Pregenerated sensors for SLC22A26 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000053303Ensembl transcript IDs: ENSMUST00000065634.8, ENSMUST00000120522.8
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCCATCAGCAGGAAGCCATCCTGGGAGGAAATTCATGTGGTCTTTaGCTTTTCAGAGCACACCCATCACATCTAGGCAAAATGATGGGA | + |
|
Preference number: 1 (lower is better) Translates to: AHQQEAILGGNSCGL*LFRAHPSHLGKMMG Trigger: TCCCATCATTTTGCCTAGATGTGATGGGTGTGCTCTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATGGCTTCCTGCTGATGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR CCA 90 bp | CCATCACATCTAGGCAAAATGATGGGACATCTCCAGGAAGTTCACTaGCTTGCCACAGACTTTCATTCATTGTTCAGCCACCACATCTTG | + |
|
Preference number: 1 (lower is better) Translates to: PSHLGKMMGHLQEVH*LATDFHSLFSHHIL Trigger: CAAGATGTGGTGGCTGAACAATGAATGAAAGTCTGTGGCAAGCCAGTGAACTTCCTGGAGATGTCCCATCATTTTGCCTAGATGTGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR CCA 90 bp | GATGAGAAATATATCATAGAAAGGCCCATCAGCAGGAAGCCATCCTaGGAGGAAATTCATGTGGTCTTTGCCTTTTCAGAGCACACCCAT | + |
|
Preference number: 1 (lower is better) Translates to: DEKYIIERPISRKPS*EEIHVVFAFSEHTH Trigger: ATGGGTGTGCTCTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATGGCTTCCTGCTGATGGGCCTTTCTATGATATATTTCTCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR GCA 90 bp | GTGAGTGCCCAAGAAACTATAGGCAGAGAGGTTTTCTCTATGCCATaGCTGATAGATGAGAAATATATCATAGAAAGGCCCATCAGCAGG | + |
|
Preference number: 1 (lower is better) Translates to: VSAQETIGREVFSMP*LIDEKYIIERPISR Trigger: CCTGCTGATGGGCCTTTCTATGATATATTTCTCATCTATCAGGCATGGCATAGAGAAAACCTCTCTGCCTATAGTTTCTTGGGCACTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR TCA 90 bp | AGAAACTATAGGCAGAGAGGTTTTCTCTATGCCATGCCTGATAGATaGGAAATATATCATAGAAAGGCCCATCAGCAGGAAGCCATCCTG | + |
|
Preference number: 1 (lower is better) Translates to: RNYRQRGFLYAMPDR*EIYHRKAHQQEAIL Trigger: CAGGATGGCTTCCTGCTGATGGGCCTTTCTATGATATATTTCTCATCTATCAGGCATGGCATAGAGAAAACCTCTCTGCCTATAGTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR TCA 90 bp | AAGCCTATTCTTCTTCCTAGTACAATTCATGTGCTTCTGATACATTaGGGTTTGCAGAACTCTTTTGCAGCTTTCTTATTTTGCAGGGGG | + |
|
Preference number: 1 (lower is better) Translates to: KPILLPSTIHVLLIH*GLQNSFAAFLFCRG Trigger: CCCCCTGCAAAATAAGAAAGCTGCAAAAGAGTTCTGCAAACCTCAATGTATCAGAAGCACATGAATTGTACTAGGAAGAAGAATAGGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR TCA 90 bp | TTCTTTGAATTTGTCTGTCTTCTGTACCCTTGGCTGGACCAGGTATaGTTGCCAGTAACTTTTTCTCACTCTATTTATTTCATGGGAAAT | + |
|
Preference number: 1 (lower is better) Translates to: FFEFVCLLYPWLDQV*LPVTFSHSIYFMGN Trigger: ATTTCCCATGAAATAAATAGAGTGAGAAAAAGTTACTGGCAATCATACCTGGTCCAGCCAAGGGTACAGAAGACAGACAAATTCAAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATCAGCAGGAAGCCATCCTGGGAGGAAATTCATGTGGTCTTTGCCTTTTCAGTTCTGTACCCTTGGCTaGACCAGGTATGATTGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PSAGSHPGRKFMWSLPFQFCTLG*TRYDCQ Trigger: CTGGCAATCATACCTGGTCCAGCCAAGGGTACAGAA...CTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATGGCTTCCTGCTGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR CAA 90 bp | CTCCCTTTTCTGACAAACACAATGCCCCAACTTCCTTCTTTGAATTaGTCTGTCTTCTGTACCCTTGGCTGGACCAGGTATGATTGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LPFLTNTMPQLPSLN*SVFCTLGWTRYDCQ Trigger: CTGGCAATCATACCTGGTCCAGCCAAGGGTACAGAAGACAGACAAATTCAAAGAAGGAAGTTGGGGCATTGTGTTTGTCAGAAAAGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR-3UTR GCA 90 bp | CCATCAGCAGGAAGCCATCCTGGGAGGAAATTCATGTGGTCTTTGCCTTTTCAGGGAAGTTCACTGGCTTaGCACAGACTTTCATTCATT | + |
|
Preference number: 2 (lower is better) Translates to: PSAGSHPGRKFMWSLPFQGSSLA*HRLSFI Trigger: AATGAATGAAAGTCTGTGGCAAGCCAGTGAACTTCC...CTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATGGCTTCCTGCTGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAAGTTCACTGGCTTGCCACAGACTTTCATTCATTGTTCAGCCACCACATCTTTGGCTGGACCAGGTATaGTTGCCAGTAACTTTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GSSLACHRLSFIVQPPHLWLDQV*LPVTFS Trigger: AGAAAAAGTTACTGGCAATCATACCTGGTCCAGCCA...AAGATGTGGTGGCTGAACAATGAATGAAAGTCTGTGGCAAGCCAGTGAACTTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAGATGAGAAATATATCATAGAAAGGCCCATCAGCAGGAAGCCATCCTGGGAGGCCACCACATCTTGTTaGAAGTGGGACAAGCATAGA | + |
|
Preference number: 2 (lower is better) Translates to: IDEKYIIERPISRKPSWEATTSC*KWDKHR Trigger: TCTATGCTTGTCCCACTTCCAACAAGATGTGGTGGC...CTCCCAGGATGGCTTCCTGCTGATGGGCCTTTCTATGATATATTTCTCATCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGAGGAAATTCATGTGGTCTTTGCCTTTTCAGAGCACACCCATCACATCTAATCTTGATGTTTGACTaGAGGCCAATTCCTGGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: LGGNSCGLCLFRAHPSHLILMFD*RPIPGV Trigger: AACTCCAGGAATTGGCCTCCAGTCAAACATCAAGAT...TAGATGTGATGGGTGTGCTCTGAAAAGGCAAAGACCACATGAATTTCCTCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAGATGAGAAATATATCATAGAAAGGCCCATCAGCAGGAAGCCATCCTGGGAGCTCCACCCACATATATaGATGCTTGCACATATTACT | + |
|
Preference number: 2 (lower is better) Translates to: IDEKYIIERPISRKPSWELHPHI*MLAHIT Trigger: AGTAATATGTGCAAGCATGCATATATGTGGGTGGAG...CTCCCAGGATGGCTTCCTGCTGATGGGCCTTTCTATGATATATTTCTCATCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAGTTCACTGGCTTGCCACAGACTTTCATTCATTGTTCAGCCACCACATCTACTCTATTTATTTCATaGGAAATGCAGTGGATTGGA | + |
|
Preference number: 2 (lower is better) Translates to: RKFTGLPQTFIHCSATTSTLFIS*EMQWIG Trigger: TCCAATCCACTGCATTTCCCATGAAATAAATAGAGT...AGATGTGGTGGCTGAACAATGAATGAAAGTCTGTGGCAAGCCAGTGAACTTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR-3UTR CCA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATCTTGATGTTTGACTaGAGGCCAATTCCTGGAGTT | + |
|
Preference number: 2 (lower is better) Translates to: FLTLFISWEMQWIGVETNILMFD*RPIPGV Trigger: AACTCCAGGAATTGGCCTCCAGTCAAACATCAAGAT...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| 3UTR-3UTR CCA 90 bp | CACATATTACTAAAAAGCTCATCACCCTACACTCCCTTTTCTGACAAACACAATTCATGGGAAATGCAGTaGATTGGAGTTGAGACAAAT | + |
|
Preference number: 2 (lower is better) Translates to: HILLKSSSPYTPFSDKHNSWEMQ*IGVETN Trigger: ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGA...ATTGTGTTTGTCAGAAAAGGGAGTGTAGGGTGATGAGCTTTTTAGTAATATGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR CAA 90 bp | GCTACTTTCCCCATTTGTGACATCATTTATTTTCTCGACCTACCTTaGAGTGAATCTATTCCAAGACTAGAAATTTGTTCCAAGCCTATT | + |
|
Preference number: 2 (lower is better) Translates to: ATFPICDIIYFLDLP*SESIPRLEICSKPI Trigger: AATAGGCTTGGAACAAATTTCTAGTCTTGGAATAGATTCACTCAAAGGTAGGTCGAGAAAATAAATGATGTCACAAATGGGGAAAGTAGC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR-3UTR CAA 90 bp | CCATCAGCAGGAAGCCATCCTGGGAGGAAATTCATGTGGTCTTTGCCTTTTCAGTTCAGCCACCACATCTaGTTGGAAGTGGGACAAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PSAGSHPGRKFMWSLPFQFSHHI*LEVGQA Trigger: TGCTTGTCCCACTTCCAACAAGATGTGGTGGCTGAA...CTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATGGCTTCCTGCTGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR CCA 72 bp | CCATCAGCAGGAAGCCATCCTGGGAGGAAATTCATGTaGTCTTTGCCTTTTCAGAGCACACCCATCACATCT | + |
|
Preference number: 3 (lower is better) Translates to: PSAGSHPGRKFM*SLPFQSTPITS Trigger: AGATGTGATGGGTGTGCTCTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATGGCTTCCTGCTGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR GCA 72 bp | CAGGAAGCCATCCTGGGAGGAAATTCATGTGGTCTTTaGCTTTTCAGAGCACACCCATCACATCTAGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: QEAILGGNSCGL*LFRAHPSHLGK Trigger: TTTGCCTAGATGTGATGGGTGTGCTCTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATGGCTTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR CCA 72 bp | TTCATTCATTGTTCAGCCACCACATCTTGTTGGAAGTaGGACAAGCATAGACTTAGGGGAAGGTTGCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: FIHCSATTSCWK*DKHRLRGRLQA Trigger: TGCCTGCAACCTTCCCCTAAGTCTATGCTTGTCCCACTTCCAACAAGATGTGGTGGCTGAACAATGAATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR CCA 72 bp | CTAGGCAAAATGATGGGACATCTCCAGGAAGTTCACTaGCTTGCCACAGACTTTCATTCATTGTTCAGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: LGKMMGHLQEVH*LATDFHSLFSH Trigger: GTGGCTGAACAATGAATGAAAGTCTGTGGCAAGCCAGTGAACTTCCTGGAGATGTCCCATCATTTTGCCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCCTGGGAGGAAATTCATGTGGTCTTTGCCTTTTCAGAGCACACCCATCACACCCCAACTTCCTTCTTaGAATTTGTCTGTCTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HPGRKFMWSLPFQSTPITPQLPS*NLSVFC Trigger: ACAGAAGACAGACAAATTCAAAGAAGGAAGTTGGGG...TGTGATGGGTGTGCTCTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR GCA 72 bp | CAAAATGATGGGACATCTCCAGGAAGTTCACTGGCTTaGCACAGACTTTCATTCATTGTTCAGCCACCACAT | + |
|
Preference number: 3 (lower is better) Translates to: QNDGTSPGSSLA*HRLSFIVQPPH Trigger: ATGTGGTGGCTGAACAATGAATGAAAGTCTGTGGCAAGCCAGTGAACTTCCTGGAGATGTCCCATCATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR CCA 72 bp | CAGACTTTCATTCATTGTTCAGCCACCACATCTTGTTaGAAGTGGGACAAGCATAGACTTAGGGGAAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: QTFIHCSATTSC*KWDKHRLRGRL Trigger: CAACCTTCCCCTAAGTCTATGCTTGTCCCACTTCCAACAAGATGTGGTGGCTGAACAATGAATGAAAGTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR CCA 72 bp | TATATCATAGAAAGGCCCATCAGCAGGAAGCCATCCTaGGAGGAAATTCATGTGGTCTTTGCCTTTTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: YIIERPISRKPS*EEIHVVFAFSE Trigger: CTCTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATGGCTTCCTGCTGATGGGCCTTTCTATGATATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCTTCTGTACCCTTGGCTGGACCAGGTATGATTGCCAGTAACTTTTTCTCATGCAGTGGATTGGAGTaGAGACAAATATTCCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LSSVPLAGPGMIASNFFSCSGLE*RQIFLE Trigger: TTCTAGGAATATTTGTCTCAACTCCAATCCACTGCA...TGAGAAAAAGTTACTGGCAATCATACCTGGTCCAGCCAAGGGTACAGAAGACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR TCA 72 bp | AGGCAGAGAGGTTTTCTCTATGCCATGCCTGATAGATaGGAAATATATCATAGAAAGGCCCATCAGCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RQRGFLYAMPDR*EIYHRKAHQQE Trigger: TTCCTGCTGATGGGCCTTTCTATGATATATTTCTCATCTATCAGGCATGGCATAGAGAAAACCTCTCTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGACAAACACAATGCCCCAACTTCCTTCTTTGAATTTGTCTGTCTTCTGTACCGGGAAATGCAGTGGATaGGAGTTGAGACAAATATTC | + |
|
Preference number: 3 (lower is better) Translates to: LTNTMPQLPSLNLSVFCTGKCSG*ELRQIF Trigger: GAATATTTGTCTCAACTCCAATCCACTGCATTTCCC...GGTACAGAAGACAGACAAATTCAAAGAAGGAAGTTGGGGCATTGTGTTTGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTGATAGATGAGAAATATATCATAGAAAGGCCCATCAGCAGGAAGCCATCCCATTTTTCTTTTATCTaGATGTTTGACTGGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CLIDEKYIIERPISRKPSHFSFI*MFDWRP Trigger: TGGCCTCCAGTCAAACATCAAGATAAAAGAAAAATG...GGATGGCTTCCTGCTGATGGGCCTTTCTATGATATATTTCTCATCTATCAGGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR-3UTR CAA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATCATTTTTCTTTTATCTaGATGTTTGACTGGAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: FLTLFISWEMQWIGVETNHFSFI*MFDWRP Trigger: TGGCCTCCAGTCAAACATCAAGATAAAAGAAAAATG...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| 3UTR TCA 72 bp | CTTCTTCCTAGTACAATTCATGTGCTTCTGATACATTaGGGTTTGCAGAACTCTTTTGCAGCTTTCTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: LLPSTIHVLLIH*GLQNSFAAFLF Trigger: AAATAAGAAAGCTGCAAAAGAGTTCTGCAAACCTCAATGTATCAGAAGCACATGAATTGTACTAGGAAGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | CATCCTGGGAGGAAATTCATGTGGTCTTTGCCTTTTCAGAGCACACCCATCACAAGAGGACTCCATAGATaGTCCAGGGCAAGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HPGRKFMWSLPFQSTPITRGLHR*SRARRQ Trigger: CTGCCTCCTTGCCCTGGATCATCTATGGAGTCCTCT...TGTGATGGGTGTGCTCTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | CATCCTGGGAGGAAATTCATGTGGTCTTTGCCTTTTCAGAGCACACCCATCACAAATCAGCCACCGAGCTaGTTCTGTCAGCCACCTACT | + |
|
Preference number: 4 (lower is better) Translates to: HPGRKFMWSLPFQSTPITNQPPS*FCQPPT Trigger: AGTAGGTGGCTGACAGAATCAGCTCGGTGGCTGATT...TGTGATGGGTGTGCTCTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | CCATCAGCAGGAAGCCATCCTGGGAGGAAATTCATGTGGTCTTTGCCTTTTCAGGAGAGAAAAGTCCTCTaGTCATACACCCAGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PSAGSHPGRKFMWSLPFQERKVL*SYTQPS Trigger: GGATGGCTGGGTGTATGACCAGAGGACTTTTCTCTC...CTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATGGCTTCCTGCTGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | CCATCAGCAGGAAGCCATCCTGGGAGGAAATTCATGTGGTCTTTGCCTTTTCAGCCTTCTGGGGTTTGTTaGTTACAATCAGCCACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: PSAGSHPGRKFMWSLPFQPSGVC*LQSATE Trigger: CTCGGTGGCTGATTGTAACCAACAAACCCCAGAAGG...CTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATGGCTTCCTGCTGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTCTGTACCCTTGGCTGGACCAGGTATGATTGCCAGTAACTTTTTCTCAGGCGCTTTCGCAAGTTaGGCATGTGGAACAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSSVPLAGPGMIASNFFSGAFAS*ACGTSH Trigger: GTGACTTGTTCCACATGCCCAACTTGCGAAAGCGCC...TGAGAAAAAGTTACTGGCAATCATACCTGGTCCAGCCAAGGGTACAGAAGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGTTCACTGGCTTGCCACAGACTTTCATTCATTGTTCAGCCACCACATCTTACTGAATTCAGCTCCTaGGATCCACACACCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSSLACHRLSFIVQPPHLTEFSS*DPHTRF Trigger: GAACCTGGTGTGTGGATCTCAGGAGCTGAATTCAGT...AAGATGTGGTGGCTGAACAATGAATGAAAGTCTGTGGCAAGCCAGTGAACTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | CATCCTGGGAGGAAATTCATGTGGTCTTTGCCTTTTCAGAGCACACCCATCACAAGGTGGTGCCAGTTTTaGAATGCAAATGCCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: HPGRKFMWSLPFQSTPITRWCQF*NANARP Trigger: AGGTCTGGCATTTGCATTTCAAAACTGGCACCACCT...TGTGATGGGTGTGCTCTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR GCA 90 bp | CCATCAGCAGGAAGCCATCCTGGGAGGAAATTCATGTGGTCTTTGCCTTTTCAGAGCAGAACTTCCTCCTaGCAGTGTTATCAAAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PSAGSHPGRKFMWSLPFQSRTSS*QCYQNH Trigger: GTGGTTTTGATAACACTGGCAGGAGGAAGTTCTGCT...CTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATGGCTTCCTGCTGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGTTCACTGGCTTGCCACAGACTTTCATTCATTGTTCAGCCACCACATCTTAGCAGTGGCTGGGATTaGGAATGCAGAAGTAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GSSLACHRLSFIVQPPHLSSGWD*ECRSKT Trigger: AGTCTTACTTCTGCATTCTCAATCCCAGCCACTGCT...AAGATGTGGTGGCTGAACAATGAATGAAAGTCTGTGGCAAGCCAGTGAACTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | CCATCAGCAGGAAGCCATCCTGGGAGGAAATTCATGTGGTCTTTGCCTTTTCAGGCAGAAGTAAGACTTTaGGTTAGGAAGACATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PSAGSHPGRKFMWSLPFQAEVRL*VRKTLP Trigger: AGGCAATGTCTTCCTAACCCAAAGTCTTACTTCTGC...CTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATGGCTTCCTGCTGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| 3UTR CAA 72 bp | CAGGAAGTTCACTGGCTTGCCACAGACTTTCATTCATaGTTCAGCCACCACATCTTGTTGGAAGTGGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: QEVHWLATDFHS*FSHHILLEVGQ Trigger: TTGTCCCACTTCCAACAAGATGTGGTGGCTGAACAATGAATGAAAGTCTGTGGCAAGCCAGTGAACTTCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | CTGTCTTCTGTACCCTTGGCTGGACCAGGTATGATTGCCAGTAACTTTTTCTCAAACTCATTGACAGTGTaGTCACCAAGGCTTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LSSVPLAGPGMIASNFFSNSLTV*SPRLGF Trigger: AAACCCAAGCCTTGGTGACCACACTGTCAATGAGTT...TGAGAAAAAGTTACTGGCAATCATACCTGGTCCAGCCAAGGGTACAGAAGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | CTGTCTTCTGTACCCTTGGCTGGACCAGGTATGATTGCCAGTAACTTTTTCTCAGCAACAAAGCACATCTaGAAAGTAACTTCCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSSVPLAGPGMIASNFFSATKHI*KVTSSQ Trigger: TTGGGAGGAAGTTACTTTTCAGATGTGCTTTGTTGC...TGAGAAAAAGTTACTGGCAATCATACCTGGTCCAGCCAAGGGTACAGAAGACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTGATAGATGAGAAATATATCATAGAAAGGCCCATCAGCAGGAAGCCATCCGGGTTAGGAAGACATTaGCTTTCAAGTGTTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLIDEKYIIERPISRKPSGLGRH*LSSVGG Trigger: ACCTCCAACACTTGAAAGGCAATGTCTTCCTAACCC...GGATGGCTTCCTGCTGATGGGCCTTTCTATGATATATTTCTCATCTATCAGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATAAGGGGAGACAGGGCTaGCCCCACACCACCACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLTLFISWEMQWIGVETNKGRQG*PHTTTN Trigger: ATTTGTGGTGGTGTGGGGGCAGCCCTGTCTCCCCTT...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR GCA 90 bp | ATGATTGCCAGTAACTTTTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGAAAGGGGAGACAGGGCTaGCCCCACACCACCACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: MIASNFFSLYLFHGKCSGKGRQG*PHTTTN Trigger: ATTTGTGGTGGTGTGGGGGCAGCCCTGTCTCCCCTT...TCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAAAAGTTACTGGCAATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATAGAGGACTCCATAGATaGTCCAGGGCAAGGAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLTLFISWEMQWIGVETNRGLHR*SRARRQ Trigger: CTGCCTCCTTGCCCTGGATCATCTATGGAGTCCTCT...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | CTGACAAACACAATGCCCCAACTTCCTTCTTTGAATTTGTCTGTCTTCTGTACCTCCTGTAAGGCCTTCTaGGGTTTGTTGGTTACAATC | + |
|
Preference number: 4 (lower is better) Translates to: LTNTMPQLPSLNLSVFCTSCKAF*GLLVTI Trigger: GATTGTAACCAACAAACCCCAGAAGGCCTTACAGGA...GGTACAGAAGACAGACAAATTCAAAGAAGGAAGTTGGGGCATTGTGTTTGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | TTGCCAGTAACTTTTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGACCCTCCAAGAGCAGTaGCTGGGATTGAGAATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPVTFSHSIYFMGNAVDWTLQEQ*LGLRMQ Trigger: CTGCATTCTCAATCCCAGCCACTGCTCTTGGAGGGT...CCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAAAAGTTACTGGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGGAAATTCATGTGGTCTTTGCCTTTTCAGAGCACACCCATCACATCTATTTTCCAATATTACATaGGGCATCGTGATGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: LGGNSCGLCLFRAHPSHLFSNIT*GIVMTL Trigger: CAATGTCATCACGATGCCTCATGTAATATTGGAAAA...TAGATGTGATGGGTGTGCTCTGAAAAGGCAAAGACCACATGAATTTCCTCCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | TCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCCAGGTTGGAATCCAGTaGGATGGAGATCCTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLYLFHGKCSGLELRQIFQVGIQ*DGDPQE Trigger: CTCCTGAGGATCTCCATCCCACTGGATTCCAACCTG...GAATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | TCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCGGCGCTTTCGCAAGTTaGGCATGTGGAACAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLYLFHGKCSGLELRQIFGAFAS*ACGTSH Trigger: GTGACTTGTTCCACATGCCCAACTTGCGAAAGCGCC...GAATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | TCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCACCCTCCAAGAGCAGTaGCTGGGATTGAGAATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLYLFHGKCSGLELRQIFTLQEQ*LGLRMQ Trigger: CTGCATTCTCAATCCCAGCCACTGCTCTTGGAGGGT...GAATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | CTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTACTGAATTCAGCTCCTaGGATCCACACACCAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLFISWEMQWIGVETNITEFSS*DPHTRF Trigger: GAACCTGGTGTGTGGATCTCAGGAGCTGAATTCAGT...AATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCTATGCCATGCCTGATAGATGAGAAATATATCATAGAAAGGCCCATCAGCGTTTTGAAATGCAAATaGCAGACCTGCCAGGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSMPCLIDEKYIIERPISVLKCK*QTCQDK Trigger: CTTATCCTGGCAGGTCTGGCATTTGCATTTCAAAAC...GCTGATGGGCCTTTCTATGATATATTTCTCATCTATCAGGCATGGCATAGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | TCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCCTCAGGAGGTCATCTTaGCTCAGGATCCCACTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: SLYLFHGKCSGLELRQIFLRRSS*LRIPLL Trigger: TAACAGTGGGATCCTGAGCCAAGATGACCTCCTGAG...GAATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | CTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCTCAGGAGGTCATCTTaGCTCAGGATCCCACTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LTLFISWEMQWIGVETNILRRSS*LRIPLL Trigger: TAACAGTGGGATCCTGAGCCAAGATGACCTCCTGAG...AATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | TCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCGAGAGAAAAGTCCTCTaGTCATACACCCAGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: SLYLFHGKCSGLELRQIFERKVL*SYTQPS Trigger: GGATGGCTGGGTGTATGACCAGAGGACTTTTCTCTC...GAATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATCCTTCTGGGGTTTGTTaGTTACAATCAGCCACCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLTLFISWEMQWIGVETNPSGVC*LQSATE Trigger: CTCGGTGGCTGATTGTAACCAACAAACCCCAGAAGG...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTGATAGATGAGAAATATATCATAGAAAGGCCCATCAGCAGGAAGCCATCCAGAAGGTTTTGTTCGTaGTATTGCAATCTCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CLIDEKYIIERPISRKPSRRFCS*YCNLIL Trigger: AAGGATGAGATTGCAATACCACGAACAAAACCTTCT...GGATGGCTTCCTGCTGATGGGCCTTTCTATGATATATTTCTCATCTATCAGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATAGGTGGTGCCAGTTTTaGAATGCAAATGCCAGACCT | + |
|
Preference number: 4 (lower is better) Translates to: FLTLFISWEMQWIGVETNRWCQF*NANARP Trigger: AGGTCTGGCATTTGCATTTCAAAACTGGCACCACCT...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATAGCAGTGGCTGGGATTaGGAATGCAGAAGTAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: FLTLFISWEMQWIGVETNSSGWD*ECRSKT Trigger: AGTCTTACTTCTGCATTCTCAATCCCAGCCACTGCT...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | CTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCACCACAAATTCCAATaGCTCCTAATGCTGTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LTLFISWEMQWIGVETNIHHKFQ*LLMLLP Trigger: GGGCAACAGCATTAGGAGTCATTGGAATTTGTGGTG...AATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR GCA 90 bp | TCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCGTGCCAGTTTTGAAATaGAAATGCCAGACCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLYLFHGKCSGLELRQIFVPVLK*KCQTCQ Trigger: CTGGCAGGTCTGGCATTTGCATTTCAAAACTGGCAC...GAATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTATGCCATGCCTGATAGATGAGAAATATATCATAGAAAGGCCCATCAGCACAGGGCTCTGTATCTaGTTCTGTCATATTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSMPCLIDEKYIIERPISTGLCI*FCHIGK Trigger: TTTTCCAATATGACAGAACCAGATACAGAGCCCTGT...GCTGATGGGCCTTTCTATGATATATTTCTCATCTATCAGGCATGGCATAGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCTATGCCATGCCTGATAGATGAGAAATATATCATAGAAAGGCCCATCAGCAAGCAAGACAAATATTaGCACAGATATTGCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSMPCLIDEKYIIERPISKQDKY*HRYCQL Trigger: CAGCTGGCAATATCTGTGCCAATATTTGTCTTGCTT...GCTGATGGGCCTTTCTATGATATATTTCTCATCTATCAGGCATGGCATAGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR GCA 90 bp | CACATATTACTAAAAAGCTCATCACCCTACACTCCCTTTTCTGACAAACACAATCCAGTGATGGCCATTTaGAACAAAGCACATCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HILLKSSSPYTPFSDKHNPVMAI*NKAHLK Trigger: TTTCAGATGTGCTTTGTTGCAAATGGCCATCACTGG...ATTGTGTTTGTCAGAAAAGGGAGTGTAGGGTGATGAGCTTTTTAGTAATATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATGGGTTAGGAAGACATTaGCTTTCAAGTGTTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLTLFISWEMQWIGVETNGLGRH*LSSVGG Trigger: ACCTCCAACACTTGAAAGGCAATGTCTTCCTAACCC...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR GCA 90 bp | TCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCAGCAGAACTTCCTCCTaGCAGTGTTATCAAAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLYLFHGKCSGLELRQIFSRTSS*QCYQNH Trigger: GTGGTTTTGATAACACTGGCAGGAGGAAGTTCTGCT...GAATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATAACTCATTGACAGTGTaGTCACCAAGGCTTGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLTLFISWEMQWIGVETNNSLTV*SPRLGF Trigger: AAACCCAAGCCTTGGTGACCACACTGTCAATGAGTT...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | CTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTTCCTGTAAGGCCTTCTaGGGTTTGTTGGTTACAATC | + |
|
Preference number: 4 (lower is better) Translates to: LTLFISWEMQWIGVETNISCKAF*GLLVTI Trigger: GATTGTAACCAACAAACCCCAGAAGGCCTTACAGGA...AATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATGCAACAAAGCACATCTaGAAAGTAACTTCCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FLTLFISWEMQWIGVETNATKHI*KVTSSQ Trigger: TTGGGAGGAAGTTACTTTTCAGATGTGCTTTGTTGC...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATTTGTGTTTATGGGTATaGTACAAAGCCCTGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FLTLFISWEMQWIGVETNLCLWV*YKALSG Trigger: TCCTGACAGGGCTTTGTATCATACCCATAAACACAA...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | ATGATTGCCAGTAACTTTTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGTGTTTATGGGTATaGTACAAAGCCCTGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: MIASNFFSLYLFHGKCSGLCLWV*YKALSG Trigger: TCCTGACAGGGCTTTGTATCATACCCATAAACACAA...TCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAAAAGTTACTGGCAATCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | TCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCCAATCTCATCCTTCATaGTGGTTCTTACAACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLYLFHGKCSGLELRQIFQSHPS*WFLQPP Trigger: TGGAGGTTGTAAGAACCATCATGAAGGATGAGATTG...GAATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATCAATCTCATCCTTCATaGTGGTTCTTACAACCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLTLFISWEMQWIGVETNQSHPS*WFLQPP Trigger: TGGAGGTTGTAAGAACCATCATGAAGGATGAGATTG...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR GCA 90 bp | CTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCCAGTGATGGCCATTTaGAACAAAGCACATCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LTLFISWEMQWIGVETNIPVMAI*NKAHLK Trigger: TTTCAGATGTGCTTTGTTGCAAATGGCCATCACTGG...AATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR GCA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATGTTTTGAAATGCAAATaGCAGACCTGCCAGGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLTLFISWEMQWIGVETNVLKCK*QTCQDK Trigger: CTTATCCTGGCAGGTCTGGCATTTGCATTTCAAAAC...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATGCAGAAGTAAGACTTTaGGTTAGGAAGACATTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FLTLFISWEMQWIGVETNAEVRL*VRKTLP Trigger: AGGCAATGTCTTCCTAACCCAAAGTCTTACTTCTGC...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | TCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCTATAAATTTAGCCACTaGATTCAGCTCCTGAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SLYLFHGKCSGLELRQIFYKFSH*IQLLRS Trigger: GGATCTCAGGAGCTGAATTCAGTGGCTAAATTTATA...GAATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | TCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCACAGGGCTCTGTATCTaGTTCTGTCATATTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLYLFHGKCSGLELRQIFTGLCI*FCHIGK Trigger: TTTTCCAATATGACAGAACCAGATACAGAGCCCTGT...GAATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | TCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCAAGCAAGACAAATATTaGCACAGATATTGCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLYLFHGKCSGLELRQIFKQDKY*HRYCQL Trigger: CAGCTGGCAATATCTGTGCCAATATTTGTCTTGCTT...GAATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR TCA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATTTTTCCAATATTACATaGGGCATCGTGATGACATTG | + |
|
Preference number: 4 (lower is better) Translates to: FLTLFISWEMQWIGVETNFSNIT*GIVMTL Trigger: CAATGTCATCACGATGCCTCATGTAATATTGGAAAA...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CCA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATAGAAGGTTTTGTTCGTaGTATTGCAATCTCATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: FLTLFISWEMQWIGVETNRRFCS*YCNLIL Trigger: AAGGATGAGATTGCAATACCACGAACAAAACCTTCT...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS TCA 90 bp | TGCCAGACCTGCCAGGATAAGGCCTCCAAAATGATGAGAACTCATTaGCAGTGTGGTCACCAAGGCTTGGGTTTTAGGGCTTGTCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: CQTCQDKASKMMRTH*QCGHQGLGFRACPF Trigger: GAATGGACAAGCCCTAAAACCCAAGCCTTGGTGACCACACTGTCAATGAGTTCTCATCATTTTGGAGGCCTTATCCTGGCAGGTCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065634.8 |
||
| CDS TCA 90 bp | TGCCAGACCTGCCAGGATAAGGCCTCCAAAATGATGAGAACTCATTaGCAGTGTGGTCACCAAGGCTTGGGTTTTAGGGCTTGTCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: CQTCQDKASKMMRTH*QCGHQGLGFRACPF Trigger: AAATGGACAAGCCCTAAAACCCAAGCCTTGGTGACCACACTGTCAATGAGTTCTCATCATTTTGGAGGCCTTATCCTGGCAGGTCTGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS CCA 90 bp | CTCAAAAGGCACAGGAGACAAAGGCGCTTTCGCAAGTTGGGCATGTaGAACAAGTCACGTAGAGAAGGTTTTGTTCGTGGTATTGCAATC | + |
|
Preference number: 5 (lower is better) Translates to: LKRHRRQRRFRKLGM*NKSRREGFVRGIAI Trigger: GATTGCAATACCACGAACAAAACCTTCTCTACGTGACTTGTTCCACATGCCCAACTTGCGAAAGCGCCTTTGTCTCCTGTGCCTTTTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | CCATCAGCAGGAAGCCATCCTGGGAGGAAATTCATGTGGTCTTTGCCTTTTCAGCAAACAGGGCAAGAGTaGACTTATTCTACGGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: PSAGSHPGRKFMWSLPFQQTGQE*TYSTAN Trigger: ATTGGCCGTAGAATAAGTCAACTCTTGCCCTGTTTG...CTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATGGCTTCCTGCTGATGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS GCA 90 bp | CACAGATATTGCCAGCTGAAGGTGGTGCCAGTTTTGAAATGCAAATaGCAGACCTGCCAGGATAAGGCCTCCAAAATGATGAGAACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: HRYCQLKVVPVLKCK*QTCQDKASKMMRTH Trigger: ATGAGTTCTCATCATTTTGGAGGCCTTATCCTGGCAGGTCTGGCATTTGCATTTCAAAACTGGCACCACCTTCAGCTGGCAATATCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS GCA 90 bp | TATTGGCACAGATATTGCCAGCTGAAGGTGGTGCCAGTTTTGAAATaGAAATGCCAGACCTGCCAGGATAAGGCCTCCAAAATGATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: YWHRYCQLKVVPVLK*KCQTCQDKASKMMR Trigger: TCTCATCATTTTGGAGGCCTTATCCTGGCAGGTCTGGCATTTGCATTTCAAAACTGGCACCACCTTCAGCTGGCAATATCTGTGCCAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS CCA 90 bp | GTAGAAATCTCAAAAGGCACAGGAGACAAAGGCGCTTTCGCAAGTTaGGCATGTGGAACAAGTCACGTAGAGAAGGTTTTGTTCGTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VEISKGTGDKGAFAS*ACGTSHVEKVLFVV Trigger: TACCACGAACAAAACCTTCTCTACGTGACTTGTTCCACATGCCCAACTTGCGAAAGCGCCTTTGTCTCCTGTGCCTTTTGAGATTTCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | GGAAGTTCACTGGCTTGCCACAGACTTTCATTCATTGTTCAGCCACCACATCTTAAGGTGGTGCCAGTTTaGAAATGCAAATGCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: GSSLACHRLSFIVQPPHLKVVPV*KCKCQT Trigger: GGTCTGGCATTTGCATTTCAAAACTGGCACCACCTT...AAGATGTGGTGGCTGAACAATGAATGAAAGTCTGTGGCAAGCCAGTGAACTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS GCA 90 bp | CCACCTACTTGTGGGTATAAGCAAGACAAATATTGGCACAGATATTaGCAGCTGAAGGTGGTGCCAGTTTTGAAATGCAAATGCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: PPTCGYKQDKYWHRY*QLKVVPVLKCKCQT Trigger: GGTCTGGCATTTGCATTTCAAAACTGGCACCACCTTCAGCTGGCAATATCTGTGCCAATATTTGTCTTGCTTATACCCACAAGTAGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | CCATCAGCAGGAAGCCATCCTGGGAGGAAATTCATGTGGTCTTTGCCTTTTCAGTGGGCATCAGCTCACTaGAATATAGAACATTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: PSAGSHPGRKFMWSLPFQWASAH*NIEHYC Trigger: ACAGTAATGTTCTATATTCAAGTGAGCTGATGCCCA...CTGAAAAGGCAAAGACCACATGAATTTCCTCCCAGGATGGCTTCCTGCTGATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCAGTAACTTTTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGCCCACATTCTACATCTaGGATGGAGTCAGGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LPVTFSHSIYFMGNAVDWPTFYI*DGVRQR Trigger: CCTCTGCCTGACTCCATCCAAGATGTAGAATGTGGG...CCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAAAAGTTACTGGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCTATGCCATGCCTGATAGATGAGAAATATATCATAGAAAGGCCCATCAGCAATGATGAGAACTCATaGACAGTGTGGTCACCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSMPCLIDEKYIIERPISNDENS*TVWSPR Trigger: CCTTGGTGACCACACTGTCAATGAGTTCTCATCATT...GCTGATGGGCCTTTCTATGATATATTTCTCATCTATCAGGCATGGCATAGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | CTGACAAACACAATGCCCCAACTTCCTTCTTTGAATTTGTCTGTCTTCTGTACCCACGTAGAGAAGGTTTaGTTCGTGGTATTGCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: LTNTMPQLPSLNLSVFCTHVEKV*FVVLQS Trigger: AGATTGCAATACCACGAACAAAACCTTCTCTACGTG...GGTACAGAAGACAGACAAATTCAAAGAAGGAAGTTGGGGCATTGTGTTTGTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | CTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCCCACATTCTACATCTaGGATGGAGTCAGGCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTLFISWEMQWIGVETNIPTFYI*DGVRQR Trigger: CCTCTGCCTGACTCCATCCAAGATGTAGAATGTGGG...AATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS TCA 90 bp | CACGTAGAGAAGGTTTTGTTCGTGGTATTGCAATCTCATCCTTCATaGTGGTTCTTACAACCTCCATGGTTAGGACATCTTCAGAATTCT | + |
|
Preference number: 5 (lower is better) Translates to: HVEKVLFVVLQSHPS*WFLQPPWLGHLQNS Trigger: AGAATTCTGAAGATGTCCTAACCATGGAGGTTGTAAGAACCATCATGAAGGATGAGATTGCAATACCACGAACAAAACCTTCTCTACGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCAGTAACTTTTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGGGCATCGTGATGACATaGCAGATAAGAAGGAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPVTFSHSIYFMGNAVDWGIVMT*QIRRKA Trigger: GGCTTTCCTTCTTATCTGCAATGTCATCACGATGCC...CCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAAAAGTTACTGGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | CACATATTACTAAAAAGCTCATCACCCTACACTCCCTTTTCTGACAAACACAATCAGAGTCTGCATTTCTaGAGGCACAGACACTATGCT | + |
|
Preference number: 5 (lower is better) Translates to: HILLKSSSPYTPFSDKHNQSLHF*RHRHYA Trigger: AGCATAGTGTCTGTGCCTCAAGAAATGCAGACTCTG...ATTGTGTTTGTCAGAAAAGGGAGTGTAGGGTGATGAGCTTTTTAGTAATATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATGGCATCGTGATGACATaGCAGATAAGAAGGAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FLTLFISWEMQWIGVETNGIVMT*QIRRKA Trigger: GGCTTTCCTTCTTATCTGCAATGTCATCACGATGCC...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | CTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCCCAGTGATGGCCATTaGCAACAAAGCACATCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: LTLFISWEMQWIGVETNIPSDGH*QQSTSE Trigger: TTCAGATGTGCTTTGTTGCAAATGGCCATCACTGGG...AATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | CTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTAAGGTGGTGCCAGTTTaGAAATGCAAATGCCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: LTLFISWEMQWIGVETNIKVVPV*KCKCQT Trigger: GGTCTGGCATTTGCATTTCAAAACTGGCACCACCTT...AATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | TTGCCAGTAACTTTTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGATTGCCTTTCAAGTGTaGGAGGTTCATGTTGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: LPVTFSHSIYFMGNAVDWIAFQV*EVHVDP Trigger: GGGATCAACATGAACCTCCAACACTTGAAAGGCAAT...CCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAAAAGTTACTGGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | TCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCCAGAGTCTGCATTTCTaGAGGCACAGACACTATGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLYLFHGKCSGLELRQIFQSLHF*RHRHYA Trigger: AGCATAGTGTCTGTGCCTCAAGAAATGCAGACTCTG...GAATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | CTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTAATGATGAGAACTCATaGACAGTGTGGTCACCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTLFISWEMQWIGVETNINDENS*TVWSPR Trigger: CCTTGGTGACCACACTGTCAATGAGTTCTCATCATT...AATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTGCCTTTCAAGTGTaGGAGGTTCATGTTGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: FLTLFISWEMQWIGVETNIAFQV*EVHVDP Trigger: GGGATCAACATGAACCTCCAACACTTGAAAGGCAAT...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | TCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCCAAACAGGGCAAGAGTaGACTTATTCTACGGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLYLFHGKCSGLELRQIFQTGQE*TYSTAN Trigger: ATTGGCCGTAGAATAAGTCAACTCTTGCCCTGTTTG...GAATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATAACTTCCTCCCAAACTaGTCTGATAAATGTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: FLTLFISWEMQWIGVETNNFLPN*SDKCPP Trigger: AGGTGGACATTTATCAGACAAGTTTGGGAGGAAGTT...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | TCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATATTCAACTTCCTCCCAAACTaGTCTGATAAATGTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: SLYLFHGKCSGLELRQIFNFLPN*SDKCPP Trigger: AGGTGGACATTTATCAGACAAGTTTGGGAGGAAGTT...GAATATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATCACGTAGAGAAGGTTTaGTTCGTGGTATTGCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: FLTLFISWEMQWIGVETNHVEKV*FVVLQS Trigger: AGATTGCAATACCACGAACAAAACCTTCTCTACGTG...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS-3UTR CAA 90 bp | TTTCTCACTCTATTTATTTCATGGGAAATGCAGTGGATTGGAGTTGAGACAAATTGGGCATCAGCTCACTaGAATATAGAACATTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: FLTLFISWEMQWIGVETNWASAH*NIEHYC Trigger: ACAGTAATGTTCTATATTCAAGTGAGCTGATGCCCA...ATTTGTCTCAACTCCAATCCACTGCATTTCCCATGAAATAAATAGAGTGAGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS CAA 72 bp | TGGCACAGATATTGCCAGCTGAAGGTGGTGCCAGTTTaGAAATGCAAATGCCAGACCTGCCAGGATAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WHRYCQLKVVPV*KCKCQTCQDKA Trigger: GGCCTTATCCTGGCAGGTCTGGCATTTGCATTTCAAAACTGGCACCACCTTCAGCTGGCAATATCTGTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS GCA 72 bp | TGCCAGCTGAAGGTGGTGCCAGTTTTGAAATGCAAATaGCAGACCTGCCAGGATAAGGCCTCCAAAATGATG | + |
|
Preference number: 6 (lower is better) Translates to: CQLKVVPVLKCK*QTCQDKASKMM Trigger: CATCATTTTGGAGGCCTTATCCTGGCAGGTCTGGCATTTGCATTTCAAAACTGGCACCACCTTCAGCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS CCA 72 bp | CACAGGAGACAAAGGCGCTTTCGCAAGTTGGGCATGTaGAACAAGTCACGTAGAGAAGGTTTTGTTCGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: HRRQRRFRKLGM*NKSRREGFVRG Trigger: ACCACGAACAAAACCTTCTCTACGTGACTTGTTCCACATGCCCAACTTGCGAAAGCGCCTTTGTCTCCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS GCA 72 bp | AGATATTGCCAGCTGAAGGTGGTGCCAGTTTTGAAATaGAAATGCCAGACCTGCCAGGATAAGGCCTCCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RYCQLKVVPVLK*KCQTCQDKASK Trigger: TTTGGAGGCCTTATCCTGGCAGGTCTGGCATTTGCATTTCAAAACTGGCACCACCTTCAGCTGGCAATATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS CCA 72 bp | TCAAAAGGCACAGGAGACAAAGGCGCTTTCGCAAGTTaGGCATGTGGAACAAGTCACGTAGAGAAGGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: SKGTGDKGAFAS*ACGTSHVEKVL Trigger: CAAAACCTTCTCTACGTGACTTGTTCCACATGCCCAACTTGCGAAAGCGCCTTTGTCTCCTGTGCCTTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS CAA 72 bp | CTCAAAAGGCACAGGAGACAAAGGCGCTTTCGCAAGTaGGGCATGTGGAACAAGTCACGTAGAGAAGGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LKRHRRQRRFRK*GMWNKSRREGF Trigger: AAAACCTTCTCTACGTGACTTGTTCCACATGCCCAACTTGCGAAAGCGCCTTTGTCTCCTGTGCCTTTTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS CAA 90 bp | TGTAGAAATCTCAAAAGGCACAGGAGACAAAGGCGCTTTCGCAAGTaGGGCATGTGGAACAAGTCACGTAGAGAAGGTTTTGTTCGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: CRNLKRHRRQRRFRK*GMWNKSRREGFVRG Trigger: ACCACGAACAAAACCTTCTCTACGTGACTTGTTCCACATGCCCAACTTGCGAAAGCGCCTTTGTCTCCTGTGCCTTTTGAGATTTCTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS CCA 72 bp | TGTCAGCCACCTTGTGGGTATAAGCAAGACAAATATTaGCACAGATATTGCCAGCTGAAGGTGGTGCCAGTT | + |
|
Preference number: 6 (lower is better) Translates to: CQPPCGYKQDKY*HRYCQLKVVPV Trigger: AACTGGCACCACCTTCAGCTGGCAATATCTGTGCCAATATTTGTCTTGCTTATACCCACAAGGTGGCTGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065634.8 |
||
| CDS CCA 72 bp | GCAGTGGCTGGGATTGAGAATGCAGAAGTAAGACTTTaGGTTAGGAAGACATTGCCTTTCAAGTGTTGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: AVAGIENAEVRL*VRKTLPFKCWR Trigger: CCTCCAACACTTGAAAGGCAATGTCTTCCTAACCCAAAGTCTTACTTCTGCATTCTCAATCCCAGCCACTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS GCA 72 bp | AAGGTGGTGCCAGTTTTGAAATGCAAATGCCAGACCTaGCAGGATAAGGCCTCCAAAATGATGAGAACTCAT | + |
|
Preference number: 6 (lower is better) Translates to: KVVPVLKCKCQT*QDKASKMMRTH Trigger: ATGAGTTCTCATCATTTTGGAGGCCTTATCCTGGCAGGTCTGGCATTTGCATTTCAAAACTGGCACCACCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS TCA 72 bp | ATCGTGATGACATTGCAGATAAGAAGGAAAGCCATCTaGAGGATCTGGAATCTCCCATGGCTTCCAACTAGA | + |
|
Preference number: 6 (lower is better) Translates to: IVMTLQIRRKAI*RIWNLPWLPTR Trigger: TCTAGTTGGAAGCCATGGGAGATTCCAGATCCTTCAGATGGCTTTCCTTCTTATCTGCAATGTCATCACGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS CAA 90 bp | GCCATTTGCAACAAAGCACATCTGAAAAGTAACTTCCTCCCAAACTaGTCTGATAAATGTCCACCTACAAAATGTCCTGCCAACACGCCA | + |
|
Preference number: 6 (lower is better) Translates to: AICNKAHLKSNFLPN*SDKCPPTKCPANTP Trigger: TGGCGTGTTGGCAGGACATTTTGTAGGTGGACATTTATCAGACAAGTTTGGGAGGAAGTTACTTTTCAGATGTGCTTTGTTGCAAATGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS CAA 90 bp | ATTGACAGTGTGGTCACCAAGGCTTGGGTTTTAGGGCTTGTCCATTaGAGCAAAACACTATTTGTGTTTATGGGTATGATACAAAGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: IDSVVTKAWVLGLVH*SKTLFVFMGMIQSP Trigger: AGGGCTTTGTATCATACCCATAAACACAAATAGTGTTTTGCTCAAATGGACAAGCCCTAAAACCCAAGCCTTGGTGACCACACTGTCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS CAA 72 bp | CCATCCATACAGGGCTCTGTATCTGGTTCTGTCATATaGGAAAAGGATCCATTAAATTGTAGAAGATGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PSIQGSVSGSVI*EKDPLNCRRCH Trigger: GTGGCATCTTCTACAATTTAATGGATCCTTTTCCAATATGACAGAACCAGATACAGAGCCCTGTATGGATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS CAA 72 bp | GTGGTCACCAAGGCTTGGGTTTTAGGGCTTGTCCATTaGAGCAAAACACTATTTGTGTTTATGGGTATGATA | + |
|
Preference number: 6 (lower is better) Translates to: VVTKAWVLGLVH*SKTLFVFMGMI Trigger: TATCATACCCATAAACACAAATAGTGTTTTGCTCAAATGGACAAGCCCTAAAACCCAAGCCTTGGTGACCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000120522.8 |
||
| CDS TCA 72 bp | CCAAGGTTAGCTGCAGTGAAGTTTTCCAATATTACATaGGGCATCGTGATGACATTGCAGATAAGAAGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PRLAAVKFSNIT*GIVMTLQIRRK Trigger: TTTCCTTCTTATCTGCAATGTCATCACGATGCCTCATGTAATATTGGAAAACTTCACTGCAGCTAACCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS CAA 72 bp | AACAAAGCACATCTGAAAAGTAACTTCCTCCCAAACTaGTCTGATAAATGTCCACCTACAAAATGTCCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: NKAHLKSNFLPN*SDKCPPTKCPA Trigger: GGCAGGACATTTTGTAGGTGGACATTTATCAGACAAGTTTGGGAGGAAGTTACTTTTCAGATGTGCTTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||
| CDS CAA 72 bp | AGGAAGACATTGCCTTTCAAGTGTTGGAGGTTCATGTaGATCCCTACAGTAGGTGATATTTGTAGAAATCTC | + |
|
Preference number: 6 (lower is better) Translates to: RKTLPFKCWRFM*IPTVGDICRNL Trigger: GAGATTTCTACAAATATCACCTACTGTAGGGATCAACATGAACCTCCAACACTTGAAAGGCAATGTCTTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065634.8 ENSMUST00000120522.8 |
||