Pregenerated sensors for SLC22A21 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063652Ensembl transcript IDs: ENSMUST00000076493.11, ENSMUST00000124221.8, ENSMUST00000143352.2
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GATCACCTCTGCCTCTTTAATTCGGCCTTGAGAGATGAGCCATCGTaGGGACTCAGGGATGAACCACCAGAGAGCCCCACACAGCACGCC | + |
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Preference number: 1 (lower is better) Translates to: DHLCLFNSALRDEPS*GLRDEPPESPTQHA Trigger: GGCGTGCTGTGTGGGGCTCTCTGGTGGTTCATCCCTGAGTCCCCACGATGGCTCATCTCTCAAGGCCGAATTAAAGAGGCAGAGGTGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124221.8 |
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| 3UTR TCA 90 bp | TTGGCAGCTTTGCGGATGATCACCTCTGCCTCTTTAATTCGGCCTTaGGAGATGAGCCATCGTGGGGACTCAGGGATGAACCACCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: LAALRMITSASLIRP*EMSHRGDSGMNHQR Trigger: TCTCTGGTGGTTCATCCCTGAGTCCCCACGATGGCTCATCTCTCAAGGCCGAATTAAAGAGGCAGAGGTGATCATCCGCAAAGCTGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124221.8 |
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| 3UTR TCA 90 bp | TACATTTCCTTCAAGACACAGATAAGTGGCTGGCAGCCAGAATTCTaGTTTACACAGCAGTGGAAGACAAGCCTTGGCCTCAACAGTAGA | + |
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Preference number: 1 (lower is better) Translates to: YISFKTQISGWQPEF*FTQQWKTSLGLNSR Trigger: TCTACTGTTGAGGCCAAGGCTTGTCTTCCACTGCTGTGTAAATCAGAATTCTGGCTGCCAGCCACTTATCTGTGTCTTGAAGGAAATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR CCA 90 bp | CTGCTTTATGGACCAGCCTCCACCTTAGTTTCCTTTGGGCTCCCTTaGTCTTGTGTTATATCACGAGTTAAGAGTGTTGCAGTTAAAACT | + |
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Preference number: 1 (lower is better) Translates to: LLYGPASTLVSFGLP*SCVISRVKSVAVKT Trigger: AGTTTTAACTGCAACACTCTTAACTCGTGATATAACACAAGACCAAGGGAGCCCAAAGGAAACTAAGGTGGAGGCTGGTCCATAAAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR TCA 90 bp | ACCCACCGATGTGACACGACTGCAGCCAGCTACTCTGAGAGACTGTaGCACAATTTACATTTCTTTCTTGTAATTTTCCTCATGATTATA | + |
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Preference number: 1 (lower is better) Translates to: THRCDTTAASYSERL*HNLHFFLVIFLMII Trigger: TATAATCATGAGGAAAATTACAAGAAAGAAATGTAAATTGTGTCACAGTCTCTCAGAGTAGCTGGCTGCAGTCGTGTCACATCGGTGGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR-3UTR TCA 90 bp | AGAGATGAGCCATCGTGGGGACTCAGGGATGAACCACCAGAGAGCCCCACACAGAGCCACCGGCTCCTCTaGGGGGCTGTCTCCCCCACC | + |
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Preference number: 2 (lower is better) Translates to: RDEPSWGLRDEPPESPTQSHRLL*GAVSPT Trigger: GGTGGGGGAGACAGCCCCTCAGAGGAGCCGGTGGCT...CTGTGTGGGGCTCTCTGGTGGTTCATCCCTGAGTCCCCACGATGGCTCATCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000143352.2 |
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| 3UTR CAA 90 bp | TTTTTGGCACTCAGAGCAGCTCTAGTGGCTAAGATTGGGAAGGCCTaGTATGGTGGTAACTGCACACCAGCCAGGGTGACCCTGGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: FLALRAALVAKIGKA*YGGNCTPARVTLGW Trigger: CCAGCCCAGGGTCACCCTGGCTGGTGTGCAGTTACCACCATACAAGGCCTTCCCAATCTTAGCCACTAGAGCTGCTCTGAGTGCCAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR-3UTR TCA 90 bp | GACAATCACACTGAACACAAAACACCCACCGATGTGACACGACTGCAGCCAGCTACAAGCCCAGGACCCTaGCCACACACACAGTACCTG | + |
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Preference number: 2 (lower is better) Translates to: DNHTEHKTPTDVTRLQPATSPGP*PHTQYL Trigger: CAGGTACTGTGTGTGTGGTCAGGGTCCTGGGCTTGT...AGCTGGCTGCAGTCGTGTCACATCGGTGGGTGTTTTGTGTTCAGTGTGATTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR-3UTR TCA 90 bp | AGAGATGAGCCATCGTGGGGACTCAGGGATGAACCACCAGAGAGCCCCACACAGGTGCAACAATCCCATTaGTTTTGGCAGCTTTGCGGA | + |
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Preference number: 2 (lower is better) Translates to: RDEPSWGLRDEPPESPTQVQQSH*FWQLCG Trigger: TCCGCAAAGCTGCCAAAATCAATGGGATTGTTGCAC...CTGTGTGGGGCTCTCTGGTGGTTCATCCCTGAGTCCCCACGATGGCTCATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000124221.8 |
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| 3UTR CAA 90 bp | GCTGGCAGCCAGAATTCTGATTTACACAGCAGTGGAAGACAAGCCTaGGCCTCAACAGTAGATTTCTCACAGGGCCTGGACAAGCCCAGG | + |
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Preference number: 2 (lower is better) Translates to: AGSQNSDLHSSGRQA*ASTVDFSQGLDKPR Trigger: CCTGGGCTTGTCCAGGCCCTGTGAGAAATCTACTGTTGAGGCCAAGGCTTGTCTTCCACTGCTGTGTAAATCAGAATTCTGGCTGCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR CAA 90 bp | TTTGGCAGCTTTGCGGATGATCACCTCTGCCTCTTTAATTCGGCCTaGAGAGATGAGCCATCGTGGGGACTCAGGGATGAACCACCAGAG | + |
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Preference number: 2 (lower is better) Translates to: FGSFADDHLCLFNSA*RDEPSWGLRDEPPE Trigger: CTCTGGTGGTTCATCCCTGAGTCCCCACGATGGCTCATCTCTCAAGGCCGAATTAAAGAGGCAGAGGTGATCATCCGCAAAGCTGCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124221.8 |
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| 3UTR-3UTR GCA 90 bp | ATTGCCAGCAGCAGCCTCCTCCACTCTCTGATGAAGTATGCAAACAGAGGCAGCTCTGGACACTCATGCTaGCTCAAAGGCAGTGCCACA | + |
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Preference number: 2 (lower is better) Translates to: IASSSLLHSLMKYANRGSSGHSC*LKGSAT Trigger: TGTGGCACTGCCTTTGAGGCAGCATGAGTGTCCAGA...GCTGCCTCTGTTTGCATACTTCATCAGAGAGTGGAGGAGGCTGCTGCTGGCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143352.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCATTTCTTTGGAAGGCCCATGTCCACCACTGTGATGGGATGTGCAAGCTGTGGCCCTAGAGGAAGGTaGCTCTCCAGGACAGATGCT | + |
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Preference number: 2 (lower is better) Translates to: IHFFGRPMSTTVMGCASCGPRGR*LSRTDA Trigger: AGCATCTGTCCTGGAGAGTCACCTTCCTCTAGGGCC...ACAGCTTGCACATCCCATCACAGTGGTGGACATGGGCCTTCCAAAGAAATGAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR-3UTR TCA 90 bp | GCATGTGCTTTCGGAGCACCATGGCAACATAATCAGAAGAGAAGACAATCACACTCCTTTTGGTGCACTTaGTCAAACCCAGGGCCCTGT | + |
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Preference number: 2 (lower is better) Translates to: ACAFGAPWQHNQKRRQSHSFWCT*SNPGPC Trigger: ACAGGGCCCTGGGTTTGATCAAGTGCACCAAAAGGA...GTGTGATTGTCTTCTCTTCTGATTATGTTGCCATGGTGCTCCGAAAGCACATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR CAA 90 bp | TCGCTTGGATCGAAGATAGTGGAAGGTGCAACAATCCCATTGATTTaGGCAGCTTTGCGGATGATCACCTCTGCCTCTTTAATTCGGCCT | + |
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Preference number: 2 (lower is better) Translates to: SLGSKIVEGATIPLI*AALRMITSASLIRP Trigger: AGGCCGAATTAAAGAGGCAGAGGTGATCATCCGCAAAGCTGCCAAAATCAATGGGATTGTTGCACCTTCCACTATCTTCGATCCAAGCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124221.8 |
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| 3UTR-3UTR GCA 90 bp | GCATGTGCTTTCGGAGCACCATGGCAACATAATCAGAAGAGAAGACAATCACACCACTGTGATGGGATGTaGAAGCTGTGTGTAGTTCGC | + |
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Preference number: 2 (lower is better) Translates to: ACAFGAPWQHNQKRRQSHHCDGM*KLCVVR Trigger: GCGAACTACACACAGCTTGCACATCCCATCACAGTG...GTGTGATTGTCTTCTCTTCTGATTATGTTGCCATGGTGCTCCGAAAGCACATGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR-3UTR CCA 90 bp | TCTGCAGTTAGGGAAAGGAGGGAAAAACGGACCTGCTGTTCTATGTGCACCCTTCTCAATTCATTTCTTTaGAAGGCCCATGTCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: SAVRERREKRTCCSMCTLLNSFL*KAHVHH Trigger: GTGGTGGACATGGGCCTTCCAAAGAAATGAATTGAG...AAGGGTGCACATAGAACAGCAGGTCCGTTTTTCCCTCCTTTCCCTAACTGCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR-3UTR TCA 90 bp | GCATGTGCTTTCGGAGCACCATGGCAACATAATCAGAAGAGAAGACAATCACACTGCAGCCAGCTACTCTaGGAGACTGTGACACAATTT | + |
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Preference number: 2 (lower is better) Translates to: ACAFGAPWQHNQKRRQSHCSQLL*ETVTQF Trigger: AAATTGTGTCACAGTCTCTCAGAGTAGCTGGCTGCA...GTGTGATTGTCTTCTCTTCTGATTATGTTGCCATGGTGCTCCGAAAGCACATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR-3UTR GCA 90 bp | GCATGTGCTTTCGGAGCACCATGGCAACATAATCAGAAGAGAAGACAATCACACACTCTCCAGGACAGATaGTTGTTAGACACAATGCCA | + |
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Preference number: 2 (lower is better) Translates to: ACAFGAPWQHNQKRRQSHTLQDR*LLDTMP Trigger: TGGCATTGTGTCTAACAAGCATCTGTCCTGGAGAGT...GTGTGATTGTCTTCTCTTCTGATTATGTTGCCATGGTGCTCCGAAAGCACATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR-3UTR GCA 90 bp | AGAAGAGAAGACAATCACACTGAACACAAAACACCCACCGATGTGACACGACTGACCTGCTGTTCTATGTaGACCCTTATCAGGTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: RREDNHTEHKTPTDVTRLTCCSM*TLIRSY Trigger: GTAAGACCTGATAAGGGTGCACATAGAACAGCAGGT...CAGTCGTGTCACATCGGTGGGTGTTTTGTGTTCAGTGTGATTGTCTTCTCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTAAGGTGGCGAATATAATTCTAACTGACTTGGAAAGCATTTCTGTTCCCCGGTGTGCATGGCCATaGTCAAAAACAAGATATTCT | + |
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Preference number: 2 (lower is better) Translates to: TPKVANIILTDLESISVPRCAWP*SKTRYS Trigger: AGAATATCTTGTTTTTGACCATGGCCATGCACACCG...GGGAACAGAAATGCTTTCCAAGTCAGTTAGAATTATATTCGCCACCTTAGGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143352.2 |
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| 3UTR TCA 72 bp | AGAAGCAGCTGGGAGAGCGGCAGCCACCGGCTCCTCTaGGGGGCTGTCTCCCCCACCCTCTCAGTCTCCATG | + |
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Preference number: 3 (lower is better) Translates to: RSSWESGSHRLL*GAVSPTLSVSM Trigger: CATGGAGACTGAGAGGGTGGGGGAGACAGCCCCTCAGAGGAGCCGGTGGCTGCCGCTCTCCCAGCTGCTTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000143352.2 |
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| 3UTR GCA 72 bp | GTGGCTAAGATTGGGAAGGCCTTGTATGGTGGTAACTaGACACCAGCCAGGGTGACCCTGGGCTGGGGAACA | + |
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Preference number: 3 (lower is better) Translates to: VAKIGKALYGGN*TPARVTLGWGT Trigger: TGTTCCCCAGCCCAGGGTCACCCTGGCTGGTGTGCAGTTACCACCATACAAGGCCTTCCCAATCTTAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR-3UTR CAA 90 bp | CATCGTGGGGACTCAGGGATGAACCACCAGAGAGCCCCACACAGCACGCCTGGTGTTCACAGAGAAGACTaGTATGAAGCTGAATCCGGT | + |
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Preference number: 3 (lower is better) Translates to: HRGDSGMNHQRAPHSTPGVHRED*YEAESG Trigger: ACCGGATTCAGCTTCATACAAGTCTTCTCTGTGAAC...ACCAGGCGTGCTGTGTGGGGCTCTCTGGTGGTTCATCCCTGAGTCCCCACGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143352.2 |
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| 3UTR CCA 72 bp | TGCCTCTTTAATTCGGCCTTGAGAGATGAGCCATCGTaGGGACTCAGGGATGAACCACCAGAGAGCCCCACA | + |
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Preference number: 3 (lower is better) Translates to: CLFNSALRDEPS*GLRDEPPESPT Trigger: TGTGGGGCTCTCTGGTGGTTCATCCCTGAGTCCCCACGATGGCTCATCTCTCAAGGCCGAATTAAAGAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124221.8 |
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| 3UTR TCA 72 bp | GACCCTGACCACACACACAGTACCTGGCTGTGGGACTaGGCAGTCACAGTCAACACACTGTCTGCTTTATGG | + |
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Preference number: 3 (lower is better) Translates to: DPDHTHSTWLWD*AVTVNTLSALW Trigger: CCATAAAGCAGACAGTGTGTTGACTGTGACTGCTCAGTCCCACAGCCAGGTACTGTGTGTGTGGTCAGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR-3UTR CAA 90 bp | GACAATCACACTGAACACAAAACACCCACCGATGTGACACGACTGCAGCCAGCTCTCCAGGACAGATGCTaGTTAGACACAATGCCAACA | + |
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Preference number: 3 (lower is better) Translates to: DNHTEHKTPTDVTRLQPALQDRC*LDTMPT Trigger: TGTTGGCATTGTGTCTAACAAGCATCTGTCCTGGAG...AGCTGGCTGCAGTCGTGTCACATCGGTGGGTGTTTTGTGTTCAGTGTGATTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR GCA 72 bp | CCCATTGATTTTGGCAGCTTTGCGGATGATCACCTCTaGCTCTTTAATTCGGCCTTGAGAGATGAGCCATCG | + |
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Preference number: 3 (lower is better) Translates to: PIDFGSFADDHL*LFNSALRDEPS Trigger: CGATGGCTCATCTCTCAAGGCCGAATTAAAGAGGCAGAGGTGATCATCCGCAAAGCTGCCAAAATCAATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124221.8 |
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| 3UTR-3UTR CAA 90 bp | GACAATCACACTGAACACAAAACACCCACCGATGTGACACGACTGCAGCCAGCTACTCAATTCATTTCTTaGGAAGGCCCATGTCCACCA | + |
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Preference number: 3 (lower is better) Translates to: DNHTEHKTPTDVTRLQPATQFIS*EGPCPP Trigger: TGGTGGACATGGGCCTTCCAAAGAAATGAATTGAGT...AGCTGGCTGCAGTCGTGTCACATCGGTGGGTGTTTTGTGTTCAGTGTGATTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR TCA 72 bp | TTCAAGACACAGATAAGTGGCTGGCAGCCAGAATTCTaGTTTACACAGCAGTGGAAGACAAGCCTTGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: FKTQISGWQPEF*FTQQWKTSLGL Trigger: GAGGCCAAGGCTTGTCTTCCACTGCTGTGTAAATCAGAATTCTGGCTGCCAGCCACTTATCTGTGTCTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR GCA 72 bp | CGGTGTGCATGGCCATGGTCAAAAACAAGATATTCTTaGGACCAAACCTGGAGAGGAAATGAGGGTCACAGA | + |
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Preference number: 3 (lower is better) Translates to: RCAWPWSKTRYS*DQTWRGNEGHR Trigger: TCTGTGACCCTCATTTCCTCTCCAGGTTTGGTCGCAAGAATATCTTGTTTTTGACCATGGCCATGCACACCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143352.2 |
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| 3UTR-3UTR CAA 90 bp | AGAAGAGAAGACAATCACACTGAACACAAAACACCCACCGATGTGACACGACTGTTCCTTTGGGCTCCCTaGGTCTTGTGTTATATCACG | + |
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Preference number: 3 (lower is better) Translates to: RREDNHTEHKTPTDVTRLFLWAP*VLCYIT Trigger: CGTGATATAACACAAGACCAAGGGAGCCCAAAGGAA...CAGTCGTGTCACATCGGTGGGTGTTTTGTGTTCAGTGTGATTGTCTTCTCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR GCA 72 bp | CACTGTTGTCGGTCACTGACAGTGTTTCTGACAACATaGAGGTTTTCCATTCAGTTCAATCAGCTTCTGGAC | + |
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Preference number: 3 (lower is better) Translates to: HCCRSLTVFLTT*RFSIQFNQLLD Trigger: GTCCAGAAGCTGATTGAACTGAATGGAAAACCTGCATGTTGTCAGAAACACTGTCAGTGACCGACAACAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR CCA 72 bp | GCATTTCTGTTCCCAGGACAAATGCTGCCACGTAGTTaGATATATGTCCCATTCCAACAAGGGTATAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: AFLFPGQMLPRS*IYVPFQQGYRA Trigger: TGCTCTATACCCTTGTTGGAATGGGACATATATCCAACTACGTGGCAGCATTTGTCCTGGGAACAGAAATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143352.2 |
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| 3UTR GCA 72 bp | AGGGAAAGGAGGGAAAAACGGACCTGCTGTTCTATGTaGACCCTTATCAGGTCTTACAAAATAACAAAGCAT | + |
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Preference number: 3 (lower is better) Translates to: RERREKRTCCSM*TLIRSYKITKH Trigger: ATGCTTTGTTATTTTGTAAGACCTGATAAGGGTGCACATAGAACAGCAGGTCCGTTTTTCCCTCCTTTCCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS-3UTR GCA 90 bp | CATCGTGGGGACTCAGGGATGAACCACCAGAGAGCCCCACACAGCACGCCTGGTTCCAGGCAGTTCTCCTaGTCCAGCTGCTCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: HRGDSGMNHQRAPHSTPGSRQFS*SSCSRS Trigger: GGACCTGGAGCAGCTGGAGCAGGAGAACTGCCTGGA...ACCAGGCGTGCTGTGTGGGGCTCTCTGGTGGTTCATCCCTGAGTCCCCACGATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124221.8 |
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| CDS-3UTR GCA 90 bp | TACCTGGCTGTGGGACTGAGCAGTCACAGTCAACACACTGTCTGCTTTATGGACGCTGCCAAGGCGGGATaGTGTGGAGCTGACCCCCAC | + |
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Preference number: 4 (lower is better) Translates to: YLAVGLSSHSQHTVCFMDAAKAG*CGADPH Trigger: GTGGGGGTCAGCTCCACAGCATCCCGCCTTGGCAGC...GTCCATAAAGCAGACAGTGTGTTGACTGTGACTGCTCAGTCCCACAGCCAGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS-3UTR CCA 90 bp | CTGAGGGGCTGTCTCCCCCACCCTCTCAGTCTCCATGCGGACACTGCATTCCATGAAGGAGGTGGTGAGTaGGGCTTTCCAGTCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: LRGCLPHPLSLHADTAFHEGGGE*GFPVIL Trigger: AAGGATGACTGGAAAGCCCCACTCACCACCTCCTTC...ATGGAATGCAGTGTCCGCATGGAGACTGAGAGGGTGGGGGAGACAGCCCCTCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143352.2 |
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| CDS-3UTR TCA 90 bp | CATCGTGGGGACTCAGGGATGAACCACCAGAGAGCCCCACACAGCACGCCTGGTATTTCTGTTCCTGTCTaGGAGCTGTCCCGAAATGAA | + |
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Preference number: 4 (lower is better) Translates to: HRGDSGMNHQRAPHSTPGISVPV*ELSRNE Trigger: TTCATTTCGGGACAGCTCTCAGACAGGAACAGAAAT...ACCAGGCGTGCTGTGTGGGGCTCTCTGGTGGTTCATCCCTGAGTCCCCACGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124221.8 |
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| CDS-3UTR GCA 90 bp | TTAGGGAAAGGAGGGAAAAACGGACCTGCTGTTCTATGTGCACCCTTATCAGGTTCCAGGCAGTTCTCCTaGTCCAGCTGCTCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LGKGGKNGPAVLCAPLSGSRQFS*SSCSRS Trigger: GGACCTGGAGCAGCTGGAGCAGGAGAACTGCCTGGA...ACCTGATAAGGGTGCACATAGAACAGCAGGTCCGTTTTTCCCTCCTTTCCCTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS-3UTR GCA 90 bp | ATGACAGTGCTGGGAGAGGGAAGGGACACTCTGTTATCCATACATTTCCTTCAACGCCGGGACACATGCTaGAACAACAGCCAGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: MTVLGEGRDTLLSIHFLQRRDTC*NNSQAS Trigger: GCTGGCCTGGCTGTTGTTGCAGCATGTGTCCCGGCG...TTGAAGGAAATGTATGGATAACAGAGTGTCCCTTCCCTCTCCCAGCACTGTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS-3UTR CCA 90 bp | TACCTGGCTGTGGGACTGAGCAGTCACAGTCAACACACTGTCTGCTTTATGGACGAAGGAGGTGGTGAGTaGGGCTTTCCAGTCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: YLAVGLSSHSQHTVCFMDEGGGE*GFPVIL Trigger: AAGGATGACTGGAAAGCCCCACTCACCACCTCCTTC...GTCCATAAAGCAGACAGTGTGTTGACTGTGACTGCTCAGTCCCACAGCCAGGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS-3UTR GCA 90 bp | TGTTGTCGGTCACTGACAGTGTTTCTGACAACATGCAGGTTTTCCATTCAGTTCAGGGAGACAGGATGCTaGCAAGGCGGGATGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: CCRSLTVFLTTCRFSIQFRETGC*QGGMLW Trigger: CCACAGCATCCCGCCTTGGCAGCATCCTGTCTCCCT...GAACTGAATGGAAAACCTGCATGTTGTCAGAAACACTGTCAGTGACCGACAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS-3UTR GCA 90 bp | TGTTGTCGGTCACTGACAGTGTTTCTGACAACATGCAGGTTTTCCATTCAGTTCAGTAGGGAGACAGGATaGTGCCAAGGCGGGATGCTG | + |
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Preference number: 4 (lower is better) Translates to: CCRSLTVFLTTCRFSIQFSRETG*CQGGML Trigger: CAGCATCCCGCCTTGGCAGCATCCTGTCTCCCTACT...GAACTGAATGGAAAACCTGCATGTTGTCAGAAACACTGTCAGTGACCGACAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS-3UTR GCA 90 bp | CAACAGAAAGCACTGTTGTCGGTCACTGACAGTGTTTCTGACAACATGCAGGTTCTAAGAGAAGGACACTaGCACCCAGGAAGAGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: QQKALLSVTDSVSDNMQVLREGH*HPGRGN Trigger: GTTCCCTCTTCCTGGGTGGCAGTGTCCTTCTCTTAG...AACCTGCATGTTGTCAGAAACACTGTCAGTGACCGACAACAGTGCTTTCTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR CAA 72 bp | CAGAATTCTGATTTACACAGCAGTGGAAGACAAGCCTaGGCCTCAACAGTAGATTTCTCACAGGGCCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: QNSDLHSSGRQA*ASTVDFSQGLD Trigger: GTCCAGGCCCTGTGAGAAATCTACTGTTGAGGCCAAGGCTTGTCTTCCACTGCTGTGTAAATCAGAATTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS-3UTR GCA 90 bp | AGGACACTGCCCCTGAGCCACAATTATTCCTTTCCTATAAGTTCTGCAGTTAGGGCGGATGATCACCTCTaGCTCTTTAATTCGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: RTLPLSHNYSFPISSAVRADDHL*LFNSAL Trigger: CAAGGCCGAATTAAAGAGGCAGAGGTGATCATCCGC...CCTAACTGCAGAACTTATAGGAAAGGAATAATTGTGGCTCAGGGGCAGTGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS-3UTR CCA 90 bp | AACAATCCCATTGATTTTGGCAGCTTTGCGGATGATCACCTCTGCCTCTTTAATGAAGGAGGTGGTGAGTaGGGCTTTCCAGTCATCCTT | + |
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Preference number: 4 (lower is better) Translates to: NNPIDFGSFADDHLCLFNEGGGE*GFPVIL Trigger: AAGGATGACTGGAAAGCCCCACTCACCACCTCCTTC...ATTAAAGAGGCAGAGGTGATCATCCGCAAAGCTGCCAAAATCAATGGGATTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124221.8 |
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| CDS-3UTR CCA 90 bp | TCTGCAGTTAGGGAAAGGAGGGAAAAACGGACCTGCTGTTCTATGTGCACCCTTCGGTGTGCATGGCCATaGTCAAAAACAAGATATTCT | + |
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Preference number: 4 (lower is better) Translates to: SAVRERREKRTCCSMCTLRCAWP*SKTRYS Trigger: AGAATATCTTGTTTTTGACCATGGCCATGCACACCG...AAGGGTGCACATAGAACAGCAGGTCCGTTTTTCCCTCCTTTCCCTAACTGCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS-3UTR GCA 90 bp | ATGACAGTGCTGGGAGAGGGAAGGGACACTCTGTTATCCATACATTTCCTTCAATCCCAGGACAAATGCTaGCACGTAGTTGGATATATG | + |
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Preference number: 4 (lower is better) Translates to: MTVLGEGRDTLLSIHFLQSQDKC*HVVGYM Trigger: CATATATCCAACTACGTGGCAGCATTTGTCCTGGGA...TTGAAGGAAATGTATGGATAACAGAGTGTCCCTTCCCTCTCCCAGCACTGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS-3UTR GCA 90 bp | AGGACACTGCCCCTGAGCCACAATTATTCCTTTCCTATAAGTTCTGCAGTTAGGTGTTCCCAGGACAAATaGTGCCACGTAGTTGGATAT | + |
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Preference number: 4 (lower is better) Translates to: RTLPLSHNYSFPISSAVRCSQDK*CHVVGY Trigger: ATATCCAACTACGTGGCAGCATTTGTCCTGGGAACA...CCTAACTGCAGAACTTATAGGAAAGGAATAATTGTGGCTCAGGGGCAGTGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR CAA 72 bp | TCGAAGATAGTGGAAGGTGCAACAATCCCATTGATTTaGGCAGCTTTGCGGATGATCACCTCTGCCTCTTTA | + |
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Preference number: 4 (lower is better) Translates to: SKIVEGATIPLI*AALRMITSASL Trigger: TAAAGAGGCAGAGGTGATCATCCGCAAAGCTGCCAAAATCAATGGGATTGTTGCACCTTCCACTATCTTCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124221.8 |
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| CDS-3UTR CCA 90 bp | TTAGGGAAAGGAGGGAAAAACGGACCTGCTGTTCTATGTGCACCCTTATCAGGTCGTCTTGTAATTTATTaGTCTCGCTTGGATCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LGKGGKNGPAVLCAPLSGRLVIY*SRLDRR Trigger: TCTTCGATCCAAGCGAGACCAATAAATTACAAGACG...ACCTGATAAGGGTGCACATAGAACAGCAGGTCCGTTTTTCCCTCCTTTCCCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| 3UTR CAA 72 bp | TTGTTAGACACAATGCCAACACAACAGAAAGCACTGTaGTCGGTCACTGACAGTGTTTCTGACAACATGCAG | + |
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Preference number: 4 (lower is better) Translates to: LLDTMPTQQKAL*SVTDSVSDNMQ Trigger: CTGCATGTTGTCAGAAACACTGTCAGTGACCGACAACAGTGCTTTCTGTTGTGTTGGCATTGTGTCTAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS-3UTR GCA 90 bp | TTAGGGAAAGGAGGGAAAAACGGACCTGCTGTTCTATGTGCACCCTTATCAGGTAAAACAAGATATTCTTaGGACCAAACCTGTCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: LGKGGKNGPAVLCAPLSGKTRYS*DQTCLR Trigger: TCTCAGACAGGTTTGGTCGCAAGAATATCTTGTTTT...ACCTGATAAGGGTGCACATAGAACAGCAGGTCCGTTTTTCCCTCCTTTCCCTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS GCA 90 bp | TCCTTGTCGTACTCCCAGCCATCCAGGCAGTTCTCCTGCTCCAGCTaGTCCAGGTCCACGTCCCGTCCCGGCTCCAGCCCTAGCTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: SLSYSQPSRQFSCSS*SRSTSRPGSSPSSE Trigger: CTCTGAGCTAGGGCTGGAGCCGGGACGGGACGTGGACCTGGAGCAGCTGGAGCAGGAGAACTGCCTGGATGGCTGGGAGTACGACAAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076493.11 ENSMUST00000124221.8 |
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| CDS GCA 90 bp | AGGAAGATGTCCTTGTCGTACTCCCAGCCATCCAGGCAGTTCTCCTaGTCCAGCTGCTCCAGGTCCACGTCCCGTCCCGGCTCCAGCCCT | + |
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Preference number: 5 (lower is better) Translates to: RKMSLSYSQPSRQFS*SSCSRSTSRPGSSP Trigger: AGGGCTGGAGCCGGGACGGGACGTGGACCTGGAGCAGCTGGAGCAGGAGAACTGCCTGGATGGCTGGGAGTACGACAAGGACATCTTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076493.11 ENSMUST00000124221.8 |
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| CDS-3UTR CAA 90 bp | CCATCGTGGGGACTCAGGGATGAACCACCAGAGAGCCCCACACAGCACGCCTGGCCTAGCTCAGAGAAGTaGGCGATGGTGGCCAGTCGG | + |
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Preference number: 5 (lower is better) Translates to: PSWGLRDEPPESPTQHAWPSSEK*AMVASR Trigger: CCGACTGGCCACCATCGCCAACTTCTCTGAGCTAGG...CCAGGCGTGCTGTGTGGGGCTCTCTGGTGGTTCATCCCTGAGTCCCCACGATGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124221.8 |
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| CDS-3UTR CAA 90 bp | AGAAGAGAAGACAATCACACTGAACACAAAACACCCACCGATGTGACACGACTGCCTAGCTCAGAGAAGTaGGCGATGGTGGCCAGTCGG | + |
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Preference number: 5 (lower is better) Translates to: RREDNHTEHKTPTDVTRLPSSEK*AMVASR Trigger: CCGACTGGCCACCATCGCCAACTTCTCTGAGCTAGG...CAGTCGTGTCACATCGGTGGGTGTTTTGTGTTCAGTGTGATTGTCTTCTCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS-3UTR CAA 90 bp | ATGACAGTGCTGGGAGAGGGAAGGGACACTCTGTTATCCATACATTTCCTTCAAGACAGGAAGATGTCCTaGTCGTACTCCCAGCCATCC | + |
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Preference number: 5 (lower is better) Translates to: MTVLGEGRDTLLSIHFLQDRKMS*SYSQPS Trigger: GGATGGCTGGGAGTACGACAAGGACATCTTCCTGTC...TTGAAGGAAATGTATGGATAACAGAGTGTCCCTTCCCTCTCCCAGCACTGTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS-3UTR CAA 90 bp | TGCAACAATCCCATTGATTTTGGCAGCTTTGCGGATGATCACCTCTGCCTCTTTGACAGGAAGATGTCCTaGTCGTACTCCCAGCCATCC | + |
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Preference number: 5 (lower is better) Translates to: CNNPIDFGSFADDHLCLFDRKMS*SYSQPS Trigger: GGATGGCTGGGAGTACGACAAGGACATCTTCCTGTC...AAAGAGGCAGAGGTGATCATCCGCAAAGCTGCCAAAATCAATGGGATTGTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124221.8 |
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| CDS-3UTR CAA 90 bp | TTAGGGAAAGGAGGGAAAAACGGACCTGCTGTTCTATGTGCACCCTTATCAGGTTTGATTTTGGCAGCTTaGCGGATGATCACCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LGKGGKNGPAVLCAPLSGLILAA*RMITSA Trigger: GGCAGAGGTGATCATCCGCAAAGCTGCCAAAATCAA...ACCTGATAAGGGTGCACATAGAACAGCAGGTCCGTTTTTCCCTCCTTTCCCTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS CCA 90 bp | GGTCAGCCACAGGATTATAGACATGATGGTGAGGATCCTGATATTTaGTGTTCGGACCAGATCATAAATGTGGTGCGACTGGGGCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: GQPQDYRHDGEDPDI*CSDQIINVVRLGLL Trigger: AAGAAGCCCCAGTCGCACCACATTTATGATCTGGTCCGAACACCAAATATCAGGATCCTCACCATCATGTCTATAATCCTGTGGCTGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS-3UTR CAA 90 bp | ATGACAGTGCTGGGAGAGGGAAGGGACACTCTGTTATCCATACATTTCCTTCAACTCTTTAATTCGGCCTaGAGAGATGAGCCATCGTGG | + |
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Preference number: 5 (lower is better) Translates to: MTVLGEGRDTLLSIHFLQLFNSA*RDEPSW Trigger: CCACGATGGCTCATCTCTCAAGGCCGAATTAAAGAG...TTGAAGGAAATGTATGGATAACAGAGTGTCCCTTCCCTCTCCCAGCACTGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS-3UTR CAA 90 bp | ATGACAGTGCTGGGAGAGGGAAGGGACACTCTGTTATCCATACATTTCCTTCAAGGTGCAACAATCCCATaGATTTTGGCAGCTTTGCGG | + |
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Preference number: 5 (lower is better) Translates to: MTVLGEGRDTLLSIHFLQGATIP*ILAALR Trigger: CCGCAAAGCTGCCAAAATCAATGGGATTGTTGCACC...TTGAAGGAAATGTATGGATAACAGAGTGTCCCTTCCCTCTCCCAGCACTGTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS-3UTR CAA 90 bp | TTAGGGAAAGGAGGGAAAAACGGACCTGCTGTTCTATGTGCACCCTTATCAGGTGTTCACAGAGAAGACTaGTATGAAGCTGAATCCGGT | + |
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Preference number: 5 (lower is better) Translates to: LGKGGKNGPAVLCAPLSGVHRED*YEAESG Trigger: ACCGGATTCAGCTTCATACAAGTCTTCTCTGTGAAC...ACCTGATAAGGGTGCACATAGAACAGCAGGTCCGTTTTTCCCTCCTTTCCCTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS GCA 72 bp | TACTCCCAGCCATCCAGGCAGTTCTCCTGCTCCAGCTaGTCCAGGTCCACGTCCCGTCCCGGCTCCAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: YSQPSRQFSCSS*SRSTSRPGSSP Trigger: AGGGCTGGAGCCGGGACGGGACGTGGACCTGGAGCAGCTGGAGCAGGAGAACTGCCTGGATGGCTGGGAGTA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076493.11 ENSMUST00000124221.8 |
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| CDS GCA 72 bp | TCCTTGTCGTACTCCCAGCCATCCAGGCAGTTCTCCTaGTCCAGCTGCTCCAGGTCCACGTCCCGTCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: SLSYSQPSRQFS*SSCSRSTSRPG Trigger: GCCGGGACGGGACGTGGACCTGGAGCAGCTGGAGCAGGAGAACTGCCTGGATGGCTGGGAGTACGACAAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076493.11 ENSMUST00000124221.8 |
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| CDS GCA 72 bp | TCGTCTCCATCGGGATACTGTGGTTGCGCCACGCGCTaGTCAGGTTCACGGTGTCTGGTATCCGGCAACGGT | + |
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Preference number: 6 (lower is better) Translates to: SSPSGYCGCATR*SGSRCLVSGNG Trigger: ACCGTTGCCGGATACCAGACACCGTGAACCTGAGCAGCGCGTGGCGCAACCACAGTATCCCGATGGAGACGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076493.11 ENSMUST00000124221.8 |
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| CDS CCA 72 bp | GGCCAGTCGGTAGCGGCGGCATTTCTGAGGCACCTCTaGTCCGTCCTTCGTCTCCATCGGGATACTGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: GQSVAAAFLRHL*SVLRLHRDTVV Trigger: AACCACAGTATCCCGATGGAGACGAAGGACGGACCAGAGGTGCCTCAGAAATGCCGCCGCTACCGACTGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076493.11 ENSMUST00000124221.8 |
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| CDS CCA 72 bp | AGTCATCCTTACACACCAGGTCCCACTCTGTCACGATaGTGGACAGGAAGATGTCCTTGTCGTACTCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SHPYTPGPTLSR*WTGRCPCRTPS Trigger: GCTGGGAGTACGACAAGGACATCTTCCTGTCCACCATCGTGACAGAGTGGGACCTGGTGTGTAAGGATGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076493.11 ENSMUST00000124221.8 |
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| CDS TCA 72 bp | TCTTGCGACCAAACCTGTCTGAGAGCTGTCCCGAAATaGAGGAGCCTAAGAGCACACCCACGTAAAAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: SCDQTCLRAVPK*RSLRAHPRKRR Trigger: CCTTCTTTTACGTGGGTGTGCTCTTAGGCTCCTTCATTTCGGGACAGCTCTCAGACAGGTTTGGTCGCAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS CAA 90 bp | AAGCTGAATCCGGTGTGCATGGCCATGGTCAAAAACAAGATATTCTaGCGACCAAACCTGTCTGAGAGCTGTCCCGAAATGAAGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: KLNPVCMAMVKNKIF*RPNLSESCPEMKEP Trigger: AGGCTCCTTCATTTCGGGACAGCTCTCAGACAGGTTTGGTCGCAAGAATATCTTGTTTTTGACCATGGCCATGCACACCGGATTCAGCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS TCA 72 bp | AAGCATTTCTGTTCCTGTCTGAGAGCTGTCCCGAAATaGAGGAGCCTAAGAGCACACCCACGTAAAAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: KHFCSCLRAVPK*RSLRAHPRKRR Trigger: CCTTCTTTTACGTGGGTGTGCTCTTAGGCTCCTTCATTTCGGGACAGCTCTCAGACAGGAACAGAAATGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000124221.8 |
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| CDS CAA 72 bp | GACTGGGGCTTCTTGGAACTATCGTCTTGTAATTTATaGGTCTCGCTTGGATCGAAGATAGTGGAAGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: DWGFLELSSCNL*VSLGSKIVEGA Trigger: TGCACCTTCCACTATCTTCGATCCAAGCGAGACCAATAAATTACAAGACGATAGTTCCAAGAAGCCCCAGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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| CDS CCA 72 bp | CAGGATTATAGACATGATGGTGAGGATCCTGATATTTaGTGTTCGGACCAGATCATAAATGTGGTGCGACTG | + |
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Preference number: 6 (lower is better) Translates to: QDYRHDGEDPDI*CSDQIINVVRL Trigger: CAGTCGCACCACATTTATGATCTGGTCCGAACACCAAATATCAGGATCCTCACCATCATGTCTATAATCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076493.11 |
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