Pregenerated sensors for SLC22A27 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067656Ensembl transcript IDs: ENSMUST00000075619.5, ENSMUST00000182102.8
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAATTGTCGCCATGTTCTaGATACCATTTTCTTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGIVAMF*IPFSSL Trigger: AAGAGAAGAAAATGGTATTCAGAACATGGCGACAAT...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAGTAGCAATTCCAGTGTaGTCAGTTTTCTGTTTTATC | + |
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Preference number: 2 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGVAIPV*SVFCFI Trigger: GATAAAACAGAAAACTGATCACACTGGAATTGCTAC...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR TCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAGGGACCCAGCAGCGATaGTTGGGAATGGCTGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGGTQQR*LGMAAV Trigger: TACTGCAGCCATTCCCAATCATCGCTGCTGGGTCCC...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR CCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGACCTTCTGGGGTTTGTTaGTCACAATCAGCCACCGAG | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGPSGVC*SQSATE Trigger: CTCGGTGGCTGATTGTGACCAACAAACCCCAGAAGG...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR TCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAGAAGTGAGCAGTAGATaGAGAAGGAGGGGGCAAAAG | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGEVSSR*RRRGQK Trigger: CTTTTGCCCCCTCCTTCTTCATCTACTGCTCACTTC...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000075619.5 |
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| CDS-3UTR TCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGACTCAGGTGTTGGAGGTaGACTGCCAGGCCAAAAATT | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGLRCWR*TARPKI Trigger: AATTTTTGGCCTGGCAGTTCACCTCCAACACCTGAG...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR TCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGATACCAAAGAACCCAATaGCTCCTACAGCTGTTGCCC | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGYQRTQ*LLQLLP Trigger: GGGCAACAGCTGTAGGAGTCATTGGGTTCTTTGGTA...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR CCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAAGATGCCACTGTGGTTaGGCAAAACGACGACACTTC | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGRCHCG*AKRRHF Trigger: GAAGTGTCGTCGTTTTGCCCAACCACAGTGGCATCT...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR TCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGATGCCAGGAATCGAAGTaGGCAGTAGATGAAGAAGGA | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGCQESK*AVDEEG Trigger: TCCTTCTTCATCTACTGCTCACTTCGATTCCTGGCA...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075619.5 |
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| CDS-3UTR CCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGACTGTTGCCCTTAGTGTaGTTGGGAGTAGCTCATTTG | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGLLPLV*LGVAHL Trigger: CAAATGAGCTACTCCCAACCACACTAAGGGCAACAG...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR CCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGATTCCTACATCATGGGTaGAGTCAGGAAGAGGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGFLHHG*SQEEAD Trigger: ATCAGCCTCTTCCTGACTCCACCCATGATGTAGGAA...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR GCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGATGCTGCCTCAAGTTCTaGCTTCATACTTGTTCTCAC | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGCCLKF*LHTCSH Trigger: GTGAGAACAAGTATGAAGGCAGAACTTGAGGCAGCA...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR CCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGATCCTTTAAGCCCTTCTaGGGTTTGTTGGTCACAATC | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGSFKPF*GLLVTI Trigger: GATTGTGACCAACAAACCCCAGAAGGGCTTAAAGGA...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR TCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAAAAGTGCCATTCAAATaGAGAAGATGCCACTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGKVPFK*RRCHCG Trigger: ACCACAGTGGCATCTTCTTCATTTGAATGGCACTTT...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR TCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAAAGCACATGTTAAAATaGACTTCCTCCCAAGCCTGT | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGKHMLK*TSSQAC Trigger: ACAGGCTTGGGAGGAAGTTCATTTTAACATGTGCTT...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075619.5 |
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| CDS-3UTR TCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAATACAGCAATCAGAATaGAGATTCCCCTCAGAGACA | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGIQQSE*RFPSET Trigger: TGTCTCTGAGGGGAATCTTCATTCTGATTGCTGTAT...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR TCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAAGGGTCTGCATTTCTTaGGGTACAAATACAGCAATC | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGRVCIS*GTNTAI Trigger: GATTGCTGTATTTGTACCTCAAGAAATGCAGACCCT...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR GCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAATGATTGGGAATGGCTaGAGTAAAGTTCTCCATTGC | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGMIGNG*SKVLHC Trigger: GCAATGGAGAACTTTACTGCAGCCATTCCCAATCAT...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR GCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAAGTGACAGAATTCAGTaGCTGGGATTCACATACCAA | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGSDRIQ*LGFTYQ Trigger: TTGGTATGTGAATCCCAGGCACTGAATTCTGTCACT...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR GCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAAGAAGGTTTAGTCTTTaGTGCCTCAAGTTCTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGRRFSL*CLKFCL Trigger: AAGGCAGAACTTGAGGCAGCAAAGACTAAACCTTCT...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR CCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGACTGGCTCTGACACATTaGAGAAAGTGCCATTCAAAT | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGLALTH*RKCHSN Trigger: ATTTGAATGGCACTTTCTCCAATGTGTCAGAGCCAG...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR TCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAAAAAGCCAGGCCTGCTaGTATCATGTATCCAATATT | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGKSQAC*YHVSNI Trigger: AATATTGGATACATGATATCAGCAGGCCTGGCTTTT...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000075619.5 |
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| CDS-3UTR TCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGACTACACAGGTTTCAGTaGTGGCAAATTGTAATAAAG | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGLHRFQ*WQIVIK Trigger: CTTTATTACAATTTGCCATCACTGAAACCTGTGTAG...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075619.5 |
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| CDS-3UTR CCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAGACTATTTACTAATATaGGTTCCACAGACAATCCTG | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGDYLLI*VPQTIL Trigger: CAGGATTGTCTGTGGAACCCATATTAGTAAATAGTC...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075619.5 |
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| CDS-3UTR GCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAAGTAAAGTTCTCCATTaGAATATGAGGTACCACAAT | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGSKVLH*NMRYHN Trigger: ATTGTGGTACCTCATATTGCAATGGAGAACTTTACT...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR GCA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAAGAAGAAATTCCTTCTaGCAATGTGGCCATAATAAT | + |
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Preference number: 4 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGRRNSF*QCGHNN Trigger: ATTATTATGGCCACATTGGCAGAAGGAATTTCTTCT...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS TCA 90 bp | CCTACAGCTGTTGCCCTTAGTGTGGTTGGGAGTAGCTCATTTGTATaGAGACGACTAACACCCACACACAGAGAAGAAATTCCTTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: PTAVALSVVGSSSFV*RRLTPTHREEIPSA Trigger: GGCAGAAGGAATTTCTTCTCTGTGTGTGGGTGTTAGTCGTCTTCATACAAATGAGCTACTCCCAACCACACTAAGGGCAACAGCTGTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR CAA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAATTAGAACTCAGGTGTaGGAGGTGAACTGCCAGGCC | + |
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Preference number: 5 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGIRTQV*EVNCQA Trigger: GGCCTGGCAGTTCACCTCCAACACCTGAGTTCTAAT...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS CCA 90 bp | AATAGGCCAATCATGAATGAAAATTTAGTGACAGAATTCAGTGCCTaGGATTCACATACCAAGTCCCACTCAGTCACAATGGTAGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: NRPIMNENLVTEFSA*DSHTKSHSVTMVER Trigger: CCTTTCTACCATTGTGACTGAGTGGGACTTGGTATGTGAATCCCAGGCACTGAATTCTGTCACTAAATTTTCATTCATGATTGGCCTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR CAA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAAAGATGCCACTGTGGTaGGGCAAAACGACGACACTT | + |
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Preference number: 5 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGKMPLW*GKTTTL Trigger: AAGTGTCGTCGTTTTGCCCAACCACAGTGGCATCTT...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS-3UTR CAA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAAACACAGTAAACGCGTaGAAGATGGAGAAGCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGNTVNA*KMEKPP Trigger: TGGAGGCTTCTCCATCTTCAACGCGTTTACTGTGTT...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS TCA 90 bp | ATCATGGTTAGAAATTTAGGGCTTGTCCATTCTAACATGAGCAAGTaGCTATTTACTAATATGGGTTCCACAGACAATCCTGCCAGGAAT | + |
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Preference number: 5 (lower is better) Translates to: IMVRNLGLVHSNMSK*LFTNMGSTDNPARN Trigger: ATTCCTGGCAGGATTGTCTGTGGAACCCATATTAGTAAATAGTCACTTGCTCATGTTAGAATGGACAAGCCCTAAATTTCTAACCATGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075619.5 |
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| CDS-3UTR CAA 90 bp | GGGAAAAAGGATTACTTCCTTTTATTTCCTCAGGTATTATATCACAGAAGTGGAGGTACCACAATGGCATaGAGGAGTAAAAGAAAAACT | + |
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Preference number: 5 (lower is better) Translates to: GKKDYFLLFPQVLYHRSGGTTMA*RSKRKT Trigger: AGTTTTTCTTTTACTCCTCAATGCCATTGTGGTACC...TCCACTTCTGTGATATAATACCTGAGGAAATAAAAGGAAGTAATCCTTTTTCCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS TCA 72 bp | TATGGGTTCCACAGACAATCCTGCCAGGAATCGAAGTaGGCAGTAGATGAAGAAGGAGGGGGCAAAAGCTAC | + |
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Preference number: 6 (lower is better) Translates to: YGFHRQSCQESK*AVDEEGGGKSY Trigger: GTAGCTTTTGCCCCCTCCTTCTTCATCTACTGCTCACTTCGATTCCTGGCAGGATTGTCTGTGGAACCCATA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075619.5 |
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| CDS TCA 72 bp | GGGATAGGAATGATCCACTATTACCAAAGAACCCAATaGCTCCTACAGCTGTTGCCCTTAGTGTGGTTGGGA | + |
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Preference number: 6 (lower is better) Translates to: GIGMIHYYQRTQ*LLQLLPLVWLG Trigger: TCCCAACCACACTAAGGGCAACAGCTGTAGGAGTCATTGGGTTCTTTGGTAATAGTGGATCATTCCTATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS TCA 72 bp | AAGAAGAATATTGGCACAGACATTGTCAGCTGGAGGTaGTGCCAGATTCTAAATAGAAAAGCCAGGCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: KKNIGTDIVSWR*CQILNRKARPA Trigger: AGCAGGCCTGGCTTTTCTATTTAGAATCTGGCATCACCTCCAGCTGACAATGTCTGTGCCAATATTCTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075619.5 |
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| CDS TCA 72 bp | GTTGCCCTTAGTGTGGTTGGGAGTAGCTCATTTGTATaGAGACGACTAACACCCACACACAGAGAAGAAATT | + |
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Preference number: 6 (lower is better) Translates to: VALSVVGSSSFV*RRLTPTHREEI Trigger: AATTTCTTCTCTGTGTGTGGGTGTTAGTCGTCTTCATACAAATGAGCTACTCCCAACCACACTAAGGGCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS TCA 72 bp | TTGGGAATGGCTGCAGTAAAGTTCTCCATTGCAATATaGGGTACCACAATGGCATTGAGGAGTAAAAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: LGMAAVKFSIAI*GTTMALRSKRK Trigger: TTTTCTTTTACTCCTCAATGCCATTGTGGTACCTCATATTGCAATGGAGAACTTTACTGCAGCCATTCCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS TCA 72 bp | AATGTGGCCATAATAATACGCAGGGTCTGCATTTCTTaGGGTACAAATACAGCAATCAGAATGAAGATTCCC | + |
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Preference number: 6 (lower is better) Translates to: NVAIIIRRVCIS*GTNTAIRMKIP Trigger: GGGAATCTTCATTCTGATTGCTGTATTTGTACCTCAAGAAATGCAGACCCTGCGTATTATTATGGCCACATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075619.5 ENSMUST00000182102.8 |
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| CDS TCA 72 bp | AGAAATTTAGGGCTTGTCCATTCTAACATGAGCAAGTaGCTATTTACTAATATGGGTTCCACAGACAATCCT | + |
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Preference number: 6 (lower is better) Translates to: RNLGLVHSNMSK*LFTNMGSTDNP Trigger: AGGATTGTCTGTGGAACCCATATTAGTAAATAGTCACTTGCTCATGTTAGAATGGACAAGCCCTAAATTTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075619.5 |
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