Pregenerated sensors for SLC22A22 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022366Ensembl transcript IDs: ENSMUST00000022995.13, ENSMUST00000110196.8, ENSMUST00000137764.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | GCAGTAGCTTCATTTAATAAATATATCCGTAACTGCTaGTCAATGGGTAAAGTCTCTAGGGTACAGGACAGA | + |
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Preference number: 3 (lower is better) Translates to: AVASFNKYIRNC*SMGKVSRVQDR Trigger: TCTGTCCTGTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATTTATTAAATGAAGCTACTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR TCA 90 bp | CAGGACAGAATAAAGAGTCTTTATATGGATGGAACCCTGTGGATCTTGACTCTCGCAGAAAGAGGATGCTaGTTGTTGCCACGATGGGTA | + |
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Preference number: 4 (lower is better) Translates to: QDRIKSLYMDGTLWILTLAERGC*LLPRWV Trigger: TACCCATCGTGGCAACAATCAGCATCCTCTTTCTGC...GAGAGTCAAGATCCACAGGGTTCCATCCATATAAAGACTCTTTATTCTGTCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR TCA 90 bp | ATAAATATATCCGTAACTGCTGATCAATGGGTAAAGTCTCTAGGGTACAGGACAGGGGTGCCACTGGACTaGTGCTTCTTCCAAAACAAG | + |
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Preference number: 4 (lower is better) Translates to: INISVTADQWVKSLGYRTGVPLD*CFFQNK Trigger: CTTGTTTTGGAAGAAGCATCAGTCCAGTGGCACCCC...TGTCCTGTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR GCA 90 bp | CAGGACAGAATAAAGAGTCTTTATATGGATGGAACCCTGTGGATCTTGACTCTCACTATGATTGTGGGGTaGCACTGGACTGATGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: QDRIKSLYMDGTLWILTLTMIVG*HWTDAS Trigger: AGAAGCATCAGTCCAGTGGCACCCCACAATCATAGT...GAGAGTCAAGATCCACAGGGTTCCATCCATATAAAGACTCTTTATTCTGTCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR CCA 90 bp | GTCTCTAGGGTACAGGACAGAATAAAGAGTCTTTATATGGATGGAACCCTGTGGTTGGGCCCATTGGGATaGAGACCTTCATCAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSRVQDRIKSLYMDGTLWLGPLG*RPSSNL Trigger: AAGATTTGATGAAGGTCTCCATCCCAATGGGCCCAA...CCACAGGGTTCCATCCATATAAAGACTCTTTATTCTGTCCTGTACCCTAGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR CCA 90 bp | GTACAGGACAGAATAAAGAGTCTTTATATGGATGGAACCCTGTGGATCTTGACTAGTAAACGGAGAAATTaGGGGCAAAGGCACAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: VQDRIKSLYMDGTLWILTSKRRN*GQRHSR Trigger: CCTACTGTGCCTTTGCCCCCAATTTCTCCGTTTACT...AGTCAAGATCCACAGGGTTCCATCCATATAAAGACTCTTTATTCTGTCCTGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR TCA 90 bp | ATAAATATATCCGTAACTGCTGATCAATGGGTAAAGTCTCTAGGGTACAGGACATTCTCCAGGACATCATaGGGGGATAACACCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: INISVTADQWVKSLGYRTFSRTS*GDNTKD Trigger: ATCCTTGGTGTTATCCCCTCATGATGTCCTGGAGAA...TGTCCTGTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATTTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR TCA 90 bp | CATTTAATAAATATATCCGTAACTGCTGATCAATGGGTAAAGTCTCTAGGGTACGGGGTGCCACTGGACTaGTGCTTCTTCCAAAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: HLINISVTADQWVKSLGYGVPLD*CFFQNK Trigger: CTTGTTTTGGAAGAAGCATCAGTCCAGTGGCACCCC...GTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATTTATTAAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR TCA 90 bp | CAGGACAGAATAAAGAGTCTTTATATGGATGGAACCCTGTGGATCTTGACTCTCAAGGCATATGCAAGTTaGAGTAAGTGCCAATCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: QDRIKSLYMDGTLWILTLKAYAS*SKCQSE Trigger: TTCGGATTGGCACTTACTTCAACTTGCATATGCCTT...GAGAGTCAAGATCCACAGGGTTCCATCCATATAAAGACTCTTTATTCTGTCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR TCA 90 bp | TTAATAAATATATCCGTAACTGCTGATCAATGGGTAAAGTCTCTAGGGTACAGGGCAGAAAGAGGATGCTaGTTGTTGCCACGATGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LINISVTADQWVKSLGYRAERGC*LLPRWV Trigger: TACCCATCGTGGCAACAATCAGCATCCTCTTTCTGC...CCTGTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATTTATTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR CCA 90 bp | GTACAGGACAGAATAAAGAGTCTTTATATGGATGGAACCCTGTGGATCTTGACTTTGGGCCCATTGGGATaGAGACCTTCATCAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: VQDRIKSLYMDGTLWILTLGPLG*RPSSNL Trigger: AAGATTTGATGAAGGTCTCCATCCCAATGGGCCCAA...AGTCAAGATCCACAGGGTTCCATCCATATAAAGACTCTTTATTCTGTCCTGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR CCA 90 bp | CAGGACAGAATAAAGAGTCTTTATATGGATGGAACCCTGTGGATCTTGACTCTCAAGGTTAAAGGTCTCTaGCAGAAAGAGGATGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QDRIKSLYMDGTLWILTLKVKGL*QKEDAD Trigger: ATCAGCATCCTCTTTCTGCCAGAGACCTTTAACCTT...GAGAGTCAAGATCCACAGGGTTCCATCCATATAAAGACTCTTTATTCTGTCCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR CCA 90 bp | GTCTCTAGGGTACAGGACAGAATAAAGAGTCTTTATATGGATGGAACCCTGTGGGATAATGTCAGTATGTaGAAGGTTAAAGGTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSRVQDRIKSLYMDGTLWDNVSM*KVKGLW Trigger: CCAGAGACCTTTAACCTTCCACATACTGACATTATC...CCACAGGGTTCCATCCATATAAAGACTCTTTATTCTGTCCTGTACCCTAGAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR TCA 90 bp | GTCTCTAGGGTACAGGACAGAATAAAGAGTCTTTATATGGATGGAACCCTGTGGCCACTGTCACCTACATaGTGTAGAATTTCATCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSRVQDRIKSLYMDGTLWPLSPT*CRISSK Trigger: TTTTGATGAAATTCTACATCATGTAGGTGACAGTGG...CCACAGGGTTCCATCCATATAAAGACTCTTTATTCTGTCCTGTACCCTAGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR TCA 90 bp | GTCTCTAGGGTACAGGACAGAATAAAGAGTCTTTATATGGATGGAACCCTGTGGATGATCATACAAATCTaGAATCTTCCACTGTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: VSRVQDRIKSLYMDGTLWMIIQI*NLPLSP Trigger: AGGTGACAGTGGAAGATTTCAGATTTGTATGATCAT...CCACAGGGTTCCATCCATATAAAGACTCTTTATTCTGTCCTGTACCCTAGAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR TCA 90 bp | GTACAGGACAGAATAAAGAGTCTTTATATGGATGGAACCCTGTGGATCTTGACTAGTTCCTTCCATGCTTaGTCTGTTTTGCCAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: VQDRIKSLYMDGTLWILTSSFHA*SVLPVI Trigger: AATCACTGGCAAAACAGATCAAGCATGGAAGGAACT...AGTCAAGATCCACAGGGTTCCATCCATATAAAGACTCTTTATTCTGTCCTGTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR TCA 90 bp | GTCTCTAGGGTACAGGACAGAATAAAGAGTCTTTATATGGATGGAACCCTGTGGTGTAAAATATGTGAGTaGTTTACTGGGCACGTCTAT | + |
|
Preference number: 4 (lower is better) Translates to: VSRVQDRIKSLYMDGTLWCKICE*FTGHVY Trigger: ATAGACGTGCCCAGTAAATCACTCACATATTTTACA...CCACAGGGTTCCATCCATATAAAGACTCTTTATTCTGTCCTGTACCCTAGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR CCA 90 bp | GTACAGGACAGAATAAAGAGTCTTTATATGGATGGAACCCTGTGGATCTTGACTAAGGTTAAAGGTCTCTaGCAGAAAGAGGATGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VQDRIKSLYMDGTLWILTKVKGL*QKEDAD Trigger: ATCAGCATCCTCTTTCTGCCAGAGACCTTTAACCTT...AGTCAAGATCCACAGGGTTCCATCCATATAAAGACTCTTTATTCTGTCCTGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR TCA 90 bp | CAGGACAGAATAAAGAGTCTTTATATGGATGGAACCCTGTGGATCTTGACTCTCTTGTGCTTATACAAGTaGAAGCTGCAAAACATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QDRIKSLYMDGTLWILTLLCLYK*KLQNIL Trigger: AAGGATGTTTTGCAGCTTTCACTTGTATAAGCACAA...GAGAGTCAAGATCCACAGGGTTCCATCCATATAAAGACTCTTTATTCTGTCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR CCA 90 bp | ATAAATATATCCGTAACTGCTGATCAATGGGTAAAGTCTCTAGGGTACAGGACATCTAAAAATTGCCATTaGGTGTACCTAAAGCGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: INISVTADQWVKSLGYRTSKNCH*VYLKRR Trigger: CCGACGCTTTAGGTACACCCAATGGCAATTTTTAGA...TGTCCTGTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR CCA 90 bp | CATTTAATAAATATATCCGTAACTGCTGATCAATGGGTAAAGTCTCTAGGGTACAGTAAACGGAGAAATTaGGGGCAAAGGCACAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLINISVTADQWVKSLGYSKRRN*GQRHSR Trigger: CCTACTGTGCCTTTGCCCCCAATTTCTCCGTTTACT...GTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATTTATTAAATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR CCA 90 bp | TTAATAAATATATCCGTAACTGCTGATCAATGGGTAAAGTCTCTAGGGTACAGGTCTAAAAATTGCCATTaGGTGTACCTAAAGCGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: LINISVTADQWVKSLGYRSKNCH*VYLKRR Trigger: CCGACGCTTTAGGTACACCCAATGGCAATTTTTAGA...CCTGTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATTTATTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR CCA 90 bp | ATAAATATATCCGTAACTGCTGATCAATGGGTAAAGTCTCTAGGGTACAGGACAGATAATGTCAGTATGTaGAAGGTTAAAGGTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: INISVTADQWVKSLGYRTDNVSM*KVKGLW Trigger: CCAGAGACCTTTAACCTTCCACATACTGACATTATC...TGTCCTGTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR TCA 90 bp | CATTTAATAAATATATCCGTAACTGCTGATCAATGGGTAAAGTCTCTAGGGTACAGTTCCTTCCATGCTTaGTCTGTTTTGCCAGTGATT | + |
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Preference number: 4 (lower is better) Translates to: HLINISVTADQWVKSLGYSSFHA*SVLPVI Trigger: AATCACTGGCAAAACAGATCAAGCATGGAAGGAACT...GTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATTTATTAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR TCA 90 bp | ATAAATATATCCGTAACTGCTGATCAATGGGTAAAGTCTCTAGGGTACAGGACATGTAAAATATGTGAGTaGTTTACTGGGCACGTCTAT | + |
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Preference number: 4 (lower is better) Translates to: INISVTADQWVKSLGYRTCKICE*FTGHVY Trigger: ATAGACGTGCCCAGTAAATCACTCACATATTTTACA...TGTCCTGTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR TCA 90 bp | CATTTAATAAATATATCCGTAACTGCTGATCAATGGGTAAAGTCTCTAGGGTACCCACTGTCACCTACATaGTGTAGAATTTCATCAAAA | + |
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Preference number: 4 (lower is better) Translates to: HLINISVTADQWVKSLGYPLSPT*CRISSK Trigger: TTTTGATGAAATTCTACATCATGTAGGTGACAGTGG...GTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATTTATTAAATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR TCA 90 bp | CATTTAATAAATATATCCGTAACTGCTGATCAATGGGTAAAGTCTCTAGGGTACATGATCATACAAATCTaGAATCTTCCACTGTCACCT | + |
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Preference number: 4 (lower is better) Translates to: HLINISVTADQWVKSLGYMIIQI*NLPLSP Trigger: AGGTGACAGTGGAAGATTTCAGATTTGTATGATCAT...GTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATTTATTAAATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR CCA 90 bp | CATTTAATAAATATATCCGTAACTGCTGATCAATGGGTAAAGTCTCTAGGGTACGAAGTAAAAACACTGTaGTCATATGTCCATCCATCT | + |
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Preference number: 4 (lower is better) Translates to: HLINISVTADQWVKSLGYEVKTL*SYVHPS Trigger: AGATGGATGGACATATGACCACAGTGTTTTTACTTC...GTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATTTATTAAATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS GCA 90 bp | TGGCCAATACTGTTGAACAGTCCACTGAGTACTATGATTGTGGGGTaGCACTGGACTGATGCTTCTTCCAAAACAAGGATAAGAGAGTTG | + |
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Preference number: 5 (lower is better) Translates to: WPILLNSPLSTMIVG*HWTDASSKTRIREL Trigger: CAACTCTCTTATCCTTGTTTTGGAAGAAGCATCAGTCCAGTGGCACCCCACAATCATAGTACTCAGTGGACTGTTCAACAGTATTGGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR CAA 90 bp | GTACAGGACAGAATAAAGAGTCTTTATATGGATGGAACCCTGTGGATCTTGACTATGCCTTTCTTCCCATaGATGGAGGCAATTCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: VQDRIKSLYMDGTLWILTMPFFP*MEAILW Trigger: CCAGAGAATTGCCTCCATCAATGGGAAGAAAGGCAT...AGTCAAGATCCACAGGGTTCCATCCATATAAAGACTCTTTATTCTGTCCTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS CCA 90 bp | ATACTGTTGAACAGTCCACTGAGTACTATGATTGTGGGGTGCCACTaGACTGATGCTTCTTCCAAAACAAGGATAAGAGAGTTGATCAAA | + |
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Preference number: 5 (lower is better) Translates to: ILLNSPLSTMIVGCH*TDASSKTRIRELIK Trigger: TTTGATCAACTCTCTTATCCTTGTTTTGGAAGAAGCATCAGTCCAGTGGCACCCCACAATCATAGTACTCAGTGGACTGTTCAACAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR CAA 90 bp | ATAAATATATCCGTAACTGCTGATCAATGGGTAAAGTCTCTAGGGTACAGGACAATGCCTTTCTTCCCATaGATGGAGGCAATTCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: INISVTADQWVKSLGYRTMPFFP*MEAILW Trigger: CCAGAGAATTGCCTCCATCAATGGGAAGAAAGGCAT...TGTCCTGTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS TCA 90 bp | GCTCCTAGAAAAATCTGGGTCAAGAACATGTTCTTTCCCAACAGTTaGACATCCAACAAGAGGCCAACAAAGCTGAAAAGTTCTGCAAAA | + |
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Preference number: 5 (lower is better) Translates to: APRKIWVKNMFFPNS*TSNKRPTKLKSSAK Trigger: TTTTGCAGAACTTTTCAGCTTTGTTGGCCTCTTGTTGGATGTTCAACTGTTGGGAAAGAACATGTTCTTGACCCAGATTTTTCTAGGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS CCA 90 bp | CATCAATCTTTTCCTTTTCTCCATATCCTTGATAATGTCAGTATGTaGAAGGTTAAAGGTCTCTGGCAGAAAGAGGATGCTGATTGTTGC | + |
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Preference number: 5 (lower is better) Translates to: HQSFPFLHILDNVSM*KVKGLWQKEDADCC Trigger: GCAACAATCAGCATCCTCTTTCTGCCAGAGACCTTTAACCTTCCACATACTGACATTATCAAGGATATGGAGAAAAGGAAAAGATTGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR CAA 90 bp | GTACAGGACAGAATAAAGAGTCTTTATATGGATGGAACCCTGTGGATCTTGACTACATCTTTCTTAAGTTaGGATCGCAAGTCCTCAGTA | + |
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Preference number: 5 (lower is better) Translates to: VQDRIKSLYMDGTLWILTTSFLS*DRKSSV Trigger: TACTGAGGACTTGCGATCCAAACTTAAGAAAGATGT...AGTCAAGATCCACAGGGTTCCATCCATATAAAGACTCTTTATTCTGTCCTGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS TCA 90 bp | TGTTCTTTCCCAACAGTTGAACATCCAACAAGAGGCCAACAAAGCTaGAAAGTTCTGCAAAAAGTAAACTGGAATTCGAAAGCACTATTT | + |
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Preference number: 5 (lower is better) Translates to: CSFPTVEHPTRGQQS*KVLQKVNWNSKALF Trigger: AAATAGTGCTTTCGAATTCCAGTTTACTTTTTGCAGAACTTTTCAGCTTTGTTGGCCTCTTGTTGGATGTTCAACTGTTGGGAAAGAACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR CAA 90 bp | TTAATAAATATATCCGTAACTGCTGATCAATGGGTAAAGTCTCTAGGGTACAGGACATCTTTCTTAAGTTaGGATCGCAAGTCCTCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LINISVTADQWVKSLGYRTSFLS*DRKSSV Trigger: TACTGAGGACTTGCGATCCAAACTTAAGAAAGATGT...CCTGTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATTTATTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS-3UTR CAA 90 bp | ATAAATATATCCGTAACTGCTGATCAATGGGTAAAGTCTCTAGGGTACAGGACACTTTTCTCCATATCCTaGATAATGTCAGTATGTGGA | + |
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Preference number: 5 (lower is better) Translates to: INISVTADQWVKSLGYRTLFSIS*IMSVCG Trigger: TCCACATACTGACATTATCAAGGATATGGAGAAAAG...TGTCCTGTACCCTAGAGACTTTACCCATTGATCAGCAGTTACGGATATATTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS TCA 72 bp | TGGGTGTACCTAAAGCGTCGGCATTGCTCGGGTTTCTaGTTTGGGCCCATTGGGATGGAGACCTTCATCAAA | + |
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Preference number: 6 (lower is better) Translates to: WVYLKRRHCSGF*FGPIGMETFIK Trigger: TTTGATGAAGGTCTCCATCCCAATGGGCCCAAATCAGAAACCCGAGCAATGCCGACGCTTTAGGTACACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 ENSMUST00000137764.2 |
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| CDS GCA 72 bp | CCCATTGATGGAGGCAATTCTCTGGAGTTCCTTCCATaGTTGATCTGTTTTGCCAGTGATTATGAGCCACCG | + |
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Preference number: 6 (lower is better) Translates to: PIDGGNSLEFLP*LICFASDYEPP Trigger: CGGTGGCTCATAATCACTGGCAAAACAGATCAAGCATGGAAGGAACTCCAGAGAATTGCCTCCATCAATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS TCA 72 bp | TTGATGGAGGCAATTCTCTGGAGTTCCTTCCATGCTTaGTCTGTTTTGCCAGTGATTATGAGCCACCGGACT | + |
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Preference number: 6 (lower is better) Translates to: LMEAILWSSFHA*SVLPVIMSHRT Trigger: AGTCCGGTGGCTCATAATCACTGGCAAAACAGATCAAGCATGGAAGGAACTCCAGAGAATTGCCTCCATCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS GCA 72 bp | CTGTTGAACAGTCCACTGAGTACTATGATTGTGGGGTaGCACTGGACTGATGCTTCTTCCAAAACAAGGATA | + |
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Preference number: 6 (lower is better) Translates to: LLNSPLSTMIVG*HWTDASSKTRI Trigger: TATCCTTGTTTTGGAAGAAGCATCAGTCCAGTGGCACCCCACAATCATAGTACTCAGTGGACTGTTCAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS CCA 72 bp | AACAGTCCACTGAGTACTATGATTGTGGGGTGCCACTaGACTGATGCTTCTTCCAAAACAAGGATAAGAGAG | + |
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Preference number: 6 (lower is better) Translates to: NSPLSTMIVGCH*TDASSKTRIRE Trigger: CTCTCTTATCCTTGTTTTGGAAGAAGCATCAGTCCAGTGGCACCCCACAATCATAGTACTCAGTGGACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS TCA 72 bp | TCCACTGAGTACTATGATTGTGGGGTGCCACTGGACTaGTGCTTCTTCCAAAACAAGGATAAGAGAGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: STEYYDCGVPLD*CFFQNKDKRVD Trigger: ATCAACTCTCTTATCCTTGTTTTGGAAGAAGCATCAGTCCAGTGGCACCCCACAATCATAGTACTCAGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS CAA 90 bp | GGGTGCCACTGGACTGATGCTTCTTCCAAAACAAGGATAAGAGAGTaGATCAAAATAGTACTTTGGAAGGCAGATAACAGGAATCTCAAA | + |
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Preference number: 6 (lower is better) Translates to: GCHWTDASSKTRIRE*IKIVLWKADNRNLK Trigger: TTTGAGATTCCTGTTATCTGCCTTCCAAAGTACTATTTTGATCAACTCTCTTATCCTTGTTTTGGAAGAAGCATCAGTCCAGTGGCACCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS TCA 72 bp | AATGTCCTGCCAAAGACGTGGCTTGTGCATAGTATTTaGATGACTGAAAATCACATACTAAATCCCACTCAG | + |
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Preference number: 6 (lower is better) Translates to: NVLPKTWLVHSI*MTENHILNPTQ Trigger: CTGAGTGGGATTTAGTATGTGATTTTCAGTCATTCAAATACTATGCACAAGCCACGTCTTTGGCAGGACATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 ENSMUST00000137764.2 |
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| CDS TCA 72 bp | AAAATCTGGGTCAAGAACATGTTCTTTCCCAACAGTTaGACATCCAACAAGAGGCCAACAAAGCTGAAAAGT | + |
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Preference number: 6 (lower is better) Translates to: KIWVKNMFFPNS*TSNKRPTKLKS Trigger: ACTTTTCAGCTTTGTTGGCCTCTTGTTGGATGTTCAACTGTTGGGAAAGAACATGTTCTTGACCCAGATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS CCA 72 bp | TTTCCTTTTCTCCATATCCTTGATAATGTCAGTATGTaGAAGGTTAAAGGTCTCTGGCAGAAAGAGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: FPFLHILDNVSM*KVKGLWQKEDA Trigger: AGCATCCTCTTTCTGCCAGAGACCTTTAACCTTCCACATACTGACATTATCAAGGATATGGAGAAAAGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS CAA 72 bp | TGGACTGATGCTTCTTCCAAAACAAGGATAAGAGAGTaGATCAAAATAGTACTTTGGAAGGCAGATAACAGG | + |
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Preference number: 6 (lower is better) Translates to: WTDASSKTRIRE*IKIVLWKADNR Trigger: CCTGTTATCTGCCTTCCAAAGTACTATTTTGATCAACTCTCTTATCCTTGTTTTGGAAGAAGCATCAGTCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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| CDS CAA 72 bp | TCAGTCTCTAGCTCAGTGCTGTTAAAAGTTGATATGTaGGAATCTAAAAATTGCCATTGGGTGTACCTAAAG | + |
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Preference number: 6 (lower is better) Translates to: SVSSSVLLKVDM*ESKNCHWVYLK Trigger: CTTTAGGTACACCCAATGGCAATTTTTAGATTCCAACATATCAACTTTTAACAGCACTGAGCTAGAGACTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 ENSMUST00000137764.2 |
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| CDS CAA 90 bp | TTTATTCTGAAAAGCTTTCCAGTTGAATTCACATCTTTCTTAAGTTaGGATCGCAAGTCCTCAGTAGTTAGATTTTGTGCAATGCCTTTC | + |
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Preference number: 6 (lower is better) Translates to: FILKSFPVEFTSFLS*DRKSSVVRFCAMPF Trigger: GAAAGGCATTGCACAAAATCTAACTACTGAGGACTTGCGATCCAAACTTAAGAAAGATGTGAATTCAACTGGAAAGCTTTTCAGAATAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022995.13 ENSMUST00000110196.8 |
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