Pregenerated sensors for SLC22A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023828Ensembl transcript IDs: ENSMUST00000024595.4, ENSMUST00000233535.2
Found 142 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCAGGTCCTCTGTTGTGTTGCATTTAAGGAGCTGTGCCTAACCTaGGATCTGGGACCTCAGCACCTGCAGGAGACAGGAGGGGAGCAG | + |
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Preference number: 1 (lower is better) Translates to: SQVLCCVAFKELCLT*DLGPQHLQETGGEQ Trigger: CTGCTCCCCTCCTGTCTCCTGCAGGTGCTGAGGTCCCAGATCCCAGGTTAGGCACAGCTCCTTAAATGCAACACAACAGAGGACCTGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR TCA 90 bp | CGACTGTGGTCCTCAGCCACGGTATCCCTTCTGGTAAAAATGCAGTaGCCAGACACGACACCCCTGCCACTATATTGCTTGCCGCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: RLWSSATVSLLVKMQ*PDTTPLPLYCLPQR Trigger: CCTTTGCGGCAAGCAATATAGTGGCAGGGGTGTCGTGTCTGGTCACTGCATTTTTACCAGAAGGGATACCGTGGCTGAGGACCACAGTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
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| 3UTR GCA 90 bp | CAATACCACAGCCAGGTCCTCTGTTGTGTTGCATTTAAGGAGCTGTaGCTAACCTGGGATCTGGGACCTCAGCACCTGCAGGAGACAGGA | + |
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Preference number: 1 (lower is better) Translates to: QYHSQVLCCVAFKEL*LTWDLGPQHLQETG Trigger: TCCTGTCTCCTGCAGGTGCTGAGGTCCCAGATCCCAGGTTAGGCACAGCTCCTTAAATGCAACACAACAGAGGACCTGGCTGTGGTATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR CCA 90 bp | CACTTCTGGACACGTGCCAGGCCTTGGTTTGTTCATCCTGCTTCCTaGATGGTACTGTCTTGTCCTGAGAACTGGAGAACTGGTTGGGGC | + |
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Preference number: 1 (lower is better) Translates to: HFWTRARPWFVHPAS*MVLSCPENWRTGWG Trigger: GCCCCAACCAGTTCTCCAGTTCTCAGGACAAGACAGTACCATCCAGGAAGCAGGATGAACAAACCAAGGCCTGGCACGTGTCCAGAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR GCA 90 bp | AGTGGTCCTCTGAAGGAGGTGGTGAAATATCTGGGGCCTGGGGACTaGAGCATGACTTCACAATACCACAGCCAGGTCCTCTGTTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: SGPLKEVVKYLGPGD*SMTSQYHSQVLCCV Trigger: AACACAACAGAGGACCTGGCTGTGGTATTGTGAAGTCATGCTGCAGTCCCCAGGCCCCAGATATTTCACCACCTCCTTCAGAGGACCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR CCA 90 bp | TCTGGACACGTGCCAGGCCTTGGTTTGTTCATCCTGCTTCCTGGATaGTACTGTCTTGTCCTGAGAACTGGAGAACTGGTTGGGGCCTTT | + |
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Preference number: 1 (lower is better) Translates to: SGHVPGLGLFILLPG*YCLVLRTGELVGAF Trigger: AAAGGCCCCAACCAGTTCTCCAGTTCTCAGGACAAGACAGTACCATCCAGGAAGCAGGATGAACAAACCAAGGCCTGGCACGTGTCCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR TCA 90 bp | GACTCTTCAGAACACTCTTCACTGCGGTGTGTTGATCAGATCAGCTaGGCGCACTTCTGGACACGTGCCAGGCCTTGGTTTGTTCATCCT | + |
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Preference number: 1 (lower is better) Translates to: DSSEHSSLRCVDQIS*AHFWTRARPWFVHP Trigger: AGGATGAACAAACCAAGGCCTGGCACGTGTCCAGAAGTGCGCTCAGCTGATCTGATCAACACACCGCAGTGAAGAGTGTTCTGAAGAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR CCA 90 bp | GCTTCCTGGATGGTACTGTCTTGTCCTGAGAACTGGAGAACTGGTTaGGGCCTTTTCATCTCTCCTTACCTAATGGGTGAGAGACTTGCT | + |
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Preference number: 1 (lower is better) Translates to: ASWMVLSCPENWRTG*GLFISPYLMGERLA Trigger: AGCAAGTCTCTCACCCATTAGGTAAGGAGAGATGAAAAGGCCCCAACCAGTTCTCCAGTTCTCAGGACAAGACAGTACCATCCAGGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR TCA 90 bp | GGCTGTTGGGGAACTGAGCATCACACTCCGTTCTCCTGTGCTTTATaGTTAAACATCTGTCTAACAGTCACACACATCTTCTCCAGTGTT | + |
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Preference number: 1 (lower is better) Translates to: GCWGTEHHTPFSCAL*LNICLTVTHIFSSV Trigger: AACACTGGAGAAGATGTGTGTGACTGTTAGACAGATGTTTAATCATAAAGCACAGGAGAACGGAGTGTGATGCTCAGTTCCCCAACAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGACCTCAGCACCTGCAGGAGACAGGAGGGGAGCAGCGCCGGACATGTCGGGGTACTGTCTTGTCCTaGGAACTGGAGAACTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: LGPQHLQETGGEQRRTCRGTVLS*ELENWL Trigger: CAACCAGTTCTCCAGTTCTCAGGACAAGACAGTACC...CCGACATGTCCGGCGCTGCTCCCCTCCTGTCTCCTGCAGGTGCTGAGGTCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR CCA 90 bp | ACACTGCACAGGCATATTCCAGTCTTCTCTGGTCCTCCAGGCAACACAGGGGCCACACGTGCCAGGCCTTaGTTTGTTCATCCTGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: TLHRHIPVFSGPPGNTGATRARP*FVHPAS Trigger: GGAAGCAGGATGAACAAACCAAGGCCTGGCACGTGT...GGCCCCTGTGTTGCCTGGAGGACCAGAGAAGACTGGAATATGCCTGTGCAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGGTGTGGCAATGAATACCCCAAAGGCTGTTGGGGAACTGAGCATCACACTCCCCCTGCCACTATATTaGTTGCCGCAAAGGGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: VGVAMNTPKAVGELSITLPLPLY*LPQREG Trigger: GCCTTCCCTTTGCGGCAAGCAATATAGTGGCAGGGG...GAGTGTGATGCTCAGTTCCCCAACAGCCTTTGGGGTATTCATTGCCACACCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
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| 3UTR-3UTR CCA 90 bp | CGAAGGACTAAACAGACAATAGGGTCACCGAGAGGAGAACTGAAAGTCTTGGCGCCAAAGGCAGCAGGGTaGACAAGAGCCGTGCTACAG | + |
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Preference number: 2 (lower is better) Translates to: RRTKQTIGSPRGELKVLAPKAAG*TRAVLQ Trigger: CTGTAGCACGGCTCTTGTCCACCCTGCTGCCTTTGG...CGCCAAGACTTTCAGTTCTCCTCTCGGTGACCCTATTGTCTGTTTAGTCCTTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
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| 3UTR-3UTR GCA 90 bp | GTGCTTTGGACTCTCAGTCACAGGCACCCCTGGAACGGAATTCACAAATATGACCTGGGGCCTGGGGACTaGAGCATGACTTCACAATAC | + |
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Preference number: 2 (lower is better) Translates to: VLWTLSHRHPWNGIHKYDLGPGD*SMTSQY Trigger: GTATTGTGAAGTCATGCTGCAGTCCCCAGGCCCCAG...GTCATATTTGTGAATTCCGTTCCAGGGGTGCCTGTGACTGAGAGTCCAAAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR GCA 90 bp | CGAAGGACTAAACAGACAATAGGGTCACCGAGAGGAGAACTGAAAGTCTTGGCGCAGACACGACACCCCTaGCACTATATTGCTTGCCGC | + |
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Preference number: 2 (lower is better) Translates to: RRTKQTIGSPRGELKVLAQTRHP*HYIACR Trigger: GCGGCAAGCAATATAGTGGCAGGGGTGTCGTGTCTG...CGCCAAGACTTTCAGTTCTCCTCTCGGTGACCCTATTGTCTGTTTAGTCCTTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGGAGGTGGTGAAATATCTGGGGCCTGGGGACTGCAGCATGACTTCACAATAACACGTGCCAGGCCTTaGTTTGTTCATCCTGCTTCC | + |
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Preference number: 2 (lower is better) Translates to: EGGGEISGAWGLQHDFTITRARP*FVHPAS Trigger: GGAAGCAGGATGAACAAACCAAGGCCTGGCACGTGT...TATTGTGAAGTCATGCTGCAGTCCCCAGGCCCCAGATATTTCACCACCTCCTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR TCA 90 bp | AACTTGAAATGCAATCCAAAGGCAGCAGGGTGGACAAGAGCCGTGCTACAGCCAGAGAGACTTGCTGAATaGGAACCTAGCCAGAATCCG | + |
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Preference number: 2 (lower is better) Translates to: NLKCNPKAAGWTRAVLQPERLAE*EPSQNP Trigger: CGGATTCTGGCTAGGTTCTCATTCAGCAAGTCTCTC...TGGCTGTAGCACGGCTCTTGTCCACCCTGCTGCCTTTGGATTGCATTTCAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR TCA 90 bp | ACTACCAACTTGAAATGCAATCCAAAGGCAGCAGGGTGGACAAGAGCCGTGCTACAGTGGGTGTGGCAATaGATACCCCAAAGGCTGTTG | + |
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Preference number: 2 (lower is better) Translates to: TTNLKCNPKAAGWTRAVLQWVWQ*IPQRLL Trigger: CAACAGCCTTTGGGGTATTCATTGCCACACCCACTG...TAGCACGGCTCTTGTCCACCCTGCTGCCTTTGGATTGCATTTCAAGTTGGTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR TCA 90 bp | CGAAGGACTAAACAGACAATAGGGTCACCGAGAGGAGAACTGAAAGTCTTGGCGGAGAGACTTGCTGAATaGGAACCTAGCCAGAATCCG | + |
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Preference number: 2 (lower is better) Translates to: RRTKQTIGSPRGELKVLAERLAE*EPSQNP Trigger: CGGATTCTGGCTAGGTTCTCATTCAGCAAGTCTCTC...CGCCAAGACTTTCAGTTCTCCTCTCGGTGACCCTATTGTCTGTTTAGTCCTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGTACTGTCTTGTCCTGAGAACTGGAGAACTGGTTGGGGCCTTTTCATCTCTTGCCACTATATTGCTTaGCGCAAAGGGAAGGCGTCG | + |
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Preference number: 2 (lower is better) Translates to: MVLSCPENWRTGWGLFISCHYIA*RKGKAS Trigger: CGACGCCTTCCCTTTGCGGCAAGCAATATAGTGGCA...AGAGATGAAAAGGCCCCAACCAGTTCTCCAGTTCTCAGGACAAGACAGTACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGGAGGTGGTGAAATATCTGGGGCCTGGGGACTGCAGCATGACTTCACAATAAACTGGAGAACTGGTTaGGGCCTTTTCATCTCTCCT | + |
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Preference number: 2 (lower is better) Translates to: EGGGEISGAWGLQHDFTINWRTG*GLFISP Trigger: AGGAGAGATGAAAAGGCCCCAACCAGTTCTCCAGTT...TATTGTGAAGTCATGCTGCAGTCCCCAGGCCCCAGATATTTCACCACCTCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR TCA 90 bp | GTGGGTGTGGCAATGAATACCCCAAAGGCTGTTGGGGAACTGAGCATCACACTCTCAATAAAGAGCCTGTaGTTACAGTGGTCCTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: VGVAMNTPKAVGELSITLSIKSL*LQWSSE Trigger: TTCAGAGGACCACTGTAATCACAGGCTCTTTATTGA...GAGTGTGATGCTCAGTTCCCCAACAGCCTTTGGGGTATTCATTGCCACACCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGTACTGTCTTGTCCTGAGAACTGGAGAACTGGTTGGGGCCTTTTCATCTCTTATTCCAGTCTTCTCTaGTCCTCCAGGCAACACAGG | + |
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Preference number: 2 (lower is better) Translates to: MVLSCPENWRTGWGLFISYSSLL*SSRQHR Trigger: CCTGTGTTGCCTGGAGGACCAGAGAAGACTGGAATA...AGAGATGAAAAGGCCCCAACCAGTTCTCCAGTTCTCAGGACAAGACAGTACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCCACACACATTGGCAAGGTTTCTCTTTGATGCTAATTTTGCCTGTCCACACTATTCCAGTCTTCTCTaGTCCTCCAGGCAACACAGG | + |
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Preference number: 2 (lower is better) Translates to: PPHTLARFLFDANFACPHYSSLL*SSRQHR Trigger: CCTGTGTTGCCTGGAGGACCAGAGAAGACTGGAATA...GTGTGGACAGGCAAAATTAGCATCAAAGAGAAACCTTGCCAATGTGTGTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR CCA 90 bp | CGAAGGACTAAACAGACAATAGGGTCACCGAGAGGAGAACTGAAAGTCTTGGCGAATCCGGGTACCTACTaGGTCTTCATGAAACAGGTC | + |
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Preference number: 2 (lower is better) Translates to: RRTKQTIGSPRGELKVLANPGTY*VFMKQV Trigger: GACCTGTTTCATGAAGACCCAGTAGGTACCCGGATT...CGCCAAGACTTTCAGTTCTCCTCTCGGTGACCCTATTGTCTGTTTAGTCCTTCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCTTTGGACTCTCAGTCACAGGCACCCCTGGAACGGAATTCACAAATATGACTACTGTGTTTACATTTaGGTCTCTGCTCCAGAAGGC | + |
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Preference number: 2 (lower is better) Translates to: VLWTLSHRHPWNGIHKYDYCVYI*VSAPEG Trigger: GCCTTCTGGAGCAGAGACTCAAATGTAAACACAGTA...GTCATATTTGTGAATTCCGTTCCAGGGGTGCCTGTGACTGAGAGTCCAAAGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTTTGTTCATCCTGCTTCCTGGATGGTACTGTCTTGTCCTGAGAACTGGAGAAATCCGGGTACCTACTaGGTCTTCATGAAACAGGTC | + |
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Preference number: 2 (lower is better) Translates to: WFVHPASWMVLSCPENWRNPGTY*VFMKQV Trigger: GACCTGTTTCATGAAGACCCAGTAGGTACCCGGATT...TCTCCAGTTCTCAGGACAAGACAGTACCATCCAGGAAGCAGGATGAACAAACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGAAATATCTGGGGCCTGGGGACTGCAGCATGACTTCACAATACCACAGCCAGGAAATCCAAATCCGTaGTTTGTTTTCTTCCTCAAT | + |
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Preference number: 2 (lower is better) Translates to: GEISGAWGLQHDFTIPQPGNPNP*FVFFLN Trigger: ATTGAGGAAGAAAACAAAGCACGGATTTGGATTTCC...TGGCTGTGGTATTGTGAAGTCATGCTGCAGTCCCCAGGCCCCAGATATTTCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGGTGTGGCAATGAATACCCCAAAGGCTGTTGGGGAACTGAGCATCACACTCGGAAATCCAAATCCGTaGTTTGTTTTCTTCCTCAAT | + |
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Preference number: 2 (lower is better) Translates to: VGVAMNTPKAVGELSITLGNPNP*FVFFLN Trigger: ATTGAGGAAGAAAACAAAGCACGGATTTGGATTTCC...GAGTGTGATGCTCAGTTCCCCAACAGCCTTTGGGGTATTCATTGCCACACCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR CCA 90 bp | CGAAGGACTAAACAGACAATAGGGTCACCGAGAGGAGAACTGAAAGTCTTGGCGCAATTTCGAAGGCCATaGTTATTCCTAGTCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: RRTKQTIGSPRGELKVLAQFRRP*LFLVFP Trigger: TGGGAAGACTAGGAATAACCATGGCCTTCGAAATTG...CGCCAAGACTTTCAGTTCTCCTCTCGGTGACCCTATTGTCTGTTTAGTCCTTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
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| 3UTR-3UTR CCA 90 bp | TCCGTTCTCCTGTGCTTTATGATTAAACATCTGTCTAACAGTCACACACATCTTGAAATATCTGGGGCCTaGGGACTGCAGCATGACTTC | + |
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Preference number: 2 (lower is better) Translates to: SVLLCFMIKHLSNSHTHLEISGA*GLQHDF Trigger: GAAGTCATGCTGCAGTCCCCAGGCCCCAGATATTTC...AAGATGTGTGTGACTGTTAGACAGATGTTTAATCATAAAGCACAGGAGAACGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR CAA 90 bp | CACACAAGCCTGAGCAGAGTGAAACCCCAAAGTTCCGTAATGTCGTaGGGTACAACTCTGAATTTACCAAATAAACAATTTCGAAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: HTSLSRVKPQSSVMS*GTTLNLPNKQFRRP Trigger: TGGCCTTCGAAATTGTTTATTTGGTAAATTCAGAGTTGTACCCAACGACATTACGGAACTTTGGGGTTTCACTCTGCTCAGGCTTGTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
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| 3UTR-3UTR TCA 90 bp | TCCGTTCTCCTGTGCTTTATGATTAAACATCTGTCTAACAGTCACACACATCTTGGTACTGTCTTGTCCTaGGAACTGGAGAACTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: SVLLCFMIKHLSNSHTHLGTVLS*ELENWL Trigger: CAACCAGTTCTCCAGTTCTCAGGACAAGACAGTACC...AAGATGTGTGTGACTGTTAGACAGATGTTTAATCATAAAGCACAGGAGAACGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR CCA 90 bp | TGTCTAACAGTCACACACATCTTCTCCAGTGTTGCAAACATAGTATGCTCTCCAAGTCACAGGCACCCCTaGAACGGAATTCACAAATAT | + |
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Preference number: 2 (lower is better) Translates to: CLTVTHIFSSVANIVCSPSHRHP*NGIHKY Trigger: ATATTTGTGAATTCCGTTCCAGGGGTGCCTGTGACT...TGGAGAGCATACTATGTTTGCAACACTGGAGAAGATGTGTGTGACTGTTAGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR CAA 90 bp | CTGGGTCTTCATGAAACAGGTCCAAGATTATGTGTTCCCCGAAGCTaGGGCAGCATGATAAATCTTCATCTTATACCTTATAAAATACTC | + |
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Preference number: 2 (lower is better) Translates to: LGLHETGPRLCVPRS*GSMINLHLIPYKIL Trigger: GAGTATTTTATAAGGTATAAGATGAAGATTTATCATGCTGCCCAAGCTTCGGGGAACACATAATCTTGGACCTGTTTCATGAAGACCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR GCA 72 bp | AATGCAATCCAAAGGCAGCAGGGTGGACAAGAGCCGTaGTACAGCCACGAAACACGCAGGCAGCCGGGCCAC | + |
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Preference number: 3 (lower is better) Translates to: NAIQRQQGGQEP*YSHETRRQPGH Trigger: GTGGCCCGGCTGCCTGCGTGTTTCGTGGCTGTAGCACGGCTCTTGTCCACCCTGCTGCCTTTGGATTGCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR GCA 72 bp | CTTGGAAGGGCGCCACCTAGAGGAGGCGAAGCACACTaGACAGGCATATTCCAGTCTTCTCTGGTCCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: LGRAPPRGGEAH*TGIFQSSLVLQ Trigger: CTGGAGGACCAGAGAAGACTGGAATATGCCTGTGCAGTGTGCTTCGCCTCCTCTAGGTGGCGCCCTTCCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR GCA 72 bp | AGCCAGGTCCTCTGTTGTGTTGCATTTAAGGAGCTGTaGCTAACCTGGGATCTGGGACCTCAGCACCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: SQVLCCVAFKEL*LTWDLGPQHLQ Trigger: CTGCAGGTGCTGAGGTCCCAGATCCCAGGTTAGGCACAGCTCCTTAAATGCAACACAACAGAGGACCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR GCA 72 bp | CTGAAGGAGGTGGTGAAATATCTGGGGCCTGGGGACTaGAGCATGACTTCACAATACCACAGCCAGGTCCTC | + |
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Preference number: 3 (lower is better) Translates to: LKEVVKYLGPGD*SMTSQYHSQVL Trigger: GAGGACCTGGCTGTGGTATTGTGAAGTCATGCTGCAGTCCCCAGGCCCCAGATATTTCACCACCTCCTTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGGTGTGGCAATGAATACCCCAAAGGCTGTTGGGGAACTGAGCATCACACTCGTGCCAGGCCTTGGTTaGTTCATCCTGCTTCCTGGA | + |
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Preference number: 3 (lower is better) Translates to: VGVAMNTPKAVGELSITLVPGLG*FILLPG Trigger: TCCAGGAAGCAGGATGAACAAACCAAGGCCTGGCAC...GAGTGTGATGCTCAGTTCCCCAACAGCCTTTGGGGTATTCATTGCCACACCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR CCA 72 bp | CTCTGTTGTGTTGCATTTAAGGAGCTGTGCCTAACCTaGGATCTGGGACCTCAGCACCTGCAGGAGACAGGA | + |
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Preference number: 3 (lower is better) Translates to: LCCVAFKELCLT*DLGPQHLQETG Trigger: TCCTGTCTCCTGCAGGTGCTGAGGTCCCAGATCCCAGGTTAGGCACAGCTCCTTAAATGCAACACAACAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR CCA 72 bp | CACAGTGGGTGTGGCAATGAATACCCCAAAGGCTGTTaGGGAACTGAGCATCACACTCCGTTCTCCTGTGCT | + |
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Preference number: 3 (lower is better) Translates to: HSGCGNEYPKGC*GTEHHTPFSCA Trigger: AGCACAGGAGAACGGAGTGTGATGCTCAGTTCCCCAACAGCCTTTGGGGTATTCATTGCCACACCCACTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR CCA 72 bp | ACTACCAACTTGAAATGCAATCCAAAGGCAGCAGGGTaGACAAGAGCCGTGCTACAGCCACGAAACACGCAG | + |
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Preference number: 3 (lower is better) Translates to: TTNLKCNPKAAG*TRAVLQPRNTQ Trigger: CTGCGTGTTTCGTGGCTGTAGCACGGCTCTTGTCCACCCTGCTGCCTTTGGATTGCATTTCAAGTTGGTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTGCGAAGGCTTGTATTCGGAGCTCAAGGGAAGAAATAGCAGTTCTCAGACTGACACGTGCCAGGCCTaGGTTTGTTCATCCTGCTTC | + |
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Preference number: 3 (lower is better) Translates to: PCEGLYSELKGRNSSSQTDTCQA*VCSSCF Trigger: GAAGCAGGATGAACAAACCAAGGCCTGGCACGTGTC...AGTCTGAGAACTGCTATTTCTTCCCTTGAGCTCCGAATACAAGCCTTCGCAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| 3UTR-3UTR CAA 90 bp | CGAAGGACTAAACAGACAATAGGGTCACCGAGAGGAGAACTGAAAGTCTTGGCGGACACGTGCCAGGCCTaGGTTTGTTCATCCTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RRTKQTIGSPRGELKVLADTCQA*VCSSCF Trigger: GAAGCAGGATGAACAAACCAAGGCCTGGCACGTGTC...CGCCAAGACTTTCAGTTCTCCTCTCGGTGACCCTATTGTCTGTTTAGTCCTTCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
||
| 3UTR-3UTR CAA 90 bp | TTCATCCTGCTTCCTGGATGGTACTGTCTTGTCCTGAGAACTGGAGAACTGGTTCTGCCACTATATTGCTaGCCGCAAAGGGAAGGCGTC | + |
|
Preference number: 3 (lower is better) Translates to: FILLPGWYCLVLRTGELVLPLYC*PQREGV Trigger: GACGCCTTCCCTTTGCGGCAAGCAATATAGTGGCAG...AACCAGTTCTCCAGTTCTCAGGACAAGACAGTACCATCCAGGAAGCAGGATGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCCACACACATTGGCAAGGTTTCTCTTTGATGCTAATTTTGCCTGTCCACACACCCCTGCCACTATATaGCTTGCCGCAAAGGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PPHTLARFLFDANFACPHTPATI*LAAKGR Trigger: CCTTCCCTTTGCGGCAAGCAATATAGTGGCAGGGGT...GTGTGGACAGGCAAAATTAGCATCAAAGAGAAACCTTGCCAATGTGTGTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
||
| 3UTR TCA 72 bp | TCCTCAGCCACGGTATCCCTTCTGGTAAAAATGCAGTaGCCAGACACGACACCCCTGCCACTATATTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: SSATVSLLVKMQ*PDTTPLPLYCL Trigger: CAAGCAATATAGTGGCAGGGGTGTCGTGTCTGGTCACTGCATTTTTACCAGAAGGGATACCGTGGCTGAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
||
| 3UTR CCA 72 bp | GTGCCAGGCCTTGGTTTGTTCATCCTGCTTCCTGGATaGTACTGTCTTGTCCTGAGAACTGGAGAACTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: VPGLGLFILLPG*YCLVLRTGELV Trigger: AACCAGTTCTCCAGTTCTCAGGACAAGACAGTACCATCCAGGAAGCAGGATGAACAAACCAAGGCCTGGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| 3UTR CCA 72 bp | ACACGTGCCAGGCCTTGGTTTGTTCATCCTGCTTCCTaGATGGTACTGTCTTGTCCTGAGAACTGGAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: TRARPWFVHPAS*MVLSCPENWRT Trigger: AGTTCTCCAGTTCTCAGGACAAGACAGTACCATCCAGGAAGCAGGATGAACAAACCAAGGCCTGGCACGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| 3UTR-3UTR CAA 90 bp | AACTTGAAATGCAATCCAAAGGCAGCAGGGTGGACAAGAGCCGTGCTACAGCCATGTGTTCCCCGAAGCTaGGGCAGCATGATAAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: NLKCNPKAAGWTRAVLQPCVPRS*GSMINL Trigger: AAGATTTATCATGCTGCCCAAGCTTCGGGGAACACA...TGGCTGTAGCACGGCTCTTGTCCACCCTGCTGCCTTTGGATTGCATTTCAAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| 3UTR TCA 72 bp | ATCTCTCCTTACCTAATGGGTGAGAGACTTGCTGAATaGGAACCTAGCCAGAATCCGGGTACCTACTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: ISPYLMGERLAE*EPSQNPGTYWV Trigger: GACCCAGTAGGTACCCGGATTCTGGCTAGGTTCTCATTCAGCAAGTCTCTCACCCATTAGGTAAGGAGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| 3UTR TCA 72 bp | TGTTCATCCTGCTTCCTGGATGGTACTGTCTTGTCCTaGGAACTGGAGAACTGGTTGGGGCCTTTTCATCTC | + |
|
Preference number: 3 (lower is better) Translates to: CSSCFLDGTVLS*ELENWLGPFHL Trigger: GAGATGAAAAGGCCCCAACCAGTTCTCCAGTTCTCAGGACAAGACAGTACCATCCAGGAAGCAGGATGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| 3UTR CCA 72 bp | ATGGTACTGTCTTGTCCTGAGAACTGGAGAACTGGTTaGGGCCTTTTCATCTCTCCTTACCTAATGGGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: MVLSCPENWRTG*GLFISPYLMGE Trigger: CTCACCCATTAGGTAAGGAGAGATGAAAAGGCCCCAACCAGTTCTCCAGTTCTCAGGACAAGACAGTACCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCCACACACATTGGCAAGGTTTCTCTTTGATGCTAATTTTGCCTGTCCACACTGTGTTCCCCGAAGCTaGGGCAGCATGATAAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: PPHTLARFLFDANFACPHCVPRS*GSMINL Trigger: AAGATTTATCATGCTGCCCAAGCTTCGGGGAACACA...GTGTGGACAGGCAAAATTAGCATCAAAGAGAAACCTTGCCAATGTGTGTGGGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| 3UTR TCA 72 bp | GAAGGCCGAGCAAAACCTCTGCTTACTAAAGCTTACTaGATATGGGGAGAGGGCTTAGGGTGTTTGGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: EGRAKPLLTKAY*IWGEGLGCLEK Trigger: TTTTTCCAAACACCCTAAGCCCTCTCCCCATATTCAGTAAGCTTTAGTAAGCAGAGGTTTTGCTCGGCCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTACCAACTTGAAATGCAATCCAAAGGCAGCAGGGTGGACAAGAGCCGTGCTAATCCAAATCCGTGCTTaGTTTTCTTCCTCAATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: TTNLKCNPKAAGWTRAVLIQIRA*FSSSIK Trigger: CTTTATTGAGGAAGAAAACAAAGCACGGATTTGGAT...TAGCACGGCTCTTGTCCACCCTGCTGCCTTTGGATTGCATTTCAAGTTGGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTTTGGACTCTCAGTCACAGGCACCCCTGGAACGGAATTCACAAATATGACATCCAAATCCGTGCTTaGTTTTCTTCCTCAATAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VLWTLSHRHPWNGIHKYDIQIRA*FSSSIK Trigger: CTTTATTGAGGAAGAAAACAAAGCACGGATTTGGAT...GTCATATTTGTGAATTCCGTTCCAGGGGTGCCTGTGACTGAGAGTCCAAAGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| 3UTR TCA 72 bp | TTTGTTGATTGGATTGAAAGGGAGATGAGGAATAACTaGCTAGGTGGAAGGCCGAGCAAAACCTCTGCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: FVDWIEREMRNN*LGGRPSKTSAY Trigger: GTAAGCAGAGGTTTTGCTCGGCCTTCCACCTAGTCAGTTATTCCTCATCTCCCTTTCAATCCAATCAACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
||
| 3UTR CCA 72 bp | AAGTCTGTGCTTTGGACTCTCAGTCACAGGCACCCCTaGAACGGAATTCACAAATATGACATAATTATCCCT | + |
|
Preference number: 3 (lower is better) Translates to: KSVLWTLSHRHP*NGIHKYDIIIP Trigger: AGGGATAATTATGTCATATTTGTGAATTCCGTTCCAGGGGTGCCTGTGACTGAGAGTCCAAAGCACAGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| 3UTR TCA 72 bp | TTCCTCCCAAGACAAGTCAAAAATGCGAAGATGGAATaGAAAAAGTCTGTGCTTTGGACTCTCAGTCACAGG | + |
|
Preference number: 3 (lower is better) Translates to: FLPRQVKNAKME*KKSVLWTLSHR Trigger: CCTGTGACTGAGAGTCCAAAGCACAGACTTTTTTCATTCCATCTTCGCATTTTTGACTTGTCTTGGGAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| 3UTR TCA 72 bp | GGAACTGAGCATCACACTCCGTTCTCCTGTGCTTTATaGTTAAACATCTGTCTAACAGTCACACACATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GTEHHTPFSCAL*LNICLTVTHIF Trigger: GAAGATGTGTGTGACTGTTAGACAGATGTTTAATCATAAAGCACAGGAGAACGGAGTGTGATGCTCAGTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTAACAGTCACACACATCTTCTCCAGTGTTGCAAACATAGTATGCTCTCCATGGCAAGGTTTCTCTTaGATGCTAATTTTGCCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: CLTVTHIFSSVANIVCSPWQGFS*MLILPV Trigger: GACAGGCAAAATTAGCATCAAAGAGAAACCTTGCCA...TGGAGAGCATACTATGTTTGCAACACTGGAGAAGATGTGTGTGACTGTTAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGATGTTATTTCCCAGTTTGGAGACAGTAAGCAACACACACATGTTATGTGGGAGTTCCGTAATGTCGTaGGGTACAACTCTGAATTTA | + |
|
Preference number: 3 (lower is better) Translates to: VMLFPSLETVSNTHMLCGSSVMS*GTTLNL Trigger: TAAATTCAGAGTTGTACCCAACGACATTACGGAACT...CCCACATAACATGTGTGTGTTGCTTACTGTCTCCAAACTGGGAAATAACATCAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
||
| 3UTR GCA 72 bp | CATCTGTCTAACAGTCACACACATCTTCTCCAGTGTTaGAAACATAGTATGCTCTCCACAAGTGAAATAGTT | + |
|
Preference number: 3 (lower is better) Translates to: HLSNSHTHLLQC*KHSMLSTSEIV Trigger: AACTATTTCACTTGTGGAGAGCATACTATGTTTGCAACACTGGAGAAGATGTGTGTGACTGTTAGACAGATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| 3UTR TCA 72 bp | AAAATCGTTTATTGTTATGAAACAGAACTACCAACTTaGAATGCAATCCAAAGGCAGCAGGGTGGACAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KIVYCYETELPT*NAIQRQQGGQE Trigger: CTCTTGTCCACCCTGCTGCCTTTGGATTGCATTTCAAGTTGGTAGTTCTGTTTCATAACAATAAACGATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGACCTCAGCACCTGCAGGAGACAGGAGGGGAGCAGCGCCGGACATGTCGGCTCCTTGCTTCCGGGTaGTCAGCCAGCGGGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LGPQHLQETGGEQRRTCRLLASG*SASGET Trigger: AGTCTCCCCGCTGGCTGATCACCCGGAAGCAAGGAG...CCGACATGTCCGGCGCTGCTCCCCTCCTGTCTCCTGCAGGTGCTGAGGTCCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGACCTCAGCACCTGCAGGAGACAGGAGGGGAGCAGCGCCGGACATGTCGGTCAGGATGGCTTGGGTaGGGTCCAACATCCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LGPQHLQETGGEQRRTCRSGWLG*GPTSRH Trigger: ATGCCTGGATGTTGGACCTCACCCAAGCCATCCTGA...CCGACATGTCCGGCGCTGCTCCCCTCCTGTCTCCTGCAGGTGCTGAGGTCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR CCA 90 bp | AACTTGAAATGCAATCCAAAGGCAGCAGGGTGGACAAGAGCCGTGCTACAGCCAAGGAACACGCGCCGCTaGAAGCGCCCGAACTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NLKCNPKAAGWTRAVLQPRNTRR*KRPNSP Trigger: GGGCGAGTTCGGGCGCTTCCAGCGGCGCGTGTTCCT...TGGCTGTAGCACGGCTCTTGTCCACCCTGCTGCCTTTGGATTGCATTTCAAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR CCA 90 bp | TGGTTTGTTCATCCTGCTTCCTGGATGGTACTGTCTTGTCCTGAGAACTGGAGACGGTGGCAGTGGCCTTaGCCGCGGCGCTCAGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: WFVHPASWMVLSCPENWRRWQWP*PRRSAG Trigger: CCCAGCTGAGCGCCGCGGCCAAGGCCACTGCCACCG...TCTCCAGTTCTCAGGACAAGACAGTACCATCCAGGAAGCAGGATGAACAAACCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR CCA 90 bp | ACACTGCACAGGCATATTCCAGTCTTCTCTGGTCCTCCAGGCAACACAGGGGCCAGAGAGATGGCTAGCTaGATGCCCTGCCAGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLHRHIPVFSGPPGNTGAREMAS*MPCQLG Trigger: GCCCAGCTGGCAGGGCATCCAGCTAGCCATCTCTCT...GGCCCCTGTGTTGCCTGGAGGACCAGAGAAGACTGGAATATGCCTGTGCAGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR TCA 90 bp | GGCGAAGCACACTGCACAGGCATATTCCAGTCTTCTCTGGTCCTCCAGGCAACAAGAGGAAGGCGAAGGTaGCACCCGTCAGGCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GEAHCTGIFQSSLVLQATRGRRR*HPSGTA Trigger: TGCTGTGCCTGACGGGTGTCACCTTCGCCTTCCTCT...TGTTGCCTGGAGGACCAGAGAAGACTGGAATATGCCTGTGCAGTGTGCTTCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR GCA 90 bp | GGTGAAATATCTGGGGCCTGGGGACTGCAGCATGACTTCACAATACCACAGCCAGCCCGCCTTCCTCAGTaGCTGGTCGAACGTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GEISGAWGLQHDFTIPQPARLPQ*LVERGH Trigger: ATGCCCACGTTCGACCAGGCACTGAGGAAGGCGGGC...TGGCTGTGGTATTGTGAAGTCATGCTGCAGTCCCCAGGCCCCAGATATTTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| 3UTR CAA 72 bp | GGGGAGCAGCGCCGGACATGTCGGCCCTGCGAAGGCTaGTATTCGGAGCTCAAGGGAAGAAATAGCAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GEQRRTCRPCEG*YSELKGRNSSS Trigger: AGAACTGCTATTTCTTCCCTTGAGCTCCGAATACAAGCCTTCGCAGGGCCGACATGTCCGGCGCTGCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| 3UTR CAA 72 bp | AATGCAGTGACCAGACACGACACCCCTGCCACTATATaGCTTGCCGCAAAGGGAAGGCGTCGTCCAAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: NAVTRHDTPATI*LAAKGRRRPRR Trigger: GCGCCTTGGACGACGCCTTCCCTTTGCGGCAAGCAATATAGTGGCAGGGGTGTCGTGTCTGGTCACTGCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTACTGTCTTGTCCTGAGAACTGGAGAACTGGTTGGGGCCTTTTCATCTCTAGGAACACGCGCCGCTaGAAGCGCCCGAACTCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MVLSCPENWRTGWGLFISRNTRR*KRPNSP Trigger: GGGCGAGTTCGGGCGCTTCCAGCGGCGCGTGTTCCT...AGAGATGAAAAGGCCCCAACCAGTTCTCCAGTTCTCAGGACAAGACAGTACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR TCA 90 bp | ACTACCAACTTGAAATGCAATCCAAAGGCAGCAGGGTGGACAAGAGCCGTGCTACTCCTTGCTTCCGGGTaGTCAGCCAGCGGGGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: TTNLKCNPKAAGWTRAVLLLASG*SASGET Trigger: AGTCTCCCCGCTGGCTGATCACCCGGAAGCAAGGAG...TAGCACGGCTCTTGTCCACCCTGCTGCCTTTGGATTGCATTTCAAGTTGGTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR GCA 90 bp | CGAAGGACTAAACAGACAATAGGGTCACCGAGAGGAGAACTGAAAGTCTTGGCGGCCCGCCTTCCTCAGTaGCTGGTCGAACGTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RRTKQTIGSPRGELKVLAARLPQ*LVERGH Trigger: ATGCCCACGTTCGACCAGGCACTGAGGAAGGCGGGC...CGCCAAGACTTTCAGTTCTCCTCTCGGTGACCCTATTGTCTGTTTAGTCCTTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
||
| CDS-3UTR GCA 90 bp | GGCGAAGCACACTGCACAGGCATATTCCAGTCTTCTCTGGTCCTCCAGGCAACACCCCTGCCACTATATTaGTTGCCGCAAAGGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GEAHCTGIFQSSLVLQATPLPLY*LPQREG Trigger: GCCTTCCCTTTGCGGCAAGCAATATAGTGGCAGGGG...TGTTGCCTGGAGGACCAGAGAAGACTGGAATATGCCTGTGCAGTGTGCTTCGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024595.4 |
||
| 3UTR CAA 72 bp | GCTGAGCGCACTTCTGGACACGTGCCAGGCCTTGGTTaGTTCATCCTGCTTCCTGGATGGTACTGTCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AERTSGHVPGLG*FILLPGWYCLV Trigger: GACAAGACAGTACCATCCAGGAAGCAGGATGAACAAACCAAGGCCTGGCACGTGTCCAGAAGTGCGCTCAGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| 3UTR CAA 72 bp | GATCAGCTGAGCGCACTTCTGGACACGTGCCAGGCCTaGGTTTGTTCATCCTGCTTCCTGGATGGTACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DQLSALLDTCQA*VCSSCFLDGTV Trigger: GACAGTACCATCCAGGAAGCAGGATGAACAAACCAAGGCCTGGCACGTGTCCAGAAGTGCGCTCAGCTGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTTTGGACTCTCAGTCACAGGCACCCCTGGAACGGAATTCACAAATATGACAGTAGTCGGGCTGGCTaGCCAGGAAGACCACACCGA | + |
|
Preference number: 4 (lower is better) Translates to: VLWTLSHRHPWNGIHKYDSSRAG*PGRPHR Trigger: TCGGTGTGGTCTTCCTGGGCAGCCAGCCCGACTACT...GTCATATTTGTGAATTCCGTTCCAGGGGTGCCTGTGACTGAGAGTCCAAAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGCGAAGGCTTGTATTCGGAGCTCAAGGGAAGAAATAGCAGTTCTCAGACTAGTAGTCGGGCTGGCTaGCCAGGAAGACCACACCGA | + |
|
Preference number: 4 (lower is better) Translates to: PCEGLYSELKGRNSSSQTSSRAG*PGRPHR Trigger: TCGGTGTGGTCTTCCTGGGCAGCCAGCCCGACTACT...AGTCTGAGAACTGCTATTTCTTCCCTTGAGCTCCGAATACAAGCCTTCGCAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR GCA 90 bp | ACACTGCACAGGCATATTCCAGTCTTCTCTGGTCCTCCAGGCAACACAGGGGCCACATCCAGGCATTGCTaGAGACAAGGTCAAACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TLHRHIPVFSGPPGNTGATSRHC*RQGQTG Trigger: GCCAGTTTGACCTTGTCTGCAGCAATGCCTGGATGT...GGCCCCTGTGTTGCCTGGAGGACCAGAGAAGACTGGAATATGCCTGTGCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR TCA 90 bp | TGGTTTGTTCATCCTGCTTCCTGGATGGTACTGTCTTGTCCTGAGAACTGGAGACCTGCCAGCTGGGCGTaGAGTAGGCAATCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WFVHPASWMVLSCPENWRPASWA*SRQSQE Trigger: TTCCTGGGATTGCCTACTTCACGCCCAGCTGGCAGG...TCTCCAGTTCTCAGGACAAGACAGTACCATCCAGGAAGCAGGATGAACAAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR TCA 90 bp | CCCCCACACACATTGGCAAGGTTTCTCTTTGATGCTAATTTTGCCTGTCCACACCCTGCCAGCTGGGCGTaGAGTAGGCAATCCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPHTLARFLFDANFACPHPASWA*SRQSQE Trigger: TTCCTGGGATTGCCTACTTCACGCCCAGCTGGCAGG...GTGTGGACAGGCAAAATTAGCATCAAAGAGAAACCTTGCCAATGTGTGTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR CCA 90 bp | ACTACCAACTTGAAATGCAATCCAAAGGCAGCAGGGTGGACAAGAGCCGTGCTACGCATGACAAGTCCTTaGTACACCACGGCGCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTNLKCNPKAAGWTRAVLRMTSP*YTTALV Trigger: CACGAGCGCCGTGGTGTACCAAGGACTTGTCATGCG...TAGCACGGCTCTTGTCCACCCTGCTGCCTTTGGATTGCATTTCAAGTTGGTAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGCGAAGGCTTGTATTCGGAGCTCAAGGGAAGAAATAGCAGTTCTCAGACTCGCATGACAAGTCCTTaGTACACCACGGCGCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PCEGLYSELKGRNSSSQTRMTSP*YTTALV Trigger: CACGAGCGCCGTGGTGTACCAAGGACTTGTCATGCG...AGTCTGAGAACTGCTATTTCTTCCCTTGAGCTCCGAATACAAGCCTTCGCAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGCGAAGGCTTGTATTCGGAGCTCAAGGGAAGAAATAGCAGTTCTCAGACTACGCGCCTCAGGATCTaGAAGGCTTTCTCTCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: PCEGLYSELKGRNSSSQTTRLRI*KAFSPC Trigger: GCAAGGAGAGAAAGCCTTGCAGATCCTGAGGCGCGT...AGTCTGAGAACTGCTATTTCTTCCCTTGAGCTCCGAATACAAGCCTTCGCAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR GCA 90 bp | GTGCTTTGGACTCTCAGTCACAGGCACCCCTGGAACGGAATTCACAAATATGACCAGACACGACACCCCTaGCACTATATTGCTTGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: VLWTLSHRHPWNGIHKYDQTRHP*HYIACR Trigger: GCGGCAAGCAATATAGTGGCAGGGGTGTCGTGTCTG...GTCATATTTGTGAATTCCGTTCCAGGGGTGCCTGTGACTGAGAGTCCAAAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024595.4 |
||
| CDS-3UTR CCA 90 bp | AAGGCTTGTATTCGGAGCTCAAGGGAAGAAATAGCAGTTCTCAGACTCTTCAGAAGAGAGATGGCTAGCTaGATGCCCTGCCAGCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KACIRSSREEIAVLRLFRREMAS*MPCQLG Trigger: GCCCAGCTGGCAGGGCATCCAGCTAGCCATCTCTCT...TCTGAAGAGTCTGAGAACTGCTATTTCTTCCCTTGAGCTCCGAATACAAGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR GCA 90 bp | TTCATCCTGCTTCCTGGATGGTACTGTCTTGTCCTGAGAACTGGAGAACTGGTTTGCCACTATATTGCTTaGCGCAAAGGGAAGGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: FILLPGWYCLVLRTGELVCHYIA*RKGKAS Trigger: CGACGCCTTCCCTTTGCGGCAAGCAATATAGTGGCA...AACCAGTTCTCCAGTTCTCAGGACAAGACAGTACCATCCAGGAAGCAGGATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024595.4 |
||
| CDS-3UTR CCA 90 bp | GGTGAAATATCTGGGGCCTGGGGACTGCAGCATGACTTCACAATACCACAGCCAAGGGTGAAGAACATCTaGATCACGATTCCCACAATC | + |
|
Preference number: 4 (lower is better) Translates to: GEISGAWGLQHDFTIPQPRVKNI*ITIPTI Trigger: GATTGTGGGAATCGTGATCCAGATGTTCTTCACCCT...TGGCTGTGGTATTGTGAAGTCATGCTGCAGTCCCCAGGCCCCAGATATTTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR TCA 90 bp | ATTCGGAGCTCAAGGGAAGAAATAGCAGTTCTCAGACTCTTCAGAACACTCTTCTCAGGATGGCTTGGGTaGGGTCCAACATCCAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IRSSREEIAVLRLFRTLFSGWLG*GPTSRH Trigger: ATGCCTGGATGTTGGACCTCACCCAAGCCATCCTGA...GAAGAGTGTTCTGAAGAGTCTGAGAACTGCTATTTCTTCCCTTGAGCTCCGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR CCA 90 bp | AACTTGAAATGCAATCCAAAGGCAGCAGGGTGGACAAGAGCCGTGCTACAGCCAGTGCATTTCCTCATTTaGGGAGTTCTCACAAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NLKCNPKAAGWTRAVLQPVHFLI*GVLTRS Trigger: AGACCTTGTGAGAACTCCCCAAATGAGGAAATGCAC...TGGCTGTAGCACGGCTCTTGTCCACCCTGCTGCCTTTGGATTGCATTTCAAGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024595.4 |
||
| CDS-3UTR TCA 90 bp | TCCGTTCTCCTGTGCTTTATGATTAAACATCTGTCTAACAGTCACACACATCTTAGAGGAAGGCGAAGGTaGCACCCGTCAGGCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVLLCFMIKHLSNSHTHLRGRRR*HPSGTA Trigger: TGCTGTGCCTGACGGGTGTCACCTTCGCCTTCCTCT...AAGATGTGTGTGACTGTTAGACAGATGTTTAATCATAAAGCACAGGAGAACGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR TCA 90 bp | GGTGAAATATCTGGGGCCTGGGGACTGCAGCATGACTTCACAATACCACAGCCAAATCCTCCTTTGTTTTaGACCAACTATTTCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GEISGAWGLQHDFTIPQPNPPLF*TNYFCH Trigger: GTGACAGAAATAGTTGGTTCAAAACAAAGGAGGATT...TGGCTGTGGTATTGTGAAGTCATGCTGCAGTCCCCAGGCCCCAGATATTTCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR CCA 90 bp | TTCATCCTGCTTCCTGGATGGTACTGTCTTGTCCTGAGAACTGGAGAACTGGTTAGGGTGAAGAACATCTaGATCACGATTCCCACAATC | + |
|
Preference number: 4 (lower is better) Translates to: FILLPGWYCLVLRTGELVRVKNI*ITIPTI Trigger: GATTGTGGGAATCGTGATCCAGATGTTCTTCACCCT...AACCAGTTCTCCAGTTCTCAGGACAAGACAGTACCATCCAGGAAGCAGGATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR CCA 90 bp | ATTCGGAGCTCAAGGGAAGAAATAGCAGTTCTCAGACTCTTCAGAACACTCTTCGTCCAAGGCGCTCAATaGTCAGAAGGATTAAGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: IRSSREEIAVLRLFRTLFVQGAQ*SEGLRE Trigger: CTCTCTTAATCCTTCTGACCATTGAGCGCCTTGGAC...GAAGAGTGTTCTGAAGAGTCTGAGAACTGCTATTTCTTCCCTTGAGCTCCGAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024595.4 |
||
| CDS-3UTR CCA 90 bp | TGGTTTGTTCATCCTGCTTCCTGGATGGTACTGTCTTGTCCTGAGAACTGGAGACAATTTCGAAGGCCATaGTTATTCCTAGTCTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WFVHPASWMVLSCPENWRQFRRP*LFLVFP Trigger: TGGGAAGACTAGGAATAACCATGGCCTTCGAAATTG...TCTCCAGTTCTCAGGACAAGACAGTACCATCCAGGAAGCAGGATGAACAAACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024595.4 |
||
| CDS-3UTR GCA 90 bp | TGTCTAACAGTCACACACATCTTCTCCAGTGTTGCAAACATAGTATGCTCTCCACCAACATCCAGGCATTaGTGCAGACAAGGTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: CLTVTHIFSSVANIVCSPPTSRH*CRQGQT Trigger: AGTTTGACCTTGTCTGCAGCAATGCCTGGATGTTGG...TGGAGAGCATACTATGTTTGCAACACTGGAGAAGATGTGTGTGACTGTTAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR GCA 90 bp | TCCGTTCTCCTGTGCTTTATGATTAAACATCTGTCTAACAGTCACACACATCTTCCAACATCCAGGCATTaGTGCAGACAAGGTCAAACT | + |
|
Preference number: 4 (lower is better) Translates to: SVLLCFMIKHLSNSHTHLPTSRH*CRQGQT Trigger: AGTTTGACCTTGTCTGCAGCAATGCCTGGATGTTGG...AAGATGTGTGTGACTGTTAGACAGATGTTTAATCATAAAGCACAGGAGAACGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS CCA 90 bp | GCGAAGGTGACACCCGTCAGGCACAGCAGCAGGAACACGCGCCGCTaGAAGCGCCCGAACTCGCCCGCCTTCCTCAGTGCCTGGTCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: AKVTPVRHSSRNTRR*KRPNSPAFLSAWSN Trigger: GTTCGACCAGGCACTGAGGAAGGCGGGCGAGTTCGGGCGCTTCCAGCGGCGCGTGTTCCTGCTGCTGTGCCTGACGGGTGTCACCTTCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS TCA 90 bp | GCTGGCTGCCCAGGAAGACCACACCGACGAAGAGGAAGGCGAAGGTaGCACCCGTCAGGCACAGCAGCAGGAACACGCGCCGCTGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGCPGRPHRRRGRRR*HPSGTAAGTRAAGS Trigger: GCTTCCAGCGGCGCGTGTTCCTGCTGCTGTGCCTGACGGGTGTCACCTTCGCCTTCCTCTTCGTCGGTGTGGTCTTCCTGGGCAGCCAGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR CAA 90 bp | GTGGGTGTGGCAATGAATACCCCAAAGGCTGTTGGGGAACTGAGCATCACACTCGCGGTGGCAGTGGCCTaGGCCGCGGCGCTCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGVAMNTPKAVGELSITLAVAVA*AAALSW Trigger: CCAGCTGAGCGCCGCGGCCAAGGCCACTGCCACCGC...GAGTGTGATGCTCAGTTCCCCAACAGCCTTTGGGGTATTCATTGCCACACCCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGACCTCAGCACCTGCAGGAGACAGGAGGGGAGCAGCGCCGGACATGTCGGCTGCCACTATATTGCTaGCCGCAAAGGGAAGGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: LGPQHLQETGGEQRRTCRLPLYC*PQREGV Trigger: GACGCCTTCCCTTTGCGGCAAGCAATATAGTGGCAG...CCGACATGTCCGGCGCTGCTCCCCTCCTGTCTCCTGCAGGTGCTGAGGTCCCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024595.4 |
||
| CDS-3UTR CAA 90 bp | CCCTGCGAAGGCTTGTATTCGGAGCTCAAGGGAAGAAATAGCAGTTCTCAGACTGCGGTGGCAGTGGCCTaGGCCGCGGCGCTCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PCEGLYSELKGRNSSSQTAVAVA*AAALSW Trigger: CCAGCTGAGCGCCGCGGCCAAGGCCACTGCCACCGC...AGTCTGAGAACTGCTATTTCTTCCCTTGAGCTCCGAATACAAGCCTTCGCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR CAA 90 bp | GGCGAAGCACACTGCACAGGCATATTCCAGTCTTCTCTGGTCCTCCAGGCAACAAGAGGCGCGGAGCGGTaGGGGAAGGCAGTGAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GEAHCTGIFQSSLVLQATRGAER*GKAVSG Trigger: CCCACTCACTGCCTTCCCCAACCGCTCCGCGCCTCT...TGTTGCCTGGAGGACCAGAGAAGACTGGAATATGCCTGTGCAGTGTGCTTCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS CCA 90 bp | CTATATTGCTTGCCGCAAAGGGAAGGCGTCGTCCAAGGCGCTCAATaGTCAGAAGGATTAAGAGAGCTCCGGGCAGCTCCACGAGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LYCLPQREGVVQGAQ*SEGLRELRAAPRAQ Trigger: CTGGGCTCGTGGAGCTGCCCGGAGCTCTCTTAATCCTTCTGACCATTGAGCGCCTTGGACGACGCCTTCCCTTTGCGGCAAGCAATATAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024595.4 |
||
| CDS GCA 90 bp | GATGAGAGGTGTTTTCCATTGCACTTAGCCACGCGCCTCAGGATCTaGAAGGCTTTCTCTCCTTGCTTCCGGGTGATCAGCCAGCGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: DERCFPLHLATRLRI*KAFSPCFRVISQRG Trigger: TCCCCGCTGGCTGATCACCCGGAAGCAAGGAGAGAAAGCCTTGCAGATCCTGAGGCGCGTGGCTAAGTGCAATGGAAAACACCTCTCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR CAA 90 bp | TGGTTTGTTCATCCTGCTTCCTGGATGGTACTGTCTTGTCCTGAGAACTGGAGAAGAGGCGCGGAGCGGTaGGGGAAGGCAGTGAGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WFVHPASWMVLSCPENWRRGAER*GKAVSG Trigger: CCCACTCACTGCCTTCCCCAACCGCTCCGCGCCTCT...TCTCCAGTTCTCAGGACAAGACAGTACCATCCAGGAAGCAGGATGAACAAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAGGCGAAGCACACTGCACAGGCATATTCCAGTCTTCTCTGGTCCTCCAGGAAGGTTCAGGATGGCTaGGGTGAGGTCCAACATCCA | + |
|
Preference number: 5 (lower is better) Translates to: EEAKHTAQAYSSLLWSSRKVQDG*GEVQHP Trigger: TGGATGTTGGACCTCACCCAAGCCATCCTGAACCTT...CCTGGAGGACCAGAGAAGACTGGAATATGCCTGTGCAGTGTGCTTCGCCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR CAA 90 bp | GAGGAGGCGAAGCACACTGCACAGGCATATTCCAGTCTTCTCTGGTCCTCCAGGCGTGCATTTCCTCATTaGGGGAGTTCTCACAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: EEAKHTAQAYSSLLWSSRRAFPH*GSSHKV Trigger: GACCTTGTGAGAACTCCCCAAATGAGGAAATGCACG...CCTGGAGGACCAGAGAAGACTGGAATATGCCTGTGCAGTGTGCTTCGCCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024595.4 |
||
| CDS-3UTR CAA 90 bp | GTGCTTTGGACTCTCAGTCACAGGCACCCCTGGAACGGAATTCACAAATATGACGCGCATGACAAGTCCTaGGTACACCACGGCGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: VLWTLSHRHPWNGIHKYDAHDKS*VHHGAR Trigger: ACGAGCGCCGTGGTGTACCAAGGACTTGTCATGCGC...GTCATATTTGTGAATTCCGTTCCAGGGGTGCCTGTGACTGAGAGTCCAAAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR CAA 90 bp | TGGTTTGTTCATCCTGCTTCCTGGATGGTACTGTCTTGTCCTGAGAACTGGAGAGCGCATGACAAGTCCTaGGTACACCACGGCGCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: WFVHPASWMVLSCPENWRAHDKS*VHHGAR Trigger: ACGAGCGCCGTGGTGTACCAAGGACTTGTCATGCGC...TCTCCAGTTCTCAGGACAAGACAGTACCATCCAGGAAGCAGGATGAACAAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR CAA 90 bp | CCCTGCGAAGGCTTGTATTCGGAGCTCAAGGGAAGAAATAGCAGTTCTCAGACTACCCCTGCCACTATATaGCTTGCCGCAAAGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PCEGLYSELKGRNSSSQTTPATI*LAAKGR Trigger: CCTTCCCTTTGCGGCAAGCAATATAGTGGCAGGGGT...AGTCTGAGAACTGCTATTTCTTCCCTTGAGCTCCGAATACAAGCCTTCGCAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024595.4 |
||
| CDS-3UTR CAA 90 bp | CGAAGGACTAAACAGACAATAGGGTCACCGAGAGGAGAACTGAAAGTCTTGGCGAAGGTTCAGGATGGCTaGGGTGAGGTCCAACATCCA | + |
|
Preference number: 5 (lower is better) Translates to: RRTKQTIGSPRGELKVLAKVQDG*GEVQHP Trigger: TGGATGTTGGACCTCACCCAAGCCATCCTGAACCTT...CGCCAAGACTTTCAGTTCTCCTCTCGGTGACCCTATTGTCTGTTTAGTCCTTCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
||
| CDS-3UTR CAA 90 bp | ATTCGGAGCTCAAGGGAAGAAATAGCAGTTCTCAGACTCTTCAGAACACTCTTCTCCAACATCCAGGCATaGCTGCAGACAAGGTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IRSSREEIAVLRLFRTLFSNIQA*LQTRSN Trigger: GTTTGACCTTGTCTGCAGCAATGCCTGGATGTTGGA...GAAGAGTGTTCTGAAGAGTCTGAGAACTGCTATTTCTTCCCTTGAGCTCCGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS TCA 90 bp | GGTGAAGAACATCTGGATCACGATTCCCACAATCCTCCTTTGTTTTaGACCAACTATTTCTGTCACGATCACGAAGCAAGTCATCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GEEHLDHDSHNPPLF*TNYFCHDHEASHPG Trigger: GCCTGGATGACTTGCTTCGTGATCGTGACAGAAATAGTTGGTTCAAAACAAAGGAGGATTGTGGGAATCGTGATCCAGATGTTCTTCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS CCA 90 bp | CTCGTGAACCAAGCAAACATAAGGATGAGCGTGCATTTCCTCATTTaGGGAGTTCTCACAAGGTCTAAACAGGATGGGTTACTGACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVNQANIRMSVHFLI*GVLTRSKQDGLLTS Trigger: AGAAGTCAGTAACCCATCCTGTTTAGACCTTGTGAGAACTCCCCAAATGAGGAAATGCACGCTCATCCTTATGTTTGCTTGGTTCACGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024595.4 |
||
| CDS-3UTR CAA 90 bp | ATGGTACTGTCTTGTCCTGAGAACTGGAGAACTGGTTGGGGCCTTTTCATCTCTCAATCCTCCTTTGTTTaGAACCAACTATTTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: MVLSCPENWRTGWGLFISQSSFV*NQLFLS Trigger: TGACAGAAATAGTTGGTTCAAAACAAAGGAGGATTG...AGAGATGAAAAGGCCCCAACCAGTTCTCCAGTTCTCAGGACAAGACAGTACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCAAGGGAAGAAATAGCAGTTCTCAGACTCTTCAGAACACTCTTCACTGCGAGTTCCGTAATGTCGTaGGGTACAACTCTGAATTTA | + |
|
Preference number: 5 (lower is better) Translates to: SSREEIAVLRLFRTLFTASSVMS*GTTLNL Trigger: TAAATTCAGAGTTGTACCCAACGACATTACGGAACT...CGCAGTGAAGAGTGTTCTGAAGAGTCTGAGAACTGCTATTTCTTCCCTTGAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024595.4 |
||
| CDS-3UTR CAA 90 bp | ATTCGGAGCTCAAGGGAAGAAATAGCAGTTCTCAGACTCTTCAGAACACTCTTCGAACCTCTGAGTAATTaGATGAGAGGTGTTTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: IRSSREEIAVLRLFRTLFEPLSN*MRGVFH Trigger: ATGGAAAACACCTCTCATCAAATTACTCAGAGGTTC...GAAGAGTGTTCTGAAGAGTCTGAGAACTGCTATTTCTTCCCTTGAGCTCCGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGTGAAACCCCAAAGTTCCGTAATGTCGTTGGGTACAACTCTGAATTTACAATCCTCCTTTGTTTaGAACCAACTATTTCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRVKPQSSVMSLGTTLNLQSSFV*NQLFLS Trigger: TGACAGAAATAGTTGGTTCAAAACAAAGGAGGATTG...TAAATTCAGAGTTGTACCCAACGACATTACGGAACTTTGGGGTTTCACTCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233535.2 |
||
| CDS CCA 72 bp | ACACCCGTCAGGCACAGCAGCAGGAACACGCGCCGCTaGAAGCGCCCGAACTCGCCCGCCTTCCTCAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TPVRHSSRNTRR*KRPNSPAFLSA Trigger: GGCACTGAGGAAGGCGGGCGAGTTCGGGCGCTTCCAGCGGCGCGTGTTCCTGCTGCTGTGCCTGACGGGTGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS CCA 72 bp | TGGCAGTGGCCTTGGCCGCGGCGCTCAGCTGGGACGTaGAGCTCCGGTGTGGTGAGGTTCCACTCCTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: WQWPWPRRSAGT*SSGVVRFHSSS Trigger: CGAGGAGGAGTGGAACCTCACCACACCGGAGCTCCACGTCCCAGCTGAGCGCCGCGGCCAAGGCCACTGCCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS CAA 72 bp | ATTAGTGGCTTCCAGCAGGTAGCGGTGGCAGTGGCCTaGGCCGCGGCGCTCAGCTGGGACGTGGAGCTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: ISGFQQVAVAVA*AAALSWDVELR Trigger: CCGGAGCTCCACGTCCCAGCTGAGCGCCGCGGCCAAGGCCACTGCCACCGCTACCTGCTGGAAGCCACTAAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS GCA 72 bp | CGCGCGGCCCGCGACACCAATAGTAGTCGGGCTGGCTaGCCAGGAAGACCACACCGACGAAGAGGAAGGCGA | + |
|
Preference number: 6 (lower is better) Translates to: RAARDTNSSRAG*PGRPHRRRGRR Trigger: TCGCCTTCCTCTTCGTCGGTGTGGTCTTCCTGGGCAGCCAGCCCGACTACTATTGGTGTCGCGGGCCGCGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS TCA 72 bp | CCAGGAAGACCACACCGACGAAGAGGAAGGCGAAGGTaGCACCCGTCAGGCACAGCAGCAGGAACACGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGRPHRRRGRRR*HPSGTAAGTRA Trigger: GGCGCGTGTTCCTGCTGCTGTGCCTGACGGGTGTCACCTTCGCCTTCCTCTTCGTCGGTGTGGTCTTCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS TCA 72 bp | CCCCAGCCAGGAAGCCAAGGTTCAGGATGGCTTGGGTaGGGTCCAACATCCAGGCATTGCTGCAGACAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: PQPGSQGSGWLG*GPTSRHCCRQG Trigger: ACCTTGTCTGCAGCAATGCCTGGATGTTGGACCTCACCCAAGCCATCCTGAACCTTGGCTTCCTGGCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS CCA 72 bp | TTGCCGCAAAGGGAAGGCGTCGTCCAAGGCGCTCAATaGTCAGAAGGATTAAGAGAGCTCCGGGCAGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LPQREGVVQGAQ*SEGLRELRAAP Trigger: TGGAGCTGCCCGGAGCTCTCTTAATCCTTCTGACCATTGAGCGCCTTGGACGACGCCTTCCCTTTGCGGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024595.4 |
||
| CDS GCA 72 bp | AGTGACCAGACACGACACCCCTGCCACTATATTGCTTaGCGCAAAGGGAAGGCGTCGTCCAAGGCGCTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: SDQTRHPCHYIA*RKGKASSKALN Trigger: ATTGAGCGCCTTGGACGACGCCTTCCCTTTGCGGCAAGCAATATAGTGGCAGGGGTGTCGTGTCTGGTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024595.4 |
||
| CDS CAA 90 bp | GCCCAAGGTAAAAGCCCCAGCCAGGAAGCCAAGGTTCAGGATGGCTaGGGTGAGGTCCAACATCCAGGCATTGCTGCAGACAAGGTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: AQGKSPSQEAKVQDG*GEVQHPGIAADKVK Trigger: TTTGACCTTGTCTGCAGCAATGCCTGGATGTTGGACCTCACCCAAGCCATCCTGAACCTTGGCTTCCTGGCTGGGGCTTTTACCTTGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS CAA 90 bp | AAGCCAAGGTTCAGGATGGCTTGGGTGAGGTCCAACATCCAGGCATaGCTGCAGACAAGGTCAAACTGGCTGACGATGGTAGAGTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: KPRFRMAWVRSNIQA*LQTRSNWLTMVEWV Trigger: GACCCACTCTACCATCGTCAGCCAGTTTGACCTTGTCTGCAGCAATGCCTGGATGTTGGACCTCACCCAAGCCATCCTGAACCTTGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
||
| CDS CAA 90 bp | TCTGGTAAAAATGCAGTGACCAGACACGACACCCCTGCCACTATATaGCTTGCCGCAAAGGGAAGGCGTCGTCCAAGGCGCTCAATGGTC | + |
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Preference number: 6 (lower is better) Translates to: SGKNAVTRHDTPATI*LAAKGRRRPRRSMV Trigger: GACCATTGAGCGCCTTGGACGACGCCTTCCCTTTGCGGCAAGCAATATAGTGGCAGGGGTGTCGTGTCTGGTCACTGCATTTTTACCAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000024595.4 |
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| CDS GCA 72 bp | TGTTTTCCATTGCACTTAGCCACGCGCCTCAGGATCTaGAAGGCTTTCTCTCCTTGCTTCCGGGTGATCAGC | + |
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Preference number: 6 (lower is better) Translates to: CFPLHLATRLRI*KAFSPCFRVIS Trigger: GCTGATCACCCGGAAGCAAGGAGAGAAAGCCTTGCAGATCCTGAGGCGCGTGGCTAAGTGCAATGGAAAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| CDS CAA 72 bp | TTCAGGATGGCTTGGGTGAGGTCCAACATCCAGGCATaGCTGCAGACAAGGTCAAACTGGCTGACGATGGTA | + |
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Preference number: 6 (lower is better) Translates to: FRMAWVRSNIQA*LQTRSNWLTMV Trigger: TACCATCGTCAGCCAGTTTGACCTTGTCTGCAGCAATGCCTGGATGTTGGACCTCACCCAAGCCATCCTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| CDS GCA 72 bp | GCGGAAAATCACAAACACAGAAAAATTTGGCGCAAATaGCACCACGACTCCTGTGATGCCAACGCCGAAACA | + |
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Preference number: 6 (lower is better) Translates to: AENHKHRKIWRK*HHDSCDANAET Trigger: TGTTTCGGCGTTGGCATCACAGGAGTCGTGGTGGCATTTGCGCCAAATTTTTCTGTGTTTGTGATTTTCCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| CDS CCA 72 bp | CCAGGAAGAATAATGATCCCGAGGGTGAAGAACATCTaGATCACGATTCCCACAATCCTCCTTTGTTTTGAA | + |
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Preference number: 6 (lower is better) Translates to: PGRIMIPRVKNI*ITIPTILLCFE Trigger: TTCAAAACAAAGGAGGATTGTGGGAATCGTGATCCAGATGTTCTTCACCCTCGGGATCATTATTCTTCCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| CDS CCA 72 bp | CAAGCAAACATAAGGATGAGCGTGCATTTCCTCATTTaGGGAGTTCTCACAAGGTCTAAACAGGATGGGTTA | + |
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Preference number: 6 (lower is better) Translates to: QANIRMSVHFLI*GVLTRSKQDGL Trigger: TAACCCATCCTGTTTAGACCTTGTGAGAACTCCCCAAATGAGGAAATGCACGCTCATCCTTATGTTTGCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024595.4 |
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| CDS TCA 72 bp | CATCTGGATCACGATTCCCACAATCCTCCTTTGTTTTaGACCAACTATTTCTGTCACGATCACGAAGCAAGT | + |
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Preference number: 6 (lower is better) Translates to: HLDHDSHNPPLF*TNYFCHDHEAS Trigger: ACTTGCTTCGTGATCGTGACAGAAATAGTTGGTTCAAAACAAAGGAGGATTGTGGGAATCGTGATCCAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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| CDS CAA 72 bp | ACATCTGGATCACGATTCCCACAATCCTCCTTTGTTTaGAACCAACTATTTCTGTCACGATCACGAAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: TSGSRFPQSSFV*NQLFLSRSRSK Trigger: CTTGCTTCGTGATCGTGACAGAAATAGTTGGTTCAAAACAAAGGAGGATTGTGGGAATCGTGATCCAGATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024595.4 ENSMUST00000233535.2 |
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