RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SLC22A19 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000024757

Ensembl transcript IDs: ENSMUST00000025666.8

Found 18 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp CTCCAGCACTGCCAGCAATTCCAACGACTCCTAAAGCAGTTGCCCTaGTTATGGTGGGGACTAGCTCATTTGCATGTACAAGAGTACTCG +
Preference number: 5 (lower is better)
Translates to: LQHCQQFQRLLKQLP*LWWGLAHLHVQEYS
Trigger: CGAGTACTCTTGTACATGCAAATGAGCTAGTCCCCACCATAATCAGGGCAACTGCTTTAGGAGTCGTTGGAATTGCTGGCAGTGCTGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8
CDS CCA 90 bp CTTGTGGGAATAAGGAGTAAGAACATTGGAACAGAAAGAGCCAGCTaGAGATGGTGCCAGTTTCGAAAAGCAAAAGCCAGGCCTCCCAAC +
Preference number: 5 (lower is better)
Translates to: LVGIRSKNIGTERAS*RWCQFRKAKARPPN
Trigger: GTTGGGAGGCCTGGCTTTTGCTTTTCGAAACTGGCACCATCTCCAGCTGGCTCTTTCTGTTCCAATGTTCTTACTCCTTATTCCCACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8
CDS GCA 90 bp ATAAGGAGTAAGAACATTGGAACAGAAAGAGCCAGCTGGAGATGGTaGCAGTTTCGAAAAGCAAAAGCCAGGCCTCCCAACAGTGTCTGT +
Preference number: 5 (lower is better)
Translates to: IRSKNIGTERASWRW*QFRKAKARPPNSVC
Trigger: ACAGACACTGTTGGGAGGCCTGGCTTTTGCTTTTCGAAACTGGCACCATCTCCAGCTGGCTCTTTCTGTTCCAATGTTCTTACTCCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8
CDS TCA 90 bp CTTTTCCTCTTATTTTCTATATCTTGGATTGAGTCAGGCAGAGGCTaGTTCTTGGTCTCAGGAAGAAGAAGGGCAACGAGGCCACCAAGG +
Preference number: 5 (lower is better)
Translates to: LFLLFSISWIESGRG*FLVSGRRRATRPPR
Trigger: CCTTGGTGGCCTCGTTGCCCTTCTTCTTCCTGAGACCAAGAATCAGCCTCTGCCTGACTCAATCCAAGATATAGAAAATAAGAGGAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8
CDS CCA 90 bp TCATTCTGCGGCCCATGTAGTTCATTGAAAAATTTCCAAGAACATTaGCTGGGATGCACACCACACCATAGAGACACTGCAGTAGGAACA +
Preference number: 5 (lower is better)
Translates to: SFCGPCSSLKNFQEH*LGCTPHHRDTAVGT
Trigger: TGTTCCTACTGCAGTGTCTCTATGGTGTGGTGTGCATCCCAGCCAATGTTCTTGGAAATTTTTCAATGAACTACATGGGCCGCAGAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8
CDS GCA 90 bp GGCCCATGTAGTTCATTGAAAAATTTCCAAGAACATTGGCTGGGATaGACACCACACCATAGAGACACTGCAGTAGGAACACATTATTGC +
Preference number: 5 (lower is better)
Translates to: GPCSSLKNFQEHWLG*TPHHRDTAVGTHYC
Trigger: GCAATAATGTGTTCCTACTGCAGTGTCTCTATGGTGTGGTGTGCATCCCAGCCAATGTTCTTGGAAATTTTTCAATGAACTACATGGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8
CDS TCA 90 bp AGACATGAAAATCAGTTGCGTCATTCTGCGGCCCATGTAGTTCATTaGAAAATTTCCAAGAACATTGGCTGGGATGCACACCACACCATA +
Preference number: 5 (lower is better)
Translates to: RHENQLRHSAAHVVH*KISKNIGWDAHHTI
Trigger: TATGGTGTGGTGTGCATCCCAGCCAATGTTCTTGGAAATTTTTCAATGAACTACATGGGCCGCAGAATGACGCAACTGATTTTCATGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8
CDS TCA 90 bp GAGGCAAAAATACAACAGCCAGAATGGAGATTCCCAACACAGACATaGAAATCAGTTGCGTCATTCTGCGGCCCATGTAGTTCATTGAAA +
Preference number: 5 (lower is better)
Translates to: EAKIQQPEWRFPTQT*KSVASFCGPCSSLK
Trigger: TTTCAATGAACTACATGGGCCGCAGAATGACGCAACTGATTTTCATGTCTGTGTTGGGAATCTCCATTCTGGCTGTTGTATTTTTGCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8
CDS CCA 90 bp AAAGAGCACGTGAAAATGAGCTTCCTCCCAAACTTGTCTGATAAGTaGCCACCCATGATATATCCTATAAAGATACCAGTCATGTATATA +
Preference number: 5 (lower is better)
Translates to: KEHVKMSFLPNLSDK*PPMIYPIKIPVMYI
Trigger: TATATACATGACTGGTATCTTTATAGGATATATCATGGGTGGCCACTTATCAGACAAGTTTGGGAGGAAGCTCATTTTCACGTGCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8
CDS GCA 72 bp AAGAACATTGGAACAGAAAGAGCCAGCTGGAGATGGTaGCAGTTTCGAAAAGCAAAAGCCAGGCCTCCCAAC +
Preference number: 6 (lower is better)
Translates to: KNIGTERASWRW*QFRKAKARPPN
Trigger: GTTGGGAGGCCTGGCTTTTGCTTTTCGAAACTGGCACCATCTCCAGCTGGCTCTTTCTGTTCCAATGTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8
CDS CCA 72 bp CTATATCTTGGATTGAGTCAGGCAGAGGCTGATTCTTaGTCTCAGGAAGAAGAAGGGCAACGAGGCCACCAA +
Preference number: 6 (lower is better)
Translates to: LYLGLSQAEADS*SQEEEGQRGHQ
Trigger: TTGGTGGCCTCGTTGCCCTTCTTCTTCCTGAGACCAAGAATCAGCCTCTGCCTGACTCAATCCAAGATATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8
CDS TCA 72 bp TTATTTTCTATATCTTGGATTGAGTCAGGCAGAGGCTaGTTCTTGGTCTCAGGAAGAAGAAGGGCAACGAGG +
Preference number: 6 (lower is better)
Translates to: LFSISWIESGRG*FLVSGRRRATR
Trigger: CCTCGTTGCCCTTCTTCTTCCTGAGACCAAGAATCAGCCTCTGCCTGACTCAATCCAAGATATAGAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8
CDS GCA 72 bp AGTTCATTGAAAAATTTCCAAGAACATTGGCTGGGATaGACACCACACCATAGAGACACTGCAGTAGGAACA +
Preference number: 6 (lower is better)
Translates to: SSLKNFQEHWLG*TPHHRDTAVGT
Trigger: TGTTCCTACTGCAGTGTCTCTATGGTGTGGTGTGCATCCCAGCCAATGTTCTTGGAAATTTTTCAATGAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8
CDS CAA 72 bp AAATCAGTTGCGTCATTCTGCGGCCCATGTAGTTCATaGAAAAATTTCCAAGAACATTGGCTGGGATGCACA +
Preference number: 6 (lower is better)
Translates to: KSVASFCGPCSS*KNFQEHWLGCT
Trigger: TGTGCATCCCAGCCAATGTTCTTGGAAATTTTTCAATGAACTACATGGGCCGCAGAATGACGCAACTGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8
CDS CCA 72 bp GTGAAAATGAGCTTCCTCCCAAACTTGTCTGATAAGTaGCCACCCATGATATATCCTATAAAGATACCAGTC +
Preference number: 6 (lower is better)
Translates to: VKMSFLPNLSDK*PPMIYPIKIPV
Trigger: GACTGGTATCTTTATAGGATATATCATGGGTGGCCACTTATCAGACAAGTTTGGGAGGAAGCTCATTTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8
CDS CAA 72 bp AGTAAAGAGCACGTGAAAATGAGCTTCCTCCCAAACTaGTCTGATAAGTGGCCACCCATGATATATCCTATA +
Preference number: 6 (lower is better)
Translates to: SKEHVKMSFLPN*SDKWPPMIYPI
Trigger: TATAGGATATATCATGGGTGGCCACTTATCAGACAAGTTTGGGAGGAAGCTCATTTTCACGTGCTCTTTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8
CDS CAA 90 bp GCCATTTTCAGTAAAGAGCACGTGAAAATGAGCTTCCTCCCAAACTaGTCTGATAAGTGGCCACCCATGATATATCCTATAAAGATACCA +
Preference number: 6 (lower is better)
Translates to: AIFSKEHVKMSFLPN*SDKWPPMIYPIKIP
Trigger: TGGTATCTTTATAGGATATATCATGGGTGGCCACTTATCAGACAAGTTTGGGAGGAAGCTCATTTTCACGTGCTCTTTACTGAAAATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8
CDS CCA 72 bp AGACACTGCAGTAGGAACACATTATTGCTTAGGTATTaGATGTTGATAAGCAGGCCCAATAAAGACATCACT +
Preference number: 6 (lower is better)
Translates to: RHCSRNTLLLRY*MLISRPNKDIT
Trigger: AGTGATGTCTTTATTGGGCCTGCTTATCAACATCCAATACCTAAGCAATAATGTGTTCCTACTGCAGTGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000025666.8