Pregenerated sensors for SLC22A20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037451Ensembl transcript IDs: ENSMUST00000041827.8
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGACAACATGATCTCCTTGGGTCCCTGGAGGATACTTCCCCTTCCTaGGCTTTCTGCTTGGGCTTGGGTGTGGCTCCCCAGCAAAGTCCA | + |
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Preference number: 1 (lower is better) Translates to: GQHDLLGSLEDTSPS*AFCLGLGVAPQQSP Trigger: TGGACTTTGCTGGGGAGCCACACCCAAGCCCAAGCAGAAAGCTCAGGAAGGGGAAGTATCCTCCAGGGACCCAAGGAGATCATGTTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| 3UTR-3UTR TCA 90 bp | ATGATCTCCTTGGGTCCCTGGAGGATACTTCCCCTTCCTGAGCTTTCTGCTTGGCCTCCTAGCACAGGCTaGGCTCAGCGTCAGGGTCCT | + |
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Preference number: 2 (lower is better) Translates to: MISLGPWRILPLPELSAWPPSTG*AQRQGP Trigger: AGGACCCTGACGCTGAGCTCAGCCTGTGCTAGGAGG...CCAAGCAGAAAGCTCAGGAAGGGGAAGTATCCTCCAGGGACCCAAGGAGATCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| 3UTR-3UTR CCA 90 bp | CCCCTTCCTGAGCTTTCTGCTTGGGCTTGGGTGTGGCTCCCCAGCAAAGTCCACTCTCCTAGCAGGACTTaGACACTCCCTCCTAGCACA | + |
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Preference number: 2 (lower is better) Translates to: PLPELSAWAWVWLPSKVHSPSRT*TLPPST Trigger: TGTGCTAGGAGGGAGTGTCCAAGTCCTGCTAGGAGA...GTGGACTTTGCTGGGGAGCCACACCCAAGCCCAAGCAGAAAGCTCAGGAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| 3UTR CAA 90 bp | GCCCTGGACAGTAGTGCTTTTATTGCAGTGGACAACATGATCTCCTaGGGTCCCTGGAGGATACTTCCCCTTCCTGAGCTTTCTGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: ALDSSAFIAVDNMIS*GPWRILPLPELSAW Trigger: CCAAGCAGAAAGCTCAGGAAGGGGAAGTATCCTCCAGGGACCCAAGGAGATCATGTTGTCCACTGCAATAAAAGCACTACTGTCCAGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| 3UTR-3UTR CCA 90 bp | AGTAGTGCTTTTATTGCAGTGGACAACATGATCTCCTTGGGTCCCTGGAGGATAGCTTGGGCTTGGGTGTaGCTCCCCAGCAAAGTCCAC | + |
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Preference number: 2 (lower is better) Translates to: SSAFIAVDNMISLGPWRIAWAWV*LPSKVH Trigger: GTGGACTTTGCTGGGGAGCCACACCCAAGCCCAAGC...TATCCTCCAGGGACCCAAGGAGATCATGTTGTCCACTGCAATAAAAGCACTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| 3UTR-3UTR CCA 90 bp | AGTAGTGCTTTTATTGCAGTGGACAACATGATCTCCTTGGGTCCCTGGAGGATACCTGAGCTTTCTGCTTaGGCTTGGGTGTGGCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: SSAFIAVDNMISLGPWRIPELSA*AWVWLP Trigger: GGGGAGCCACACCCAAGCCCAAGCAGAAAGCTCAGG...TATCCTCCAGGGACCCAAGGAGATCATGTTGTCCACTGCAATAAAAGCACTACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| 3UTR CCA 72 bp | TCCCCAGCAAAGTCCACGATGCCCTCTGGCTTTGCATaGAGTTCTGCACCAGGATCTCCTAGCAGGACTTGG | + |
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Preference number: 3 (lower is better) Translates to: SPAKSTMPSGFA*SSAPGSPSRTW Trigger: CCAAGTCCTGCTAGGAGATCCTGGTGCAGAACTCCATGCAAAGCCAGAGGGCATCGTGGACTTTGCTGGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| 3UTR-3UTR CAA 90 bp | GCCCTGGACAGTAGTGCTTTTATTGCAGTGGACAACATGATCTCCTTGGGTCCCGCTTTCTGCTTGGGCTaGGGTGTGGCTCCCCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: ALDSSAFIAVDNMISLGPAFCLG*GVAPQQ Trigger: TTGCTGGGGAGCCACACCCAAGCCCAAGCAGAAAGC...GGGACCCAAGGAGATCATGTTGTCCACTGCAATAAAAGCACTACTGTCCAGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| 3UTR-3UTR CAA 90 bp | AGTAGTGCTTTTATTGCAGTGGACAACATGATCTCCTTGGGTCCCTGGAGGATACGATGCCCTCTGGCTTaGCATGGAGTTCTGCACCAG | + |
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Preference number: 3 (lower is better) Translates to: SSAFIAVDNMISLGPWRIRCPLA*HGVLHQ Trigger: CTGGTGCAGAACTCCATGCAAAGCCAGAGGGCATCG...TATCCTCCAGGGACCCAAGGAGATCATGTTGTCCACTGCAATAAAAGCACTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| 3UTR TCA 72 bp | CCCTGGACAGTAGTGCTTTTATTGCAGTGGACAACATaGTCTCCTTGGGTCCCTGGAGGATACTTCCCCTTC | + |
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Preference number: 3 (lower is better) Translates to: PWTVVLLLQWTT*SPWVPGGYFPF Trigger: GAAGGGGAAGTATCCTCCAGGGACCCAAGGAGATCATGTTGTCCACTGCAATAAAAGCACTACTGTCCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| 3UTR CCA 72 bp | TTTATTGCAGTGGACAACATGATCTCCTTGGGTCCCTaGAGGATACTTCCCCTTCCTGAGCTTTCTGCTTGG | + |
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Preference number: 3 (lower is better) Translates to: FIAVDNMISLGP*RILPLPELSAW Trigger: CCAAGCAGAAAGCTCAGGAAGGGGAAGTATCCTCCAGGGACCCAAGGAGATCATGTTGTCCACTGCAATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR GCA 90 bp | CCCCTTCCTGAGCTTTCTGCTTGGGCTTGGGTGTGGCTCCCCAGCAAAGTCCACCCAGGTCACGAAGGGTaGGGGCCTCACACACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: PLPELSAWAWVWLPSKVHPGHEG*GPHTPG Trigger: ACCTGGTGTGTGAGGCCCGCACCCTTCGTGACCTGG...GTGGACTTTGCTGGGGAGCCACACCCAAGCCCAAGCAGAAAGCTCAGGAAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR GCA 90 bp | CCCTTCCTGAGCTTTCTGCTTGGGCTTGGGTGTGGCTCCCCAGCAAAGTCCACGGGCAGCCCCCGAAACTaGCAGCTGCAGGTACGACCA | + |
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Preference number: 4 (lower is better) Translates to: PFLSFLLGLGCGSPAKSTGSPRN*QLQVRP Trigger: TGGTCGTACCTGCAGCTGGCAGTTTCGGGGGCTGCC...CGTGGACTTTGCTGGGGAGCCACACCCAAGCCCAAGCAGAAAGCTCAGGAAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR GCA 90 bp | CTAGCAGGACTTGGACACTCCCTCCTAGCACAGGCTGAGCTCAGCGTCAGGGTCTTGCCCAGCGCTGCCTaGACTGTCCGCAAGGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: LAGLGHSLLAQAELSVRVLPSAA*TVRKVC Trigger: GCAGACCTTGCGGACAGTGCAGGCAGCGCTGGGCAA...GACCCTGACGCTGAGCTCAGCCTGTGCTAGGAGGGAGTGTCCAAGTCCTGCTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR GCA 90 bp | CACCAGGATCTCCTAGCAGGACTTGGACACTCCCTCCTAGCACAGGCTGAGCTCTGGCCAGGCAGCCTTTaGCCAGCGCTGCCTGCACTG | + |
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Preference number: 4 (lower is better) Translates to: HQDLLAGLGHSLLAQAELWPGSL*PALPAL Trigger: CAGTGCAGGCAGCGCTGGGCAAAGGCTGCCTGGCCA...GAGCTCAGCCTGTGCTAGGAGGGAGTGTCCAAGTCCTGCTAGGAGATCCTGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR TCA 90 bp | CCCTTCCTGAGCTTTCTGCTTGGGCTTGGGTGTGGCTCCCCAGCAAAGTCCACGCTCCGAGGCGGGCATTaGCAGAAGCAAATCCCATCC | + |
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Preference number: 4 (lower is better) Translates to: PFLSFLLGLGCGSPAKSTLRGGH*QKQIPS Trigger: GGATGGGATTTGCTTCTGTCAATGCCCGCCTCGGAG...CGTGGACTTTGCTGGGGAGCCACACCCAAGCCCAAGCAGAAAGCTCAGGAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR CCA 90 bp | CCCCTTCCTGAGCTTTCTGCTTGGGCTTGGGTGTGGCTCCCCAGCAAAGTCCACCATGGGAGGAGGCGTTaGGTTTCAGAAGGGCCCACT | + |
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Preference number: 4 (lower is better) Translates to: PLPELSAWAWVWLPSKVHHGRRR*VSEGPT Trigger: AGTGGGCCCTTCTGAAACCCAACGCCTCCTCCCATG...GTGGACTTTGCTGGGGAGCCACACCCAAGCCCAAGCAGAAAGCTCAGGAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR GCA 90 bp | CCCTTCCTGAGCTTTCTGCTTGGGCTTGGGTGTGGCTCCCCAGCAAAGTCCACGTGCCGGAGAAGGTCATaGCCATCAGGAAGCGGAAGA | + |
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Preference number: 4 (lower is better) Translates to: PFLSFLLGLGCGSPAKSTCRRRS*PSGSGR Trigger: TCTTCCGCTTCCTGATGGGCATGACCTTCTCCGGCA...CGTGGACTTTGCTGGGGAGCCACACCCAAGCCCAAGCAGAAAGCTCAGGAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR GCA 90 bp | CCAGCAAAGTCCACGATGCCCTCTGGCTTTGCATGGAGTTCTGCACCAGGATCTTGTGGTGATCAGGGGTaGCACCAAGCCTCCGAGGCG | + |
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Preference number: 4 (lower is better) Translates to: PAKSTMPSGFAWSSAPGSCGDQG*HQASEA Trigger: CGCCTCGGAGGCTTGGTGGCACCCCTGATCACCACA...AGATCCTGGTGCAGAACTCCATGCAAAGCCAGAGGGCATCGTGGACTTTGCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR TCA 90 bp | ATGATCTCCTTGGGTCCCTGGAGGATACTTCCCCTTCCTGAGCTTTCTGCTTGGTGCTGGGCCTTGCCGTaGAGGAGGAGCCATCGGGAT | + |
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Preference number: 4 (lower is better) Translates to: MISLGPWRILPLPELSAWCWALP*RRSHRD Trigger: ATCCCGATGGCTCCTCCTTCACGGCAAGGCCCAGCA...CCAAGCAGAAAGCTCAGGAAGGGGAAGTATCCTCCAGGGACCCAAGGAGATCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR TCA 90 bp | CTAGCAGGACTTGGACACTCCCTCCTAGCACAGGCTGAGCTCAGCGTCAGGGTCCCATCCCCATCTGCCTaGTCTCTGTGGGATAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: LAGLGHSLLAQAELSVRVPSPSA*SLWDRV Trigger: AACTCTATCCCACAGAGATCAGGCAGATGGGGATGG...GACCCTGACGCTGAGCTCAGCCTGTGCTAGGAGGGAGTGTCCAAGTCCTGCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR GCA 90 bp | CCAGCAAAGTCCACGATGCCCTCTGGCTTTGCATGGAGTTCTGCACCAGGATCTCTGAGCCCAAACTTCTaGAGGTCCATGGCCAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: PAKSTMPSGFAWSSAPGSLSPNF*RSMARP Trigger: CGGCCTGGCCATGGACCTGCAGAAGTTTGGGCTCAG...AGATCCTGGTGCAGAACTCCATGCAAAGCCAGAGGGCATCGTGGACTTTGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR CCA 90 bp | GACAGTAGTGCTTTTATTGCAGTGGACAACATGATCTCCTTGGGTCCCTGGAGGCCTTGCAGCCCTCGGTaGCCACCCCATGGGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: DSSAFIAVDNMISLGPWRPCSPR*PPHGRR Trigger: CCTCCTCCCATGGGGTGGCCACCGAGGGCTGCAAGG...CCTCCAGGGACCCAAGGAGATCATGTTGTCCACTGCAATAAAAGCACTACTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR CCA 90 bp | CCCTTCCTGAGCTTTCTGCTTGGGCTTGGGTGTGGCTCCCCAGCAAAGTCCACGGGTCCAAGATGGAGTTaGAGGTGCGGACACTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: PFLSFLLGLGCGSPAKSTGPRWS*RCGHLQ Trigger: TTGCAAGTGTCCGCACCTCCAACTCCATCTTGGACC...CGTGGACTTTGCTGGGGAGCCACACCCAAGCCCAAGCAGAAAGCTCAGGAAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| 3UTR CAA 72 bp | GTGGCTCCCCAGCAAAGTCCACGATGCCCTCTGGCTTaGCATGGAGTTCTGCACCAGGATCTCCTAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: VAPQQSPRCPLA*HGVLHQDLLAG Trigger: TCCTGCTAGGAGATCCTGGTGCAGAACTCCATGCAAAGCCAGAGGGCATCGTGGACTTTGCTGGGGAGCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR CCA 90 bp | CACCAGGATCTCCTAGCAGGACTTGGACACTCCCTCCTAGCACAGGCTGAGCTCTTCTGTAGGAAGGTATaGCAAGCCAGCAGCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: HQDLLAGLGHSLLAQAELFCRKV*QASSPQ Trigger: CTGTGGGCTGCTGGCTTGCCATACCTTCCTACAGAA...GAGCTCAGCCTGTGCTAGGAGGGAGTGTCCAAGTCCTGCTAGGAGATCCTGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR GCA 90 bp | CTAGCAGGACTTGGACACTCCCTCCTAGCACAGGCTGAGCTCAGCGTCAGGGTCAGATGGAGTTGGAGGTaGGGACACTTGCAAACTCAT | + |
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Preference number: 4 (lower is better) Translates to: LAGLGHSLLAQAELSVRVRWSWR*GHLQTH Trigger: ATGAGTTTGCAAGTGTCCGCACCTCCAACTCCATCT...GACCCTGACGCTGAGCTCAGCCTGTGCTAGGAGGGAGTGTCCAAGTCCTGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR CCA 90 bp | CTGGACAGTAGTGCTTTTATTGCAGTGGACAACATGATCTCCTTGGGTCCCTGGGCTGGTTCAGGGGTATaGCAGCCCTCAGCCAGACCC | + |
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Preference number: 4 (lower is better) Translates to: LDSSAFIAVDNMISLGPWAGSGV*QPSARP Trigger: GGGTCTGGCTGAGGGCTGCCATACCCCTGAACCAGC...CCAGGGACCCAAGGAGATCATGTTGTCCACTGCAATAAAAGCACTACTGTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR CCA 90 bp | ATGATCTCCTTGGGTCCCTGGAGGATACTTCCCCTTCCTGAGCTTTCTGCTTGGAAATCATCGTGGTGGTaGCGACCAGCATGGCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: MISLGPWRILPLPELSAWKSSWW*RPAWPG Trigger: TCCCGGCCATGCTGGTCGCCACCACCACGATGATTT...CCAAGCAGAAAGCTCAGGAAGGGGAAGTATCCTCCAGGGACCCAAGGAGATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR CCA 90 bp | TGCCCTCTGGCTTTGCATGGAGTTCTGCACCAGGATCTCCTAGCAGGACTTGGACATAAATCATCGTGGTaGTGGCGACCAGCATGGCCG | + |
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Preference number: 4 (lower is better) Translates to: CPLALHGVLHQDLLAGLGHKSSW*WRPAWP Trigger: CGGCCATGCTGGTCGCCACCACCACGATGATTTATG...TCCAAGTCCTGCTAGGAGATCCTGGTGCAGAACTCCATGCAAAGCCAGAGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR TCA 90 bp | CTGGACAGTAGTGCTTTTATTGCAGTGGACAACATGATCTCCTTGGGTCCCTGGGAGGAGCCATCGGGATaGCTCTGGAAGCCACCAAGA | + |
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Preference number: 4 (lower is better) Translates to: LDSSAFIAVDNMISLGPWEEPSG*LWKPPR Trigger: TCTTGGTGGCTTCCAGAGTCATCCCGATGGCTCCTC...CCAGGGACCCAAGGAGATCATGTTGTCCACTGCAATAAAAGCACTACTGTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR TCA 90 bp | TGCCCTCTGGCTTTGCATGGAGTTCTGCACCAGGATCTCCTAGCAGGACTTGGAGAAGCCCCCAGCTGCTaGAGAGAAATTTCTTCACTC | + |
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Preference number: 4 (lower is better) Translates to: CPLALHGVLHQDLLAGLGEAPSC*REISSL Trigger: GAGTGAAGAAATTTCTCTTCAGCAGCTGGGGGCTTC...TCCAAGTCCTGCTAGGAGATCCTGGTGCAGAACTCCATGCAAAGCCAGAGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR CCA 90 bp | CCCTTCCTGAGCTTTCTGCTTGGGCTTGGGTGTGGCTCCCCAGCAAAGTCCACGCATCACAATGGTAGATaGGAAAATGCTTCGGTCGTA | + |
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Preference number: 4 (lower is better) Translates to: PFLSFLLGLGCGSPAKSTHHNGR*ENASVV Trigger: TACGACCGAAGCATTTTCCCATCTACCATTGTGATG...CGTGGACTTTGCTGGGGAGCCACACCCAAGCCCAAGCAGAAAGCTCAGGAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR CCA 90 bp | CCAGCAAAGTCCACGATGCCCTCTGGCTTTGCATGGAGTTCTGCACCAGGATCTTACAGGTGGCAGAACTaGACTGATCTCGCCAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: PAKSTMPSGFAWSSAPGSYRWQN*TDLAKC Trigger: ACACTTGGCGAGATCAGTCCAGTTCTGCCACCTGTA...AGATCCTGGTGCAGAACTCCATGCAAAGCCAGAGGGCATCGTGGACTTTGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR GCA 90 bp | AGTAGTGCTTTTATTGCAGTGGACAACATGATCTCCTTGGGTCCCTGGAGGATAGCAGTGGTGAGGGGGTaGAGCAGCCGTGAAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SSAFIAVDNMISLGPWRIAVVRG*SSREVL Trigger: CAGAACTTCACGGCTGCTGCACCCCCTCACCACTGC...TATCCTCCAGGGACCCAAGGAGATCATGTTGTCCACTGCAATAAAAGCACTACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR TCA 90 bp | CTGGACAGTAGTGCTTTTATTGCAGTGGACAACATGATCTCCTTGGGTCCCTGGGTACCAGGTAGATGCTaGGCCCAAACTTCTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LDSSAFIAVDNMISLGPWVPGRC*AQTSAG Trigger: ACCTGCAGAAGTTTGGGCTCAGCATCTACCTGGTAC...CCAGGGACCCAAGGAGATCATGTTGTCCACTGCAATAAAAGCACTACTGTCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR TCA 90 bp | AGTAGTGCTTTTATTGCAGTGGACAACATGATCTCCTTGGGTCCCTGGAGGATAGGTTTCTTTGAGGGGTaGAGCCCCCAGCTGCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: SSAFIAVDNMISLGPWRIGFFEG*SPQLLK Trigger: CTTCAGCAGCTGGGGGCTTCACCCCTCAAAGAAACC...TATCCTCCAGGGACCCAAGGAGATCATGTTGTCCACTGCAATAAAAGCACTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR GCA 90 bp | TGCCCTCTGGCTTTGCATGGAGTTCTGCACCAGGATCTCCTAGCAGGACTTGGAGACTCGTCTCTCCATTaGAGCAATAGTTTCTACCAG | + |
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Preference number: 4 (lower is better) Translates to: CPLALHGVLHQDLLAGLGDSSLH*SNSFYQ Trigger: CTGGTAGAAACTATTGCTGCAATGGAGAGACGAGTC...TCCAAGTCCTGCTAGGAGATCCTGGTGCAGAACTCCATGCAAAGCCAGAGGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR CCA 90 bp | CTGGACAGTAGTGCTTTTATTGCAGTGGACAACATGATCTCCTTGGGTCCCTGGCAGCCAAGACTGAAGTaGCACCAAAGGATACAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LDSSAFIAVDNMISLGPWQPRLK*HQRIQV Trigger: CACCTGTATCCTTTGGTGCCACTTCAGTCTTGGCTG...CCAGGGACCCAAGGAGATCATGTTGTCCACTGCAATAAAAGCACTACTGTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| 3UTR CAA 72 bp | AGTAGTGCTTTTATTGCAGTGGACAACATGATCTCCTaGGGTCCCTGGAGGATACTTCCCCTTCCTGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: SSAFIAVDNMIS*GPWRILPLPEL Trigger: AAGCTCAGGAAGGGGAAGTATCCTCCAGGGACCCAAGGAGATCATGTTGTCCACTGCAATAAAAGCACTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS GCA 90 bp | CCCCCGAAACTGCCAGCTGCAGGTACGACCACACCAGTGGGGCCTTaGGACCCAACCTGTCAGCAAGACCACCAAACAAGGCGGCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: PPKLPAAGTTTPVGP*DPTCQQDHQTRRLP Trigger: TGGGAGCCGCCTTGTTTGGTGGTCTTGCTGACAGGTTGGGTCGCAAGGCCCCACTGGTGTGGTCGTACCTGCAGCTGGCAGTTTCGGGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS GCA 90 bp | CTGAAGGAGCCCACATACGCTGTGGCAGCCCCCGAAACTGCCAGCTaGAGGTACGACCACACCAGTGGGGCCTTGCGACCCAACCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: LKEPTYAVAAPETAS*RYDHTSGALRPNLS Trigger: TGACAGGTTGGGTCGCAAGGCCCCACTGGTGTGGTCGTACCTGCAGCTGGCAGTTTCGGGGGCTGCCACAGCGTATGTGGGCTCCTTCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS GCA 90 bp | GTAGGCACTGAAGGAGCCCACATACGCTGTGGCAGCCCCCGAAACTaGCAGCTGCAGGTACGACCACACCAGTGGGGCCTTGCGACCCAA | + |
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Preference number: 5 (lower is better) Translates to: VGTEGAHIRCGSPRN*QLQVRPHQWGLATQ Trigger: TTGGGTCGCAAGGCCCCACTGGTGTGGTCGTACCTGCAGCTGGCAGTTTCGGGGGCTGCCACAGCGTATGTGGGCTCCTTCAGTGCCTAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CCA 90 bp | AACCATCCTTGCAGCCCTCGGTGGCCACCCCATGGGAGGAGGCGTTaGGTTTCAGAAGGGCCCACTGAGGTTCTACATAGCGCCGGCACG | + |
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Preference number: 5 (lower is better) Translates to: NHPCSPRWPPHGRRR*VSEGPTEVLHSAGT Trigger: CGTGCCGGCGCTATGTAGAACCTCAGTGGGCCCTTCTGAAACCCAACGCCTCCTCCCATGGGGTGGCCACCGAGGGCTGCAAGGATGGTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CCA 90 bp | GACCACCAAACAAGGCGGCTCCCACCAACACCCCGGACATGTAGATaGACTGAGCCAGGTCACGAAGGGTGCGGGCCTCACACACCAGGT | + |
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Preference number: 5 (lower is better) Translates to: DHQTRRLPPTPRTCR*TEPGHEGCGPHTPG Trigger: ACCTGGTGTGTGAGGCCCGCACCCTTCGTGACCTGGCTCAGTCCATCTACATGTCCGGGGTGTTGGTGGGAGCCGCCTTGTTTGGTGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CCA 90 bp | TGTGGCAGCCCCCGAAACTGCCAGCTGCAGGTACGACCACACCAGTaGGGCCTTGCGACCCAACCTGTCAGCAAGACCACCAAACAAGGC | + |
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Preference number: 5 (lower is better) Translates to: CGSPRNCQLQVRPHQ*GLATQPVSKTTKQG Trigger: GCCTTGTTTGGTGGTCTTGCTGACAGGTTGGGTCGCAAGGCCCCACTGGTGTGGTCGTACCTGCAGCTGGCAGTTTCGGGGGCTGCCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS TCA 90 bp | CGGAGAAGGTCATGCCCATCAGGAAGCGGAAGACGCAGTAGGCACTaGAGGAGCCCACATACGCTGTGGCAGCCCCCGAAACTGCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: RRRSCPSGSGRRSRH*RSPHTLWQPPKLPA Trigger: AGCTGGCAGTTTCGGGGGCTGCCACAGCGTATGTGGGCTCCTTCAGTGCCTACTGCGTCTTCCGCTTCCTGATGGGCATGACCTTCTCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CCA 90 bp | GGAAAATGCTTCGGTCGTAGACCCAACCATCCTTGCAGCCCTCGGTaGCCACCCCATGGGAGGAGGCGTTGGGTTTCAGAAGGGCCCACT | + |
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Preference number: 5 (lower is better) Translates to: GKCFGRRPNHPCSPR*PPHGRRRWVSEGPT Trigger: AGTGGGCCCTTCTGAAACCCAACGCCTCCTCCCATGGGGTGGCCACCGAGGGCTGCAAGGATGGTTGGGTCTACGACCGAAGCATTTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CCA 90 bp | CACCGCCAGGGCCGGATCAGGTATGCCACGCCAGCCAGGATGAGCTaGCCCAAGGTGAAGGAGAAACCCAACAAGATGCCTGCTACTGTA | + |
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Preference number: 5 (lower is better) Translates to: HRQGRIRYATPARMS*PKVKEKPNKMPATV Trigger: TACAGTAGCAGGCATCTTGTTGGGTTTCTCCTTCACCTTGGGCCAGCTCATCCTGGCTGGCGTGGCATACCTGATCCGGCCCTGGCGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR CAA 90 bp | CACCAGGATCTCCTAGCAGGACTTGGACACTCCCTCCTAGCACAGGCTGAGCTCGTAGTTGGCAGGATGTaGGCAGTGGTGAGGGGGTGC | + |
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Preference number: 5 (lower is better) Translates to: HQDLLAGLGHSLLAQAELVVGRM*AVVRGC Trigger: GCACCCCCTCACCACTGCCAACATCCTGCCAACTAC...GAGCTCAGCCTGTGCTAGGAGGGAGTGTCCAAGTCCTGCTAGGAGATCCTGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS TCA 90 bp | TGTAGTTGGCAGGATGTTGGCAGTGGTGAGGGGGTGCAGCAGCCGTaGAGTTCTGTAGGAAGGTATGGCAAGCCAGCAGCCCACAGGGCA | + |
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Preference number: 5 (lower is better) Translates to: CSWQDVGSGEGVQQP*SSVGRYGKPAAHRA Trigger: TGCCCTGTGGGCTGCTGGCTTGCCATACCTTCCTACAGAACTTCACGGCTGCTGCACCCCCTCACCACTGCCAACATCCTGCCAACTACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS GCA 90 bp | TCATCATGGCCACCTTCTGAAGGTTCTGCACAGCTTGCTGGGCCTTaGCGTGAAGGAGGAGCCATCGGGATGACTCTGGAAGCCACCAAG | + |
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Preference number: 5 (lower is better) Translates to: SSWPPSEGSAQLAGP*REGGAIGMTLEATK Trigger: CTTGGTGGCTTCCAGAGTCATCCCGATGGCTCCTCCTTCACGGCAAGGCCCAGCAAGCTGTGCAGAACCTTCAGAAGGTGGCCATGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS GCA 90 bp | AGGTGGCAGAACTGGACTGATCTCGCCAAGTGTGGTGATCAGGGGTaGCACCAAGCCTCCGAGGCGGGCATTGACAGAAGCAAATCCCAT | + |
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Preference number: 5 (lower is better) Translates to: RWQNWTDLAKCGDQG*HQASEAGIDRSKSH Trigger: ATGGGATTTGCTTCTGTCAATGCCCGCCTCGGAGGCTTGGTGGCACCCCTGATCACCACACTTGGCGAGATCAGTCCAGTTCTGCCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS TCA 90 bp | GCGGGTCTCAGTCAGGAAGCAGGCGACAGCCATTCCAGCCAAGACTaGAGTGGCACCAAAGGATACAGGTGGCAGAACTGGACTGATCTC | + |
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Preference number: 5 (lower is better) Translates to: AGLSQEAGDSHSSQD*SGTKGYRWQNWTDL Trigger: GAGATCAGTCCAGTTCTGCCACCTGTATCCTTTGGTGCCACTTCAGTCTTGGCTGGAATGGCTGTCGCCTGCTTCCTGACTGAGACCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR CAA 90 bp | TGCCCTCTGGCTTTGCATGGAGTTCTGCACCAGGATCTCCTAGCAGGACTTGGAAGGTCCAAGATGGAGTaGGAGGTGCGGACACTTGCA | + |
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Preference number: 5 (lower is better) Translates to: CPLALHGVLHQDLLAGLGRSKME*EVRTLA Trigger: TGCAAGTGTCCGCACCTCCAACTCCATCTTGGACCT...TCCAAGTCCTGCTAGGAGATCCTGGTGCAGAACTCCATGCAAAGCCAGAGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR CAA 90 bp | CTAGCAGGACTTGGACACTCCCTCCTAGCACAGGCTGAGCTCAGCGTCAGGGTCTCAGGCATAAACATGTaGGCAATGACCATGAGCCCA | + |
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Preference number: 5 (lower is better) Translates to: LAGLGHSLLAQAELSVRVSGINM*AMTMSP Trigger: TGGGCTCATGGTCATTGCCAACATGTTTATGCCTGA...GACCCTGACGCTGAGCTCAGCCTGTGCTAGGAGGGAGTGTCCAAGTCCTGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS-3UTR CAA 90 bp | ATGATCTCCTTGGGTCCCTGGAGGATACTTCCCCTTCCTGAGCTTTCTGCTTGGCCTCCGAGGCGGGCATaGACAGAAGCAAATCCCATC | + |
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Preference number: 5 (lower is better) Translates to: MISLGPWRILPLPELSAWPPRRA*TEANPI Trigger: GATGGGATTTGCTTCTGTCAATGCCCGCCTCGGAGG...CCAAGCAGAAAGCTCAGGAAGGGGAAGTATCCTCCAGGGACCCAAGGAGATCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CCA 90 bp | GCCTTGTTTGACTCGTCTCTCCATTGCAGCAATAGTTTCTACCAGTaGCACATTGCGGGTCTCAGTCAGGAAGCAGGCGACAGCCATTCC | + |
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Preference number: 5 (lower is better) Translates to: ALFDSSLHCSNSFYQ*HIAGLSQEAGDSHS Trigger: GGAATGGCTGTCGCCTGCTTCCTGACTGAGACCCGCAATGTGCCACTGGTAGAAACTATTGCTGCAATGGAGAGACGAGTCAAACAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS GCA 90 bp | AGGGGTTCTAAAGAGGTCCAAGATGGAGTTGGAGGTGCGGACACTTaGAAACTCATCCTGGATGTAGGAGCTCACCACCTCTGTAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: RGSKEVQDGVGGADT*KLILDVGAHHLCSQ Trigger: CTGACTACAGAGGTGGTGAGCTCCTACATCCAGGATGAGTTTGCAAGTGTCCGCACCTCCAACTCCATCTTGGACCTCTTTAGAACCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS GCA 90 bp | TTCTGTGTCTCTTTTGGAACGGCCTTGTTTGACTCGTCTCTCCATTaGAGCAATAGTTTCTACCAGTGGCACATTGCGGGTCTCAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: FCVSFGTALFDSSLH*SNSFYQWHIAGLSQ Trigger: CTGACTGAGACCCGCAATGTGCCACTGGTAGAAACTATTGCTGCAATGGAGAGACGAGTCAAACAAGGCCGTTCCAAAAGAGACACAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS GCA 72 bp | CCCACATACGCTGTGGCAGCCCCCGAAACTGCCAGCTaGAGGTACGACCACACCAGTGGGGCCTTGCGACCC | + |
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Preference number: 6 (lower is better) Translates to: PTYAVAAPETAS*RYDHTSGALRP Trigger: GGGTCGCAAGGCCCCACTGGTGTGGTCGTACCTGCAGCTGGCAGTTTCGGGGGCTGCCACAGCGTATGTGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CCA 72 bp | ACAAGGCGGCTCCCACCAACACCCCGGACATGTAGATaGACTGAGCCAGGTCACGAAGGGTGCGGGCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: TRRLPPTPRTCR*TEPGHEGCGPH Trigger: GTGAGGCCCGCACCCTTCGTGACCTGGCTCAGTCCATCTACATGTCCGGGGTGTTGGTGGGAGCCGCCTTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CCA 72 bp | CCCCGAAACTGCCAGCTGCAGGTACGACCACACCAGTaGGGCCTTGCGACCCAACCTGTCAGCAAGACCACC | + |
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Preference number: 6 (lower is better) Translates to: PRNCQLQVRPHQ*GLATQPVSKTT Trigger: GGTGGTCTTGCTGACAGGTTGGGTCGCAAGGCCCCACTGGTGTGGTCGTACCTGCAGCTGGCAGTTTCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CCA 72 bp | TGCAGCCCTCGGTGGCCACCCCATGGGAGGAGGCGTTaGGTTTCAGAAGGGCCCACTGAGGTTCTACATAGC | + |
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Preference number: 6 (lower is better) Translates to: CSPRWPPHGRRR*VSEGPTEVLHS Trigger: GCTATGTAGAACCTCAGTGGGCCCTTCTGAAACCCAACGCCTCCTCCCATGGGGTGGCCACCGAGGGCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS GCA 72 bp | CTGCCAGCTGCAGGTACGACCACACCAGTGGGGCCTTaGGACCCAACCTGTCAGCAAGACCACCAAACAAGG | + |
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Preference number: 6 (lower is better) Translates to: LPAAGTTTPVGP*DPTCQQDHQTR Trigger: CCTTGTTTGGTGGTCTTGCTGACAGGTTGGGTCGCAAGGCCCCACTGGTGTGGTCGTACCTGCAGCTGGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS TCA 72 bp | CAGGATGTTGGCAGTGGTGAGGGGGTGCAGCAGCCGTaGAGTTCTGTAGGAAGGTATGGCAAGCCAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: QDVGSGEGVQQP*SSVGRYGKPAA Trigger: GGCTGCTGGCTTGCCATACCTTCCTACAGAACTTCACGGCTGCTGCACCCCCTCACCACTGCCAACATCCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS TCA 72 bp | TCATGCCCATCAGGAAGCGGAAGACGCAGTAGGCACTaGAGGAGCCCACATACGCTGTGGCAGCCCCCGAAA | + |
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Preference number: 6 (lower is better) Translates to: SCPSGSGRRSRH*RSPHTLWQPPK Trigger: TTTCGGGGGCTGCCACAGCGTATGTGGGCTCCTTCAGTGCCTACTGCGTCTTCCGCTTCCTGATGGGCATGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS GCA 72 bp | CGGACATGTAGATGGACTGAGCCAGGTCACGAAGGGTaGGGGCCTCACACACCAGGTCCCACTCCATCACAA | + |
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Preference number: 6 (lower is better) Translates to: RTCRWTEPGHEG*GPHTPGPTPSQ Trigger: TTGTGATGGAGTGGGACCTGGTGTGTGAGGCCCGCACCCTTCGTGACCTGGCTCAGTCCATCTACATGTCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS GCA 72 bp | AACTGGACTGATCTCGCCAAGTGTGGTGATCAGGGGTaGCACCAAGCCTCCGAGGCGGGCATTGACAGAAGC | + |
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Preference number: 6 (lower is better) Translates to: NWTDLAKCGDQG*HQASEAGIDRS Trigger: GCTTCTGTCAATGCCCGCCTCGGAGGCTTGGTGGCACCCCTGATCACCACACTTGGCGAGATCAGTCCAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS GCA 72 bp | CCACCTTCTGAAGGTTCTGCACAGCTTGCTGGGCCTTaGCGTGAAGGAGGAGCCATCGGGATGACTCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: PPSEGSAQLAGP*REGGAIGMTLE Trigger: TTCCAGAGTCATCCCGATGGCTCCTCCTTCACGGCAAGGCCCAGCAAGCTGTGCAGAACCTTCAGAAGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CAA 72 bp | ATTCATCATGGCCACCTTCTGAAGGTTCTGCACAGCTaGCTGGGCCTTGCCGTGAAGGAGGAGCCATCGGGA | + |
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Preference number: 6 (lower is better) Translates to: IHHGHLLKVLHS*LGLAVKEEPSG Trigger: TCCCGATGGCTCCTCCTTCACGGCAAGGCCCAGCAAGCTGTGCAGAACCTTCAGAAGGTGGCCATGATGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS TCA 72 bp | AGTCAGGAAGCAGGCGACAGCCATTCCAGCCAAGACTaGAGTGGCACCAAAGGATACAGGTGGCAGAACTGG | + |
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Preference number: 6 (lower is better) Translates to: SQEAGDSHSSQD*SGTKGYRWQNW Trigger: CCAGTTCTGCCACCTGTATCCTTTGGTGCCACTTCAGTCTTGGCTGGAATGGCTGTCGCCTGCTTCCTGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS GCA 72 bp | CTGGCCCAAGGTGAAGGAGAAACCCAACAAGATGCCTaGTACTGTACGGCCTCTGGTTGGCATCCATTCTAC | + |
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Preference number: 6 (lower is better) Translates to: LAQGEGETQQDA*YCTASGWHPFY Trigger: GTAGAATGGATGCCAACCAGAGGCCGTACAGTAGCAGGCATCTTGTTGGGTTTCTCCTTCACCTTGGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CCA 72 bp | GACTCGTCTCTCCATTGCAGCAATAGTTTCTACCAGTaGCACATTGCGGGTCTCAGTCAGGAAGCAGGCGAC | + |
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Preference number: 6 (lower is better) Translates to: DSSLHCSNSFYQ*HIAGLSQEAGD Trigger: GTCGCCTGCTTCCTGACTGAGACCCGCAATGTGCCACTGGTAGAAACTATTGCTGCAATGGAGAGACGAGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CAA 90 bp | GCCTGCACTGTCCGCAAGGTCTGCAGATCCTCAGGCATAAACATGTaGGCAATGACCATGAGCCCAGCTAGTATGAGGAAGGAGGACACT | + |
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Preference number: 6 (lower is better) Translates to: ACTVRKVCRSSGINM*AMTMSPASMRKEDT Trigger: AGTGTCCTCCTTCCTCATACTAGCTGGGCTCATGGTCATTGCCAACATGTTTATGCCTGAGGATCTGCAGACCTTGCGGACAGTGCAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS GCA 72 bp | AAAGAGGTCCAAGATGGAGTTGGAGGTGCGGACACTTaGAAACTCATCCTGGATGTAGGAGCTCACCACCTC | + |
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Preference number: 6 (lower is better) Translates to: KEVQDGVGGADT*KLILDVGAHHL Trigger: GAGGTGGTGAGCTCCTACATCCAGGATGAGTTTGCAAGTGTCCGCACCTCCAACTCCATCTTGGACCTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CCA 72 bp | ACCCAACAAGATGCCTGCTACTGTACGGCCTCTGGTTaGCATCCATTCTACAACCAGGGAGAGGGAGTTAAG | + |
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Preference number: 6 (lower is better) Translates to: TQQDACYCTASG*HPFYNQGEGVK Trigger: CTTAACTCCCTCTCCCTGGTTGTAGAATGGATGCCAACCAGAGGCCGTACAGTAGCAGGCATCTTGTTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CAA 72 bp | CTGATGGCAGGGGTTCTAAAGAGGTCCAAGATGGAGTaGGAGGTGCGGACACTTGCAAACTCATCCTGGATG | + |
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Preference number: 6 (lower is better) Translates to: LMAGVLKRSKME*EVRTLANSSWM Trigger: CATCCAGGATGAGTTTGCAAGTGTCCGCACCTCCAACTCCATCTTGGACCTCTTTAGAACCCCTGCCATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CCA 72 bp | CTCACACACCAGGTCCCACTCCATCACAATGGTAGATaGGAAAATGCTTCGGTCGTAGACCCAACCATCCTT | + |
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Preference number: 6 (lower is better) Translates to: LTHQVPLHHNGR*ENASVVDPTIL Trigger: AAGGATGGTTGGGTCTACGACCGAAGCATTTTCCCATCTACCATTGTGATGGAGTGGGACCTGGTGTGTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CAA 72 bp | GTCCGCAAGGTCTGCAGATCCTCAGGCATAAACATGTaGGCAATGACCATGAGCCCAGCTAGTATGAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: VRKVCRSSGINM*AMTMSPASMRK Trigger: CTTCCTCATACTAGCTGGGCTCATGGTCATTGCCAACATGTTTATGCCTGAGGATCTGCAGACCTTGCGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CAA 72 bp | CTCTTCTGTTCTGTGTCTCTTTTGGAACGGCCTTGTTaGACTCGTCTCTCCATTGCAGCAATAGTTTCTACC | + |
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Preference number: 6 (lower is better) Translates to: LFCSVSLLERPC*TRLSIAAIVST Trigger: GGTAGAAACTATTGCTGCAATGGAGAGACGAGTCAAACAAGGCCGTTCCAAAAGAGACACAGAACAGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CAA 90 bp | ATTTCTTCACTCTTCTGTTCTGTGTCTCTTTTGGAACGGCCTTGTTaGACTCGTCTCTCCATTGCAGCAATAGTTTCTACCAGTGGCACA | + |
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Preference number: 6 (lower is better) Translates to: ISSLFCSVSLLERPC*TRLSIAAIVSTSGT Trigger: TGTGCCACTGGTAGAAACTATTGCTGCAATGGAGAGACGAGTCAAACAAGGCCGTTCCAAAAGAGACACAGAACAGAAGAGTGAAGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CAA 72 bp | TTCACTCTTCTGTTCTGTGTCTCTTTTGGAACGGCCTaGTTTGACTCGTCTCTCCATTGCAGCAATAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: FTLLFCVSFGTA*FDSSLHCSNSF Trigger: GAAACTATTGCTGCAATGGAGAGACGAGTCAAACAAGGCCGTTCCAAAAGAGACACAGAACAGAAGAGTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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| CDS CAA 90 bp | AGAAATTTCTTCACTCTTCTGTTCTGTGTCTCTTTTGGAACGGCCTaGTTTGACTCGTCTCTCCATTGCAGCAATAGTTTCTACCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: RNFFTLLFCVSFGTA*FDSSLHCSNSFYQW Trigger: CCACTGGTAGAAACTATTGCTGCAATGGAGAGACGAGTCAAACAAGGCCGTTCCAAAAGAGACACAGAACAGAAGAGTGAAGAAATTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041827.8 |
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