Pregenerated sensors for SLC22A28 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063590Ensembl transcript IDs: ENSMUST00000065651.5
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AATCATCTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATGGGGCCCAGCAGCGATaGTTGGGAATGGCTGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: NHLGKLSPCPEYNFLLLDGAQQR*LGMAAV Trigger: TACTGCAGCCATTCCCAATCATCGCTGCTGGGCCCC...ATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAGATGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR TCA 90 bp | CATCTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGCCTCCCAAACCTGTCTaGCAAATGGCCACATATGAT | + |
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Preference number: 4 (lower is better) Translates to: HLGKLSPCPEYNFLLLDQPPKPV*QMATYD Trigger: ATCATATGTGGCCATTTGTCAGACAGGTTTGGGAGG...CTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR TCA 90 bp | AATCATCTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATTTCCCCTCAGGGACATaGGAACCAGCTGGGTTATTC | + |
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Preference number: 4 (lower is better) Translates to: NHLGKLSPCPEYNFLLLDFPSGT*EPAGLF Trigger: GAATAACCCAGCTGGTTCTCATGTCCCTGAGGGGAA...ATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAGATGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR TCA 90 bp | CTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGATGCTCAGGTGTTGGAGGTaGAGTGATAGGCCAAAAATA | + |
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Preference number: 4 (lower is better) Translates to: LGKLSPCPEYNFLLLDQMLRCWR*SDRPKI Trigger: TATTTTTGGCCTATCACTTCACCTCCAACACCTGAG...CATCTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR TCA 90 bp | TTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGATGACAATTCCAGAGTCAGGAAGAGGTTaGTTCTTGGTTTCAGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: LSPCPEYNFLLLDQMTIPESGRG*FLVSGR Trigger: CCTTCCTGAAACCAAGAATCAACCTCTTCCTGACTC...TGGAATTGTCATCTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR TCA 90 bp | TTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGATGACAATTCCAAGGGTCTGCATTTCTTaGGGTACAAATACAGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: LSPCPEYNFLLLDQMTIPRVCIS*GTNTAV Trigger: GACTGCTGTATTTGTACCTCAAGAAATGCAGACCCT...TGGAATTGTCATCTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR TCA 90 bp | CTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGATGCTCCTTTGCTTGTCTTaGGTCTTTCCAATCATTTCC | + |
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Preference number: 4 (lower is better) Translates to: LGKLSPCPEYNFLLLDQMLLCLS*VFPIIS Trigger: GGAAATGATTGGAAAGACTCAAGACAAGCAAAGGAG...CATCTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR TCA 90 bp | CATCTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGATTCTACGTCCCATGTaGTTAAGAACAAAATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: HLGKLSPCPEYNFLLLDQILRPM*LRTKCP Trigger: TGGACATTTTGTTCTTAATCACATGGGACGTAGAAT...CTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR GCA 90 bp | AATCATCTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATAGCAACAGAATTAAGTaGCTGAGATTCACACACCAG | + |
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Preference number: 4 (lower is better) Translates to: NHLGKLSPCPEYNFLLLDSNRIK*LRFTHQ Trigger: CTGGTGTGTGAATCTCAGGCACTTAATTCTGTTGCT...ATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAGATGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR CCA 90 bp | CATCTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGTACTATTTACTGATATaGGTTCCACAGACATTCCTG | + |
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Preference number: 4 (lower is better) Translates to: HLGKLSPCPEYNFLLLDQYYLLI*VPQTFL Trigger: CAGGAATGTCTGTGGAACCCATATCAGTAAATAGTA...CTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAGATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR GCA 90 bp | CATCTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGAGATTTTCTCTTTGCTaGCTCAAGTTCATTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: HLGKLSPCPEYNFLLLDQRFSLC*LKFILH Trigger: ATGAAGAATGAACTTGAGGCAGCAAAGAGAAAATCT...CTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAGATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR GCA 90 bp | AATCATCTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATAGAAGAAAGTGCTGCTaGCAATGTGACCACAATAAT | + |
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Preference number: 4 (lower is better) Translates to: NHLGKLSPCPEYNFLLLDRRKCC*QCDHNN Trigger: ATTATTGTGGTCACATTGGCAGCAGCACTTTCTTCT...ATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAGATGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR CCA 90 bp | AATCATCTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATGTGGAACAAGTCTCTTaGAGAAGATTTTCTCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: NHLGKLSPCPEYNFLLLDVEQVS*RRFSLC Trigger: GCAAAGAGAAAATCTTCTCCAAGAGACTTGTTCCAC...ATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAGATGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR TCA 90 bp | AATCATCTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAAGTTACTATTTACTaGTATGGGTTCCACAGACAT | + |
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Preference number: 4 (lower is better) Translates to: NHLGKLSPCPEYNFLLLDQVTIY*YGFHRH Trigger: ATGTCTGTGGAACCCATATCAGTAAATAGTAACTTG...ATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAGATGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS TCA 90 bp | GCTGCTGCCAATGTGACCACAATAATACGCAGGGTCTGCATTTCTTaGGGTACAAATACAGCAGTCAACATGAAGATTCCCCTCAGGGAC | + |
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Preference number: 5 (lower is better) Translates to: AAANVTTIIRRVCIS*GTNTAVNMKIPLRD Trigger: GTCCCTGAGGGGAATCTTCATGTTGACTGCTGTATTTGTACCTCAAGAAATGCAGACCCTGCGTATTATTGTGGTCACATTGGCAGCAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR CAA 90 bp | CTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGATGCCCTTCTGGGGTTTGTaGGTCACAATCAGCCACCGA | + |
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Preference number: 5 (lower is better) Translates to: LGKLSPCPEYNFLLLDQMPFWGL*VTISHR Trigger: TCGGTGGCTGATTGTGACCAACAAACCCCAGAAGGG...CATCTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR CAA 90 bp | AATCATCTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATTCAGAGGCAGTGTCATaGTCAAGGATGGGGGCCCAG | + |
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Preference number: 5 (lower is better) Translates to: NHLGKLSPCPEYNFLLLDSEAVS*SRMGAQ Trigger: CTGGGCCCCCATCCTTGACAATGACACTGCCTCTGA...ATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAGATGATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS TCA 90 bp | CCCCTCAGGGACATGAGAACCAGCTGGGTTATTCTACGTCCCATGTaGTTAAGAACAAAATGTCCAATAACACTAATTAGTATGCCCAAT | + |
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Preference number: 5 (lower is better) Translates to: PLRDMRTSWVILRPM*LRTKCPITLISMPN Trigger: ATTGGGCATACTAATTAGTGTTATTGGACATTTTGTTCTTAATCACATGGGACGTAGAATAACCCAGCTGGTTCTCATGTCCCTGAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR CAA 90 bp | AATCATCTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATTTATCCAGTCTCAGGTaGGAATCCAGGGGGATGGAG | + |
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Preference number: 5 (lower is better) Translates to: NHLGKLSPCPEYNFLLLDLSSLR*ESRGME Trigger: CTCCATCCCCCTGGATTCCAACCTGAGACTGGATAA...ATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAGATGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR CAA 90 bp | CTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGATGAAGATGCCACTGTGGTaGGGCAAAACGACGACATTT | + |
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Preference number: 5 (lower is better) Translates to: LGKLSPCPEYNFLLLDQMKMPLW*GKTTTF Trigger: AAATGTCGTCGTTTTGCCCAACCACAGTGGCATCTT...CATCTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR CAA 90 bp | CATCTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGTGGAATCCTCCTCCTTaGCTTGTCTTGAGTCTTTCC | + |
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Preference number: 5 (lower is better) Translates to: HLGKLSPCPEYNFLLLDQWNPPP*LVLSLS Trigger: GGAAAGACTCAAGACAAGCAAAGGAGGAGGATTCCA...CTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS TCA 90 bp | AGTATAAAGAAGAAGAATATTGGCACAGACATTGCTAGCTGGAGGTaGTGCCAGATTCTAAATAGAAAAGCCAGGCCTGCCAATATCATG | + |
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Preference number: 5 (lower is better) Translates to: SIKKKNIGTDIASWR*CQILNRKARPANIM Trigger: CATGATATTGGCAGGCCTGGCTTTTCTATTTAGAATCTGGCATCACCTCCAGCTAGCAATGTCTGTGCCAATATTCTTCTTCTTTATACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS TCA 90 bp | CCCATACCTGTTGCCCTTAATGTGGTTGGAAGTAGCTCATTTATATaGAGATTACTAACACACATACATAGAGAAGAAAGTGCTGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: PIPVALNVVGSSSFI*RLLTHIHREESAAA Trigger: GGCAGCAGCACTTTCTTCTCTATGTATGTGTGTTAGTAATCTTCATATAAATGAGCTACTTCCAACCACATTAAGGGCAACAGGTATGGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR CAA 90 bp | CTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGATGCAGGGTCTGCATTTCTaGAGGTACAAATACAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: LGKLSPCPEYNFLLLDQMQGLHF*RYKYSS Trigger: ACTGCTGTATTTGTACCTCAAGAAATGCAGACCCTG...CATCTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR CAA 90 bp | GGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGATGACATCTGGCTCTGTCTCATaGGAGAAAGTGCCATTCAAA | + |
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Preference number: 5 (lower is better) Translates to: GKLSPCPEYNFLLLDQMTSGSVS*EKVPFK Trigger: TTTGAATGGCACTTTCTCCAATGAGACAGAGCCAGA...TGTCATCTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR CAA 90 bp | GGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGATGACAATGGTAGAAAGGAAGTaGCTCCTGTCATACACCCAA | + |
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Preference number: 5 (lower is better) Translates to: GKLSPCPEYNFLLLDQMTMVERK*LLSYTQ Trigger: TTGGGTGTATGACAGGAGCAACTTCCTTTCTACCAT...TGTCATCTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR CAA 90 bp | GGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGATGACAGTTCATTCTTCATACTaGCTTCCACAACCTCCATGG | + |
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Preference number: 5 (lower is better) Translates to: GKLSPCPEYNFLLLDQMTVHSSY*LPQPPW Trigger: CCATGGAGGTTGTGGAAGCAAGTATGAAGAATGAAC...TGTCATCTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR CAA 90 bp | AATCATCTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATAAGATCCAGGGCAAGTaGGCAGAGTATGTTGCTAAC | + |
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Preference number: 5 (lower is better) Translates to: NHLGKLSPCPEYNFLLLDKIQGK*AEYVAN Trigger: GTTAGCAACATACTCTGCCAACTTGCCCTGGATCTT...ATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAGATGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR CAA 90 bp | GGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGATGACACCTCCTTTGCTTGTCTaGAGTCTTTCCAATCATTTC | + |
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Preference number: 5 (lower is better) Translates to: GKLSPCPEYNFLLLDQMTPPLLV*SLSNHF Trigger: GAAATGATTGGAAAGACTCAAGACAAGCAAAGGAGG...TGTCATCTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR CAA 90 bp | GGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGATGACAGAGAAGATTTTCTCTTaGCTGCCTCAAGTTCATTCT | + |
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Preference number: 5 (lower is better) Translates to: GKLSPCPEYNFLLLDQMTEKIFS*LPQVHS Trigger: AGAATGAACTTGAGGCAGCAAAGAGAAAATCTTCTC...TGTCATCTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR CAA 90 bp | AATCATCTGGGAAAATTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATTGTGGAACAAGTCTCTaGGAGAAGATTTTCTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: NHLGKLSPCPEYNFLLLDCGTSL*EKIFSL Trigger: CAAAGAGAAAATCTTCTCCAAGAGACTTGTTCCACA...ATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAATTTTCCCAGATGATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS-3UTR CAA 90 bp | TTGTCACCATGTCCTGAATACAATTTTCTTCTCTTGGATCAGATGACAATTCCATTGCCCTTAATGTGGTaGGAAGTAGCTCATTTATAT | + |
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Preference number: 5 (lower is better) Translates to: LSPCPEYNFLLLDQMTIPLPLMW*EVAHLY Trigger: ATATAAATGAGCTACTTCCAACCACATTAAGGGCAA...TGGAATTGTCATCTGATCCAAGAGAAGAAAATTGTATTCAGGACATGGTGACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS TCA 90 bp | CTGAGAAACCGCAACAGGATAATATTAGTACTCAGGTGTTGGAGGTaGAGTGATAGGCCAAAAATAGATACTGTAAATAAATATCTCATA | + |
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Preference number: 5 (lower is better) Translates to: LRNRNRIILVLRCWR*SDRPKIDTVNKYLI Trigger: TATGAGATATTTATTTACAGTATCTATTTTTGGCCTATCACTTCACCTCCAACACCTGAGTACTAATATTATCCTGTTGCGGTTTCTCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS GCA 72 bp | AGATCCTCAGGAGGTCATCTTGGCTCAGGATCCTACTaGCATTATCAGAGGCAGTGTCATTGTCAAGGATGG | + |
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Preference number: 6 (lower is better) Translates to: RSSGGHLGSGSY*HYQRQCHCQGW Trigger: CCATCCTTGACAATGACACTGCCTCTGATAATGGCAGTAGGATCCTGAGCCAAGATGACCTCCTGAGGATCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS CAA 90 bp | TGCTGCTGCCAATGTGACCACAATAATACGCAGGGTCTGCATTTCTaGAGGTACAAATACAGCAGTCAACATGAAGATTCCCCTCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: CCCQCDHNNTQGLHF*RYKYSSQHEDSPQG Trigger: TCCCTGAGGGGAATCTTCATGTTGACTGCTGTATTTGTACCTCAAGAAATGCAGACCCTGCGTATTATTGTGGTCACATTGGCAGCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS TCA 72 bp | GGGCCAGGAATAATCCACTATTACCAAACATTCCAATaGCTCCCATACCTGTTGCCCTTAATGTGGTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: GPGIIHYYQTFQ*LPYLLPLMWLE Trigger: TTCCAACCACATTAAGGGCAACAGGTATGGGAGTCATTGGAATGTTTGGTAATAGTGGATTATTCCTGGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS CAA 72 bp | TCCGATTTCGTAAGATGGGTGTGTGGAACAAGTCTCTaGGAGAAGATTTTCTCTTTGCTGCCTCAAGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: SDFVRWVCGTSL*EKIFSLLPQVH Trigger: ATGAACTTGAGGCAGCAAAGAGAAAATCTTCTCCAAGAGACTTGTTCCACACACCCATCTTACGAAATCGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS TCA 72 bp | AATGTGACCACAATAATACGCAGGGTCTGCATTTCTTaGGGTACAAATACAGCAGTCAACATGAAGATTCCC | + |
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Preference number: 6 (lower is better) Translates to: NVTTIIRRVCIS*GTNTAVNMKIP Trigger: GGGAATCTTCATGTTGACTGCTGTATTTGTACCTCAAGAAATGCAGACCCTGCGTATTATTGTGGTCACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS CAA 72 bp | ATTTTCTCTTTGCTGCCTCAAGTTCATTCTTCATACTaGCTTCCACAACCTCCATGGTTAGGGTATTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: IFSLLPQVHSSY*LPQPPWLGYFQ Trigger: CTGGAAATACCCTAACCATGGAGGTTGTGGAAGCAAGTATGAAGAATGAACTTGAGGCAGCAAAGAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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| CDS TCA 72 bp | CGCAACAGGATAATATTAGTACTCAGGTGTTGGAGGTaGAGTGATAGGCCAAAAATAGATACTGTAAATAAA | + |
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Preference number: 6 (lower is better) Translates to: RNRIILVLRCWR*SDRPKIDTVNK Trigger: TTTATTTACAGTATCTATTTTTGGCCTATCACTTCACCTCCAACACCTGAGTACTAATATTATCCTGTTGCG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000065651.5 |
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