Pregenerated sensors for SLC22A23 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038267Ensembl transcript IDs: ENSMUST00000040336.12, ENSMUST00000145038.8, ENSMUST00000148390.3
Found 384 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACCTGCCAGTCCCGGCACAGCGCAGCCAGCCCCGGCATGAGGAACTaGCCCGCCATGGCCACGAAGCTCGCCACCATGGTAATTATGAAC | + |
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Preference number: 1 (lower is better) Translates to: TCQSRHSAASPGMRN*PAMATKLATMVIMN Trigger: GTTCATAATTACCATGGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCGGGGCTGGCTGCGCTGTGCCGGGACTGGCAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145038.8 |
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| 3UTR TCA 90 bp | GGCAGCCATCCAAGCTGGAGCTCTCTATGGTATGTGCTGGAGACGTaGGTGGCGGCCATGTGTGGGACATCGAGACTCCCTCCTGGGATT | + |
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Preference number: 1 (lower is better) Translates to: GSHPSWSSLWYVLET*VAAMCGTSRLPPGI Trigger: AATCCCAGGAGGGAGTCTCGATGTCCCACACATGGCCGCCACTCACGTCTCCAGCACATACCATAGAGAGCTCCAGCTTGGATGGCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR TCA 90 bp | GGGAGCTGGGCTGTGGCCATCTTTCTGGAGCTAGGTCAGAGTGTCTaGGGCCTGGGTGCCTGCTGTCTTTCTCACTTGGTCAGACCACAC | + |
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Preference number: 1 (lower is better) Translates to: GSWAVAIFLELGQSV*GLGACCLSHLVRPH Trigger: GTGTGGTCTGACCAAGTGAGAAAGACAGCAGGCACCCAGGCCTCAGACACTCTGACCTAGCTCCAGAAAGATGGCCACAGCCCAGCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CCA 90 bp | GCCATCCAAGCTGGAGCTCTCTATGGTATGTGCTGGAGACGTGAGTaGCGGCCATGTGTGGGACATCGAGACTCCCTCCTGGGATTTGCC | + |
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Preference number: 1 (lower is better) Translates to: AIQAGALYGMCWRRE*RPCVGHRDSLLGFA Trigger: GGCAAATCCCAGGAGGGAGTCTCGATGTCCCACACATGGCCGCCACTCACGTCTCCAGCACATACCATAGAGAGCTCCAGCTTGGATGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CCA 90 bp | GTCAGAGTGGCAGCCATCCAAGCTGGAGCTCTCTATGGTATGTGCTaGAGACGTGAGTGGCGGCCATGTGTGGGACATCGAGACTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: VRVAAIQAGALYGMC*RREWRPCVGHRDSL Trigger: GAGGGAGTCTCGATGTCCCACACATGGCCGCCACTCACGTCTCCAGCACATACCATAGAGAGCTCCAGCTTGGATGGCTGCCACTCTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR TCA 90 bp | CTTCTTGCTGCTTTCAAGGGACTAGAGGCCACGTGGACTGACCTGTaGGCAACCTGCACTCCTGCCCAGGGCCCTTTTGTGCTGAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: LLAAFKGLEATWTDL*ATCTPAQGPFVLSE Trigger: CTCACTCAGCACAAAAGGGCCCTGGGCAGGAGTGCAGGTTGCTCACAGGTCAGTCCACGTGGCCTCTAGTCCCTTGAAAGCAGCAAGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR GCA 90 bp | GATGTCAGAGTGGCAGCCATCCAAGCTGGAGCTCTCTATGGTATGTaGTGGAGACGTGAGTGGCGGCCATGTGTGGGACATCGAGACTCC | + |
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Preference number: 1 (lower is better) Translates to: DVRVAAIQAGALYGM*WRREWRPCVGHRDS Trigger: GGAGTCTCGATGTCCCACACATGGCCGCCACTCACGTCTCCAGCACATACCATAGAGAGCTCCAGCTTGGATGGCTGCCACTCTGACATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CCA 90 bp | CTGGAAGAGCACGTGGGAGAGACGCATGGCAAGAGGCAAGGCAGATaGTTGATAAGAAGCCACGATGCCCAGAGAAGCTGGTGCCTGAGC | + |
|
Preference number: 1 (lower is better) Translates to: LEEHVGETHGKRQGR*LIRSHDAQRSWCLS Trigger: GCTCAGGCACCAGCTTCTCTGGGCATCGTGGCTTCTTATCAACCATCTGCCTTGCCTCTTGCCATGCGTCTCTCCCACGTGCTCTTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CCA 90 bp | TCTTTCCCTGAGGCTGGCATAAGACACTGCCAGCAGTCTGCCTTCTaGTTGATGGTCCTCTGGCCCCTGCCTCAGTGGCAGCTTCTTTGC | + |
|
Preference number: 1 (lower is better) Translates to: SFPEAGIRHCQQSAF*LMVLWPLPQWQLLC Trigger: GCAAAGAAGCTGCCACTGAGGCAGGGGCCAGAGGACCATCAACCAGAAGGCAGACTGCTGGCAGTGTCTTATGCCAGCCTCAGGGAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR TCA 90 bp | TCTCTCACTTCTTGCTGCTTTCAAGGGACTAGAGGCCACGTGGACTaGCCTGTGAGCAACCTGCACTCCTGCCCAGGGCCCTTTTGTGCT | + |
|
Preference number: 1 (lower is better) Translates to: SLTSCCFQGTRGHVD*PVSNLHSCPGPFCA Trigger: AGCACAAAAGGGCCCTGGGCAGGAGTGCAGGTTGCTCACAGGTCAGTCCACGTGGCCTCTAGTCCCTTGAAAGCAGCAAGAAGTGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR TCA 90 bp | GTGTGGGCCTCCCTCAACCCATGTGCCACCCAGGGGCTGGGTGTGTaGTGGTCACGAGATTCTTTGAATGGCACTTCTAGTTCAGGGACT | + |
|
Preference number: 1 (lower is better) Translates to: VWASLNPCATQGLGV*WSRDSLNGTSSSGT Trigger: AGTCCCTGAACTAGAAGTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACATGGGTTGAGGGAGGCCCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CCA 90 bp | GCCCAAGGCCATGATTTCCCTGGAAGAGCACGTGGGAGAGACGCATaGCAAGAGGCAAGGCAGATGGTTGATAAGAAGCCACGATGCCCA | + |
|
Preference number: 1 (lower is better) Translates to: AQGHDFPGRARGRDA*QEARQMVDKKPRCP Trigger: TGGGCATCGTGGCTTCTTATCAACCATCTGCCTTGCCTCTTGCCATGCGTCTCTCCCACGTGCTCTTCCAGGGAAATCATGGCCTTGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR TCA 90 bp | GGGGACTGGCCACTGCATTGGTCACTTACAGGGACTTCCTCAGAGTaGCCCTCACTCCTGAAGGAGGTTCTGCTTCATGATCAGTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: GDWPLHWSLTGTSSE*PSLLKEVLLHDQWR Trigger: CCTCCACTGATCATGAAGCAGAACCTCCTTCAGGAGTGAGGGTCACTCTGAGGAAGTCCCTGTAAGTGACCAATGCAGTGGCCAGTCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR TCA 90 bp | GGACTCTTAAAGCAGAGTGAGAGGCCCCACCATCTGCAGGGCGAATaGAGGCCGCTCACAGAAGAAGCCTTGAAAGTAGTGACGTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: GLLKQSERPHHLQGE*RPLTEEALKVVTWG Trigger: TCCCCACGTCACTACTTTCAAGGCTTCTTCTGTGAGCGGCCTTCATTCGCCCTGCAGATGGTGGGGCCTCTCACTCTGCTTTAAGAGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR TCA 90 bp | GGTGTCCATGCACTGAAGCAGAAACTGAGCTGCTTAGTCTTTCCCTaGGGCTGGCATAAGACACTGCCAGCAGTCTGCCTTCTGGTTGAT | + |
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Preference number: 1 (lower is better) Translates to: GVHALKQKLSCLVFP*GWHKTLPAVCLLVD Trigger: ATCAACCAGAAGGCAGACTGCTGGCAGTGTCTTATGCCAGCCTCAGGGAAAGACTAAGCAGCTCAGTTTCTGCTTCAGTGCATGGACACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR GCA 90 bp | AGACACGCAGCTGTGAATGACAGTTCAGAGCTCAACATAAACTTGTaGTGTGAACAGGTACCGCCCCCTTCAACACGTACAGTCACGCGG | + |
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Preference number: 1 (lower is better) Translates to: RHAAVNDSSELNINL*CEQVPPPSTRTVTR Trigger: CCGCGTGACTGTACGTGTTGAAGGGGGCGGTACCTGTTCACAGCACAAGTTTATGTTGAGCTCTGAACTGTCATTCACAGCTGCGTGTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CCA 90 bp | GAGCTCTCTATGGTATGTGCTGGAGACGTGAGTGGCGGCCATGTGTaGGACATCGAGACTCCCTCCTGGGATTTGCCTTTTTCTGTTATT | + |
|
Preference number: 1 (lower is better) Translates to: ELSMVCAGDVSGGHV*DIETPSWDLPFSVI Trigger: AATAACAGAAAAAGGCAAATCCCAGGAGGGAGTCTCGATGTCCCACACATGGCCGCCACTCACGTCTCCAGCACATACCATAGAGAGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CCA 90 bp | ACACCGGTTGAAAGTCTCACAATTGAGTGGAGTCAGCAGCAGAGATaGACTTCCTCCCTGGTCTGTAAACCTGTGTGCAAACTCTCCCCA | + |
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Preference number: 1 (lower is better) Translates to: TPVESLTIEWSQQQR*TSSLVCKPVCKLSP Trigger: TGGGGAGAGTTTGCACACAGGTTTACAGACCAGGGAGGAAGTCCATCTCTGCTGCTGACTCCACTCAATTGTGAGACTTTCAACCGGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR GCA 90 bp | GTGATTTCTGCAGGCCAACACAACCAGTGTAAGCCTGCTCATGACTaGAAATGTCCCATTCTGTCCTTAACAGAAGGTTGCTGCCAGGTG | + |
|
Preference number: 1 (lower is better) Translates to: VISAGQHNQCKPAHD*KCPILSLTEGCCQV Trigger: CACCTGGCAGCAACCTTCTGTTAAGGACAGAATGGGACATTTGCAGTCATGAGCAGGCTTACACTGGTTGTGTTGGCCTGCAGAAATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CCA 90 bp | GGAAAGACAGAATTCCCCACACCGGTTGAAAGTCTCACAATTGAGTaGAGTCAGCAGCAGAGATGGACTTCCTCCCTGGTCTGTAAACCT | + |
|
Preference number: 1 (lower is better) Translates to: GKTEFPTPVESLTIE*SQQQRWTSSLVCKP Trigger: AGGTTTACAGACCAGGGAGGAAGTCCATCTCTGCTGCTGACTCCACTCAATTGTGAGACTTTCAACCGGTGTGGGGAATTCTGTCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR TCA 90 bp | GACACAGATAAAGGACATCCTGGGAGGCTGGTACAGGATGGGAGTTaGGCTTTGGTGAGTTATTGCTTTCTCTCACTTCTTGCTGCTTTC | + |
|
Preference number: 1 (lower is better) Translates to: DTDKGHPGRLVQDGS*ALVSYCFLSLLAAF Trigger: GAAAGCAGCAAGAAGTGAGAGAAAGCAATAACTCACCAAAGCTCAACTCCCATCCTGTACCAGCCTCCCAGGATGTCCTTTATCTGTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR TCA 90 bp | GGAAAGAGAATGTGTACTAACCTCAAGGCATGGAAGAGGGATGACTaGGAGACCAGGGAGAGTGAAGGGAAGCTGGACTTAAAACAGGTA | + |
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Preference number: 1 (lower is better) Translates to: GKRMCTNLKAWKRDD*ETRESEGKLDLKQV Trigger: TACCTGTTTTAAGTCCAGCTTCCCTTCACTCTCCCTGGTCTCTCAGTCATCCCTCTTCCATGCCTTGAGGTTAGTACACATTCTCTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CCA 90 bp | CTTGGTAGCAGGTACCTGGGAAAGGTGAATGGTATCTTACAAGTTTaGCACGCAAAGGCTGCACAGATCACAGAGGCTTTGGAAAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: LGSRYLGKVNGILQV*HAKAAQITEALERE Trigger: TTCTCTTTCCAAAGCCTCTGTGATCTGTGCAGCCTTTGCGTGCCAAACTTGTAAGATACCATTCACCTTTCCCAGGTACCTGCTACCAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR TCA 90 bp | GCAAGCTGGCTCACAAGCAAGCTTTCCTGTTTTGGCTATCTTTCATaGAGGTGTTCTAGCAACTTCAGGTGTCCATGCACTGAAGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: ASWLTSKLSCFGYLS*RCSSNFRCPCTEAE Trigger: TTCTGCTTCAGTGCATGGACACCTGAAGTTGCTAGAACACCTTCATGAAAGATAGCCAAAACAGGAAAGCTTGCTTGTGAGCCAGCTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CCA 90 bp | GGAGGATTTTCTTACTCGTCCTCAGTGGTAGTGAAATGCCCTTTGTaGATACCATCAGGTGAGGTAGGGAAGACATTCCAGAGGAAATCT | + |
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Preference number: 1 (lower is better) Translates to: GGFSYSSSVVVKCPL*IPSGEVGKTFQRKS Trigger: AGATTTCCTCTGGAATGTCTTCCCTACCTCACCTGATGGTATCCACAAAGGGCATTTCACTACCACTGAGGACGAGTAAGAAAATCCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CCA 90 bp | CACCATATTGTTTCTCTAAAACACACACAATACATTAGAGTGAGGTaGTGTCATTCAGAACAGGGAGGAGTTGAAGTGTGGGCCTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: HHIVSLKHTQYIRVR*CHSEQGGVEVWASL Trigger: GAGGGAGGCCCACACTTCAACTCCTCCCTGTTCTGAATGACACCACCTCACTCTAATGTATTGTGTGTGTTTTAGAGAAACAATATGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CCA 90 bp | GAATGGCAGAAAAGAAAGTCTTCAGAGGGTTATTTCCAGAGCATCTaGTTTCTCAGATGTGTTCCTCGGATGTCTGGAAAGACAGAATTC | + |
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Preference number: 1 (lower is better) Translates to: EWQKRKSSEGYFQSI*FLRCVPRMSGKTEF Trigger: GAATTCTGTCTTTCCAGACATCCGAGGAACACATCTGAGAAACCAGATGCTCTGGAAATAACCCTCTGAAGACTTTCTTTTCTGCCATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR-3UTR GCA 90 bp | AAGACACTGCCAGCAGTCTGCCTTCTGGTTGATGGTCCTCTGGCCCCTGCCTCATGGTGCCTGAGCTGCTaGAAGAGGTCCAGAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: KTLPAVCLLVDGPLAPASWCLSC*KRSRGW Trigger: CCAGCCTCTGGACCTCTTGCAGCAGCTCAGGCACCA...TGAGGCAGGGGCCAGAGGACCATCAACCAGAAGGCAGACTGCTGGCAGTGTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAGCCATTGAGGAAGACATGAGGTGGACCGCCTCCAGGTGCTGTGGGCACAGTGGAGAAGGAAATTaGGTCTGGCCTCCAGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: QEAIEEDMRWTASRCCGHSGEGN*VWPPGR Trigger: CCTCCCTGGAGGCCAGACTCAATTTCCTTCTCCACT...GTGCCCACAGCACCTGGAGGCGGTCCACCTCATGTCTTCCTCAATGGCTTCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CAA 90 bp | GAAGAGCACGTGGGAGAGACGCATGGCAAGAGGCAAGGCAGATGGTaGATAAGAAGCCACGATGCCCAGAGAAGCTGGTGCCTGAGCTGC | + |
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Preference number: 2 (lower is better) Translates to: EEHVGETHGKRQGRW*IRSHDAQRSWCLSC Trigger: GCAGCTCAGGCACCAGCTTCTCTGGGCATCGTGGCTTCTTATCAACCATCTGCCTTGCCTCTTGCCATGCGTCTCTCCCACGTGCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR-3UTR TCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACTATGTGCTGGAGACGTaGGTGGCGGCCATGTGTGGG | + |
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Preference number: 2 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHYVLET*VAAMCG Trigger: CCCACACATGGCCGCCACTCACGTCTCCAGCACATA...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR-3UTR TCA 90 bp | AAGACACTGCCAGCAGTCTGCCTTCTGGTTGATGGTCCTCTGGCCCCTGCCTCACTGTGGGCACTGTTGTaGTGTCAGAGTGGCAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: KTLPAVCLLVDGPLAPASLWALL*CQSGSH Trigger: ATGGCTGCCACTCTGACATCACAACAGTGCCCACAG...TGAGGCAGGGGCCAGAGGACCATCAACCAGAAGGCAGACTGCTGGCAGTGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR-3UTR TCA 90 bp | AAGACACTGCCAGCAGTCTGCCTTCTGGTTGATGGTCCTCTGGCCCCTGCCTCACCCTTTTGTGCTGAGTaGGTGACAGGCAGGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: KTLPAVCLLVDGPLAPASPFCAE*VTGRKP Trigger: TGGCTTCCTGCCTGTCACTCACTCAGCACAAAAGGG...TGAGGCAGGGGCCAGAGGACCATCAACCAGAAGGCAGACTGCTGGCAGTGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR-3UTR TCA 90 bp | AAGACACTGCCAGCAGTCTGCCTTCTGGTTGATGGTCCTCTGGCCCCTGCCTCAAAGGTTGCTGCCAGGTaGCTTGGTAGCAGGTACCTG | + |
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Preference number: 2 (lower is better) Translates to: KTLPAVCLLVDGPLAPASKVAAR*LGSRYL Trigger: CAGGTACCTGCTACCAAGTCACCTGGCAGCAACCTT...TGAGGCAGGGGCCAGAGGACCATCAACCAGAAGGCAGACTGCTGGCAGTGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR-3UTR GCA 90 bp | GAGTGTCTGAGGCCTGGGTGCCTGCTGTCTTTCTCACTTGGTCAGACCACACAGTGGTCCTCTGGCCCCTaGCTCAGTGGCAGCTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: ECLRPGCLLSFSLGQTTQWSSGP*LSGSFF Trigger: AAAGAAGCTGCCACTGAGGCAGGGGCCAGAGGACCA...CTGTGTGGTCTGACCAAGTGAGAAAGACAGCAGGCACCCAGGCCTCAGACACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR-3UTR CCA 90 bp | GAGTGTCTGAGGCCTGGGTGCCTGCTGTCTTTCTCACTTGGTCAGACCACACAGTGGTGCCCTGCTGTCTaGGGCAAGATGAGGGACACA | + |
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Preference number: 2 (lower is better) Translates to: ECLRPGCLLSFSLGQTTQWCPAV*GKMRDT Trigger: TGTGTCCCTCATCTTGCCCCAGACAGCAGGGCACCA...CTGTGTGGTCTGACCAAGTGAGAAAGACAGCAGGCACCCAGGCCTCAGACACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR-3UTR CCA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTCCCTGGAAGAGCACGTaGGAGAGACGCATGGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: PASVAASLLIPDGLPLVAPWKST*ERRMAR Trigger: TCTTGCCATGCGTCTCTCCCACGTGCTCTTCCAGGG...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CAA 90 bp | TCCTGGCCTACAGATGACCTCTGTCTCCTTGAGTGGAGAAGGAAATaGAGTCTGGCCTCCAGGGAGGGGACTGGCCACTGCATTGGTCAC | + |
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Preference number: 2 (lower is better) Translates to: SWPTDDLCLLEWRRK*SLASREGTGHCIGH Trigger: GTGACCAATGCAGTGGCCAGTCCCCTCCCTGGAGGCCAGACTCAATTTCCTTCTCCACTCAAGGAGACAGAGGTCATCTGTAGGCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CAA 90 bp | CTTCTGGTTGATGGTCCTCTGGCCCCTGCCTCAGTGGCAGCTTCTTaGCTAATCCCTGATGGGTTGCCTCTGGTCGCTGCAGCCATTAAC | + |
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Preference number: 2 (lower is better) Translates to: LLVDGPLAPASVAAS*LIPDGLPLVAAAIN Trigger: GTTAATGGCTGCAGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGGGGCCAGAGGACCATCAACCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CAA 90 bp | GCATCTGCCCACAAGGGACAAAGGGCCAAGTTTAGGGATGACAGCTaGGTACCAGGGAGCTGGGCTGTGGCCATCTTTCTGGAGCTAGGT | + |
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Preference number: 2 (lower is better) Translates to: ASAHKGQRAKFRDDS*VPGSWAVAIFLELG Trigger: ACCTAGCTCCAGAAAGATGGCCACAGCCCAGCTCCCTGGTACCAAGCTGTCATCCCTAAACTTGGCCCTTTGTCCCTTGTGGGCAGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTCTGTGGGCACTGTTGTaGTGTCAGAGTGGCAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: PASVAASLLIPDGLPLVALWALL*CQSGSH Trigger: ATGGCTGCCACTCTGACATCACAACAGTGCCCACAG...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR-3UTR GCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACTGGTCCTCTGGCCCCTaGCTCAGTGGCAGCTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHWSSGP*LSGSFF Trigger: AAAGAAGCTGCCACTGAGGCAGGGGCCAGAGGACCA...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR-3UTR GCA 90 bp | GAGTGTCTGAGGCCTGGGTGCCTGCTGTCTTTCTCACTTGGTCAGACCACACAGGCTGGCATAAGACACTaGCAGCAGTCTGCCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: ECLRPGCLLSFSLGQTTQAGIRH*QQSAFW Trigger: CCAGAAGGCAGACTGCTGGCAGTGTCTTATGCCAGC...CTGTGTGGTCTGACCAAGTGAGAAAGACAGCAGGCACCCAGGCCTCAGACACTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR-3UTR GCA 90 bp | TTAAGACTAGGACTCTTAAAGCAGAGTGAGAGGCCCCACCATCTGCAGGGCGAACTCCCTCAACCCATGTaGCACCCAGGGGCTGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: LRLGLLKQSERPHHLQGELPQPM*HPGAGC Trigger: ACACCCAGCCCCTGGGTGGCACATGGGTTGAGGGAG...TTCGCCCTGCAGATGGTGGGGCCTCTCACTCTGCTTTAAGAGTCCTAGTCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR-3UTR CCA 90 bp | ACTCAGGACCCCAGGCATCAAAGAGAACATAGGCCAGCTGCCAGAAACAGGGTTGGCAACAGGGCTGGCTaGGGAAGAGGGACCTTTGCT | + |
|
Preference number: 2 (lower is better) Translates to: TQDPRHQREHRPAARNRVGNRAG*GRGTFA Trigger: AGCAAAGGTCCCTCTTCCCCAGCCAGCCCTGTTGCC...AACCCTGTTTCTGGCAGCTGGCCTATGTTCTCTTTGATGCCTGGGGTCCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACGATGCCCAGAGAAGCTaGTGCCTGAGCTGCTGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHDAQRS*CLSCCK Trigger: CTTGCAGCAGCTCAGGCACCAGCTTCTCTGGGCATC...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACCCCTTTTGTGCTGAGTaGGTGACAGGCAGGAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHPFCAE*VTGRKP Trigger: TGGCTTCCTGCCTGTCACTCACTCAGCACAAAAGGG...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR TCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACAAGGTTGCTGCCAGGTaGCTTGGTAGCAGGTACCTG | + |
|
Preference number: 2 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHKVAAR*LGSRYL Trigger: CAGGTACCTGCTACCAAGTCACCTGGCAGCAACCTT...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR GCA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAAGCAGCCCTGGTGCCCTaGTGTCTGGGGCAAGATGAG | + |
|
Preference number: 2 (lower is better) Translates to: DQTRSWKGLNSTLFLAFEAALVP*CLGQDE Trigger: CTCATCTTGCCCCAGACAGCAGGGCACCAGGGCTGC...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | AAGACACTGCCAGCAGTCTGCCTTCTGGTTGATGGTCCTCTGGCCCCTGCCTCAGGCTCGTATGACATCTaGAGGCTGTTTTCCCAACAC | + |
|
Preference number: 2 (lower is better) Translates to: KTLPAVCLLVDGPLAPASGSYDI*RLFSQH Trigger: GTGTTGGGAAAACAGCCTCCAGATGTCATACGAGCC...TGAGGCAGGGGCCAGAGGACCATCAACCAGAAGGCAGACTGCTGGCAGTGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCTCACTTGGTCAGACCACACAGCAAGCTGGCTCACAAGCAAGCTTTCCTGTGGTTGATGGTCCTCTaGCCCCTGCCTCAGTGGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LSHLVRPHSKLAHKQAFLWLMVL*PLPQWQ Trigger: CTGCCACTGAGGCAGGGGCCAGAGGACCATCAACCA...CAGGAAAGCTTGCTTGTGAGCCAGCTTGCTGTGTGGTCTGACCAAGTGAGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGACTAGGACTCTTAAAGCAGAGTGAGAGGCCCCACCATCTGCAGGGCGAAGGGACTTCCTCAGAGTaGCCCTCACTCCTGAAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: LRLGLLKQSERPHHLQGEGTSSE*PSLLKE Trigger: CTCCTTCAGGAGTGAGGGTCACTCTGAGGAAGTCCC...TTCGCCCTGCAGATGGTGGGGCCTCTCACTCTGCTTTAAGAGTCCTAGTCTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR TCA 90 bp | ACTCAGGACCCCAGGCATCAAAGAGAACATAGGCCAGCTGCCAGAAACAGGGTTAGTGGAGAAGGAAATTaGGTCTGGCCTCCAGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: TQDPRHQREHRPAARNRVSGEGN*VWPPGR Trigger: CCTCCCTGGAGGCCAGACTCAATTTCCTTCTCCACT...AACCCTGTTTCTGGCAGCTGGCCTATGTTCTCTTTGATGCCTGGGGTCCTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGACTAGGACTCTTAAAGCAGAGTGAGAGGCCCCACCATCTGCAGGGCGAAGGCATGGAAGAGGGATaGCTGAGAGACCAGGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LRLGLLKQSERPHHLQGEGMEEG*LRDQGE Trigger: CTCTCCCTGGTCTCTCAGTCATCCCTCTTCCATGCC...TTCGCCCTGCAGATGGTGGGGCCTCTCACTCTGCTTTAAGAGTCCTAGTCTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR GCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACTGTCTGAGGCCTGGGTaGCTGCTGTCTTTCTCACTT | + |
|
Preference number: 2 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHCLRPG*LLSFSL Trigger: AAGTGAGAAAGACAGCAGGCACCCAGGCCTCAGACA...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGTGTCTGAGGCCTGGGTGCCTGCTGTCTTTCTCACTTGGTCAGACCACACAGAGGGACCTTTGCTGCTaGAGCTCAGTCAAGGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: ECLRPGCLLSFSLGQTTQRDLCC*SSVKES Trigger: ACTTTCCTTGACTGAGCTCCAGCAGCAAAGGTCCCT...CTGTGTGGTCTGACCAAGTGAGAAAGACAGCAGGCACCCAGGCCTCAGACACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCTCACTTGGTCAGACCACACAGCAAGCTGGCTCACAAGCAAGCTTTCCTGTGGTGCCCTGCTGTCTaGGGCAAGATGAGGGACACA | + |
|
Preference number: 2 (lower is better) Translates to: LSHLVRPHSKLAHKQAFLWCPAV*GKMRDT Trigger: TGTGTCCCTCATCTTGCCCCAGACAGCAGGGCACCA...CAGGAAAGCTTGCTTGTGAGCCAGCTTGCTGTGTGGTCTGACCAAGTGAGAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR TCA 90 bp | ACTCAGGACCCCAGGCATCAAAGAGAACATAGGCCAGCTGCCAGAAACAGGGTTGCGGCTGGATTCCACTaGTGTCTCTATCAGATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: TQDPRHQREHRPAARNRVAAGFH*CLYQMW Trigger: CCACATCTGATAGAGACATCAGTGGAATCCAGCCGC...AACCCTGTTTCTGGCAGCTGGCCTATGTTCTCTTTGATGCCTGGGGTCCTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR GCA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGGCAGCCCTGGTGCCCTaGTGTCTGGGGCAAGATGAG | + |
|
Preference number: 2 (lower is better) Translates to: PISASDYLLRLGLLKQSEAALVP*CLGQDE Trigger: CTCATCTTGCCCCAGACAGCAGGGCACCAGGGCTGC...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACGATGGACTTCCTCCCTaGTCTGTAAACCTGTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHDGLPP*SVNLCA Trigger: TGCACACAGGTTTACAGACCAGGGAGGAAGTCCATC...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAACTCCAGGGAGGGGACTaGCCACTGCATTGGTCACTT | + |
|
Preference number: 2 (lower is better) Translates to: DQTRSWKGLNSTLFLAFELQGGD*PLHWSL Trigger: AAGTGACCAATGCAGTGGCCAGTCCCCTCCCTGGAG...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAACGTGGGAGAGACGCATaGCAAGAGGCAAGGCAGATG | + |
|
Preference number: 2 (lower is better) Translates to: DQTRSWKGLNSTLFLAFERGRDA*QEARQM Trigger: CATCTGCCTTGCCTCTTGCCATGCGTCTCTCCCACG...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR TCA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAACAGGCAGGAAGCCATTaGGGAAGACATGAGGTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: DQTRSWKGLNSTLFLAFEQAGSH*GRHEVD Trigger: GTCCACCTCATGTCTTCCTCAATGGCTTCCTGCCTG...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR TCA 90 bp | GAGTGTCTGAGGCCTGGGTGCCTGCTGTCTTTCTCACTTGGTCAGACCACACAGGGAGTTGAGCTTTGGTaGGTTATTGCTTTCTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: ECLRPGCLLSFSLGQTTQGVELW*VIAFSH Trigger: GTGAGAGAAAGCAATAACTCACCAAAGCTCAACTCC...CTGTGTGGTCTGACCAAGTGAGAAAGACAGCAGGCACCCAGGCCTCAGACACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGACTAGGACTCTTAAAGCAGAGTGAGAGGCCCCACCATCTGCAGGGCGAATTCTTTGCTAATCCCTaGTGGGTTGCCTCTGGTCGC | + |
|
Preference number: 2 (lower is better) Translates to: LRLGLLKQSERPHHLQGEFFANP*WVASGR Trigger: GCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAA...TTCGCCCTGCAGATGGTGGGGCCTCTCACTCTGCTTTAAGAGTCCTAGTCTTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR TCA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGCTAGGTCAGAGTGTCTaGGGCCTGGGTGCCTGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: PISASDYLLRLGLLKQSELGQSV*GLGACC Trigger: ACAGCAGGCACCCAGGCCTCAGACACTCTGACCTAG...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR GCA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAAGGGAAGAGGGACCTTTaGTGCTGGAGCTCAGTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: DQTRSWKGLNSTLFLAFEGKRDL*CWSSVK Trigger: CTTGACTGAGCTCCAGCAGCAAAGGTCCCTCTTCCC...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR GCA 90 bp | AAGACACTGCCAGCAGTCTGCCTTCTGGTTGATGGTCCTCTGGCCCCTGCCTCACTCCCTCCTGGGATTTaGCTTTTTCTGTTATTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: KTLPAVCLLVDGPLAPASLPPGI*LFLLFS Trigger: GGAAAATAACAGAAAAAGGCAAATCCCAGGAGGGAG...TGAGGCAGGGGCCAGAGGACCATCAACCAGAAGGCAGACTGCTGGCAGTGTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR GCA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGTGGTGCCTGAGCTGCTaGAAGAGGTCCAGAGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: PISASDYLLRLGLLKQSEWCLSC*KRSRGW Trigger: CCAGCCTCTGGACCTCTTGCAGCAGCTCAGGCACCA...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCTCACTTGGTCAGACCACACAGCAAGCTGGCTCACAAGCAAGCTTTCCTGAGTCAGCAGCAGAGATaGACTTCCTCCCTGGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LSHLVRPHSKLAHKQAFLSQQQR*TSSLVC Trigger: ACAGACCAGGGAGGAAGTCCATCTCTGCTGCTGACT...CAGGAAAGCTTGCTTGTGAGCCAGCTTGCTGTGTGGTCTGACCAAGTGAGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | ACTCAGGACCCCAGGCATCAAAGAGAACATAGGCCAGCTGCCAGAAACAGGGTTGGCTCGTATGACATCTaGAGGCTGTTTTCCCAACAC | + |
|
Preference number: 2 (lower is better) Translates to: TQDPRHQREHRPAARNRVGSYDI*RLFSQH Trigger: GTGTTGGGAAAACAGCCTCCAGATGTCATACGAGCC...AACCCTGTTTCTGGCAGCTGGCCTATGTTCTCTTTGATGCCTGGGGTCCTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | CAGGAAGCCATTGAGGAAGACATGAGGTGGACCGCCTCCAGGTGCTGTGGGCACTTGGAGTTCTGGAAGTaGCCACATTTTCAAGTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: QEAIEEDMRWTASRCCGHLEFWK*PHFQVV Trigger: TACTACTTGAAAATGTGGCCACTTCCAGAACTCCAA...GTGCCCACAGCACCTGGAGGCGGTCCACCTCATGTCTTCCTCAATGGCTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAAGACATCCTGGGAGGCTaGTACAGGATGGGAGTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: DQTRSWKGLNSTLFLAFEDILGG*YRMGVE Trigger: CTCAACTCCCATCCTGTACCAGCCTCCCAGGATGTC...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTGATGCCCAGAGAAGCTaGTGCCTGAGCTGCTGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: KVVTWGGLINVEDFLTRPDAQRS*CLSCCK Trigger: CTTGCAGCAGCTCAGGCACCAGCTTCTCTGGGCATC...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTCCCTGGAAGAGCACGTaGGAGAGACGCATGGCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: KVVTWGGLINVEDFLTRPPWKST*ERRMAR Trigger: TCTTGCCATGCGTCTCTCCCACGTGCTCTTCCAGGG...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACGGTATCTTACAAGTTTaGCACGCAAAGGCTGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHGILQV*HAKAAQ Trigger: CTGTGCAGCCTTTGCGTGCCAAACTTGTAAGATACC...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CAA 90 bp | TCCTGGGAGGCTGGTACAGGATGGGAGTTGAGCTTTGGTGAGTTATaGCTTTCTCTCACTTCTTGCTGCTTTCAAGGGACTAGAGGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: SWEAGTGWELSFGEL*LSLTSCCFQGTRGH Trigger: GTGGCCTCTAGTCCCTTGAAAGCAGCAAGAAGTGAGAGAAAGCAATAACTCACCAAAGCTCAACTCCCATCCTGTACCAGCCTCCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CAA 90 bp | TGCAGACACGCAGCTGTGAATGACAGTTCAGAGCTCAACATAAACTaGTGCTGTGAACAGGTACCGCCCCCTTCAACACGTACAGTCACG | + |
|
Preference number: 2 (lower is better) Translates to: CRHAAVNDSSELNIN*CCEQVPPPSTRTVT Trigger: CGTGACTGTACGTGTTGAAGGGGGCGGTACCTGTTCACAGCACAAGTTTATGTTGAGCTCTGAACTGTCATTCACAGCTGCGTGTCTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAAAGTCAGCAGCAGAGATaGACTTCCTCCCTGGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: DQTRSWKGLNSTLFLAFESQQQR*TSSLVC Trigger: ACAGACCAGGGAGGAAGTCCATCTCTGCTGCTGACT...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACAGGTGTAGGGATGGGTaGAGAGTAAGACCTTTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHRCRDG*RVRPFN Trigger: GTTAAAAGGTCTTACTCTCCACCCATCCCTACACCT...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CAA 90 bp | TGTCTGGAAAGACAGAATTCCCCACACCGGTTGAAAGTCTCACAATaGAGTGGAGTCAGCAGCAGAGATGGACTTCCTCCCTGGTCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: CLERQNSPHRLKVSQ*SGVSSRDGLPPWSV Trigger: TACAGACCAGGGAGGAAGTCCATCTCTGCTGCTGACTCCACTCAATTGTGAGACTTTCAACCGGTGTGGGGAATTCTGTCTTTCCAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR TCA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGCAGGCAGGAAGCCATTaGGGAAGACATGAGGTGGAC | + |
|
Preference number: 2 (lower is better) Translates to: PISASDYLLRLGLLKQSEQAGSH*GRHEVD Trigger: GTCCACCTCATGTCTTCCTCAATGGCTTCCTGCCTG...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR TCA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGATAGGCCCAAGGCCATaGTTTCCCTGGAAGAGCACG | + |
|
Preference number: 2 (lower is better) Translates to: PISASDYLLRLGLLKQSEIGPRP*FPWKST Trigger: CGTGCTCTTCCAGGGAAATCATGGCCTTGGGCCTAT...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR GCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACTGCCAGAAACAGGGTTaGATATGGAATCAGTACTCT | + |
|
Preference number: 2 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHCQKQG*IWNQYS Trigger: AGAGTACTGATTCCATATGCAACCCTGTTTCTGGCA...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGACTGTGTGTGATACTCCCCTTACGAGGTCTGATTTTGCTTGCTTTCCATTTTACTGGCAACAGGGCTaGCTGGGGAAGAGGGACCTT | + |
|
Preference number: 2 (lower is better) Translates to: VTVCDTPLTRSDFACFPFYWQQG*LGKRDL Trigger: AAGGTCCCTCTTCCCCAGCCAGCCCTGTTGCCAGTA...AAATGGAAAGCAAGCAAAATCAGACCTCGTAAGGGGAGTATCACACACAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTAAGAGGTCCAGAGGCTaGTTTCTTAGCAGCCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: KVVTWGGLINVEDFLTRPKRSRG*FLSSPG Trigger: ACCAGGGCTGCTAAGAAACCAGCCTCTGGACCTCTT...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGTGTCTGAGGCCTGGGTGCCTGCTGTCTTTCTCACTTGGTCAGACCACACAGACTCAACCCTTTTTCTaGCCTTTGAATTCTAGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: ECLRPGCLLSFSLGQTTQTQPFF*PLNSSN Trigger: GTTGCTAGAATTCAAAGGCCAGAAAAAGGGTTGAGT...CTGTGTGGTCTGACCAAGTGAGAAAGACAGCAGGCACCCAGGCCTCAGACACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTAAACAGGGTTGCATATaGAATCAGTACTCTCAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: PASVAASLLIPDGLPLVAKQGCI*NQYSQE Trigger: CTCTTGAGAGTACTGATTCCATATGCAACCCTGTTT...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACCCTGGGAAAGGTGAATaGTATCTTACAAGTTTGGCA | + |
|
Preference number: 2 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHPGKGE*YLTSLA Trigger: TGCCAAACTTGTAAGATACCATTCACCTTTCCCAGG...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CAA 90 bp | GATGTGTTCCTCGGATGTCTGGAAAGACAGAATTCCCCACACCGGTaGAAAGTCTCACAATTGAGTGGAGTCAGCAGCAGAGATGGACTT | + |
|
Preference number: 2 (lower is better) Translates to: DVFLGCLERQNSPHR*KVSQLSGVSSRDGL Trigger: AAGTCCATCTCTGCTGCTGACTCCACTCAATTGTGAGACTTTCAACCGGTGTGGGGAATTCTGTCTTTCCAGACATCCGAGGAACACATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGACTAGGACTCTTAAAGCAGAGTGAGAGGCCCCACCATCTGCAGGGCGAAGGAGTTGAGCTTTGGTaGGTTATTGCTTTCTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: LRLGLLKQSERPHHLQGEGVELW*VIAFSH Trigger: GTGAGAGAAAGCAATAACTCACCAAAGCTCAACTCC...TTCGCCCTGCAGATGGTGGGGCCTCTCACTCTGCTTTAAGAGTCCTAGTCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR GCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACAGGTCTGATTTTGCTTaGTTTCCATTTTGTGGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHRSDFA*FPFCGQ Trigger: TTGGCCACAAAATGGAAAGCAAGCAAAATCAGACCT...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTGATGGACTTCCTCCCTaGTCTGTAAACCTGTGTGCA | + |
|
Preference number: 2 (lower is better) Translates to: KVVTWGGLINVEDFLTRPDGLPP*SVNLCA Trigger: TGCACACAGGTTTACAGACCAGGGAGGAAGTCCATC...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | GAGTGTCTGAGGCCTGGGTGCCTGCTGTCTTTCTCACTTGGTCAGACCACACAGTTTTGTTTGGAGTTCTaGAAGTGGCCACATTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: ECLRPGCLLSFSLGQTTQFCLEF*KWPHFQ Trigger: TTGAAAATGTGGCCACTTCCAGAACTCCAAACAAAA...CTGTGTGGTCTGACCAAGTGAGAAAGACAGCAGGCACCCAGGCCTCAGACACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTTTTTGTTTGGAGTTCTaGAAGTGGCCACATTTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: PASVAASLLIPDGLPLVAFCLEF*KWPHFQ Trigger: TTGAAAATGTGGCCACTTCCAGAACTCCAAACAAAA...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGAAGAGGTCCAGAGGCTaGTTTCTTAGCAGCCCTGGT | + |
|
Preference number: 2 (lower is better) Translates to: PISASDYLLRLGLLKQSEKRSRG*FLSSPG Trigger: ACCAGGGCTGCTAAGAAACCAGCCTCTGGACCTCTT...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGGATCAGACAAGGAGCTaGAAGGGGCTCAACTCAACC | + |
|
Preference number: 2 (lower is better) Translates to: PISASDYLLRLGLLKQSEDQTRS*KGLNST Trigger: GGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CAA 90 bp | GGTCAGACCACACAGCAAGCTGGCTCACAAGCAAGCTTTCCTGTTTaGGCTATCTTTCATGAAGGTGTTCTAGCAACTTCAGGTGTCCAT | + |
|
Preference number: 2 (lower is better) Translates to: GQTTQQAGSQASFPV*AIFHEGVLATSGVH Trigger: ATGGACACCTGAAGTTGCTAGAACACCTTCATGAAAGATAGCCAAAACAGGAAAGCTTGCTTGTGAGCCAGCTTGCTGTGTGGTCTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CAA 90 bp | CGTGGAGGATTTTCTTACTCGTCCTCAGTGGTAGTGAAATGCCCTTaGTGGATACCATCAGGTGAGGTAGGGAAGACATTCCAGAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RGGFSYSSSVVVKCP*WIPSGEVGKTFQRK Trigger: TTTCCTCTGGAATGTCTTCCCTACCTCACCTGATGGTATCCACAAAGGGCATTTCACTACCACTGAGGACGAGTAAGAAAATCCTCCACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCTCACTTGGTCAGACCACACAGCAAGCTGGCTCACAAGCAAGCTTTCCTGGGTACCTGGGAAAGGTaGATGGTATCTTACAAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LSHLVRPHSKLAHKQAFLGTWER*MVSYKF Trigger: AAACTTGTAAGATACCATTCACCTTTCCCAGGTACC...CAGGAAAGCTTGCTTGTGAGCCAGCTTGCTGTGTGGTCTGACCAAGTGAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR GCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACAAAGAAGTTTCGAAGTaGTATACCTTGACACCACTA | + |
|
Preference number: 2 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHKEVSK*YTLTPL Trigger: TAGTGGTGTCAAGGTATAGCACTTCGAAACTTCTTT...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | ACTCAGGACCCCAGGCATCAAAGAGAACATAGGCCAGCTGCCAGAAACAGGGTTTATTTTCCTTTTGTTTaGAGTTCTGGAAGTGGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: TQDPRHQREHRPAARNRVYFPFV*SSGSGH Trigger: GTGGCCACTTCCAGAACTCCAAACAAAAGGAAAATA...AACCCTGTTTCTGGCAGCTGGCCTATGTTCTCTTTGATGCCTGGGGTCCTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTGGTATCTTACAAGTTTaGCACGCAAAGGCTGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: KVVTWGGLINVEDFLTRPGILQV*HAKAAQ Trigger: CTGTGCAGCCTTTGCGTGCCAAACTTGTAAGATACC...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCTCACTTGGTCAGACCACACAGCAAGCTGGCTCACAAGCAAGCTTTCCTGCACTGTCATTTGAGGTaGAGATTGGAGACCTTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LSHLVRPHSKLAHKQAFLHCHLR*RLETLK Trigger: TTTCAAGGTCTCCAATCTCCACCTCAAATGACAGTG...CAGGAAAGCTTGCTTGTGAGCCAGCTTGCTGTGTGGTCTGACCAAGTGAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CAA 90 bp | ATCTTACAAGTTTGGCACGCAAAGGCTGCACAGATCACAGAGGCTTaGGAAAGAGAATGTGTACTAACCTCAAGGCATGGAAGAGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: ILQVWHAKAAQITEA*ERECVLTSRHGRGM Trigger: CATCCCTCTTCCATGCCTTGAGGTTAGTACACATTCTCTTTCCAAAGCCTCTGTGATCTGTGCAGCCTTTGCGTGCCAAACTTGTAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR TCA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTGGAGATTGGAGACCTTaGAAAGAAGTTTCGAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: KVVTWGGLINVEDFLTRPGDWRP*KEVSKC Trigger: GCACTTCGAAACTTCTTTTCAAGGTCTCCAATCTCC...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR GCA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAACTCCCTCCTGGGATTTaGCTTTTTCTGTTATTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: DQTRSWKGLNSTLFLAFELPPGI*LFLLFS Trigger: GGAAAATAACAGAAAAAGGCAAATCCCAGGAGGGAG...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR GCA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGTCTCTCACTTCTTGCTaGTTTCAAGGGACTAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: PISASDYLLRLGLLKQSESLTSC*FQGTRG Trigger: GCCTCTAGTCCCTTGAAAGCAGCAAGAAGTGAGAGA...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR GCA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAACTTTCTCTCACTTCTTaGTGCTTTCAAGGGACTAGA | + |
|
Preference number: 2 (lower is better) Translates to: DQTRSWKGLNSTLFLAFELSLTS*CFQGTR Trigger: TCTAGTCCCTTGAAAGCAGCAAGAAGTGAGAGAAAG...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | ACTCAACCCTTTTTCTGGCCTTTGAATTCTAGCAACTGTCATTTAGAAGTCACTTACTGGCAACAGGGCTaGCTGGGGAAGAGGGACCTT | + |
|
Preference number: 2 (lower is better) Translates to: TQPFFWPLNSSNCHLEVTYWQQG*LGKRDL Trigger: AAGGTCCCTCTTCCCCAGCCAGCCCTGTTGCCAGTA...AGTGACTTCTAAATGACAGTTGCTAGAATTCAAAGGCCAGAAAAAGGGTTGAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | TTAAGACTAGGACTCTTAAAGCAGAGTGAGAGGCCCCACCATCTGCAGGGCGAATTGGAGTTCTGGAAGTaGCCACATTTTCAAGTAGTA | + |
|
Preference number: 2 (lower is better) Translates to: LRLGLLKQSERPHHLQGELEFWK*PHFQVV Trigger: TACTACTTGAAAATGTGGCCACTTCCAGAACTCCAA...TTCGCCCTGCAGATGGTGGGGCCTCTCACTCTGCTTTAAGAGTCCTAGTCTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CAA 90 bp | GTTATCAGTCTTTCCTCCCAGAATCACAGTGTAGATAGTCATTCCTaGTCCTCTCTAGGAATCCTCAGGCCACGGATTAGCAGAACACAA | + |
|
Preference number: 2 (lower is better) Translates to: VISLSSQNHSVDSHS*SSLGILRPRISRTQ Trigger: TTGTGTTCTGCTAATCCGTGGCCTGAGGATTCCTAGAGAGGACAAGGAATGACTATCTACACTGTGATTCTGGGAGGAAAGACTGATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR GCA 90 bp | ACTCAACCCTTTTTCTGGCCTTTGAATTCTAGCAACTGTCATTTAGAAGTCACTGGGAAGAGGGACCTTTaGTGCTGGAGCTCAGTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: TQPFFWPLNSSNCHLEVTGKRDL*CWSSVK Trigger: CTTGACTGAGCTCCAGCAGCAAAGGTCCCTCTTCCC...AGTGACTTCTAAATGACAGTTGCTAGAATTCAAAGGCCAGAAAAAGGGTTGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR GCA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTCTTTCTCTCACTTCTTaGTGCTTTCAAGGGACTAGA | + |
|
Preference number: 2 (lower is better) Translates to: KVVTWGGLINVEDFLTRPLSLTS*CFQGTR Trigger: TCTAGTCCCTTGAAAGCAGCAAGAAGTGAGAGAAAG...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR GCA 90 bp | GTGACTGTGTGTGATACTCCCCTTACGAGGTCTGATTTTGCTTGCTTTCCATTTAAGCCTGCTCATGACTaGAAATGTCCCATTCTGTCC | + |
|
Preference number: 2 (lower is better) Translates to: VTVCDTPLTRSDFACFPFKPAHD*KCPILS Trigger: GGACAGAATGGGACATTTGCAGTCATGAGCAGGCTT...AAATGGAAAGCAAGCAAAATCAGACCTCGTAAGGGGAGTATCACACACAGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTCACTGTCATTTGAGGTaGAGATTGGAGACCTTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: KVVTWGGLINVEDFLTRPHCHLR*RLETLK Trigger: TTTCAAGGTCTCCAATCTCCACCTCAAATGACAGTG...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGTTGCTTTCCATTTTGTaGCCAAACCCGTTATCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: PISASDYLLRLGLLKQSELLSIL*PNPLSA Trigger: GGCTGATAACGGGTTTGGCCACAAAATGGAAAGCAA...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR TCA 90 bp | ACTCAACCCTTTTTCTGGCCTTTGAATTCTAGCAACTGTCATTTAGAAGTCACTAGTGACCCTCACTCCTaGAGGAGGTTCTGCTTCATG | + |
|
Preference number: 2 (lower is better) Translates to: TQPFFWPLNSSNCHLEVTSDPHS*RRFCFM Trigger: CATGAAGCAGAACCTCCTTCAGGAGTGAGGGTCACT...AGTGACTTCTAAATGACAGTTGCTAGAATTCAAAGGCCAGAAAAAGGGTTGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR GCA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGTGCCAGAAACAGGGTTaGATATGGAATCAGTACTCT | + |
|
Preference number: 2 (lower is better) Translates to: PISASDYLLRLGLLKQSECQKQG*IWNQYS Trigger: AGAGTACTGATTCCATATGCAACCCTGTTTCTGGCA...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR GCA 90 bp | GTGACTGTGTGTGATACTCCCCTTACGAGGTCTGATTTTGCTTGCTTTCCATTTAACTTCAGGTGTCCATaGACTGAAGCAGAAACTGAG | + |
|
Preference number: 2 (lower is better) Translates to: VTVCDTPLTRSDFACFPFNFRCP*TEAETE Trigger: CTCAGTTTCTGCTTCAGTGCATGGACACCTGAAGTT...AAATGGAAAGCAAGCAAAATCAGACCTCGTAAGGGGAGTATCACACACAGTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CCA 90 bp | ACTCAACCCTTTTTCTGGCCTTTGAATTCTAGCAACTGTCATTTAGAAGTCACTAGTCTCACAATTGAGTaGAGTCAGCAGCAGAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: TQPFFWPLNSSNCHLEVTSLTIE*SQQQRW Trigger: CCATCTCTGCTGCTGACTCCACTCAATTGTGAGACT...AGTGACTTCTAAATGACAGTTGCTAGAATTCAAAGGCCAGAAAAAGGGTTGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR TCA 72 bp | CCTGCCAGTCCCGGCACAGCGCAGCCAGCCCCGGCATaGGGAACTGGCCCGCCATGGCCACGAAGCTCGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PASPGTAQPAPA*GTGPPWPRSSP Trigger: TGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCGGGGCTGGCTGCGCTGTGCCGGGACTGGCAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145038.8 |
||
| 3UTR CCA 72 bp | TCCCGGCACAGCGCAGCCAGCCCCGGCATGAGGAACTaGCCCGCCATGGCCACGAAGCTCGCCACCATGGTA | + |
|
Preference number: 3 (lower is better) Translates to: SRHSAASPGMRN*PAMATKLATMV Trigger: TACCATGGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCGGGGCTGGCTGCGCTGTGCCGGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145038.8 |
||
| 3UTR CCA 72 bp | AGCTGGTGCCTGAGCTGCTGCAAGAGGTCCAGAGGCTaGTTTCTTAGCAGCCCTGGTGCCCTGCTGTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SWCLSCCKRSRG*FLSSPGALLSG Trigger: CCCAGACAGCAGGGCACCAGGGCTGCTAAGAAACCAGCCTCTGGACCTCTTGCAGCAGCTCAGGCACCAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR TCA 72 bp | GAGGTGGACCGCCTCCAGGTGCTGTGGGCACTGTTGTaGTGTCAGAGTGGCAGCCATCCAAGCTGGAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: EVDRLQVLWALL*CQSGSHPSWSS Trigger: AGAGCTCCAGCTTGGATGGCTGCCACTCTGACATCACAACAGTGCCCACAGCACCTGGAGGCGGTCCACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR TCA 72 bp | TCTTGCTGCTTTCAAGGGACTAGAGGCCACGTGGACTaGCCTGTGAGCAACCTGCACTCCTGCCCAGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SCCFQGTRGHVD*PVSNLHSCPGP Trigger: GGGCCCTGGGCAGGAGTGCAGGTTGCTCACAGGTCAGTCCACGTGGCCTCTAGTCCCTTGAAAGCAGCAAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CCA 72 bp | GAGGCTGGCATAAGACACTGCCAGCAGTCTGCCTTCTaGTTGATGGTCCTCTGGCCCCTGCCTCAGTGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: EAGIRHCQQSAF*LMVLWPLPQWQ Trigger: CTGCCACTGAGGCAGGGGCCAGAGGACCATCAACCAGAAGGCAGACTGCTGGCAGTGTCTTATGCCAGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR TCA 72 bp | GCTTTCAAGGGACTAGAGGCCACGTGGACTGACCTGTaGGCAACCTGCACTCCTGCCCAGGGCCCTTTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: AFKGLEATWTDL*ATCTPAQGPFV Trigger: CACAAAAGGGCCCTGGGCAGGAGTGCAGGTTGCTCACAGGTCAGTCCACGTGGCCTCTAGTCCCTTGAAAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR GCA 72 bp | GTGGCAGCCATCCAAGCTGGAGCTCTCTATGGTATGTaGTGGAGACGTGAGTGGCGGCCATGTGTGGGACAT | + |
|
Preference number: 3 (lower is better) Translates to: VAAIQAGALYGM*WRREWRPCVGH Trigger: ATGTCCCACACATGGCCGCCACTCACGTCTCCAGCACATACCATAGAGAGCTCCAGCTTGGATGGCTGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CCA 72 bp | GCAGCCATCCAAGCTGGAGCTCTCTATGGTATGTGCTaGAGACGTGAGTGGCGGCCATGTGTGGGACATCGA | + |
|
Preference number: 3 (lower is better) Translates to: AAIQAGALYGMC*RREWRPCVGHR Trigger: TCGATGTCCCACACATGGCCGCCACTCACGTCTCCAGCACATACCATAGAGAGCTCCAGCTTGGATGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTCCAAGGACTCTCTGCTaGAGAGGCACAGCTGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PASVAASLLIPDGLPLVAPRTLC*RGTAVH Trigger: ATGGACAGCTGTGCCTCTCAAGCAGAGAGTCCTTGG...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACGGGGAAGAGGGACCTTaGCTGCTGGAGCTCAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHGEEGP*LLELSQ Trigger: TTGACTGAGCTCCAGCAGCAAAGGTCCCTCTTCCCC...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR TCA 72 bp | CAGATGACCTCTGTCTCCTTGAGTGGAGAAGGAAATTaGGTCTGGCCTCCAGGGAGGGGACTGGCCACTGCA | + |
|
Preference number: 3 (lower is better) Translates to: QMTSVSLSGEGN*VWPPGRGLATA Trigger: TGCAGTGGCCAGTCCCCTCCCTGGAGGCCAGACTCAATTTCCTTCTCCACTCAAGGAGACAGAGGTCATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR TCA 72 bp | GCTGTGGCCATCTTTCTGGAGCTAGGTCAGAGTGTCTaGGGCCTGGGTGCCTGCTGTCTTTCTCACTTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: AVAIFLELGQSV*GLGACCLSHLV Trigger: GACCAAGTGAGAAAGACAGCAGGCACCCAGGCCTCAGACACTCTGACCTAGCTCCAGAAAGATGGCCACAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTCAGGACCCCAGGCATCAAAGAGAACATAGGCCAGCTGCCAGAAACAGGGTTGGGGAAGAGGGACCTTaGCTGCTGGAGCTCAGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TQDPRHQREHRPAARNRVGEEGP*LLELSQ Trigger: TTGACTGAGCTCCAGCAGCAAAGGTCCCTCTTCCCC...AACCCTGTTTCTGGCAGCTGGCCTATGTTCTCTTTGATGCCTGGGGTCCTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR GCA 72 bp | AAATTGAGTCTGGCCTCCAGGGAGGGGACTGGCCACTaGATTGGTCACTTACAGGGACTTCCTCAGAGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: KLSLASREGTGH*IGHLQGLPQSD Trigger: GTCACTCTGAGGAAGTCCCTGTAAGTGACCAATGCAGTGGCCAGTCCCCTCCCTGGAGGCCAGACTCAATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR GCA 72 bp | TGGCAACAGGGCTGGCTGGGGAAGAGGGACCTTTGCTaGTGGAGCTCAGTCAAGGAAAGTGTCTTAGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: WQQGWLGKRDLC*WSSVKESVLAE Trigger: TTCTGCTAAGACACTTTCCTTGACTGAGCTCCAGCAGCAAAGGTCCCTCTTCCCCAGCCAGCCCTGTTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR GCA 72 bp | ACGCGGCTCTTAGAGGAAAAGCACGCATGGTTGGGTTaGAGAAAGGACAGAGGTAGGGAGGCGTTCCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: TRLLEEKHAWLG*RKDRGREAFLT Trigger: AGTGAGGAACGCCTCCCTACCTCTGTCCTTTCTGCAACCCAACCATGCGTGCTTTTCCTCTAAGAGCCGCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CCA 72 bp | GAGAAGGAAATTGAGTCTGGCCTCCAGGGAGGGGACTaGCCACTGCATTGGTCACTTACAGGGACTTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: EKEIESGLQGGD*PLHWSLTGTSS Trigger: TGAGGAAGTCCCTGTAAGTGACCAATGCAGTGGCCAGTCCCCTCCCTGGAGGCCAGACTCAATTTCCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CCA 72 bp | GCCAAGTTTAGGGATGACAGCTTGGTACCAGGGAGCTaGGCTGTGGCCATCTTTCTGGAGCTAGGTCAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: AKFRDDSLVPGS*AVAIFLELGQS Trigger: ACTCTGACCTAGCTCCAGAAAGATGGCCACAGCCCAGCTCCCTGGTACCAAGCTGTCATCCCTAAACTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCAGAGTGGCAGCCATCCAAGCTGGAGCTCTCTATGGTATGTGCTGGAGACGAGTGGAGAAGGAAATaGAGTCTGGCCTCCAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: MSEWQPSKLELSMVCAGDEWRRK*SLASRE Trigger: CTCCCTGGAGGCCAGACTCAATTTCCTTCTCCACTC...GTCTCCAGCACATACCATAGAGAGCTCCAGCTTGGATGGCTGCCACTCTGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCAGAGTGGCAGCCATCCAAGCTGGAGCTCTCTATGGTATGTGCTGGAGACCCAAGGACTCTCTGCTaGAGAGGCACAGCTGTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: MSEWQPSKLELSMVCAGDPRTLC*RGTAVH Trigger: ATGGACAGCTGTGCCTCTCAAGCAGAGAGTCCTTGG...GTCTCCAGCACATACCATAGAGAGCTCCAGCTTGGATGGCTGCCACTCTGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR TCA 72 bp | TCCCTCAACCCATGTGCCACCCAGGGGCTGGGTGTGTaGTGGTCACGAGATTCTTTGAATGGCACTTCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: SLNPCATQGLGV*WSRDSLNGTSS Trigger: ACTAGAAGTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACATGGGTTGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CCA 72 bp | CAACAGGGCTGGCTGGGGAAGAGGGACCTTTGCTGCTaGAGCTCAGTCAAGGAAAGTGTCTTAGCAGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: QQGWLGKRDLCC*SSVKESVLAET Trigger: TGTTTCTGCTAAGACACTTTCCTTGACTGAGCTCCAGCAGCAAAGGTCCCTCTTCCCCAGCCAGCCCTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTCAGGACCCCAGGCATCAAAGAGAACATAGGCCAGCTGCCAGAAACAGGGTTAGGCAAGGCAGATGGTaGATAAGAAGCCACGATGCC | + |
|
Preference number: 3 (lower is better) Translates to: TQDPRHQREHRPAARNRVRQGRW*IRSHDA Trigger: GGCATCGTGGCTTCTTATCAACCATCTGCCTTGCCT...AACCCTGTTTCTGGCAGCTGGCCTATGTTCTCTTTGATGCCTGGGGTCCTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGACTAGGACTCTTAAAGCAGAGTGAGAGGCCCCACCATCTGCAGGGCGAATTGCTGCCAGGTGACTaGGTAGCAGGTACCTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LRLGLLKQSERPHHLQGELLPGD*VAGTWE Trigger: TTCCCAGGTACCTGCTACCAAGTCACCTGGCAGCAA...TTCGCCCTGCAGATGGTGGGGCCTCTCACTCTGCTTTAAGAGTCCTAGTCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACTGCTGTCTTTCTCACTaGGTCAGACCACACAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHCCLSH*VRPHSK Trigger: CTTGCTGTGTGGTCTGACCAAGTGAGAAAGACAGCA...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR TCA 72 bp | GCACTGAAGCAGAAACTGAGCTGCTTAGTCTTTCCCTaGGGCTGGCATAAGACACTGCCAGCAGTCTGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ALKQKLSCLVFP*GWHKTLPAVCL Trigger: AAGGCAGACTGCTGGCAGTGTCTTATGCCAGCCTCAGGGAAAGACTAAGCAGCTCAGTTTCTGCTTCAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAAGAGTGGAGAAGGAAATaGAGTCTGGCCTCCAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: DQTRSWKGLNSTLFLAFEEWRRK*SLASRE Trigger: CTCCCTGGAGGCCAGACTCAATTTCCTTCTCCACTC...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCTCACTTGGTCAGACCACACAGCAAGCTGGCTCACAAGCAAGCTTTCCTGTACTCTCAAGAGGGCTaGATCAAGGCGGCTGGATTC | + |
|
Preference number: 3 (lower is better) Translates to: LSHLVRPHSKLAHKQAFLYSQEG*IKAAGF Trigger: GAATCCAGCCGCCTTGATCAAGCCCTCTTGAGAGTA...CAGGAAAGCTTGCTTGTGAGCCAGCTTGCTGTGTGGTCTGACCAAGTGAGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGACACTGCCAGCAGTCTGCCTTCTGGTTGATGGTCCTCTGGCCCCTGCCTCACATTTGAGGTGGAGATaGGAGACCTTGAAAAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: KTLPAVCLLVDGPLAPASHLRWR*ETLKRS Trigger: ACTTCTTTTCAAGGTCTCCAATCTCCACCTCAAATG...TGAGGCAGGGGCCAGAGGACCATCAACCAGAAGGCAGACTGCTGGCAGTGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | GAGTGTCTGAGGCCTGGGTGCCTGCTGTCTTTCTCACTTGGTCAGACCACACAGCAGATCACAGAGGCTTaGGAAAGAGAATGTGTACTA | + |
|
Preference number: 3 (lower is better) Translates to: ECLRPGCLLSFSLGQTTQQITEA*ERECVL Trigger: TAGTACACATTCTCTTTCCAAAGCCTCTGTGATCTG...CTGTGTGGTCTGACCAAGTGAGAAAGACAGCAGGCACCCAGGCCTCAGACACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR TCA 72 bp | CCACTGCATTGGTCACTTACAGGGACTTCCTCAGAGTaGCCCTCACTCCTGAAGGAGGTTCTGCTTCATGAT | + |
|
Preference number: 3 (lower is better) Translates to: PLHWSLTGTSSE*PSLLKEVLLHD Trigger: ATCATGAAGCAGAACCTCCTTCAGGAGTGAGGGTCACTCTGAGGAAGTCCCTGTAAGTGACCAATGCAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGTCAGAGTGGCAGCCATCCAAGCTGGAGCTCTCTATGGTATGTGCTGGAGACTTGAAAGTCTCACAATaGAGTGGAGTCAGCAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: MSEWQPSKLELSMVCAGDLKVSQ*SGVSSR Trigger: TCTGCTGCTGACTCCACTCAATTGTGAGACTTTCAA...GTCTCCAGCACATACCATAGAGAGCTCCAGCTTGGATGGCTGCCACTCTGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACCATTTGAGGTGGAGATaGGAGACCTTGAAAAGAAGT | + |
|
Preference number: 3 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHHLRWR*ETLKRS Trigger: ACTTCTTTTCAAGGTCTCCAATCTCCACCTCAAATG...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR GCA 72 bp | GCAGGCCAACACAACCAGTGTAAGCCTGCTCATGACTaGAAATGTCCCATTCTGTCCTTAACAGAAGGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: AGQHNQCKPAHD*KCPILSLTEGC Trigger: GCAACCTTCTGTTAAGGACAGAATGGGACATTTGCAGTCATGAGCAGGCTTACACTGGTTGTGTTGGCCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CCA 72 bp | ATGGCACTTCTAGTTCAGGGACTTCTCGTTTGGCTCTaGGAAGTAGTCGTGACTGTGTGTGATACTCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: MALLVQGLLVWL*EVVVTVCDTPL Trigger: AAGGGGAGTATCACACACAGTCACGACTACTTCCCAGAGCCAAACGAGAAGTCCCTGAACTAGAAGTGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CCA 72 bp | AGGCCGCTCACAGAAGAAGCCTTGAAAGTAGTGACGTaGGGAGGTCTGATCAACGTGGAGGATTTTCTTACT | + |
|
Preference number: 3 (lower is better) Translates to: RPLTEEALKVVT*GGLINVEDFLT Trigger: AGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTTCAAGGCTTCTTCTGTGAGCGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | ACTCAGGACCCCAGGCATCAAAGAGAACATAGGCCAGCTGCCAGAAACAGGGTTCCCTTTTTCTGGCCTTaGAATTCTAGCAACTGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: TQDPRHQREHRPAARNRVPFFWP*NSSNCH Trigger: ATGACAGTTGCTAGAATTCAAAGGCCAGAAAAAGGG...AACCCTGTTTCTGGCAGCTGGCCTATGTTCTCTTTGATGCCTGGGGTCCTGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR TCA 72 bp | CTGGGAGGCTGGTACAGGATGGGAGTTGAGCTTTGGTaGGTTATTGCTTTCTCTCACTTCTTGCTGCTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: LGGWYRMGVELW*VIAFSHFLLLS Trigger: TGAAAGCAGCAAGAAGTGAGAGAAAGCAATAACTCACCAAAGCTCAACTCCCATCCTGTACCAGCCTCCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CCA 72 bp | GAAAGTCTCACAATTGAGTGGAGTCAGCAGCAGAGATaGACTTCCTCCCTGGTCTGTAAACCTGTGTGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: ESLTIEWSQQQR*TSSLVCKPVCK Trigger: TTTGCACACAGGTTTACAGACCAGGGAGGAAGTCCATCTCTGCTGCTGACTCCACTCAATTGTGAGACTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CCA 72 bp | GAATCAGTACTCTCAAGAGGGCTTGATCAAGGCGGCTaGATTCCACTGATGTCTCTATCAGATGTGGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: ESVLSRGLDQGG*IPLMSLSDVEE Trigger: CTCTTCCACATCTGATAGAGACATCAGTGGAATCCAGCCGCCTTGATCAAGCCCTCTTGAGAGTACTGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CCA 72 bp | AGGTACCTGGGAAAGGTGAATGGTATCTTACAAGTTTaGCACGCAAAGGCTGCACAGATCACAGAGGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: RYLGKVNGILQV*HAKAAQITEAL Trigger: CAAAGCCTCTGTGATCTGTGCAGCCTTTGCGTGCCAAACTTGTAAGATACCATTCACCTTTCCCAGGTACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CCA 72 bp | TCTTACTCGTCCTCAGTGGTAGTGAAATGCCCTTTGTaGATACCATCAGGTGAGGTAGGGAAGACATTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SYSSSVVVKCPL*IPSGEVGKTFQ Trigger: CTGGAATGTCTTCCCTACCTCACCTGATGGTATCCACAAAGGGCATTTCACTACCACTGAGGACGAGTAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGACTAGGACTCTTAAAGCAGAGTGAGAGGCCCCACCATCTGCAGGGCGAAAGCTTTGGTGAGTTATaGCTTTCTCTCACTTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LRLGLLKQSERPHHLQGESFGEL*LSLTSC Trigger: GCAAGAAGTGAGAGAAAGCAATAACTCACCAAAGCT...TTCGCCCTGCAGATGGTGGGGCCTCTCACTCTGCTTTAAGAGTCCTAGTCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTTGGTATCTTACAAGTTaGGCACGCAAAGGCTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: KVVTWGGLINVEDFLTRPWYLTS*ARKGCT Trigger: TGTGCAGCCTTTGCGTGCCAAACTTGTAAGATACCA...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTTCTTACCACTGTCATTaGAGGTGGAGATTGGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: KVVTWGGLINVEDFLTRPSYHCH*RWRLET Trigger: GGTCTCCAATCTCCACCTCAAATGACAGTGGTAAGA...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGTGCTGTCTTTCTCACTaGGTCAGACCACACAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: PISASDYLLRLGLLKQSECCLSH*VRPHSK Trigger: CTTGCTGTGTGGTCTGACCAAGTGAGAAAGACAGCA...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAATTATTTTCCTTTTGTTaGGAGTTCTGGAAGTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: DQTRSWKGLNSTLFLAFELFSFC*EFWKWP Trigger: TGGCCACTTCCAGAACTCCAAACAAAAGGAAAATAA...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGACTGTGTGTGATACTCCCCTTACGAGGTCTGATTTTGCTTGCTTTCCATTTTCTTACCACTGTCATTaGAGGTGGAGATTGGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: VTVCDTPLTRSDFACFPFSYHCH*RWRLET Trigger: GGTCTCCAATCTCCACCTCAAATGACAGTGGTAAGA...AAATGGAAAGCAAGCAAAATCAGACCTCGTAAGGGGAGTATCACACACAGTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTTTATTTTCCTTTTGTTaGGAGTTCTGGAAGTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: KVVTWGGLINVEDFLTRPLFSFC*EFWKWP Trigger: TGGCCACTTCCAGAACTCCAAACAAAAGGAAAATAA...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGGCAAGCTTTCCTGTTTaGGCTATCTTTCATGAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: PISASDYLLRLGLLKQSEASFPV*AIFHEG Trigger: ACCTTCATGAAAGATAGCCAAAACAGGAAAGCTTGC...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR TCA 72 bp | CTCACAAGCAAGCTTTCCTGTTTTGGCTATCTTTCATaGAGGTGTTCTAGCAACTTCAGGTGTCCATGCACT | + |
|
Preference number: 3 (lower is better) Translates to: LTSKLSCFGYLS*RCSSNFRCPCT Trigger: AGTGCATGGACACCTGAAGTTGCTAGAACACCTTCATGAAAGATAGCCAAAACAGGAAAGCTTGCTTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGACTGTGTGTGATACTCCCCTTACGAGGTCTGATTTTGCTTGCTTTCCATTTCAGATCACAGAGGCTTaGGAAAGAGAATGTGTACTA | + |
|
Preference number: 3 (lower is better) Translates to: VTVCDTPLTRSDFACFPFQITEA*ERECVL Trigger: TAGTACACATTCTCTTTCCAAAGCCTCTGTGATCTG...AAATGGAAAGCAAGCAAAATCAGACCTCGTAAGGGGAGTATCACACACAGTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CCA 72 bp | GGCGCTTTCTCATCATGTAGGATTTCTGGTGAAGTATaGAAGTTTCCCCACAAAAACTTCCAGATCAAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: GAFSSCRISGEV*KFPHKNFQIKY Trigger: GTACTTGATCTGGAAGTTTTTGTGGGGAAACTTCCATACTTCACCAGAAATCCTACATGATGAGAAAGCGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CCA 72 bp | GTTTCTCTAAAACACACACAATACATTAGAGTGAGGTaGTGTCATTCAGAACAGGGAGGAGTTGAAGTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VSLKHTQYIRVR*CHSEQGGVEVW Trigger: CCACACTTCAACTCCTCCCTGTTCTGAATGACACCACCTCACTCTAATGTATTGTGTGTGTTTTAGAGAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGACTGTGTGTGATACTCCCCTTACGAGGTCTGATTTTGCTTGCTTTCCATTTAAACCTTTCCCCTATTaGTCTTGGGTGCTAATAAGT | + |
|
Preference number: 3 (lower is better) Translates to: VTVCDTPLTRSDFACFPFKPFPY*SWVLIS Trigger: ACTTATTAGCACCCAAGACAAATAGGGGAAAGGTTT...AAATGGAAAGCAAGCAAAATCAGACCTCGTAAGGGGAGTATCACACACAGTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGTCCCGGCACAGCGCAGCCAGCCCCGGCATGAGGAACTGGCCCGCCATCCAGCTCGGTGCCTTTaGCGGCCCCGCGGCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPVPAQRSQPRHEELARHPARCL*RPRGTR Trigger: TCTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGG...ATGGCGGGCCAGTTCCTCATGCCGGGGCTGGCTGCGCTGTGCCGGGACTGGCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145038.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCCGGCACAGCGCAGCCAGCCCCGGCATGAGGAACTGGCCCGCCATGGCGGGTGGCCGAGGGGCTaGTCCAATTGCCCATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PVPAQRSQPRHEELARHGGWPRG*SNCPCH Trigger: GTGACATGGGCAATTGGACCAGCCCCTCGGCCACCC...GCCATGGCGGGCCAGTTCCTCATGCCGGGGCTGGCTGCGCTGTGCCGGGACTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145038.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCCGGCACAGCGCAGCCAGCCCCGGCATGAGGAACTGGCCCGCCATGGCCTTGCCTGGAGGGGATaGGAGGGGTGGTGTGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVPAQRSQPRHEELARHGLAWRG*EGWCVA Trigger: AGCGACACACCACCCCTCCCATCCCCTCCAGGCAAG...GCCATGGCGGGCCAGTTCCTCATGCCGGGGCTGGCTGCGCTGTGCCGGGACTGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145038.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCCCGGCACAGCGCAGCCAGCCCCGGCATGAGGAACTGGCCCGCCATGGCCTGCTGTTGCTTCGGTTaGTCGTGGTCCCCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSRHSAASPGMRNWPAMACCCFG*SWSPRR Trigger: CCTCCTGGGGGACCACGAGCAACCGAAGCAACAGCA...GGCCATGGCGGGCCAGTTCCTCATGCCGGGGCTGGCTGCGCTGTGCCGGGACTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145038.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCAGTCCCGGCACAGCGCAGCCAGCCCCGGCATGAGGAACTGGCCCGCCATAGTCGTTGTTCCCCTTaGCTGGAGGGGATGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPVPAQRSQPRHEELARHSRCSP*LEGMGG Trigger: CCCTCCCATCCCCTCCAGGCAAGGGGAACAACGACT...ATGGCGGGCCAGTTCCTCATGCCGGGGCTGGCTGCGCTGTGCCGGGACTGGCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145038.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCCAGCCCCGGCATGAGGAACTGGCCCGCCATGGCCACGAAGCTCGCCACCAGGGGATGGGAGGGGTaGTGTGTCGCTGCTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: AASPGMRNWPAMATKLATRGWEG*CVAAVA Trigger: AGCAACAGCAGCGACACACCACCCCTCCCATCCCCT...GGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCGGGGCTGGCTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000145038.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTCAGCCAGCCCCGGCATaGGGAACTGGCCCGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PASVAASLLIPDGLPLVAQPAPA*GTGPPW Trigger: CCATGGCGGGCCAGTTCCTCATGCCGGGGCTGGCTG...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTCCAGCTCGGTGCCTTTaGCGGCCCCGCGGCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PASVAASLLIPDGLPLVAPARCL*RPRGTR Trigger: TCTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGG...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | GCAGCCAGCCCCGGCATGAGGAACTGGCCCGCCATGGCCACGAAGCTCGCCACCTTGCTGACCACGTTTTaGATGAGACCAGTGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: AASPGMRNWPAMATKLATLLTTF*MRPVRM Trigger: CATCCGCACTGGTCTCATCCAAAACGTGGTCAGCAA...GGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCGGGGCTGGCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145038.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGCCATTGAGGAAGACATGAGGTGGACCGCCTCCAGGTGCTGTGGGCACCCCGGCATGAGGAACTaGCCCGCCATGGCCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QEAIEEDMRWTASRCCGHPGMRN*PAMATK Trigger: CTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCGGG...GTGCCCACAGCACCTGGAGGCGGTCCACCTCATGTCTTCCTCAATGGCTTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | GAGTGTCTGAGGCCTGGGTGCCTGCTGTCTTTCTCACTTGGTCAGACCACACAGAGCGCAGGCAGTGGCTaGATCTCCGCGCTGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: ECLRPGCLLSFSLGQTTQSAGSG*ISALLP Trigger: CGGCAGCAGCGCGGAGATCCAGCCACTGCCTGCGCT...CTGTGTGGTCTGACCAAGTGAGAAAGACAGCAGGCACCCAGGCCTCAGACACTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
||
| CDS-3UTR CCA 90 bp | CCAGGGAGGGGACTGGCCACTGCATTGGTCACTTACAGGGACTTCCTCAGAGTGGTGCAGCGCAGGCAGTaGCTGGATCTCCGCGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PGRGLATALVTYRDFLRVVQRRQ*LDLRAA Trigger: AGCAGCGCGGAGATCCAGCCACTGCCTGCGCTGCAC...CACTCTGAGGAAGTCCCTGTAAGTGACCAATGCAGTGGCCAGTCCCCTCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
||
| CDS-3UTR CCA 90 bp | CTGCCAGTCCCGGCACAGCGCAGCCAGCCCCGGCATGAGGAACTGGCCCGCCATAAGGAGTCCGAGAACTaGCTGAAGCCAATGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: LPVPAQRSQPRHEELARHKESEN*LKPMNS Trigger: ACTGTTCATTGGCTTCAGCCAGTTCTCGGACTCCTT...ATGGCGGGCCAGTTCCTCATGCCGGGGCTGGCTGCGCTGTGCCGGGACTGGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145038.8 |
||
| CDS-3UTR TCA 90 bp | AAGACACTGCCAGCAGTCTGCCTTCTGGTTGATGGTCCTCTGGCCCCTGCCTCAGTGCCGGGATCCAGGTaGGCACCACCAGGGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KTLPAVCLLVDGPLAPASVPGSR*APPGSS Trigger: AGAAGACCCTGGTGGTGCTCACCTGGATCCCGGCAC...TGAGGCAGGGGCCAGAGGACCATCAACCAGAAGGCAGACTGCTGGCAGTGTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
||
| CDS-3UTR CCA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTCCCGGCATGAGGAACTaGCCCGCCATGGCCACGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PASVAASLLIPDGLPLVAPGMRN*PAMATK Trigger: CTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCGGG...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACAGGGCCTGCAACACCTaGCAGTCCCGGCACAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHRACNT*QSRHSA Trigger: TGCGCTGTGCCGGGACTGGCAGGTGTTGCAGGCCCT...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | TTCTCAGATGTGTTCCTCGGATGTCTGGAAAGACAGAATTCCCCACACCGGTTGAGTGCGGGCCGCCGCTaGGGTGCAGCGCAGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FSDVFLGCLERQNSPHRLSAGRR*GAAQAV Trigger: CACTGCCTGCGCTGCACCCCAGCGGCGGCCCGCACT...CAACCGGTGTGGGGAATTCTGTCTTTCCAGACATCCGAGGAACACATCTGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
||
| CDS-3UTR CCA 90 bp | GAGTGTCTGAGGCCTGGGTGCCTGCTGTCTTTCTCACTTGGTCAGACCACACAGCTTGCCTGGAGGGGATaGGAGGGGTGGTGTGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ECLRPGCLLSFSLGQTTQLAWRG*EGWCVA Trigger: AGCGACACACCACCCCTCCCATCCCCTCCAGGCAAG...CTGTGTGGTCTGACCAAGTGAGAAAGACAGCAGGCACCCAGGCCTCAGACACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CAA 72 bp | GATGGTCCTCTGGCCCCTGCCTCAGTGGCAGCTTCTTaGCTAATCCCTGATGGGTTGCCTCTGGTCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: DGPLAPASVAAS*LIPDGLPLVAA Trigger: TGCAGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGGGGCCAGAGGACCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR TCA 90 bp | ATGAGGAACTGGCCCGCCATGGCCACGAAGCTCGCCACCATGGTAATTATGAACGTGCCGGGATCCAGGTaGGCACCACCAGGGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: MRNWPAMATKLATMVIMNVPGSR*APPGSS Trigger: AGAAGACCCTGGTGGTGCTCACCTGGATCCCGGCAC...GTTCATAATTACCATGGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCCTCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145038.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTAGTCGTTGTTCCCCTTaGCTGGAGGGGATGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PASVAASLLIPDGLPLVASRCSP*LEGMGG Trigger: CCCTCCCATCCCCTCCAGGCAAGGGGAACAACGACT...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | CCAGGGAGGGGACTGGCCACTGCATTGGTCACTTACAGGGACTTCCTCAGAGTGCCACCACCTTCACGATaGACACCTTCTTGGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGRGLATALVTYRDFLRVPPPSR*TPSWAS Trigger: GGAGGCCCAAGAAGGTGTGCATCGTGAAGGTGGTGG...CACTCTGAGGAAGTCCCTGTAAGTGACCAATGCAGTGGCCAGTCCCCTCCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR TCA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTCAGCCAGCCCCGGCATaGGGAACTGGCCCGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: KVVTWGGLINVEDFLTRPQPAPA*GTGPPW Trigger: CCATGGCGGGCCAGTTCCTCATGCCGGGGCTGGCTG...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGCCATTGAGGAAGACATGAGGTGGACCGCCTCCAGGTGCTGTGGGCACCTGGCATCACTCCCTTaGTATCACTCTCAGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QEAIEEDMRWTASRCCGHLASLP*YHSQGS Trigger: TGAGCCCTGAGAGTGATATCAAGGGAGTGATGCCAG...GTGCCCACAGCACCTGGAGGCGGTCCACCTCATGTCTTCCTCAATGGCTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTCCAGCTCGGTGCCTTTaGCGGCCCCGCGGCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KVVTWGGLINVEDFLTRPPARCL*RPRGTR Trigger: TCTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGG...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTCCACCACCTTCACGATaGACACCTTCTTGGGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PASVAASLLIPDGLPLVAPPPSR*TPSWAS Trigger: GGAGGCCCAAGAAGGTGTGCATCGTGAAGGTGGTGG...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACCAGCATGCCAAAACCTaGACTGGCCAGCACCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHQHAKT*TGQHQP Trigger: GGGCTGGTGCTGGCCAGTGCAGGTTTTGGCATGCTG...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGCCATTGAGGAAGACATGAGGTGGACCGCCTCCAGGTGCTGTGGGCACCTTCTTGCAAAGCAGTaGTGGATCCCGTACCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QEAIEEDMRWTASRCCGHLLAKQ*WIPYPV Trigger: GACAGGGTACGGGATCCACCACTGCTTTGCAAGAAG...GTGCCCACAGCACCTGGAGGCGGTCCACCTCATGTCTTCCTCAATGGCTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTCTCTCCCTTCTTGTGTaGCAGCAGCGGTTGCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PASVAASLLIPDGLPLVALSLLV*QQRLPC Trigger: ACACGGCAACCGCTGCTGCCACACAAGAAGGGAGAG...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR TCA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTGCTGTCACTCATCCCTaGGTCTGGATGCTGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PASVAASLLIPDGLPLVAAVTHP*VWMLAV Trigger: TACAGCCAGCATCCAGACTCAGGGATGAGTGACAGC...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACGTGAGCAGCAAGGGCTaGTCTCCCTTCTTGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHVSSKG*SPFLCG Trigger: GCCACACAAGAAGGGAGAGCAGCCCTTGCTGCTCAC...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | ACTCAGGACCCCAGGCATCAAAGAGAACATAGGCCAGCTGCCAGAAACAGGGTTAGGGGATGGGAGGGGTaGTGTGTCGCTGCTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQDPRHQREHRPAARNRVRGWEG*CVAAVA Trigger: AGCAACAGCAGCGACACACCACCCCTCCCATCCCCT...AACCCTGTTTCTGGCAGCTGGCCTATGTTCTCTTTGATGCCTGGGGTCCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTCTTGCAAAGCAGTGGTaGATCCCGTACCCTGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PASVAASLLIPDGLPLVALAKQW*IPYPVS Trigger: GCTGACAGGGTACGGGATCCACCACTGCTTTGCAAG...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | CCAGGGAGGGGACTGGCCACTGCATTGGTCACTTACAGGGACTTCCTCAGAGTGGTGCGATGCTGGCCATaGTGTAGTAGTCAGCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGRGLATALVTYRDFLRVVRCWP*CSSQRR Trigger: TCTACGCTGACTACTACACCATGGCCAGCATCGCAC...CACTCTGAGGAAGTCCCTGTAAGTGACCAATGCAGTGGCCAGTCCCCTCCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | TTAAGACTAGGACTCTTAAAGCAGAGTGAGAGGCCCCACCATCTGCAGGGCGAATGCCAAAACCTGCACTaGCCAGCACCAGCCCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRLGLLKQSERPHHLQGECQNLH*PAPARA Trigger: GGCTCGGGCTGGTGCTGGCCAGTGCAGGTTTTGGCA...TTCGCCCTGCAGATGGTGGGGCCTCTCACTCTGCTTTAAGAGTCCTAGTCTTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CAA 72 bp | ACAGATGACCTCTGTCTCCTTGAGTGGAGAAGGAAATaGAGTCTGGCCTCCAGGGAGGGGACTGGCCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: TDDLCLLEWRRK*SLASREGTGHC Trigger: GCAGTGGCCAGTCCCCTCCCTGGAGGCCAGACTCAATTTCCTTCTCCACTCAAGGAGACAGAGGTCATCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | ATGAGGAACTGGCCCGCCATGGCCACGAAGCTCGCCACCATGGTAATTATGAACGAAGCCAATGAACAGTaGCGGGATCCAGGTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MRNWPAMATKLATMVIMNEANEQ*RDPGEH Trigger: GTGCTCACCTGGATCCCGGCACTGTTCATTGGCTTC...GTTCATAATTACCATGGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCCTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145038.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGACTAGGACTCTTAAAGCAGAGTGAGAGGCCCCACCATCTGCAGGGCGAATGCTGTTGCTTCGGTTaGTCGTGGTCCCCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRLGLLKQSERPHHLQGECCCFG*SWSPRR Trigger: CCTCCTGGGGGACCACGAGCAACCGAAGCAACAGCA...TTCGCCCTGCAGATGGTGGGGCCTCTCACTCTGCTTTAAGAGTCCTAGTCTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | TTAAGACTAGGACTCTTAAAGCAGAGTGAGAGGCCCCACCATCTGCAGGGCGAACAGATGATGAGGGCCTaGAACACCTGCCAGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LRLGLLKQSERPHHLQGEQMMRA*NTCQSR Trigger: CCGGGACTGGCAGGTGTTGCAGGCCCTCATCATCTG...TTCGCCCTGCAGATGGTGGGGCCTCTCACTCTGCTTTAAGAGTCCTAGTCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCACTTGGTCAGACCACACAGCAAGCTGGCTCACAAGCAAGCTTTCCTGCAGATGATGAGGGCCTaGAACACCTGCCAGTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LSHLVRPHSKLAHKQAFLQMMRA*NTCQSR Trigger: CCGGGACTGGCAGGTGTTGCAGGCCCTCATCATCTG...CAGGAAAGCTTGCTTGTGAGCCAGCTTGCTGTGTGGTCTGACCAAGTGAGAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTGCCCATCATGCTTCTTaGAAAGCAGTGGTGGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PASVAASLLIPDGLPLVAAHHAS*KAVVDP Trigger: GGGATCCACCACTGCTTTGCAAGAAGCATGATGGGC...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACCCCCACCGCATGGGATaGAAACATTCCCACGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHPHRMG*KHSHDG Trigger: TCCATCGTGGGAATGTTTGCATCCCATGCGGTGGGG...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | ACTCAGGACCCCAGGCATCAAAGAGAACATAGGCCAGCTGCCAGAAACAGGGTTTGGGCGCTGTCAGCATaGCAAAACCTGCACTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQDPRHQREHRPAARNRVWALSA*QNLHWP Trigger: TGGCCAGTGCAGGTTTTGGCATGCTGACAGCGCCCA...AACCCTGTTTCTGGCAGCTGGCCTATGTTCTCTTTGATGCCTGGGGTCCTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | AAGACACTGCCAGCAGTCTGCCTTCTGGTTGATGGTCCTCTGGCCCCTGCCTCAATCCCTGAGTCTGGATaGTGGCTGTATTTGCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: KTLPAVCLLVDGPLAPASIPESG*WLYLPI Trigger: GATCGGCAAATACAGCCAGCATCCAGACTCAGGGAT...TGAGGCAGGGGCCAGAGGACCATCAACCAGAAGGCAGACTGCTGGCAGTGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | AAGACACTGCCAGCAGTCTGCCTTCTGGTTGATGGTCCTCTGGCCCCTGCCTCATTGCTGACCACGTTTTaGATGAGACCAGTGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: KTLPAVCLLVDGPLAPASLLTTF*MRPVRM Trigger: CATCCGCACTGGTCTCATCCAAAACGTGGTCAGCAA...TGAGGCAGGGGCCAGAGGACCATCAACCAGAAGGCAGACTGCTGGCAGTGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | ATGTCAGAGTGGCAGCCATCCAAGCTGGAGCTCTCTATGGTATGTGCTGGAGACAGGCTCCCCACCGCATaGGATGCAAACATTCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: MSEWQPSKLELSMVCAGDRLPTA*DANIPT Trigger: CGTGGGAATGTTTGCATCCCATGCGGTGGGGAGCCT...GTCTCCAGCACATACCATAGAGAGCTCCAGCTTGGATGGCTGCCACTCTGACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | AAGACACTGCCAGCAGTCTGCCTTCTGGTTGATGGTCCTCTGGCCCCTGCCTCATGTAGTGTTCCCCGTTaGCGATATTCTCAGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KTLPAVCLLVDGPLAPASCSVPR*RYSQAG Trigger: ACCTGCCTGAGAATATCGCCAACGGGGAACACTACA...TGAGGCAGGGGCCAGAGGACCATCAACCAGAAGGCAGACTGCTGGCAGTGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR TCA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACTGCAGCAGGCGAAGATaGTATGGTGCAGGAAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHCSRRR*YGAGSS Trigger: GCTACTTCCTGCACCATATCATCTTCGCCTGCTGCA...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | TTCTCAGATGTGTTCCTCGGATGTCTGGAAAGACAGAATTCCCCACACCGGTTGTGCTGTTGCTTCGGTTaGTCGTGGTCCCCCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FSDVFLGCLERQNSPHRLCCCFG*SWSPRR Trigger: CCTCCTGGGGGACCACGAGCAACCGAAGCAACAGCA...CAACCGGTGTGGGGAATTCTGTCTTTCCAGACATCCGAGGAACACATCTGAGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGAGGGTTATTTCCAGAGCATCTGGTTTCTCAGATGTGTTCCTCGGATGAGGGCCTGCAACACCTaGCAGTCCCGGCACAGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSEGYFQSIWFLRCVPRMRACNT*QSRHSA Trigger: TGCGCTGTGCCGGGACTGGCAGGTGTTGCAGGCCCT...CATCCGAGGAACACATCTGAGAAACCAGATGCTCTGGAAATAACCCTCTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCACTTGGTCAGACCACACAGCAAGCTGGCTCACAAGCAAGCTTTCCTGTGGGCGCTGTCAGCATaGCAAAACCTGCACTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSHLVRPHSKLAHKQAFLWALSA*QNLHWP Trigger: TGGCCAGTGCAGGTTTTGGCATGCTGACAGCGCCCA...CAGGAAAGCTTGCTTGTGAGCCAGCTTGCTGTGTGGTCTGACCAAGTGAGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAAAGGGGATGGGAGGGGTaGTGTGTCGCTGCTGTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DQTRSWKGLNSTLFLAFERGWEG*CVAAVA Trigger: AGCAACAGCAGCGACACACCACCCCTCCCATCCCCT...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGGGAACTGGCCCGCCATaGCCACGAAGCTCGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: PISASDYLLRLGLLKQSEGTGPP*PRSSPP Trigger: TGGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCC...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | TCTTCAGAGGGTTATTTCCAGAGCATCTGGTTTCTCAGATGTGTTCCTCGGATGGGAACTGGCCCGCCATaGCCACGAAGCTCGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSEGYFQSIWFLRCVPRMGTGPP*PRSSPP Trigger: TGGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCC...CATCCGAGGAACACATCTGAGAAACCAGATGCTCTGGAAATAACCCTCTGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR TCA 90 bp | CTTTCTCACTTGGTCAGACCACACAGCAAGCTGGCTCACAAGCAAGCTTTCCTGCTTCTTGGGCCTCCGTaGAAGCTCTTTCTCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSHLVRPHSKLAHKQAFLLLGPP*KLFLEL Trigger: GAGCTCGAGAAAGAGCTTTCACGGAGGCCCAAGAAG...CAGGAAAGCTTGCTTGTGAGCCAGCTTGCTGTGTGGTCTGACCAAGTGAGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR TCA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTCACAGAAGAAGACACTaGGGCTCCCCACCGCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: KVVTWGGLINVEDFLTRPHRRRH*GSPPHG Trigger: CCCATGCGGTGGGGAGCCTCAGTGTCTTCTTCTGTG...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTAGTCGTTGTTCCCCTTaGCTGGAGGGGATGGGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KVVTWGGLINVEDFLTRPSRCSP*LEGMGG Trigger: CCCTCCCATCCCCTCCAGGCAAGGGGAACAACGACT...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | CTTTCTCACTTGGTCAGACCACACAGCAAGCTGGCTCACAAGCAAGCTTTCCTGCCCCACCGCATGGGATaGAAACATTCCCACGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSHLVRPHSKLAHKQAFLPHRMG*KHSHDG Trigger: TCCATCGTGGGAATGTTTGCATCCCATGCGGTGGGG...CAGGAAAGCTTGCTTGTGAGCCAGCTTGCTGTGTGGTCTGACCAAGTGAGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGGGGTGGCCGAGGGGCTaGTCCAATTGCCCATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PISASDYLLRLGLLKQSEGWPRG*SNCPCH Trigger: GTGACATGGGCAATTGGACCAGCCCCTCGGCCACCC...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTGCTGATTCAAATTGCTaGGTAGCCATTAGCCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: PASVAASLLIPDGLPLVAADSNC*VAISHR Trigger: CCGATGGCTAATGGCTACCCAGCAATTTGAATCAGC...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | TTAAGACTAGGACTCTTAAAGCAGAGTGAGAGGCCCCACCATCTGCAGGGCGAACTTGCAAAGCAGTGGTaGATCCCGTACCCTGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LRLGLLKQSERPHHLQGELAKQW*IPYPVS Trigger: GCTGACAGGGTACGGGATCCACCACTGCTTTGCAAG...TTCGCCCTGCAGATGGTGGGGCCTCTCACTCTGCTTTAAGAGTCCTAGTCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | TCTTCAGAGGGTTATTTCCAGAGCATCTGGTTTCTCAGATGTGTTCCTCGGATGTGCCAAAACCTGCACTaGCCAGCACCAGCCCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSEGYFQSIWFLRCVPRMCQNLH*PAPARA Trigger: GGCTCGGGCTGGTGCTGGCCAGTGCAGGTTTTGGCA...CATCCGAGGAACACATCTGAGAAACCAGATGCTCTGGAAATAACCCTCTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAACTCTCCCTTCTTGTGTaGCAGCAGCGGTTGCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: DQTRSWKGLNSTLFLAFELSLLV*QQRLPC Trigger: ACACGGCAACCGCTGCTGCCACACAAGAAGGGAGAG...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR TCA 90 bp | GAGTGTCTGAGGCCTGGGTGCCTGCTGTCTTTCTCACTTGGTCAGACCACACAGCTCACACAGTTCTTCTaGGTAAGGTACAGGATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: ECLRPGCLLSFSLGQTTQLTQFF*VRYRIN Trigger: GTTGATCCTGTACCTTACTCAGAAGAACTGTGTGAG...CTGTGTGGTCTGACCAAGTGAGAAAGACAGCAGGCACCCAGGCCTCAGACACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR TCA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTCTCACACAGTTCTTCTaGGTAAGGTACAGGATCAAC | + |
|
Preference number: 4 (lower is better) Translates to: PASVAASLLIPDGLPLVALTQFF*VRYRIN Trigger: GTTGATCCTGTACCTTACTCAGAAGAACTGTGTGAG...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR TCA 90 bp | ACTCAGGACCCCAGGCATCAAAGAGAACATAGGCCAGCTGCCAGAAACAGGGTTCTTCAGCTGCAATTCTaGGTCTGGATGCTGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: TQDPRHQREHRPAARNRVLQLQF*VWMLAV Trigger: TACAGCCAGCATCCAGACTCAGAATTGCAGCTGAAG...AACCCTGTTTCTGGCAGCTGGCCTATGTTCTCTTTGATGCCTGGGGTCCTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
||
| CDS-3UTR TCA 90 bp | CTTTCTCACTTGGTCAGACCACACAGCAAGCTGGCTCACAAGCAAGCTTTCCTGTGGAGAACTTGTCCTTaGCGCTGTCACTCATCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LSHLVRPHSKLAHKQAFLWRTCP*RCHSSL Trigger: CAGGGATGAGTGACAGCGTCAAGGACAAGTTCTCCA...CAGGAAAGCTTGCTTGTGAGCCAGCTTGCTGTGTGGTCTGACCAAGTGAGAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | TTCTCAGATGTGTTCCTCGGATGTCTGGAAAGACAGAATTCCCCACACCGGTTGGAAGCCAATGAACAGTaGCGGGATCCAGGTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: FSDVFLGCLERQNSPHRLEANEQ*RDPGEH Trigger: GTGCTCACCTGGATCCCGGCACTGTTCATTGGCTTC...CAACCGGTGTGGGGAATTCTGTCTTTCCAGACATCCGAGGAACACATCTGAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
||
| CDS-3UTR GCA 90 bp | GAGTGTCTGAGGCCTGGGTGCCTGCTGTCTTTCTCACTTGGTCAGACCACACAGCAACCCAGTCAGCAATaGATCCAGTTATTAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ECLRPGCLLSFSLGQTTQQPSQQ*IQLLGS Trigger: GCTACCTAATAACTGGATGCATTGCTGACTGGGTTG...CTGTGTGGTCTGACCAAGTGAGAAAGACAGCAGGCACCCAGGCCTCAGACACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTCAACCCAGTCAGCAATaGATCCAGTTATTAGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: PASVAASLLIPDGLPLVAQPSQQ*IQLLGS Trigger: GCTACCTAATAACTGGATGCATTGCTGACTGGGTTG...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGAGGGTTATTTCCAGAGCATCTGGTTTCTCAGATGTGTTCCTCGGATGCAGCATGCCAAAACCTaGACTGGCCAGCACCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSEGYFQSIWFLRCVPRMQHAKT*TGQHQP Trigger: GGGCTGGTGCTGGCCAGTGCAGGTTTTGGCATGCTG...CATCCGAGGAACACATCTGAGAAACCAGATGCTCTGGAAATAACCCTCTGAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR TCA 90 bp | TTCTCAGATGTGTTCCTCGGATGTCTGGAAAGACAGAATTCCCCACACCGGTTGCTGGCATCACTCCCTTaGTATCACTCTCAGGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FSDVFLGCLERQNSPHRLLASLP*YHSQGS Trigger: TGAGCCCTGAGAGTGATATCAAGGGAGTGATGCCAG...CAACCGGTGTGGGGAATTCTGTCTTTCCAGACATCCGAGGAACACATCTGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR TCA 90 bp | TTAAGACTAGGACTCTTAAAGCAGAGTGAGAGGCCCCACCATCTGCAGGGCGAATGGAGAACTTGTCCTTaGCGCTGTCACTCATCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LRLGLLKQSERPHHLQGEWRTCP*RCHSSL Trigger: TAGGGATGAGTGACAGCGTCAAGGACAAGTTCTCCA...TTCGCCCTGCAGATGGTGGGGCCTCTCACTCTGCTTTAAGAGTCCTAGTCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
||
| CDS-3UTR TCA 90 bp | GTGACTGTGTGTGATACTCCCCTTACGAGGTCTGATTTTGCTTGCTTTCCATTTCACAGAAGAAGACACTaGGGCTCCCCACCGCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTVCDTPLTRSDFACFPFHRRRH*GSPPHG Trigger: CCCATGCGGTGGGGAGCCTCAGTGTCTTCTTCTGTG...AAATGGAAAGCAAGCAAAATCAGACCTCGTAAGGGGAGTATCACACACAGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR TCA 90 bp | TTCTCAGATGTGTTCCTCGGATGTCTGGAAAGACAGAATTCCCCACACCGGTTGTGCAGCAGGCGAAGATaGTATGGTGCAGGAAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSDVFLGCLERQNSPHRLCSRRR*YGAGSS Trigger: GCTACTTCCTGCACCATATCATCTTCGCCTGCTGCA...CAACCGGTGTGGGGAATTCTGTCTTTCCAGACATCCGAGGAACACATCTGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAAGCCCATCATGCTTCTTaGAAAGCAGTGGTGGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: DQTRSWKGLNSTLFLAFEAHHAS*KAVVDP Trigger: GGGATCCACCACTGCTTTGCAAGAAGCATGATGGGC...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | ATGTCAGAGTGGCAGCCATCCAAGCTGGAGCTCTCTATGGTATGTGCTGGAGACTGTGGGAGTGATCTCTaGACAGAAGAAGACACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MSEWQPSKLELSMVCAGDCGSDL*TEEDTE Trigger: CTCAGTGTCTTCTTCTGTGCAGAGATCACTCCCACA...GTCTCCAGCACATACCATAGAGAGCTCCAGCTTGGATGGCTGCCACTCTGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAACTTCTTGCAAAGCAGTaGTGGATCCCGTACCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DQTRSWKGLNSTLFLAFELLAKQ*WIPYPV Trigger: GACAGGGTACGGGATCCACCACTGCTTTGCAAGAAG...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | TTCTCAGATGTGTTCCTCGGATGTCTGGAAAGACAGAATTCCCCACACCGGTTGGTGCGATGCTGGCCATaGTGTAGTAGTCAGCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSDVFLGCLERQNSPHRLVRCWP*CSSQRR Trigger: TCTACGCTGACTACTACACCATGGCCAGCATCGCAC...CAACCGGTGTGGGGAATTCTGTCTTTCCAGACATCCGAGGAACACATCTGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGAGGCTCCCCACCGCATaGGATGCAAACATTCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: PISASDYLLRLGLLKQSERLPTA*DANIPT Trigger: CGTGGGAATGTTTGCATCCCATGCGGTGGGGAGCCT...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | GTGACTGTGTGTGATACTCCCCTTACGAGGTCTGATTTTGCTTGCTTTCCATTTGTGAGCAGCAAGGGCTaGTCTCCCTTCTTGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTVCDTPLTRSDFACFPFVSSKG*SPFLCG Trigger: GCCACACAAGAAGGGAGAGCAGCCCTTGCTGCTCAC...AAATGGAAAGCAAGCAAAATCAGACCTCGTAAGGGGAGTATCACACACAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAATTGCTGACCACGTTTTaGATGAGACCAGTGCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: DQTRSWKGLNSTLFLAFELLTTF*MRPVRM Trigger: CATCCGCACTGGTCTCATCCAAAACGTGGTCAGCAA...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTTTCTCAGGCAGGTTCTaGTTCCTGCTCTCAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KVVTWGGLINVEDFLTRPFSGRF*FLLSGS Trigger: GCTTCCTGAGAGCAGGAACCAGAACCTGCCTGAGAA...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CAA 72 bp | CTCGGATGTCTGGAAAGACAGAATTCCCCACACCGGTaGAAAGTCTCACAATTGAGTGGAGTCAGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGCLERQNSPHR*KVSQLSGVSSR Trigger: TCTGCTGCTGACTCCACTCAATTGTGAGACTTTCAACCGGTGTGGGGAATTCTGTCTTTCCAGACATCCGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| 3UTR CAA 72 bp | GCAGCTGTGAATGACAGTTCAGAGCTCAACATAAACTaGTGCTGTGAACAGGTACCGCCCCCTTCAACACGT | + |
|
Preference number: 4 (lower is better) Translates to: AAVNDSSELNIN*CCEQVPPPSTR Trigger: ACGTGTTGAAGGGGGCGGTACCTGTTCACAGCACAAGTTTATGTTGAGCTCTGAACTGTCATTCACAGCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR TCA 90 bp | ATGTCAGAGTGGCAGCCATCCAAGCTGGAGCTCTCTATGGTATGTGCTGGAGACGATCAACTTCTTTGCTaGTTCAAATTGCTGGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: MSEWQPSKLELSMVCAGDDQLLC*FKLLGS Trigger: GCTACCCAGCAATTTGAATCAGCAAAGAAGTTGATC...GTCTCCAGCACATACCATAGAGAGCTCCAGCTTGGATGGCTGCCACTCTGACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR TCA 90 bp | GTGACTGTGTGTGATACTCCCCTTACGAGGTCTGATTTTGCTTGCTTTCCATTTCTTCTTGGGCCTCCGTaGAAGCTCTTTCTCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTVCDTPLTRSDFACFPFLLGPP*KLFLEL Trigger: GAGCTCGAGAAAGAGCTTTCACGGAGGCCCAAGAAG...AAATGGAAAGCAAGCAAAATCAGACCTCGTAAGGGGAGTATCACACACAGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | ACTCAACCCTTTTTCTGGCCTTTGAATTCTAGCAACTGTCATTTAGAAGTCACTGGGTGGCCGAGGGGCTaGTCCAATTGCCCATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TQPFFWPLNSSNCHLEVTGWPRG*SNCPCH Trigger: GTGACATGGGCAATTGGACCAGCCCCTCGGCCACCC...AGTGACTTCTAAATGACAGTTGCTAGAATTCAAAGGCCAGAAAAAGGGTTGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CCA 90 bp | ACTCAACCCTTTTTCTGGCCTTTGAATTCTAGCAACTGTCATTTAGAAGTCACTCTTGCCTGGAGGGGATaGGAGGGGTGGTGTGTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQPFFWPLNSSNCHLEVTLAWRG*EGWCVA Trigger: AGCGACACACCACCCCTCCCATCCCCTCCAGGCAAG...AGTGACTTCTAAATGACAGTTGCTAGAATTCAAAGGCCAGAAAAAGGGTTGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CCA 90 bp | TTCTCAGATGTGTTCCTCGGATGTCTGGAAAGACAGAATTCCCCACACCGGTTGGCTGATTCAAATTGCTaGGTAGCCATTAGCCATCGG | + |
|
Preference number: 4 (lower is better) Translates to: FSDVFLGCLERQNSPHRLADSNC*VAISHR Trigger: CCGATGGCTAATGGCTACCCAGCAATTTGAATCAGC...CAACCGGTGTGGGGAATTCTGTCTTTCCAGACATCCGAGGAACACATCTGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CCA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAACTCTTTCTCGAGCTCTaGCATCACTCCCTTGATATC | + |
|
Preference number: 4 (lower is better) Translates to: DQTRSWKGLNSTLFLAFELFLEL*HHSLDI Trigger: GATATCAAGGGAGTGATGCCAGAGCTCGAGAAAGAG...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CCA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTTGTAGTGTTCCCCGTTaGCGATATTCTCAGGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KVVTWGGLINVEDFLTRPCSVPR*RYSQAG Trigger: ACCTGCCTGAGAATATCGCCAACGGGGAACACTACA...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CAA 72 bp | GTTTGGCACGCAAAGGCTGCACAGATCACAGAGGCTTaGGAAAGAGAATGTGTACTAACCTCAAGGCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: VWHAKAAQITEA*ERECVLTSRHG Trigger: TCCATGCCTTGAGGTTAGTACACATTCTCTTTCCAAAGCCTCTGTGATCTGTGCAGCCTTTGCGTGCCAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CAA 72 bp | CTTTCCTCCCAGAATCACAGTGTAGATAGTCATTCCTaGTCCTCTCTAGGAATCCTCAGGCCACGGATTAGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSQNHSVDSHS*SSLGILRPRIS Trigger: GCTAATCCGTGGCCTGAGGATTCCTAGAGAGGACAAGGAATGACTATCTACACTGTGATTCTGGGAGGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR GCA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTCTTCATGGCCCATCATaGTTCTTGCAAAGCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KVVTWGGLINVEDFLTRPLHGPS*FLQSSG Trigger: ACCACTGCTTTGCAAGAAGCATGATGGGCCATGAAG...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR GCA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGACGGCCAACTTCAGCTaGAATTCTGAGTCTGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PISASDYLLRLGLLKQSETANFS*NSESGC Trigger: GCATCCAGACTCAGAATTGCAGCTGAAGTTGGCCGT...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
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| CDS-3UTR CCA 90 bp | TCTTCAGAGGGTTATTTCCAGAGCATCTGGTTTCTCAGATGTGTTCCTCGGATGGGCACCTTCACTTCATaGCCCATCATGCTTCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSEGYFQSIWFLRCVPRMGTFTS*PIMLLA Trigger: TGCAAGAAGCATGATGGGCCATGAAGTGAAGGTGCC...CATCCGAGGAACACATCTGAGAAACCAGATGCTCTGGAAATAACCCTCTGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CCA 90 bp | TTAAGACTAGGACTCTTAAAGCAGAGTGAGAGGCCCCACCATCTGCAGGGCGAACAAACATTCCCACGATaGAAAACGCAATGGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: LRLGLLKQSERPHHLQGEQTFPR*KTQWRT Trigger: AGTTCTCCATTGCGTTTTCCATCGTGGGAATGTTTG...TTCGCCCTGCAGATGGTGGGGCCTCTCACTCTGCTTTAAGAGTCCTAGTCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CCA 90 bp | GTGACTGTGTGTGATACTCCCCTTACGAGGTCTGATTTTGCTTGCTTTCCATTTTTCTCAGGCAGGTTCTaGTTCCTGCTCTCAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTVCDTPLTRSDFACFPFFSGRF*FLLSGS Trigger: GCTTCCTGAGAGCAGGAACCAGAACCTGCCTGAGAA...AAATGGAAAGCAAGCAAAATCAGACCTCGTAAGGGGAGTATCACACACAGTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR GCA 90 bp | CTTTCTCACTTGGTCAGACCACACAGCAAGCTGGCTCACAAGCAAGCTTTCCTGTTTGCTGATTCAAATTaGTGGGTAGCCATTAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSHLVRPHSKLAHKQAFLFADSN*WVAISH Trigger: ATGGCTAATGGCTACCCAGCAATTTGAATCAGCAAA...CAGGAAAGCTTGCTTGTGAGCCAGCTTGCTGTGTGGTCTGACCAAGTGAGAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR GCA 90 bp | TCTTCAGAGGGTTATTTCCAGAGCATCTGGTTTCTCAGATGTGTTCCTCGGATGCTTCATGGCCCATCATaGTTCTTGCAAAGCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSEGYFQSIWFLRCVPRMLHGPS*FLQSSG Trigger: ACCACTGCTTTGCAAGAAGCATGATGGGCCATGAAG...CATCCGAGGAACACATCTGAGAAACCAGATGCTCTGGAAATAACCCTCTGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CCA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGAAGGAGTCCGAGAACTaGCTGAAGCCAATGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PISASDYLLRLGLLKQSEKESEN*LKPMNS Trigger: ACTGTTCATTGGCTTCAGCCAGTTCTCGGACTCCTT...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
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| CDS-3UTR CCA 90 bp | TCTTCAGAGGGTTATTTCCAGAGCATCTGGTTTCTCAGATGTGTTCCTCGGATGCTCTTTCTCGAGCTCTaGCATCACTCCCTTGATATC | + |
|
Preference number: 4 (lower is better) Translates to: SSEGYFQSIWFLRCVPRMLFLEL*HHSLDI Trigger: GATATCAAGGGAGTGATGCCAGAGCTCGAGAAAGAG...CATCCGAGGAACACATCTGAGAAACCAGATGCTCTGGAAATAACCCTCTGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR GCA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAATTTGCTGATTCAAATTaGTGGGTAGCCATTAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: DQTRSWKGLNSTLFLAFEFADSN*WVAISH Trigger: ATGGCTAATGGCTACCCAGCAATTTGAATCAGCAAA...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CCA 90 bp | AAAGTAGTGACGTGGGGAGGTCTGATCAACGTGGAGGATTTTCTTACTCGTCCTCAAACATTCCCACGATaGAAAACGCAATGGAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KVVTWGGLINVEDFLTRPQTFPR*KTQWRT Trigger: AGTTCTCCATTGCGTTTTCCATCGTGGGAATGTTTG...AGGACGAGTAAGAAAATCCTCCACGTTGATCAGACCTCCCCACGTCACTACTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CAA 72 bp | TTTTCTTACTCGTCCTCAGTGGTAGTGAAATGCCCTTaGTGGATACCATCAGGTGAGGTAGGGAAGACATTC | + |
|
Preference number: 4 (lower is better) Translates to: FSYSSSVVVKCP*WIPSGEVGKTF Trigger: GAATGTCTTCCCTACCTCACCTGATGGTATCCACAAAGGGCATTTCACTACCACTGAGGACGAGTAAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CCA 90 bp | TTCTCAGATGTGTTCCTCGGATGTCTGGAAAGACAGAATTCCCCACACCGGTTGGAGAACTTAGCGATATaGACTTTCCAGGTATTATCA | + |
|
Preference number: 4 (lower is better) Translates to: FSDVFLGCLERQNSPHRLENLAI*TFQVLS Trigger: TGATAATACCTGGAAAGTCCATATCGCTAAGTTCTC...CAACCGGTGTGGGGAATTCTGTCTTTCCAGACATCCGAGGAACACATCTGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CCA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAAGAGAACTTAGCGATATaGACTTTCCAGGTATTATCA | + |
|
Preference number: 4 (lower is better) Translates to: DQTRSWKGLNSTLFLAFEENLAI*TFQVLS Trigger: TGATAATACCTGGAAAGTCCATATCGCTAAGTTCTC...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| 3UTR CAA 72 bp | ACACAGCAAGCTGGCTCACAAGCAAGCTTTCCTGTTTaGGCTATCTTTCATGAAGGTGTTCTAGCAACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TQQAGSQASFPV*AIFHEGVLATS Trigger: TGAAGTTGCTAGAACACCTTCATGAAAGATAGCCAAAACAGGAAAGCTTGCTTGTGAGCCAGCTTGCTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR GCA 90 bp | ACTCAACCCTTTTTCTGGCCTTTGAATTCTAGCAACTGTCATTTAGAAGTCACTAATTCTGAGTCTGGATaGTGGCTGTATTTGCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: TQPFFWPLNSSNCHLEVTNSESG*WLYLPI Trigger: GATCGGCAAATACAGCCAGCATCCAGACTCAGAATT...AGTGACTTCTAAATGACAGTTGCTAGAATTCAAAGGCCAGAAAAAGGGTTGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
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| CDS GCA 90 bp | GCGTCCCCGGGCGGCAGGGAGCCGTTCTCCTCCGCCGGGGCCGGCTaGCGCCCGGCACCACTACCCGCCGCCTCACGCCGCCGGTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: ASPGGREPFSSAGAG*RPAPLPAASRRRSI Trigger: GATAGACCGGCGGCGTGAGGCGGCGGGTAGTGGTGCCGGGCGGCAGCCGGCCCCGGCGGAGGAGAACGGCTCCCTGCCGCCCGGGGACGC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
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| CDS CCA 90 bp | CAGCTCGAGTGCGGGCCGCCGCTGGGGTGCAGCGCAGGCAGTGGCTaGATCTCCGCGCTGCTGCCGGAGCCCGCGCGCCCTCCGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: QLECGPPLGCSAGSG*ISALLPEPARPPRG Trigger: GCCCCTCGGAGGGCGCGCGGGCTCCGGCAGCAGCGCGGAGATCCAGCCACTGCCTGCGCTGCACCCCAGCGGCGGCCCGCACTCGAGCTG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
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| CDS-3UTR CAA 90 bp | GCAGCCAGCCCCGGCATGAGGAACTGGCCCGCCATGGCCACGAAGCTCGCCACCGCCAGCTCGGTGCCTTaGCCGGCCCCGCGGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: AASPGMRNWPAMATKLATASSVP*PAPRHQ Trigger: CTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGGC...GGTGGCGAGCTTCGTGGCCATGGCGGGCCAGTTCCTCATGCCGGGGCTGGCTGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145038.8 |
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| CDS-3UTR CAA 90 bp | CCAGTCCCGGCACAGCGCAGCCAGCCCCGGCATGAGGAACTGGCCCGCCATGGCCTGCTGTTGCTTCGGTaGCTCGTGGTCCCCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: PVPAQRSQPRHEELARHGLLLLR*LVVPQE Trigger: CTCCTGGGGGACCACGAGCAACCGAAGCAACAGCAG...GCCATGGCGGGCCAGTTCCTCATGCCGGGGCTGGCTGCGCTGTGCCGGGACTGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145038.8 |
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| CDS GCA 90 bp | CTTCATGCCATTGGCAGTGGCCCCCTCTGGCAGCCCGTCACCCACTaGAGCCACGTCATGCAGGCCCGAGTAGTCCTTGAGCTCCGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LHAIGSGPLWQPVTH*SHVMQARVVLELRV Trigger: AACGCGGAGCTCAAGGACTACTCGGGCCTGCATGACGTGGCTGCAGTGGGTGACGGGCTGCCAGAGGGGGCCACTGCCAATGGCATGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS CCA 90 bp | GCCAGCTCGGTGCCTTTGCCGGCCCCGCGGCACCAGAAATCGGGCTaGTCCAGAAGGAAGGAGTCCGAGAACTGGCTGAAGCCAATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ASSVPLPAPRHQKSG*SRRKESENWLKPMN Trigger: GTTCATTGGCTTCAGCCAGTTCTCGGACTCCTTCCTTCTGGACCAGCCCGATTTCTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000145038.8 |
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| CDS-3UTR CAA 90 bp | CCAGGGAGGGGACTGGCCACTGCATTGGTCACTTACAGGGACTTCCTCAGAGTGGGCTGCTCTCCCTTCTaGTGTGGCAGCAGCGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PGRGLATALVTYRDFLRVGCSPF*CGSSGC Trigger: GCAACCGCTGCTGCCACACAAGAAGGGAGAGCAGCC...CACTCTGAGGAAGTCCCTGTAAGTGACCAATGCAGTGGCCAGTCCCCTCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS GCA 90 bp | GTCCAGAAGGAAGGAGTCCGAGAACTGGCTGAAGCCAATGAACAGTaGCGGGATCCAGGTGAGCACCACCAGGGTCTTCTGGTAGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: VQKEGVRELAEANEQ*RDPGEHHQGLLVAA Trigger: GGCGGCTACCAGAAGACCCTGGTGGTGCTCACCTGGATCCCGGCACTGTTCATTGGCTTCAGCCAGTTCTCGGACTCCTTCCTTCTGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000145038.8 |
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| CDS-3UTR CAA 90 bp | CAGGAAGCCATTGAGGAAGACATGAGGTGGACCGCCTCCAGGTGCTGTGGGCACCTGCGCCCGAGGAACTaGACTACCAGACACATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QEAIEEDMRWTASRCCGHLRPRN*TTRHMA Trigger: AGCCATGTGTCTGGTAGTCAAGTTCCTCGGGCGCAG...GTGCCCACAGCACCTGGAGGCGGTCCACCTCATGTCTTCCTCAATGGCTTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CAA 90 bp | GAGTGTCTGAGGCCTGGGTGCCTGCTGTCTTTCTCACTTGGTCAGACCACACAGTCCTTGAGCTCCGCGTaGGTGAGCAGCAAGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ECLRPGCLLSFSLGQTTQSLSSA*VSSKGC Trigger: GCAGCCCTTGCTGCTCACCAACGCGGAGCTCAAGGA...CTGTGTGGTCTGACCAAGTGAGAAAGACAGCAGGCACCCAGGCCTCAGACACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CAA 90 bp | TCTTCAGAGGGTTATTTCCAGAGCATCTGGTTTCTCAGATGTGTTCCTCGGATGGCCAGCTCGGTGCCTTaGCCGGCCCCGCGGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSEGYFQSIWFLRCVPRMASSVP*PAPRHQ Trigger: CTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGGC...CATCCGAGGAACACATCTGAGAAACCAGATGCTCTGGAAATAACCCTCTGAAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CAA 90 bp | AAGACACTGCCAGCAGTCTGCCTTCTGGTTGATGGTCCTCTGGCCCCTGCCTCAATAGTCTTCATGCCATaGGCAGTGGCCCCCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KTLPAVCLLVDGPLAPASIVFMP*AVAPSG Trigger: GCCAGAGGGGGCCACTGCCAATGGCATGAAGACTAT...TGAGGCAGGGGCCAGAGGACCATCAACCAGAAGGCAGACTGCTGGCAGTGTCTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS GCA 90 bp | CACCAGCCCGAGCCCACCACACCTTATCACTGTGGGAGTGATCTCTaGACAGAAGAAGACACTGAGGCTCCCCACCGCATGGGATGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: HQPEPTTPYHCGSDL*TEEDTEAPHRMGCK Trigger: TTTGCATCCCATGCGGTGGGGAGCCTCAGTGTCTTCTTCTGTGCAGAGATCACTCCCACAGTGATAAGGTGTGGTGGGCTCGGGCTGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS CCA 90 bp | TCCACAGGTTCCTCGTCCCCACCACCTTCACGATGCACACCTTCTTaGGCCTCCGTGAAAGCTCTTTCTCGAGCTCTGGCATCACTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: STGSSSPPPSRCTPS*ASVKALSRALASLP Trigger: AGGGAGTGATGCCAGAGCTCGAGAAAGAGCTTTCACGGAGGCCCAAGAAGGTGTGCATCGTGAAGGTGGTGGGGACGAGGAACCTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CAA 90 bp | ACTCAGGACCCCAGGCATCAAAGAGAACATAGGCCAGCTGCCAGAAACAGGGTTCTGCTGTTGCTTCGGTaGCTCGTGGTCCCCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TQDPRHQREHRPAARNRVLLLLR*LVVPQE Trigger: CTCCTGGGGGACCACGAGCAACCGAAGCAACAGCAG...AACCCTGTTTCTGGCAGCTGGCCTATGTTCTCTTTGATGCCTGGGGTCCTGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS CCA 90 bp | CCTTCTTGTGTGGCAGCAGCGGTTGCCGTGTGTAGTGTTCCCCGTTaGCGATATTCTCAGGCAGGTTCTGGTTCCTGCTCTCAGGAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSCVAAAVAVCSVPR*RYSQAGSGSCSQEA Trigger: TGCTTCCTGAGAGCAGGAACCAGAACCTGCCTGAGAATATCGCCAACGGGGAACACTACACACGGCAACCGCTGCTGCCACACAAGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CAA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACCTGCGCCCGAGGAACTaGACTACCAGACACATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHLRPRN*TTRHMA Trigger: AGCCATGTGTCTGGTAGTCAAGTTCCTCGGGCGCAG...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CAA 90 bp | CTTTCTCACTTGGTCAGACCACACAGCAAGCTGGCTCACAAGCAAGCTTTCCTGTCCTTGAGCTCCGCGTaGGTGAGCAGCAAGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LSHLVRPHSKLAHKQAFLSLSSA*VSSKGC Trigger: GCAGCCCTTGCTGCTCACCAACGCGGAGCTCAAGGA...CAGGAAAGCTTGCTTGTGAGCCAGCTTGCTGTGTGGTCTGACCAAGTGAGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS TCA 90 bp | CCTCGTCCCCACCACCTTCACGATGCACACCTTCTTGGGCCTCCGTaGAAGCTCTTTCTCGAGCTCTGGCATCACTCCCTTGATATCACT | + |
|
Preference number: 5 (lower is better) Translates to: PRPHHLHDAHLLGPP*KLFLELWHHSLDIT Trigger: AGTGATATCAAGGGAGTGATGCCAGAGCTCGAGAAAGAGCTTTCACGGAGGCCCAAGAAGGTGTGCATCGTGAAGGTGGTGGGGACGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS GCA 90 bp | GTTCTCCAGGAGCGGCACCTTCACTTCATGGCCCATCATGCTTCTTaGAAAGCAGTGGTGGATCCCGTACCCTGTCAGCGAGTTCACACA | + |
|
Preference number: 5 (lower is better) Translates to: VLQERHLHFMAHHAS*KAVVDPVPCQRVHT Trigger: TGTGTGAACTCGCTGACAGGGTACGGGATCCACCACTGCTTTGCAAGAAGCATGATGGGCCATGAAGTGAAGGTGCCGCTCCTGGAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS GCA 90 bp | CGTAGAAGTTCTCCAGGAGCGGCACCTTCACTTCATGGCCCATCATaGTTCTTGCAAAGCAGTGGTGGATCCCGTACCCTGTCAGCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RRSSPGAAPSLHGPS*FLQSSGGSRTLSAS Trigger: ACTCGCTGACAGGGTACGGGATCCACCACTGCTTTGCAAGAAGCATGATGGGCCATGAAGTGAAGGTGCCGCTCCTGGAGAACTTCTACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CAA 90 bp | GATCAGACAAGGAGCTGGAAGGGGCTCAACTCAACCCTTTTTCTGGCCTTTGAACTGCTGTTGCTTCGGTaGCTCGTGGTCCCCCAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DQTRSWKGLNSTLFLAFELLLLR*LVVPQE Trigger: CTCCTGGGGGACCACGAGCAACCGAAGCAACAGCAG...TTCAAAGGCCAGAAAAAGGGTTGAGTTGAGCCCCTTCCAGCTCCTTGTCTGATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CAA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACGGCCCATCATGCTTCTaGCAAAGCAGTGGTGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHGPSCF*QSSGGS Trigger: GGATCCACCACTGCTTTGCAAGAAGCATGATGGGCC...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS GCA 90 bp | CCACAATGTTTTTCCACAGGTTCCTCGTCCCCACCACCTTCACGATaGACACCTTCTTGGGCCTCCGTGAAAGCTCTTTCTCGAGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PQCFSTGSSSPPPSR*TPSWASVKALSRAL Trigger: CAGAGCTCGAGAAAGAGCTTTCACGGAGGCCCAAGAAGGTGTGCATCGTGAAGGTGGTGGGGACGAGGAACCTGTGGAAAAACATTGTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS CCA 90 bp | AGCGGCACCTTCACTTCATGGCCCATCATGCTTCTTGCAAAGCAGTaGTGGATCCCGTACCCTGTCAGCGAGTTCACACAGAGAACCACA | + |
|
Preference number: 5 (lower is better) Translates to: SGTFTSWPIMLLAKQ*WIPYPVSEFTQRTT Trigger: TGTGGTTCTCTGTGTGAACTCGCTGACAGGGTACGGGATCCACCACTGCTTTGCAAGAAGCATGATGGGCCATGAAGTGAAGGTGCCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CAA 90 bp | GAGTGTCTGAGGCCTGGGTGCCTGCTGTCTTTCTCACTTGGTCAGACCACACAGAACGCAATGGAGAACTaGTCCTTGACGCTGTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: ECLRPGCLLSFSLGQTTQNAMEN*SLTLSL Trigger: GAGTGACAGCGTCAAGGACAAGTTCTCCATTGCGTT...CTGTGTGGTCTGACCAAGTGAGAAAGACAGCAGGCACCCAGGCCTCAGACACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS CCA 90 bp | GGCACCTTCACTTCATGGCCCATCATGCTTCTTGCAAAGCAGTGGTaGATCCCGTACCCTGTCAGCGAGTTCACACAGAGAACCACAATG | + |
|
Preference number: 5 (lower is better) Translates to: GTFTSWPIMLLAKQW*IPYPVSEFTQRTTM Trigger: CATTGTGGTTCTCTGTGTGAACTCGCTGACAGGGTACGGGATCCACCACTGCTTTGCAAGAAGCATGATGGGCCATGAAGTGAAGGTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CAA 90 bp | ATGTGCCACCCAGGGGCTGGGTGTGTGATGGTCACGAGATTCTTTGAATGGCACAACGCAATGGAGAACTaGTCCTTGACGCTGTCACTC | + |
|
Preference number: 5 (lower is better) Translates to: MCHPGAGCVMVTRFFEWHNAMEN*SLTLSL Trigger: GAGTGACAGCGTCAAGGACAAGTTCTCCATTGCGTT...GTGCCATTCAAAGAATCTCGTGACCATCACACACCCAGCCCCTGGGTGGCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CAA 90 bp | TCTTCAGAGGGTTATTTCCAGAGCATCTGGTTTCTCAGATGTGTTCCTCGGATGGGCTGCTCTCCCTTCTaGTGTGGCAGCAGCGGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SSEGYFQSIWFLRCVPRMGCSPF*CGSSGC Trigger: GCAACCGCTGCTGCCACACAAGAAGGGAGAGCAGCC...CATCCGAGGAACACATCTGAGAAACCAGATGCTCTGGAAATAACCCTCTGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS TCA 90 bp | CTTGACGCTGTCACTCATCCCTACGGCCAACTTCAGCTGCAATTCTaGGTCTGGATGCTGGCTGTATTTGCCGATCAAGTTGAGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LDAVTHPYGQLQLQF*VWMLAVFADQVEKP Trigger: GGGCTTCTCAACTTGATCGGCAAATACAGCCAGCATCCAGACTCAGAATTGCAGCTGAAGTTGGCCGTAGGGATGAGTGACAGCGTCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
||
| CDS CCA 90 bp | GGAGTGATCTCTGCACAGAAGAAGACACTGAGGCTCCCCACCGCATaGGATGCAAACATTCCCACGATGGAAAACGCAATGGAGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GVISAQKKTLRLPTA*DANIPTMENAMENL Trigger: CAAGTTCTCCATTGCGTTTTCCATCGTGGGAATGTTTGCATCCCATGCGGTGGGGAGCCTCAGTGTCTTCTTCTGTGCAGAGATCACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CAA 90 bp | AAGACACTGCCAGCAGTCTGCCTTCTGGTTGATGGTCCTCTGGCCCCTGCCTCACAGGAAGTAGCCTTTTaGGTTGTGCAGCTCAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: KTLPAVCLLVDGPLAPASQEVAF*VVQLNN Trigger: ATTATTGAGCTGCACAACCAAAAAGGCTACTTCCTG...TGAGGCAGGGGCCAGAGGACCATCAACCAGAAGGCAGACTGCTGGCAGTGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS TCA 90 bp | GGAAAACGCAATGGAGAACTTGTCCTTGACGCTGTCACTCATCCCTaGGTCTGGATGCTGGCTGTATTTGCCGATCAAGTTGAGAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GKRNGELVLDAVTHP*VWMLAVFADQVEKP Trigger: GGGCTTCTCAACTTGATCGGCAAATACAGCCAGCATCCAGACTCAGGGATGAGTGACAGCGTCAAGGACAAGTTCTCCATTGCGTTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148390.3 |
||
| CDS GCA 90 bp | TCACTCATCCCTACGGCCAACTTCAGCTGCAATTCTGAGTCTGGATaGTGGCTGTATTTGCCGATCAAGTTGAGAAGCCCGAGCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SLIPTANFSCNSESG*WLYLPIKLRSPSCR Trigger: TCTACAGCTCGGGCTTCTCAACTTGATCGGCAAATACAGCCAGCATCCAGACTCAGAATTGCAGCTGAAGTTGGCCGTAGGGATGAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
||
| CDS GCA 90 bp | GATCTCTGCACAGAAGAAGACACTGAGGCTCCCCACCGCATGGGATaGAAACATTCCCACGATGGAAAACGCAATGGAGAACTTGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: DLCTEEDTEAPHRMG*KHSHDGKRNGELVL Trigger: AAGGACAAGTTCTCCATTGCGTTTTCCATCGTGGGAATGTTTGCATCCCATGCGGTGGGGAGCCTCAGTGTCTTCTTCTGTGCAGAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS GCA 90 bp | ATGGAGAACTTGTCCTTGACGCTGTCACTCATCCCTGAGTCTGGATaGTGGCTGTATTTGCCGATCAAGTTGAGAAGCCCGAGCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: MENLSLTLSLIPESG*WLYLPIKLRSPSCR Trigger: TCTACAGCTCGGGCTTCTCAACTTGATCGGCAAATACAGCCAGCATCCAGACTCAGGGATGAGTGACAGCGTCAAGGACAAGTTCTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148390.3 |
||
| CDS CCA 90 bp | CTCATCCCTACGGCCAACTTCAGCTGCAATTCTGAGTCTGGATGCTaGCTGTATTTGCCGATCAAGTTGAGAAGCCCGAGCTGTAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LIPTANFSCNSESGC*LYLPIKLRSPSCRS Trigger: ACTTCTACAGCTCGGGCTTCTCAACTTGATCGGCAAATACAGCCAGCATCCAGACTCAGAATTGCAGCTGAAGTTGGCCGTAGGGATGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
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| CDS-3UTR CAA 90 bp | TTCTCAGATGTGTTCCTCGGATGTCTGGAAAGACAGAATTCCCCACACCGGTTGCTTGCTGACCACGTTTaGGATGAGACCAGTGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FSDVFLGCLERQNSPHRLLADHV*DETSAD Trigger: ATCCGCACTGGTCTCATCCAAAACGTGGTCAGCAAG...CAACCGGTGTGGGGAATTCTGTCTTTCCAGACATCCGAGGAACACATCTGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS-3UTR CAA 90 bp | CCTGCCTCAGTGGCAGCTTCTTTGCTAATCCCTGATGGGTTGCCTCTGGTCGCTACAGGATCAACTTCTTaGCTGATTCAAATTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PASVAASLLIPDGLPLVATGSTS*LIQIAG Trigger: CCCAGCAATTTGAATCAGCAAAGAAGTTGATCCTGT...AGCGACCAGAGGCAACCCATCAGGGATTAGCAAAGAAGCTGCCACTGAGGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CAA 90 bp | TCTTCAGAGGGTTATTTCCAGAGCATCTGGTTTCTCAGATGTGTTCCTCGGATGATAGTCTTCATGCCATaGGCAGTGGCCCCCTCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSEGYFQSIWFLRCVPRMIVFMP*AVAPSG Trigger: GCCAGAGGGGGCCACTGCCAATGGCATGAAGACTAT...CATCCGAGGAACACATCTGAGAAACCAGATGCTCTGGAAATAACCCTCTGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CAA 90 bp | CCGATCTCAGCCTCTGACTACCTTTTAAGACTAGGACTCTTAAAGCAGAGTGAGCTTGCTGACCACGTTTaGGATGAGACCAGTGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PISASDYLLRLGLLKQSELADHV*DETSAD Trigger: ATCCGCACTGGTCTCATCCAAAACGTGGTCAGCAAG...CTCACTCTGCTTTAAGAGTCCTAGTCTTAAAAGGTAGTCAGAGGCTGAGATCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CAA 90 bp | CTTTCTCACTTGGTCAGACCACACAGCAAGCTGGCTCACAAGCAAGCTTTCCTGACAGGATCAACTTCTTaGCTGATTCAAATTGCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LSHLVRPHSKLAHKQAFLTGSTS*LIQIAG Trigger: CCCAGCAATTTGAATCAGCAAAGAAGTTGATCCTGT...CAGGAAAGCTTGCTTGTGAGCCAGCTTGCTGTGTGGTCTGACCAAGTGAGAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CAA 90 bp | TTAAGACTAGGACTCTTAAAGCAGAGTGAGAGGCCCCACCATCTGCAGGGCGAACAGGAAGTAGCCTTTTaGGTTGTGCAGCTCAATAAT | + |
|
Preference number: 5 (lower is better) Translates to: LRLGLLKQSERPHHLQGEQEVAF*VVQLNN Trigger: ATTATTGAGCTGCACAACCAAAAAGGCTACTTCCTG...TTCGCCCTGCAGATGGTGGGGCCTCTCACTCTGCTTTAAGAGTCCTAGTCTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CAA 90 bp | CATAGCTCTATTCGTAATGCATACAAGGTGAGGATGATTCCAGCCAGGCAAAATCTTGCTGACCACGTTTaGGATGAGACCAGTGCGGAT | + |
|
Preference number: 5 (lower is better) Translates to: HSSIRNAYKVRMIPARQNLADHV*DETSAD Trigger: ATCCGCACTGGTCTCATCCAAAACGTGGTCAGCAAG...ATTTTGCCTGGCTGGAATCATCCTCACCTTGTATGCATTACGAATAGAGCTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145038.8 |
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| CDS TCA 90 bp | GGCATCACTCCCTTGATATCACTCTCAGGGCTCACACAGTTCTTCTaGGTAAGGTACAGGATCAACTTCTTTGCTGATTCAAATTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GITPLISLSGLTQFF*VRYRINFFADSNCW Trigger: CCAGCAATTTGAATCAGCAAAGAAGTTGATCCTGTACCTTACTCAGAAGAACTGTGTGAGCCCTGAGAGTGATATCAAGGGAGTGATGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CAA 90 bp | ACTCAACCCTTTTTCTGGCCTTTGAATTCTAGCAACTGTCATTTAGAAGTCACTGGCCCATCATGCTTCTaGCAAAGCAGTGGTGGATCC | + |
|
Preference number: 5 (lower is better) Translates to: TQPFFWPLNSSNCHLEVTGPSCF*QSSGGS Trigger: GGATCCACCACTGCTTTGCAAGAAGCATGATGGGCC...AGTGACTTCTAAATGACAGTTGCTAGAATTCAAAGGCCAGAAAAAGGGTTGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS TCA 90 bp | AAATCCTTCAAAGAACCTGAGTGTGCTGAACATTGTCACATTCACTaGCAGTGCCACAGTCAGTCCAAAGATGAGGATGAAGATGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KSFKEPECAEHCHIH*QCHSQSKDEDEDGG Trigger: TCCACCATCTTCATCCTCATCTTTGGACTGACTGTGGCACTGTCAGTGAATGTGACAATGTTCAGCACACTCAGGTTCTTTGAAGGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS-3UTR CAA 90 bp | ACTCAACCCTTTTTCTGGCCTTTGAATTCTAGCAACTGTCATTTAGAAGTCACTATGGAGAACTTGTCCTaGACGCTGTCACTCATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: TQPFFWPLNSSNCHLEVTMENLS*TLSLIP Trigger: AGGGATGAGTGACAGCGTCAAGGACAAGTTCTCCAT...AGTGACTTCTAAATGACAGTTGCTAGAATTCAAAGGCCAGAAAAAGGGTTGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS GCA 72 bp | TGGGGTGCAGCGCAGGCAGTGGCTGGATCTCCGCGCTaGTGCCGGAGCCCGCGCGCCCTCCGAGGGGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: WGAAQAVAGSPR*CRSPRALRGAP Trigger: CGGCGCCCCTCGGAGGGCGCGCGGGCTCCGGCAGCAGCGCGGAGATCCAGCCACTGCCTGCGCTGCACCCCA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
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| CDS CCA 72 bp | TGCGGGCCGCCGCTGGGGTGCAGCGCAGGCAGTGGCTaGATCTCCGCGCTGCTGCCGGAGCCCGCGCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CGPPLGCSAGSG*ISALLPEPARP Trigger: AGGGCGCGCGGGCTCCGGCAGCAGCGCGGAGATCCAGCCACTGCCTGCGCTGCACCCCAGCGGCGGCCCGCA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
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| CDS CAA 72 bp | CGGCCGGTGACAGTGGCACCCGCCAGCTCGGTGCCTTaGCCGGCCCCGCGGCACCAGAAATCGGGCTGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RPVTVAPASSVP*PAPRHQKSGWS Trigger: GGACCAGCCCGATTTCTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGGCGGGTGCCACTGTCACCGGCCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040336.12 ENSMUST00000145038.8 ENSMUST00000148390.3 |
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| CDS CAA 90 bp | TCACCCCATCGGCCGGTGACAGTGGCACCCGCCAGCTCGGTGCCTTaGCCGGCCCCGCGGCACCAGAAATCGGGCTGGTCCAGAAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SPHRPVTVAPASSVP*PAPRHQKSGWSRRK Trigger: CTTCCTTCTGGACCAGCCCGATTTCTGGTGCCGCGGGGCCGGCAAAGGCACCGAGCTGGCGGGTGCCACTGTCACCGGCCGATGGGGTGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040336.12 ENSMUST00000145038.8 ENSMUST00000148390.3 |
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| CDS TCA 72 bp | GGCTGGTCCAATTGCCCATGTCACCCCATCGGCCGGTaGCAGTGGCACCCGCCAGCTCGGTGCCTTTGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: GWSNCPCHPIGR*QWHPPARCLCR Trigger: CCGGCAAAGGCACCGAGCTGGCGGGTGCCACTGTCACCGGCCGATGGGGTGACATGGGCAATTGGACCAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040336.12 ENSMUST00000145038.8 ENSMUST00000148390.3 |
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| CDS CCA 72 bp | GTGCCTTTGCCGGCCCCGCGGCACCAGAAATCGGGCTaGTCCAGAAGGAAGGAGTCCGAGAACTGGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VPLPAPRHQKSG*SRRKESENWLK Trigger: CTTCAGCCAGTTCTCGGACTCCTTCCTTCTGGACCAGCCCGATTTCTGGTGCCGCGGGGCCGGCAAAGGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000145038.8 |
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| CDS CAA 72 bp | AGCACAGGCCGCCGGCCAACCCTTGCTGACCACGTTTaGGATGAGACCAGTGCGGATGCCGTAGTCCCACGC | + |
|
Preference number: 6 (lower is better) Translates to: STGRRPTLADHV*DETSADAVVPR Trigger: GCGTGGGACTACGGCATCCGCACTGGTCTCATCCAAAACGTGGTCAGCAAGGGTTGGCCGGCGGCCTGTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145038.8 |
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| CDS TCA 72 bp | GCGGATGCCGTAGTCCCACGCGTGGCAGTCGCAATTTaGGTCGTTGTTCCCCTTGCCTGGAGGGGATGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ADAVVPRVAVAI*VVVPLAWRGWE Trigger: CTCCCATCCCCTCCAGGCAAGGGGAACAACGACTCAAATTGCGACTGCCACGCGTGGGACTACGGCATCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040336.12 ENSMUST00000145038.8 ENSMUST00000148390.3 |
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| CDS CAA 90 bp | GTGAGGATCATGAAGAGCAGCAGCCCTCCCCTGCGCCCGAGGAACTaGACTACCAGACACATGGCTAGGCAGGAGGCCAGTGCGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VRIMKSSSPPLRPRN*TTRHMARQEASAML Trigger: CAGCATCGCACTGGCCTCCTGCCTAGCCATGTGTCTGGTAGTCAAGTTCCTCGGGCGCAGGGGAGGGCTGCTGCTCTTCATGATCCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS CCA 72 bp | CTACATAGTCTTCATGCCATTGGCAGTGGCCCCCTCTaGCAGCCCGTCACCCACTGCAGCCACGTCATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LHSLHAIGSGPL*QPVTHCSHVMQ Trigger: CTGCATGACGTGGCTGCAGTGGGTGACGGGCTGCCAGAGGGGGCCACTGCCAATGGCATGAAGACTATGTAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS CAA 72 bp | TGCGGATGCCGTAGTCCCACGCGTGGCAGTCGCAATTaGAGTCGTTGTTCCCCTTGCCTGGAGGGGATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CGCRSPTRGSRN*SRCSPCLEGMG Trigger: TCCCATCCCCTCCAGGCAAGGGGAACAACGACTCAAATTGCGACTGCCACGCGTGGGACTACGGCATCCGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040336.12 ENSMUST00000145038.8 ENSMUST00000148390.3 |
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| CDS CAA 72 bp | ATGAAGAGCAGCAGCCCTCCCCTGCGCCCGAGGAACTaGACTACCAGACACATGGCTAGGCAGGAGGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: MKSSSPPLRPRN*TTRHMARQEAS Trigger: ACTGGCCTCCTGCCTAGCCATGTGTCTGGTAGTCAAGTTCCTCGGGCGCAGGGGAGGGCTGCTGCTCTTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS CAA 90 bp | TTCCACAGGTTCCTCGTCCCCACCACCTTCACGATGCACACCTTCTaGGGCCTCCGTGAAAGCTCTTTCTCGAGCTCTGGCATCACTCCC | + |
|
Preference number: 6 (lower is better) Translates to: FHRFLVPTTFTMHTF*GLRESSFSSSGITP Trigger: GGGAGTGATGCCAGAGCTCGAGAAAGAGCTTTCACGGAGGCCCAAGAAGGTGTGCATCGTGAAGGTGGTGGGGACGAGGAACCTGTGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS GCA 72 bp | GAAGGAGTCCGAGAACTGGCTGAAGCCAATGAACAGTaGCGGGATCCAGGTGAGCACCACCAGGGTCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: EGVRELAEANEQ*RDPGEHHQGLL Trigger: CAGAAGACCCTGGTGGTGCTCACCTGGATCCCGGCACTGTTCATTGGCTTCAGCCAGTTCTCGGACTCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000145038.8 |
||
| CDS CCA 72 bp | TCCTCGTCCCCACCACCTTCACGATGCACACCTTCTTaGGCCTCCGTGAAAGCTCTTTCTCGAGCTCTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSPPPSRCTPS*ASVKALSRALA Trigger: TGCCAGAGCTCGAGAAAGAGCTTTCACGGAGGCCCAAGAAGGTGTGCATCGTGAAGGTGGTGGGGACGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS CCA 72 bp | GTGGCAGCAGCGGTTGCCGTGTGTAGTGTTCCCCGTTaGCGATATTCTCAGGCAGGTTCTGGTTCCTGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: VAAAVAVCSVPR*RYSQAGSGSCS Trigger: AGAGCAGGAACCAGAACCTGCCTGAGAATATCGCCAACGGGGAACACTACACACGGCAACCGCTGCTGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS CAA 72 bp | TTCCTCGTCCCCACCACCTTCACGATGCACACCTTCTaGGGCCTCCGTGAAAGCTCTTTCTCGAGCTCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FLVPTTFTMHTF*GLRESSFSSSG Trigger: GCCAGAGCTCGAGAAAGAGCTTTCACGGAGGCCCAAGAAGGTGTGCATCGTGAAGGTGGTGGGGACGAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS CAA 72 bp | GGAGCGGCACCTTCACTTCATGGCCCATCATGCTTCTaGCAAAGCAGTGGTGGATCCCGTACCCTGTCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: GAAPSLHGPSCF*QSSGGSRTLSA Trigger: CGCTGACAGGGTACGGGATCCACCACTGCTTTGCAAGAAGCATGATGGGCCATGAAGTGAAGGTGCCGCTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS CAA 72 bp | CAAGGGCTGCTCTCCCTTCTTGTGTGGCAGCAGCGGTaGCCGTGTGTAGTGTTCCCCGTTGGCGATATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: QGLLSLLVWQQR*PCVVFPVGDIL Trigger: GAGAATATCGCCAACGGGGAACACTACACACGGCAACCGCTGCTGCCACACAAGAAGGGAGAGCAGCCCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS GCA 72 bp | TCTCCAGGAGCGGCACCTTCACTTCATGGCCCATCATaGTTCTTGCAAAGCAGTGGTGGATCCCGTACCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SPGAAPSLHGPS*FLQSSGGSRTL Trigger: CAGGGTACGGGATCCACCACTGCTTTGCAAGAAGCATGATGGGCCATGAAGTGAAGGTGCCGCTCCTGGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
||
| CDS GCA 72 bp | GAGCCCACCACACCTTATCACTGTGGGAGTGATCTCTaGACAGAAGAAGACACTGAGGCTCCCCACCGCATG | + |
|
Preference number: 6 (lower is better) Translates to: EPTTPYHCGSDL*TEEDTEAPHRM Trigger: CATGCGGTGGGGAGCCTCAGTGTCTTCTTCTGTGCAGAGATCACTCCCACAGTGATAAGGTGTGGTGGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS CCA 72 bp | AAATCGGGCTGGTCCAGAAGGAAGGAGTCCGAGAACTaGCTGAAGCCAATGAACAGTGCCGGGATCCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: KSGWSRRKESEN*LKPMNSAGIQV Trigger: CACCTGGATCCCGGCACTGTTCATTGGCTTCAGCCAGTTCTCGGACTCCTTCCTTCTGGACCAGCCCGATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000145038.8 |
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| CDS CCA 72 bp | CCAGACACATGGCTAGGCAGGAGGCCAGTGCGATGCTaGCCATGGTGTAGTAGTCAGCGTAGAAGTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PDTWLGRRPVRC*PWCSSQRRSSP Trigger: TGGAGAACTTCTACGCTGACTACTACACCATGGCCAGCATCGCACTGGCCTCCTGCCTAGCCATGTGTCTGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS CAA 90 bp | AGTTCTCCAGGAGCGGCACCTTCACTTCATGGCCCATCATGCTTCTaGCAAAGCAGTGGTGGATCCCGTACCCTGTCAGCGAGTTCACAC | + |
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Preference number: 6 (lower is better) Translates to: SSPGAAPSLHGPSCF*QSSGGSRTLSASSH Trigger: GTGTGAACTCGCTGACAGGGTACGGGATCCACCACTGCTTTGCAAGAAGCATGATGGGCCATGAAGTGAAGGTGCCGCTCCTGGAGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS TCA 72 bp | CACCACCTTCACGATGCACACCTTCTTGGGCCTCCGTaGAAGCTCTTTCTCGAGCTCTGGCATCACTCCCTT | + |
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Preference number: 6 (lower is better) Translates to: HHLHDAHLLGPP*KLFLELWHHSL Trigger: AAGGGAGTGATGCCAGAGCTCGAGAAAGAGCTTTCACGGAGGCCCAAGAAGGTGTGCATCGTGAAGGTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS GCA 72 bp | CTACCAGACACATGGCTAGGCAGGAGGCCAGTGCGATaGTGGCCATGGTGTAGTAGTCAGCGTAGAAGTTCT | + |
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Preference number: 6 (lower is better) Translates to: LPDTWLGRRPVR*WPWCSSQRRSS Trigger: AGAACTTCTACGCTGACTACTACACCATGGCCAGCATCGCACTGGCCTCCTGCCTAGCCATGTGTCTGGTAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS GCA 72 bp | TTTTCCACAGGTTCCTCGTCCCCACCACCTTCACGATaGACACCTTCTTGGGCCTCCGTGAAAGCTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: FSTGSSSPPPSR*TPSWASVKALS Trigger: AGAAAGAGCTTTCACGGAGGCCCAAGAAGGTGTGCATCGTGAAGGTGGTGGGGACGAGGAACCTGTGGAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS CAA 90 bp | ACGGCCAACTTCAGCTGCAATTCTGAGTCTGGATGCTGGCTGTATTaGCCGATCAAGTTGAGAAGCCCGAGCTGTAGAAGTGAGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: TANFSCNSESGCWLY*PIKLRSPSCRSEAR Trigger: CCTGGCCTCACTTCTACAGCTCGGGCTTCTCAACTTGATCGGCAAATACAGCCAGCATCCAGACTCAGAATTGCAGCTGAAGTTGGCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
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| CDS TCA 72 bp | TTCCCACGATGGAAAACGCAATGGAGAACTTGTCCTTaGCGCTGTCACTCATCCCTGAGTCTGGATGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: FPRWKTQWRTCP*RCHSSLSLDAG Trigger: GCCAGCATCCAGACTCAGGGATGAGTGACAGCGTCAAGGACAAGTTCTCCATTGCGTTTTCCATCGTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148390.3 |
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| CDS GCA 72 bp | CCTACGGCCAACTTCAGCTGCAATTCTGAGTCTGGATaGTGGCTGTATTTGCCGATCAAGTTGAGAAGCCCG | + |
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Preference number: 6 (lower is better) Translates to: PTANFSCNSESG*WLYLPIKLRSP Trigger: CGGGCTTCTCAACTTGATCGGCAAATACAGCCAGCATCCAGACTCAGAATTGCAGCTGAAGTTGGCCGTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
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| CDS CCA 72 bp | ACTTCATGGCCCATCATGCTTCTTGCAAAGCAGTGGTaGATCCCGTACCCTGTCAGCGAGTTCACACAGAGA | + |
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Preference number: 6 (lower is better) Translates to: TSWPIMLLAKQW*IPYPVSEFTQR Trigger: TCTCTGTGTGAACTCGCTGACAGGGTACGGGATCCACCACTGCTTTGCAAGAAGCATGATGGGCCATGAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS CCA 72 bp | ACGGCCAACTTCAGCTGCAATTCTGAGTCTGGATGCTaGCTGTATTTGCCGATCAAGTTGAGAAGCCCGAGC | + |
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Preference number: 6 (lower is better) Translates to: TANFSCNSESGC*LYLPIKLRSPS Trigger: GCTCGGGCTTCTCAACTTGATCGGCAAATACAGCCAGCATCCAGACTCAGAATTGCAGCTGAAGTTGGCCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
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| CDS CCA 72 bp | TCTGCACAGAAGAAGACACTGAGGCTCCCCACCGCATaGGATGCAAACATTCCCACGATGGAAAACGCAATG | + |
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Preference number: 6 (lower is better) Translates to: SAQKKTLRLPTA*DANIPTMENAM Trigger: CATTGCGTTTTCCATCGTGGGAATGTTTGCATCCCATGCGGTGGGGAGCCTCAGTGTCTTCTTCTGTGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS CAA 72 bp | ATTATCACACACAAGATCCCACTTGCTGACCACGTTTaGGATGAGACCAGTGCGGATGCCGTAGTCCCACGC | + |
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Preference number: 6 (lower is better) Translates to: IITHKIPLADHV*DETSADAVVPR Trigger: GCGTGGGACTACGGCATCCGCACTGGTCTCATCCAAAACGTGGTCAGCAAGTGGGATCTTGTGTGTGATAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS CAA 90 bp | GCATGGGATGCAAACATTCCCACGATGGAAAACGCAATGGAGAACTaGTCCTTGACGCTGTCACTCATCCCTACGGCCAACTTCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: AWDANIPTMENAMEN*SLTLSLIPTANFSC Trigger: GCAGCTGAAGTTGGCCGTAGGGATGAGTGACAGCGTCAAGGACAAGTTCTCCATTGCGTTTTCCATCGTGGGAATGTTTGCATCCCATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
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| CDS CAA 90 bp | GCATGGGATGCAAACATTCCCACGATGGAAAACGCAATGGAGAACTaGTCCTTGACGCTGTCACTCATCCCTGAGTCTGGATGCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: AWDANIPTMENAMEN*SLTLSLIPESGCWL Trigger: CAGCCAGCATCCAGACTCAGGGATGAGTGACAGCGTCAAGGACAAGTTCTCCATTGCGTTTTCCATCGTGGGAATGTTTGCATCCCATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148390.3 |
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| CDS TCA 72 bp | TTCCCACGATGGAAAACGCAATGGAGAACTTGTCCTTaGCGCTGTCACTCATCCCTACGGCCAACTTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: FPRWKTQWRTCP*RCHSSLRPTSA Trigger: AGCTGAAGTTGGCCGTAGGGATGAGTGACAGCGTCAAGGACAAGTTCTCCATTGCGTTTTCCATCGTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
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| CDS GCA 72 bp | ACAGAAGAAGACACTGAGGCTCCCCACCGCATGGGATaGAAACATTCCCACGATGGAAAACGCAATGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: TEEDTEAPHRMG*KHSHDGKRNGE Trigger: TTCTCCATTGCGTTTTCCATCGTGGGAATGTTTGCATCCCATGCGGTGGGGAGCCTCAGTGTCTTCTTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS CAA 72 bp | ATTCCCACGATGGAAAACGCAATGGAGAACTTGTCCTaGACGCTGTCACTCATCCCTACGGCCAACTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: IPTMENAMENLS*TLSLIPTANFS Trigger: GCTGAAGTTGGCCGTAGGGATGAGTGACAGCGTCAAGGACAAGTTCTCCATTGCGTTTTCCATCGTGGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
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| CDS CAA 72 bp | GCAAACATTCCCACGATGGAAAACGCAATGGAGAACTaGTCCTTGACGCTGTCACTCATCCCTACGGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: ANIPTMENAMEN*SLTLSLIPTAN Trigger: GTTGGCCGTAGGGATGAGTGACAGCGTCAAGGACAAGTTCTCCATTGCGTTTTCCATCGTGGGAATGTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
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| CDS CAA 72 bp | CTGTCACTCATCCCTGAGTCTGGATGCTGGCTGTATTaGCCGATCAAGTTGAGAAGCCCGAGCTGTAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: LSLIPESGCWLY*PIKLRSPSCRS Trigger: ACTTCTACAGCTCGGGCTTCTCAACTTGATCGGCAAATACAGCCAGCATCCAGACTCAGGGATGAGTGACAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148390.3 |
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| CDS CAA 72 bp | ATTCCCACGATGGAAAACGCAATGGAGAACTTGTCCTaGACGCTGTCACTCATCCCTGAGTCTGGATGCTGG | + |
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Preference number: 6 (lower is better) Translates to: IPTMENAMENLS*TLSLIPESGCW Trigger: CCAGCATCCAGACTCAGGGATGAGTGACAGCGTCAAGGACAAGTTCTCCATTGCGTTTTCCATCGTGGGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148390.3 |
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| CDS CAA 72 bp | GCAAACATTCCCACGATGGAAAACGCAATGGAGAACTaGTCCTTGACGCTGTCACTCATCCCTGAGTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: ANIPTMENAMEN*SLTLSLIPESG Trigger: TCCAGACTCAGGGATGAGTGACAGCGTCAAGGACAAGTTCTCCATTGCGTTTTCCATCGTGGGAATGTTTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148390.3 |
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| CDS TCA 72 bp | AATGGAGAACTTGTCCTTGACGCTGTCACTCATCCCTaGGTCTGGATGCTGGCTGTATTTGCCGATCAAGTT | + |
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Preference number: 6 (lower is better) Translates to: NGELVLDAVTHP*VWMLAVFADQV Trigger: AACTTGATCGGCAAATACAGCCAGCATCCAGACTCAGGGATGAGTGACAGCGTCAAGGACAAGTTCTCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148390.3 |
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| CDS CAA 72 bp | TTCAGCTGCAATTCTGAGTCTGGATGCTGGCTGTATTaGCCGATCAAGTTGAGAAGCCCGAGCTGTAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: FSCNSESGCWLY*PIKLRSPSCRS Trigger: ACTTCTACAGCTCGGGCTTCTCAACTTGATCGGCAAATACAGCCAGCATCCAGACTCAGAATTGCAGCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040336.12 |
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| CDS GCA 72 bp | GTAAGGTACAGGATCAACTTCTTTGCTGATTCAAATTaGTGGGTAGCCATTAGCCATCGGAGAGACTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: VRYRINFFADSN*WVAISHRRDSG Trigger: CCCTGAGTCTCTCCGATGGCTAATGGCTACCCAGCAATTTGAATCAGCAAAGAAGTTGATCCTGTACCTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS CCA 72 bp | AGGTACAGGATCAACTTCTTTGCTGATTCAAATTGCTaGGTAGCCATTAGCCATCGGAGAGACTCAGGGAAA | + |
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Preference number: 6 (lower is better) Translates to: RYRINFFADSNC*VAISHRRDSGK Trigger: TTTCCCTGAGTCTCTCCGATGGCTAATGGCTACCCAGCAATTTGAATCAGCAAAGAAGTTGATCCTGTACCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS TCA 72 bp | CCCTTGATATCACTCTCAGGGCTCACACAGTTCTTCTaGGTAAGGTACAGGATCAACTTCTTTGCTGATTCA | + |
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Preference number: 6 (lower is better) Translates to: PLISLSGLTQFF*VRYRINFFADS Trigger: TGAATCAGCAAAGAAGTTGATCCTGTACCTTACTCAGAAGAACTGTGTGAGCCCTGAGAGTGATATCAAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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| CDS CCA 72 bp | AAGATTAATCCAACCAGTAAGGAGAACTTAGCGATATaGACTTTCCAGGTATTATCACACACAAGATCCCAC | + |
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Preference number: 6 (lower is better) Translates to: KINPTSKENLAI*TFQVLSHTRSH Trigger: GTGGGATCTTGTGTGTGATAATACCTGGAAAGTCCATATCGCTAAGTTCTCCTTACTGGTTGGATTAATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040336.12 ENSMUST00000148390.3 |
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