGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS CCA 90 bp | AATATCCCTGCTGGCGCCACGATGCTGTTCATCTTTGCGGCTTTCTaGATGATCTGTTCGGCCTCTGCAAATCTCCTCTGGGATATCAGC | + |
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Preference number: 5 (lower is better) Translates to: NIPAGATMLFIFAAF*MICSASANLLWDIS Trigger: GCTGATATCCCAGAGGAGATTTGCAGAGGCCGAACAGATCATCCAGAAAGCCGCAAAGATGAACAGCATCGTGGCGCCAGCAGGGATATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR CAA 90 bp | TGCAGGCTTGCTCTATCACACCCTGCTCATTGTATACATCTGCTTTTCAGTTTGAAGGGGATGCTGTGGTaGCGCCAGGAGCTGCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: CRLALSHPAHCIHLLFSLKGMLW*RQELLR Trigger: CCTGAGCAGCTCCTGGCGCAACCACAGCATCCCCTT...CAAACTGAAAAGCAGATGTATACAATGAGCAGGGTGTGATAGAGCAAGCCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS GCA 90 bp | GATGCTGTTCATCTTTGCGGCTTTCTGGATGATCTGTTCGGCCTCTaGAAATCTCCTCTGGGATATCAGCCACCGGGGAGATTCTGGAAT | + |
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Preference number: 5 (lower is better) Translates to: DAVHLCGFLDDLFGL*KSPLGYQPPGRFWN Trigger: ATTCCAGAATCTCCCCGGTGGCTGATATCCCAGAGGAGATTTGCAGAGGCCGAACAGATCATCCAGAAAGCCGCAAAGATGAACAGCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS TCA 90 bp | CATGCCCACAATGGCAAACAACACAGTGAACATCTCCCAGTTGGTTaGGAAAATCTGCACGAAGCTGAATCCAGTCTGCACAGCCATGGT | + |
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Preference number: 5 (lower is better) Translates to: HAHNGKQHSEHLPVG*ENLHEAESSLHSHG Trigger: ACCATGGCTGTGCAGACTGGATTCAGCTTCGTGCAGATTTTCTCAACCAACTGGGAGATGTTCACTGTGTTGTTTGCCATTGTGGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS GCA 90 bp | ATCTCCCAGTTGGTTGAGAAAATCTGCACGAAGCTGAATCCAGTCTaGACAGCCATGGTTGCAAAGAGGACTTTCTTCCTGCCAAACCTG | + |
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Preference number: 5 (lower is better) Translates to: ISQLVEKICTKLNPV*TAMVAKRTFFLPNL Trigger: CAGGTTTGGCAGGAAGAAAGTCCTCTTTGCAACCATGGCTGTGCAGACTGGATTCAGCTTCGTGCAGATTTTCTCAACCAACTGGGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS GCA 90 bp | ATGGCAAACAACACAGTGAACATCTCCCAGTTGGTTGAGAAAATCTaGACGAAGCTGAATCCAGTCTGCACAGCCATGGTTGCAAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: MANNTVNISQLVEKI*TKLNPVCTAMVAKR Trigger: CCTCTTTGCAACCATGGCTGTGCAGACTGGATTCAGCTTCGTGCAGATTTTCTCAACCAACTGGGAGATGTTCACTGTGTTGTTTGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS GCA 90 bp | GTGGCAATGTTCCGAGTCCTGAACAGGTCCAGGATTATGACTTTCTaGTGCTTCAAGGAGTTTAGCTCCTGTAGCTCTAGAGGATCGAAT | + |
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Preference number: 5 (lower is better) Translates to: VAMFRVLNRSRIMTF*CFKEFSSCSSRGSN Trigger: ATTCGATCCTCTAGAGCTACAGGAGCTAAACTCCTTGAAGCAGCAGAAAGTCATAATCCTGGACCTGTTCAGGACTCGGAACATTGCCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS GCA 90 bp | GCAATGTTCCGAGTCCTGAACAGGTCCAGGATTATGACTTTCTGCTaGTTCAAGGAGTTTAGCTCCTGTAGCTCTAGAGGATCGAATATC | + |
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Preference number: 5 (lower is better) Translates to: AMFRVLNRSRIMTFC*FKEFSSCSSRGSNI Trigger: GATATTCGATCCTCTAGAGCTACAGGAGCTAAACTCCTTGAAGCAGCAGAAAGTCATAATCCTGGACCTGTTCAGGACTCGGAACATTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR CAA 90 bp | AAAAGGCTTTTGATTTGTTCTGTTGAGACAGGGTTGCTTGTGGTAAGACAGGCTACATCTCCCAGTTGGTaGAGAAAATCTGCACGAAGC | + |
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Preference number: 5 (lower is better) Translates to: KRLLICSVETGLLVVRQATSPSW*RKSARS Trigger: GCTTCGTGCAGATTTTCTCAACCAACTGGGAGATGT...AGCCTGTCTTACCACAAGCAACCCTGTCTCAACAGAACAAATCAAAAGCCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR CAA 90 bp | TTTCTCCACAAGTCCAGTTTGGTGCTCATTGTTTCTGTTAATCCCTTTCAGCAGGTGAACATCTCCCAGTaGGTTGAGAAAATCTGCACG | + |
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Preference number: 5 (lower is better) Translates to: FLHKSSLVLIVSVNPFQQVNISQ*VEKICT Trigger: CGTGCAGATTTTCTCAACCAACTGGGAGATGTTCAC...CTGCTGAAAGGGATTAACAGAAACAATGAGCACCAAACTGGACTTGTGGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR CAA 90 bp | TTTCTCCACAAGTCCAGTTTGGTGCTCATTGTTTCTGTTAATCCCTTTCAGCAGATCTTCAGGTACCACTaGGATCAAGAGAAGCACACC | + |
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Preference number: 5 (lower is better) Translates to: FLHKSSLVLIVSVNPFQQIFRYH*DQEKHT Trigger: GGTGTGCTTCTCTTGATCCAAGTGGTACCTGAAGAT...CTGCTGAAAGGGATTAACAGAAACAATGAGCACCAAACTGGACTTGTGGAGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS-3UTR CAA 90 bp | TCCACAAGTCCAGTTTGGTGCTCATTGTTTCTGTTAATCCCTTTCAGCAGAAAAGCAGTTATTAGAACCTaGGGGCTTTCTTCTCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: STSPVWCSLFLLIPFSRKAVIRT*GLSSLS Trigger: GGACAGAGAAGAAAGCCCCAAGGTTCTAATAACTGC...TTTTCTGCTGAAAGGGATTAACAGAAACAATGAGCACCAAACTGGACTTGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS TCA 72 bp | ATCTCCGTGGCAGGGTTCGCAGTAGCAGCCAGGCTGTaGAGTAAGCTGGAACTTCAATCAGGCCAGAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: ISVAGFAVAARL*SKLELQSGQRG Trigger: TCCTCTCTGGCCTGATTGAAGTTCCAGCTTACTTCACAGCCTGGCTGCTACTGCGAACCCTGCCACGGAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS GCA 72 bp | CATCTTTGCGGCTTTCTGGATGATCTGTTCGGCCTCTaGAAATCTCCTCTGGGATATCAGCCACCGGGGAGA | + |
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Preference number: 6 (lower is better) Translates to: HLCGFLDDLFGL*KSPLGYQPPGR Trigger: TCTCCCCGGTGGCTGATATCCCAGAGGAGATTTGCAGAGGCCGAACAGATCATCCAGAAAGCCGCAAAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS CCA 72 bp | AAATCTCCTCTGGGATATCAGCCACCGGGGAGATTCTaGAATAAACCACCACAGGGGAACACAGAACAGGCC | + |
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Preference number: 6 (lower is better) Translates to: KSPLGYQPPGRF*NKPPQGNTEQA Trigger: GGCCTGTTCTGTGTTCCCCTGTGGTGGTTTATTCCAGAATCTCCCCGGTGGCTGATATCCCAGAGGAGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS CCA 72 bp | TTCTGGATGATCTGTTCGGCCTCTGCAAATCTCCTCTaGGATATCAGCCACCGGGGAGATTCTGGAATAAAC | + |
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Preference number: 6 (lower is better) Translates to: FWMICSASANLL*DISHRGDSGIN Trigger: GTTTATTCCAGAATCTCCCCGGTGGCTGATATCCCAGAGGAGATTTGCAGAGGCCGAACAGATCATCCAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS TCA 72 bp | ACATCTCCCAGTTGGTTGAGAAAATCTGCACGAAGCTaGATCCAGTCTGCACAGCCATGGTTGCAAAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: TSPSWLRKSARS*IQSAQPWLQRG Trigger: TCCTCTTTGCAACCATGGCTGTGCAGACTGGATTCAGCTTCGTGCAGATTTTCTCAACCAACTGGGAGATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS GCA 72 bp | CGAGTCCTGAACAGGTCCAGGATTATGACTTTCTGCTaGTTCAAGGAGTTTAGCTCCTGTAGCTCTAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: RVLNRSRIMTFC*FKEFSSCSSRG Trigger: TCCTCTAGAGCTACAGGAGCTAAACTCCTTGAAGCAGCAGAAAGTCATAATCCTGGACCTGTTCAGGACTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS CAA 72 bp | CAGACTCCTAATGTGGAGAAGATGATGCGAACCGACTaGCTCAGGATTTCAGTTCCTAGTATGAAGGCCACC | + |
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Preference number: 6 (lower is better) Translates to: QTPNVEKMMRTD*LRISVPSMKAT Trigger: GGTGGCCTTCATACTAGGAACTGAAATCCTGAGCAAGTCGGTTCGCATCATCTTCTCCACATTAGGAGTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS GCA 72 bp | TTGGTTGAGAAAATCTGCACGAAGCTGAATCCAGTCTaGACAGCCATGGTTGCAAAGAGGACTTTCTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: LVEKICTKLNPV*TAMVAKRTFFL Trigger: CAGGAAGAAAGTCCTCTTTGCAACCATGGCTGTGCAGACTGGATTCAGCTTCGTGCAGATTTTCTCAACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS GCA 72 bp | TTCCGAGTCCTGAACAGGTCCAGGATTATGACTTTCTaGTGCTTCAAGGAGTTTAGCTCCTGTAGCTCTAGA | + |
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Preference number: 6 (lower is better) Translates to: FRVLNRSRIMTF*CFKEFSSCSSR Trigger: TCTAGAGCTACAGGAGCTAAACTCCTTGAAGCAGCAGAAAGTCATAATCCTGGACCTGTTCAGGACTCGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS CAA 72 bp | CCCACAATGGCAAACAACACAGTGAACATCTCCCAGTaGGTTGAGAAAATCTGCACGAAGCTGAATCCAGTC | + |
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Preference number: 6 (lower is better) Translates to: PTMANNTVNISQ*VEKICTKLNPV Trigger: GACTGGATTCAGCTTCGTGCAGATTTTCTCAACCAACTGGGAGATGTTCACTGTGTTGTTTGCCATTGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS TCA 72 bp | AATGGCAAACAACACAGTGAACATCTCCCAGTTGGTTaGGAAAATCTGCACGAAGCTGAATCCAGTCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: NGKQHSEHLPVG*ENLHEAESSLH Trigger: GTGCAGACTGGATTCAGCTTCGTGCAGATTTTCTCAACCAACTGGGAGATGTTCACTGTGTTGTTTGCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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| CDS GCA 72 bp | TTTTTCCCACATCTGAACCCTCTCACTTTCTGCATCTaGTCCAAGTTCTCTGGTAGAGTCACTCCAAAACTT | + |
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Preference number: 6 (lower is better) Translates to: FFPHLNPLTFCI*SKFSGRVTPKL Trigger: AAGTTTTGGAGTGACTCTACCAGAGAACTTGGAGCAGATGCAGAAAGTGAGAGGGTTCAGATGTGGGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020586.7 |
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