Pregenerated sensors for SLC22A18 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000154Ensembl transcript IDs: ENSMUST00000052348.12, ENSMUST00000105917.3, ENSMUST00000141988.8, ENSMUST00000145943.8, ENSMUST00000150791.8
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TACAGCAGGCCACCTAGGGTGGGTCCTAGAGTTCGGGTCAATGGTTaGACAGATGCAGAGAGGCCCAGCATGGTCCCTGTGTCTGAAGCG | + |
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Preference number: 1 (lower is better) Translates to: YSRPPRVGPRVRVNG*TDAERPSMVPVSEA Trigger: CGCTTCAGACACAGGGACCATGCTGGGCCTCTCTGCATCTGTGCAACCATTGACCCGAACTCTAGGACCCACCCTAGGTGGCCTGCTGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
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| 3UTR CCA 90 bp | ACATCAGCGCCATGCCCAGTCCCACAACAGCAAAGACCAGCACACTaGATCGCAGCAAGGCTTCCTCTGGAAAATGGGTGCTCAGCCTCC | + |
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Preference number: 1 (lower is better) Translates to: TSAPCPVPQQQRPAH*IAARLPLENGCSAS Trigger: GGAGGCTGAGCACCCATTTTCCAGAGGAAGCCTTGCTGCGATCCAGTGTGCTGGTCTTTGCTGTTGTGGGACTGGGCATGGCGCTGATGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
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| 3UTR TCA 90 bp | GGCCTTCAGGTCAAATACACTGGCCTTGGTTCCACCCTGAGGAGCTaGCTGGACACTGGCCTCCTTGGTGGTAGCAGGGACACAGGTAAA | + |
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Preference number: 1 (lower is better) Translates to: GLQVKYTGLGSTLRS*LDTGLLGGSRDTGK Trigger: TTTACCTGTGTCCCTGCTACCACCAAGGAGGCCAGTGTCCAGTCAGCTCCTCAGGGTGGAACCAAGGCCAGTGTATTTGACCTGAAGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR CCA 90 bp | GCAAAGACCAGCACACTGGATCGCAGCAAGGCTTCCTCTGGAAAATaGGTGCTCAGCCTCCCAATGACCAGGCCTTGGATCATCATCTGG | + |
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Preference number: 1 (lower is better) Translates to: AKTSTLDRSKASSGK*VLSLPMTRPWIIIW Trigger: CCAGATGATGATCCAAGGCCTGGTCATTGGGAGGCTGAGCACCCATTTTCCAGAGGAAGCCTTGCTGCGATCCAGTGTGCTGGTCTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR TCA 90 bp | ATCGCAGCAAGGCTTCCTCTGGAAAATGGGTGCTCAGCCTCCCAATaGCCAGGCCTTGGATCATCATCTGGAGGATCCCGAAGAAGGACA | + |
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Preference number: 1 (lower is better) Translates to: IAARLPLENGCSASQ*PGLGSSSGGSRRRT Trigger: TGTCCTTCTTCGGGATCCTCCAGATGATGATCCAAGGCCTGGTCATTGGGAGGCTGAGCACCCATTTTCCAGAGGAAGCCTTGCTGCGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR CCA 90 bp | CACAACAGCAAAGACCAGCACACTGGATCGCAGCAAGGCTTCCTCTaGAAAATGGGTGCTCAGCCTCCCAATGACCAGGCCTTGGATCAT | + |
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Preference number: 1 (lower is better) Translates to: HNSKDQHTGSQQGFL*KMGAQPPNDQALDH Trigger: ATGATCCAAGGCCTGGTCATTGGGAGGCTGAGCACCCATTTTCCAGAGGAAGCCTTGCTGCGATCCAGTGTGCTGGTCTTTGCTGTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR-3UTR TCA 90 bp | AGGCCCAGCCGGCCCAGTGCTGCGGGCCGCTCTGTGGGCGCTGTCAGATCAGTGGGCAGAGGGTATGCGTaGGGCGAAGAGCAGGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: RPSRPSAAGRSVGAVRSVGRGYA*GEEQED Trigger: GTCTTCCTGCTCTTCGCCTCACGCATACCCTCTGCC...CACTGATCTGACAGCGCCCACAGAGCGGCCCGCAGCACTGGGCCGGCTGGGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
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| 3UTR-3UTR TCA 90 bp | GATCCCGAAGAAGGACATGAGGTAGCCAGCCTGTGCAGCCTCCAGCTGGAAGAACAGCTCCTAGGAGGGTaGCCACAAAAGCCAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: DPEEGHEVASLCSLQLEEQLLGG*PQKPGW Trigger: CCATCCTGGCTTTTGTGGTCACCCTCCTAGGAGCTG...TTCTTCCAGCTGGAGGCTGCACAGGCTGGCTACCTCATGTCCTTCTTCGGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGCTCAGCCTCCCAATGACCAGGCCTTGGATCATCATCTGGAGGATCCCGAAGAGGTAGCCAGCCTGTaGAGCCTCCAGCTGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: GAQPPNDQALDHHLEDPEEVASL*SLQLEE Trigger: TTCTTCCAGCTGGAGGCTGCACAGGCTGGCTACCTC...TTCGGGATCCTCCAGATGATGATCCAAGGCCTGGTCATTGGGAGGCTGAGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR CAA 90 bp | GCAGAGAGGCCCAGCATGGTCCCTGTGTCTGAAGCGGACACAGCCTaGGTCAGCATGCTGTCTGTGACTACGTTGAGAGTACAGAGACTG | + |
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Preference number: 2 (lower is better) Translates to: AERPSMVPVSEADTA*VSMLSVTTLRVQRL Trigger: CAGTCTCTGTACTCTCAACGTAGTCACAGACAGCATGCTGACCAAGGCTGTGTCCGCTTCAGACACAGGGACCATGCTGGGCCTCTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAAATGGGTGCTCAGCCTCCCAATGACCAGGCCTTGGATCATCATCTGGAGGCAGCTCCTAGGAGGGTaGCCACAAAAGCCAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: GKWVLSLPMTRPWIIIWRQLLGG*PQKPGW Trigger: CCATCCTGGCTTTTGTGGTCACCCTCCTAGGAGCTG...CCTCCAGATGATGATCCAAGGCCTGGTCATTGGGAGGCTGAGCACCCATTTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR-3UTR TCA 90 bp | GCTTCCTCTGGAAAATGGGTGCTCAGCCTCCCAATGACCAGGCCTTGGATCATCCAGCTCCTAGGAGGGTaGCCACAAAAGCCAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: ASSGKWVLSLPMTRPWIIQLLGG*PQKPGW Trigger: CCATCCTGGCTTTTGTGGTCACCCTCCTAGGAGCTG...GATGATCCAAGGCCTGGTCATTGGGAGGCTGAGCACCCATTTTCCAGAGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCCCAATGACCAGGCCTTGGATCATCATCTGGAGGATCCCGAAGAAGGACATTCCACCCTGAGGAGCTaGCTGGACACTGGCCTCCTT | + |
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Preference number: 2 (lower is better) Translates to: PPNDQALDHHLEDPEEGHSTLRS*LDTGLL Trigger: AAGGAGGCCAGTGTCCAGTCAGCTCCTCAGGGTGGA...ATGTCCTTCTTCGGGATCCTCCAGATGATGATCCAAGGCCTGGTCATTGGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR-3UTR TCA 90 bp | TGGAAAATGGGTGCTCAGCCTCCCAATGACCAGGCCTTGGATCATCATCTGGAGGCCTTGGTTCCACCCTaGGGAGCTGACTGGACACTG | + |
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Preference number: 2 (lower is better) Translates to: WKMGAQPPNDQALDHHLEALVPP*GADWTL Trigger: CAGTGTCCAGTCAGCTCCTCAGGGTGGAACCAAGGC...CTCCAGATGATGATCCAAGGCCTGGTCATTGGGAGGCTGAGCACCCATTTTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCCTCCCAATGACCAGGCCTTGGATCATCATCTGGAGGATCCCGAAGAAGGAGGTAGCCAGCCTGTaGAGCCTCCAGCTGGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: LSLPMTRPWIIIWRIPKKEVASL*SLQLEE Trigger: TTCTTCCAGCTGGAGGCTGCACAGGCTGGCTACCTC...CTTCTTCGGGATCCTCCAGATGATGATCCAAGGCCTGGTCATTGGGAGGCTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR-3UTR TCA 90 bp | GCATCAGAAAACAGAAATGGAGCACACTGGACATCAGCGCCATGCCCAGTCCCATCCCGAAGAAGGACATaGGGTAGCCAGCCTGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: ASENRNGAHWTSAPCPVPSRRRT*GSQPVQ Trigger: CTGCACAGGCTGGCTACCTCATGTCCTTCTTCGGGA...TGGGACTGGGCATGGCGCTGATGTCCAGTGTGCTCCATTTCTGTTTTCTGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAGCCTCCCAATGACCAGGCCTTGGATCATCATCTGGAGGATCCCGAAGAAGTGCTCAGCCTCCCAATaGCCAGGCCTTGGATCATCA | + |
|
Preference number: 2 (lower is better) Translates to: LSLPMTRPWIIIWRIPKKCSASQ*PGLGSS Trigger: TGATGATCCAAGGCCTGGTCATTGGGAGGCTGAGCA...CTTCTTCGGGATCCTCCAGATGATGATCCAAGGCCTGGTCATTGGGAGGCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGACCAGCACACTGGATCGCAGCAAGGCTTCCTCTGGAAAATGGGTGCTCAGCTGGAAGTGTGTGCATaGGGGCAGAGGGTATGCGTG | + |
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Preference number: 2 (lower is better) Translates to: KDQHTGSQQGFLWKMGAQLEVCA*GQRVCV Trigger: CACGCATACCCTCTGCCCTCATGCACACACTTCCAG...CTGAGCACCCATTTTCCAGAGGAAGCCTTGCTGCGATCCAGTGTGCTGGTCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGAAAATGGGTGCTCAGCCTCCCAATGACCAGGCCTTGGATCATCATCTGCCACAAAAGCCAGGATaGCAGGACACTGGATCCCGT | + |
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Preference number: 2 (lower is better) Translates to: LWKMGAQPPNDQALDHHLPQKPG*QDTGSR Trigger: ACGGGATCCAGTGTCCTGCCATCCTGGCTTTTGTGG...CAGATGATGATCCAAGGCCTGGTCATTGGGAGGCTGAGCACCCATTTTCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGCTCAGCCTCCCAATGACCAGGCCTTGGATCATCATCTGGAGGATCCCGAATCAGGTCAAATACACTaGCCTTGGTTCCACCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: GAQPPNDQALDHHLEDPESGQIH*PWFHPE Trigger: CTCAGGGTGGAACCAAGGCCAGTGTATTTGACCTGA...TTCGGGATCCTCCAGATGATGATCCAAGGCCTGGTCATTGGGAGGCTGAGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGAAAATGGGTGCTCAGCCTCCCAATGACCAGGCCTTGGATCATCATCTGTCAGGTCAAATACACTaGCCTTGGTTCCACCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: LWKMGAQPPNDQALDHHLSGQIH*PWFHPE Trigger: CTCAGGGTGGAACCAAGGCCAGTGTATTTGACCTGA...CAGATGATGATCCAAGGCCTGGTCATTGGGAGGCTGAGCACCCATTTTCCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR-3UTR CCA 90 bp | AAAGACCAGCACACTGGATCGCAGCAAGGCTTCCTCTGGAAAATGGGTGCTCAGTGTGCAGCCTCCAGCTaGAAGAAGTCCATAGAGATG | + |
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Preference number: 2 (lower is better) Translates to: KDQHTGSQQGFLWKMGAQCAASS*KKSIEM Trigger: CATCTCTATGGACTTCTTCCAGCTGGAGGCTGCACA...CTGAGCACCCATTTTCCAGAGGAAGCCTTGCTGCGATCCAGTGTGCTGGTCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR CAA 90 bp | TCTGAAGCGGACACAGCCTTGGTCAGCATGCTGTCTGTGACTACGTaGAGAGTACAGAGACTGAATACCAGCCCAGGCATCAGAAAACAG | + |
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Preference number: 2 (lower is better) Translates to: SEADTALVSMLSVTT*RVQRLNTSPGIRKQ Trigger: CTGTTTTCTGATGCCTGGGCTGGTATTCAGTCTCTGTACTCTCAACGTAGTCACAGACAGCATGCTGACCAAGGCTGTGTCCGCTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
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| 3UTR TCA 72 bp | GGCTGGAAGTGTGTGCATGAGGGCAGAGGGTATGCGTaGGGCGAAGAGCAGGAAGACACCAGGCAGGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: GWKCVHEGRGYA*GEEQEDTRQGW Trigger: CCAGCCCTGCCTGGTGTCTTCCTGCTCTTCGCCTCACGCATACCCTCTGCCCTCATGCACACACTTCCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
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| 3UTR TCA 72 bp | CCAAGAAGAGTCCTGGGTAGAGGAGCAGACCAGCCGTaGTGCCAGGCCCTGAAGGGAGGCCAGAGATTACCT | + |
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Preference number: 3 (lower is better) Translates to: PRRVLGRGADQP*CQALKGGQRLP Trigger: AGGTAATCTCTGGCCTCCCTTCAGGGCCTGGCATCACGGCTGGTCTGCTCCTCTACCCAGGACTCTTCTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141988.8 |
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| 3UTR GCA 72 bp | CCACCTAGGGTGGGTCCTAGAGTTCGGGTCAATGGTTaGACAGATGCAGAGAGGCCCAGCATGGTCCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: PPRVGPRVRVNG*TDAERPSMVPV Trigger: CACAGGGACCATGCTGGGCCTCTCTGCATCTGTGCAACCATTGACCCGAACTCTAGGACCCACCCTAGGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
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| 3UTR-3UTR CAA 90 bp | CTCAGCCTCCCAATGACCAGGCCTTGGATCATCATCTGGAGGATCCCGAAGAAGTGGACACTGGCCTCCTaGGTGGTAGCAGGGACACAG | + |
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Preference number: 3 (lower is better) Translates to: LSLPMTRPWIIIWRIPKKWTLAS*VVAGTQ Trigger: CTGTGTCCCTGCTACCACCAAGGAGGCCAGTGTCCA...CTTCTTCGGGATCCTCCAGATGATGATCCAAGGCCTGGTCATTGGGAGGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR-3UTR CAA 90 bp | GCTTCCTCTGGAAAATGGGTGCTCAGCCTCCCAATGACCAGGCCTTGGATCATCTGGACACTGGCCTCCTaGGTGGTAGCAGGGACACAG | + |
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Preference number: 3 (lower is better) Translates to: ASSGKWVLSLPMTRPWIIWTLAS*VVAGTQ Trigger: CTGTGTCCCTGCTACCACCAAGGAGGCCAGTGTCCA...GATGATCCAAGGCCTGGTCATTGGGAGGCTGAGCACCCATTTTCCAGAGGAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR CCA 72 bp | AGCACACTGGATCGCAGCAAGGCTTCCTCTGGAAAATaGGTGCTCAGCCTCCCAATGACCAGGCCTTGGATC | + |
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Preference number: 3 (lower is better) Translates to: STLDRSKASSGK*VLSLPMTRPWI Trigger: GATCCAAGGCCTGGTCATTGGGAGGCTGAGCACCCATTTTCCAGAGGAAGCCTTGCTGCGATCCAGTGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR CCA 72 bp | AAAGACCAGCACACTGGATCGCAGCAAGGCTTCCTCTaGAAAATGGGTGCTCAGCCTCCCAATGACCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: KDQHTGSQQGFL*KMGAQPPNDQA Trigger: GGCCTGGTCATTGGGAGGCTGAGCACCCATTTTCCAGAGGAAGCCTTGCTGCGATCCAGTGTGCTGGTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR TCA 72 bp | CTTGGATCATCATCTGGAGGATCCCGAAGAAGGACATaGGGTAGCCAGCCTGTGCAGCCTCCAGCTGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: LGSSSGGSRRRT*GSQPVQPPAGR Trigger: TCTTCCAGCTGGAGGCTGCACAGGCTGGCTACCTCATGTCCTTCTTCGGGATCCTCCAGATGATGATCCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR TCA 72 bp | AGGCTTCCTCTGGAAAATGGGTGCTCAGCCTCCCAATaGCCAGGCCTTGGATCATCATCTGGAGGATCCCGA | + |
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Preference number: 3 (lower is better) Translates to: RLPLENGCSASQ*PGLGSSSGGSR Trigger: TCGGGATCCTCCAGATGATGATCCAAGGCCTGGTCATTGGGAGGCTGAGCACCCATTTTCCAGAGGAAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
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| 3UTR CCA 72 bp | GTTTATTGCCGGACTGGGCCAAGTCACTGGGCTTTGTaGTCACCGGGCTTTTTCTCCCTTCTGGGACAATGG | + |
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Preference number: 3 (lower is better) Translates to: VYCRTGPSHWAL*SPGFFSLLGQW Trigger: CCATTGTCCCAGAAGGGAGAAAAAGCCCGGTGACCACAAAGCCCAGTGACTTGGCCCAGTCCGGCAATAAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
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| 3UTR CCA 72 bp | AGACTGAATACCAGCCCAGGCATCAGAAAACAGAAATaGAGCACACTGGACATCAGCGCCATGCCCAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: RLNTSPGIRKQK*STLDISAMPSP Trigger: GGGACTGGGCATGGCGCTGATGTCCAGTGTGCTCCATTTCTGTTTTCTGATGCCTGGGCTGGTATTCAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
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| 3UTR CCA 72 bp | TTTAAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTaGGCCAAGTCACTGGGCTTTGTGGTCACCGGGCTT | + |
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Preference number: 3 (lower is better) Translates to: FKRKRFLSLLPD*AKSLGFVVTGL Trigger: AAGCCCGGTGACCACAAAGCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
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| CDS-3UTR TCA 90 bp | TTCCTCTGGAAAATGGGTGCTCAGCCTCCCAATGACCAGGCCTTGGATCATCATCGCCAGGAAGGAGAGTaGGAGTGCCGCTCTTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: FLWKMGAQPPNDQALDHHRQEGE*ECRSCP Trigger: GGGGCAAGAGCGGCACTCTCACTCTCCTTCCTGGCG...ATGATGATCCAAGGCCTGGTCATTGGGAGGCTGAGCACCCATTTTCCAGAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
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| 3UTR CAA 72 bp | GTGATGCCAGGCCCTGAAGGGAGGCCAGAGATTACCTaGACCAGGAATACAGGCAGCACTCTAGGCAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: VMPGPEGRPEIT*TRNTGSTLGSS Trigger: ACTGCTGCCTAGAGTGCTGCCTGTATTCCTGGTCAAGGTAATCTCTGGCCTCCCTTCAGGGCCTGGCATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141988.8 |
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| CDS-3UTR TCA 90 bp | TTTAAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCCGCCAGGAAGGAGAGTaGGAGTGCCGCTCTTGCCCC | + |
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Preference number: 4 (lower is better) Translates to: FKRKRFLSLLPDWAKSLGRQEGE*ECRSCP Trigger: GGGGCAAGAGCGGCACTCTCACTCTCCTTCCTGGCG...GCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052348.12 ENSMUST00000145943.8 |
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| CDS-3UTR CCA 90 bp | AAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTTTGACACCAGGCAGGGCTaGGCTACAGGAGGCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: KRKRFLSLLPDWAKSLGFDTRQG*ATGGHQ Trigger: CTGGTGGCCTCCTGTAGCCCAGCCCTGCCTGGTGTC...AAAGCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
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| CDS-3UTR GCA 90 bp | TTTAAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTGCCCCGCACTGGTCTaGGAACCTGCCGAACACAGG | + |
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Preference number: 4 (lower is better) Translates to: FKRKRFLSLLPDWAKSLGCPALV*EPAEHR Trigger: CCTGTGTTCGGCAGGTTCGCAGACCAGTGCGGGGCA...GCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
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| CDS-3UTR CCA 90 bp | AAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTTTGCTCTTGCCCCGCACTaGTCTGCGAACCTGCCGAAC | + |
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Preference number: 4 (lower is better) Translates to: KRKRFLSLLPDWAKSLGFALAPH*SANLPN Trigger: GTTCGGCAGGTTCGCAGACCAGTGCGGGGCAAGAGC...AAAGCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
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| CDS-3UTR TCA 90 bp | AAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTTTGGCCCACCCAACAGCTaGAGCACCCCAAAGGTTGTC | + |
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Preference number: 4 (lower is better) Translates to: KRKRFLSLLPDWAKSLGFGPPNS*STPKVV Trigger: GACAACCTTTGGGGTGCTTCAGCTGTTGGGTGGGCC...AAAGCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
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| CDS-3UTR TCA 90 bp | TTTAAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCGGCAGAGGGTATGCGTaGGGCGAAGAGCAGGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: FKRKRFLSLLPDWAKSLGGRGYA*GEEQED Trigger: GTCTTCCTGCTCTTCGCCTCACGCATACCCTCTGCC...GCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
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| CDS-3UTR TCA 90 bp | AAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTTTTCCACCCTGAGGAGCTaGCTGGACACTGGCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: KRKRFLSLLPDWAKSLGFSTLRS*LDTGLL Trigger: AAGGAGGCCAGTGTCCAGTCAGCTCCTCAGGGTGGA...AAAGCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
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| CDS-3UTR TCA 90 bp | AAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTTTGCCTTGGTTCCACCCTaGGGAGCTGACTGGACACTG | + |
|
Preference number: 4 (lower is better) Translates to: KRKRFLSLLPDWAKSLGFALVPP*GADWTL Trigger: CAGTGTCCAGTCAGCTCCTCAGGGTGGAACCAAGGC...AAAGCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR CCA 90 bp | AAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTTTCAGAGAGGCCCAGCATaGTCCCTGTGTCTGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KRKRFLSLLPDWAKSLGFQRGPA*SLCLKR Trigger: CCGCTTCAGACACAGGGACCATGCTGGGCCTCTCTG...AAAGCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR CCA 90 bp | AAAGACCAGCACACTGGATCGCAGCAAGGCTTCCTCTGGAAAATGGGTGCTCAGTCAGTGATGACCATCTaGGCGGTGGTAGGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KDQHTGSQQGFLWKMGAQSVMTI*AVVGWR Trigger: TCTCCATCCTACCACCGCCCAGATGGTCATCACTGA...CTGAGCACCCATTTTCCAGAGGAAGCCTTGCTGCGATCCAGTGTGCTGGTCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141988.8 ENSMUST00000150791.8 |
||
| CDS-3UTR CCA 90 bp | CCGTATGCGGTGTTAAGGGTCCCGCCAAGTAGGGAGCCGAAGATAATTCCAATGTCAGTGATGACCATCTaGGCGGTGGTAGGATGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PYAVLRVPPSREPKIIPMSVMTI*AVVGWR Trigger: TCTCCATCCTACCACCGCCCAGATGGTCATCACTGA...CATTGGAATTATCTTCGGCTCCCTACTTGGCGGGACCCTTAACACCGCATACGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141988.8 ENSMUST00000150791.8 |
||
| CDS-3UTR TCA 90 bp | TTTAAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCCTGGAAGTGTGTGCATaGGGGCAGAGGGTATGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: FKRKRFLSLLPDWAKSLGLEVCA*GQRVCV Trigger: CACGCATACCCTCTGCCCTCATGCACACACTTCCAG...GCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR TCA 90 bp | TTTAAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCCAGCTCCTAGGAGGGTaGCCACAAAAGCCAGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: FKRKRFLSLLPDWAKSLGQLLGG*PQKPGW Trigger: CCATCCTGGCTTTTGTGGTCACCCTCCTAGGAGCTG...GCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR TCA 90 bp | TTTAAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTCCCGAAGAAGGACATaGGGTAGCCAGCCTGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FKRKRFLSLLPDWAKSLGSRRRT*GSQPVQ Trigger: CTGCACAGGCTGGCTACCTCATGTCCTTCTTCGGGA...GCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR TCA 90 bp | TTTAAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCCATGGTCCCTGTGTCTaGAGCGGACACAGCCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: FKRKRFLSLLPDWAKSLGHGPCV*SGHSLG Trigger: ACCAAGGCTGTGTCCGCTTCAGACACAGGGACCATG...GCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR GCA 90 bp | GGGAGGCCAGAGATTACCTTGACCAGGAATACAGGCAGCACTCTAGGCAGCAGTGGTAGGATGGAGAACTaGATGAAGAGACACGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRPEITLTRNTGSTLGSSGRMEN*MKRHVS Trigger: GCTAACGTGTCTCTTCATGCAGTTCTCCATCCTACC...ACTGCTGCCTAGAGTGCTGCCTGTATTCCTGGTCAAGGTAATCTCTGGCCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCTTCCTCTGGAAAATGGGTGCTCAGCCTCCCAATGACCAGGCCTTGGATCGGTAGGATGGAGAACTaGATGAAGAGACACGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: KASSGKWVLSLPMTRPWIGRMEN*MKRHVS Trigger: GCTAACGTGTCTCTTCATGCAGTTCTCCATCCTACC...GATCCAAGGCCTGGTCATTGGGAGGCTGAGCACCCATTTTCCAGAGGAAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000141988.8 ENSMUST00000145943.8 ENSMUST00000150791.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTTTGAGGTAGCCAGCCTGTaGAGCCTCCAGCTGGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KRKRFLSLLPDWAKSLGFEVASL*SLQLEE Trigger: TTCTTCCAGCTGGAGGCTGCACAGGCTGGCTACCTC...AAAGCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR TCA 90 bp | AAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTTTTGCTCAGCCTCCCAATaGCCAGGCCTTGGATCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KRKRFLSLLPDWAKSLGFCSASQ*PGLGSS Trigger: TGATGATCCAAGGCCTGGTCATTGGGAGGCTGAGCA...AAAGCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR GCA 90 bp | GCATCAGAAAACAGAAATGGAGCACACTGGACATCAGCGCCATGCCCAGTCCCAGGTAGGATGGAGAACTaGATGAAGAGACACGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASENRNGAHWTSAPCPVPGRMEN*MKRHVS Trigger: GCTAACGTGTCTCTTCATGCAGTTCTCCATCCTACC...TGGGACTGGGCATGGCGCTGATGTCCAGTGTGCTCCATTTCTGTTTTCTGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTTTTCAGTGATGACCATCTaGGCGGCTGGAAGTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KRKRFLSLLPDWAKSLGFSVMTI*AAGSVC Trigger: GCACACACTTCCAGCCGCCCAGATGGTCATCACTGA...AAAGCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR CCA 90 bp | AAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTTTCCACAAAAGCCAGGATaGCAGGACACTGGATCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: KRKRFLSLLPDWAKSLGFPQKPG*QDTGSR Trigger: ACGGGATCCAGTGTCCTGCCATCCTGGCTTTTGTGG...AAAGCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR TCA 90 bp | TTTAAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCCACCAAGAAGAGTCCTaGAGGGAGGCCAGAGATTAC | + |
|
Preference number: 4 (lower is better) Translates to: FKRKRFLSLLPDWAKSLGHQEES*REARDY Trigger: GTAATCTCTGGCCTCCCTTCAGGACTCTTCTTGGTG...GCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR GCA 90 bp | TTTAAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCCAATGGTTGCACAGATaGAGAGAGGCCCAGCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FKRKRFLSLLPDWAKSLGQWLHR*REAQHG Trigger: ACCATGCTGGGCCTCTCTGCATCTGTGCAACCATTG...GCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR CCA 90 bp | AAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTTTCAGCAAGGCTTCCTCTaGAAAATGGGTGCTCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRKRFLSLLPDWAKSLGFQQGFL*KMGAQP Trigger: AGGCTGAGCACCCATTTTCCAGAGGAAGCCTTGCTG...AAAGCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR CCA 90 bp | TTTAAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCACCATGAGCTGCACATaGCCAAAGATGGGGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: FKRKRFLSLLPDWAKSLGTMSCT*PKMGTP Trigger: TGGTGTCCCCATCTTTGGCCATGTGCAGCTCATGGT...GCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR CCA 90 bp | TTTAAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTCAGGTCAAATACACTaGCCTTGGTTCCACCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FKRKRFLSLLPDWAKSLGSGQIH*PWFHPE Trigger: CTCAGGGTGGAACCAAGGCCAGTGTATTTGACCTGA...GCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR CCA 90 bp | TTTAAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTGTGCAGCCTCCAGCTaGAAGAAGTCCATAGAGATG | + |
|
Preference number: 4 (lower is better) Translates to: FKRKRFLSLLPDWAKSLGCAASS*KKSIEM Trigger: CATCTCTATGGACTTCTTCCAGCTGGAGGCTGCACA...GCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR CCA 90 bp | TTTAAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCCCTTGGATCATCATCTaGAGGATCCCGAAGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: FKRKRFLSLLPDWAKSLGPWIII*RIPKKD Trigger: GTCCTTCTTCGGGATCCTCCAGATGATGATCCAAGG...GCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR GCA 90 bp | TTTAAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCGGTAGGATGGAGAACTaGATGAAGAGACACGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FKRKRFLSLLPDWAKSLGGRMEN*MKRHVS Trigger: GCTAACGTGTCTCTTCATGCAGTTCTCCATCCTACC...GCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052348.12 ENSMUST00000145943.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTTTTCCCTTCTGGGACAATaGCTTCTTCCAAAGGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: KRKRFLSLLPDWAKSLGFSLLGQ*LLPKDQ Trigger: TTGGTCCTTTGGAAGAAGCCATTGTCCCAGAAGGGA...AAAGCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR CCA 90 bp | AAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTTTATCAGAAAACAGAAATaGAGCACACTGGACATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KRKRFLSLLPDWAKSLGFIRKQK*STLDIS Trigger: GCTGATGTCCAGTGTGCTCCATTTCTGTTTTCTGAT...AAAGCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS TCA 90 bp | GGCCACCAGGAGCAGGTACAGAGCAGAGGCCGCCAGGAAGGAGAGTaGGAGTGCCGCTCTTGCCCCGCACTGGTCTGCGAACCTGCCGAA | + |
|
Preference number: 5 (lower is better) Translates to: GHQEQVQSRGRQEGE*ECRSCPALVCEPAE Trigger: TTCGGCAGGTTCGCAGACCAGTGCGGGGCAAGAGCGGCACTCTCACTCTCCTTCCTGGCGGCCTCTGCTCTGTACCTGCTCCTGGTGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052348.12 ENSMUST00000105917.3 |
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| CDS TCA 90 bp | GGCCACCAGGAGCAGGTACAGAGCAGAGGCCGCCAGGAAGGAGAGTaGGAGTGCCGCTCTTGCCCCGCACTGGTCTGCGAACTGGTAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GHQEQVQSRGRQEGE*ECRSCPALVCELVG Trigger: TCCTACCAGTTCGCAGACCAGTGCGGGGCAAGAGCGGCACTCTCACTCTCCTTCCTGGCGGCCTCTGCTCTGTACCTGCTCCTGGTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
||
| CDS GCA 90 bp | AGGAGAGTGAGAGTGCCGCTCTTGCCCCGCACTGGTCTGCGAACCTaGCGAACACAGGCCCACCCAACAGCTGAAGCACCCCAAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RRVRVPLLPRTGLRT*RTQAHPTAEAPQRL Trigger: CAACCTTTGGGGTGCTTCAGCTGTTGGGTGGGCCTGTGTTCGGCAGGTTCGCAGACCAGTGCGGGGCAAGAGCGGCACTCTCACTCTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052348.12 ENSMUST00000105917.3 |
||
| CDS-3UTR CAA 90 bp | GTAGCAGGGACACAGGTAAAGCTGAGGACAGCTCCTAGGAGGGTGACCACAAAAGTGAGAGTGCCGCTCTaGCCCCGCACTGGTCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: VAGTQVKLRTAPRRVTTKVRVPL*PRTGLR Trigger: TCGCAGACCAGTGCGGGGCAAGAGCGGCACTCTCAC...TTTTGTGGTCACCCTCCTAGGAGCTGTCCTCAGCTTTACCTGTGTCCCTGCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
||
| CDS-3UTR CAA 90 bp | AAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTTTGTGAGAGTGCCGCTCTaGCCCCGCACTGGTCTGCGA | + |
|
Preference number: 5 (lower is better) Translates to: KRKRFLSLLPDWAKSLGFVRVPL*PRTGLR Trigger: TCGCAGACCAGTGCGGGGCAAGAGCGGCACTCTCAC...AAAGCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052348.12 ENSMUST00000145943.8 |
||
| CDS-3UTR CAA 90 bp | TTTAAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCTGGACACTGGCCTCCTaGGTGGTAGCAGGGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: FKRKRFLSLLPDWAKSLGWTLAS*VVAGTQ Trigger: CTGTGTCCCTGCTACCACCAAGGAGGCCAGTGTCCA...GCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS-3UTR CAA 90 bp | TTTAAGAGGAAGAGGTTCTTAAGTTTATTGCCGGACTGGGCCAAGTCACTGGGCGAAGCGGACACAGCCTaGGTCAGCATGCTGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FKRKRFLSLLPDWAKSLGEADTA*VSMLSV Trigger: CACAGACAGCATGCTGACCAAGGCTGTGTCCGCTTC...GCCCAGTGACTTGGCCCAGTCCGGCAATAAACTTAAGAACCTCTTCCTCTTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052348.12 |
||
| CDS CAA 90 bp | GGTACAGAGCAGAGGCCGCCAGGAAGGAGAGTGAGAGTGCCGCTCTaGCCCCGCACTGGTCTGCGAACCTGCCGAACACAGGCCCACCCA | + |
|
Preference number: 6 (lower is better) Translates to: GTEQRPPGRRVRVPL*PRTGLRTCRTQAHP Trigger: TGGGTGGGCCTGTGTTCGGCAGGTTCGCAGACCAGTGCGGGGCAAGAGCGGCACTCTCACTCTCCTTCCTGGCGGCCTCTGCTCTGTACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052348.12 ENSMUST00000105917.3 |
||
| CDS GCA 72 bp | AGAGTGCCGCTCTTGCCCCGCACTGGTCTGCGAACCTaGCGAACACAGGCCCACCCAACAGCTGAAGCACCC | + |
|
Preference number: 6 (lower is better) Translates to: RVPLLPRTGLRT*RTQAHPTAEAP Trigger: GGGTGCTTCAGCTGTTGGGTGGGCCTGTGTTCGGCAGGTTCGCAGACCAGTGCGGGGCAAGAGCGGCACTCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052348.12 ENSMUST00000105917.3 |
||
| CDS CAA 72 bp | CAGAGGCCGCCAGGAAGGAGAGTGAGAGTGCCGCTCTaGCCCCGCACTGGTCTGCGAACCTGCCGAACACAG | + |
|
Preference number: 6 (lower is better) Translates to: QRPPGRRVRVPL*PRTGLRTCRTQ Trigger: CTGTGTTCGGCAGGTTCGCAGACCAGTGCGGGGCAAGAGCGGCACTCTCACTCTCCTTCCTGGCGGCCTCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052348.12 ENSMUST00000105917.3 |
||
| CDS TCA 72 bp | GAGCAGGTACAGAGCAGAGGCCGCCAGGAAGGAGAGTaGGAGTGCCGCTCTTGCCCCGCACTGGTCTGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: EQVQSRGRQEGE*ECRSCPALVCE Trigger: TTCGCAGACCAGTGCGGGGCAAGAGCGGCACTCTCACTCTCCTTCCTGGCGGCCTCTGCTCTGTACCTGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052348.12 ENSMUST00000105917.3 ENSMUST00000145943.8 |
||
| CDS CCA 72 bp | AGGAAGGAGAGTGAGAGTGCCGCTCTTGCCCCGCACTaGTCTGCGAACCTGCCGAACACAGGCCCACCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: RKESESAALAPH*SANLPNTGPPN Trigger: GTTGGGTGGGCCTGTGTTCGGCAGGTTCGCAGACCAGTGCGGGGCAAGAGCGGCACTCTCACTCTCCTTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052348.12 ENSMUST00000105917.3 |
||
| CDS CAA 72 bp | CAGAGGCCGCCAGGAAGGAGAGTGAGAGTGCCGCTCTaGCCCCGCACTGGTCTGCGAACTGGTAGGATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: QRPPGRRVRVPL*PRTGLRTGRME Trigger: CTCCATCCTACCAGTTCGCAGACCAGTGCGGGGCAAGAGCGGCACTCTCACTCTCCTTCCTGGCGGCCTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
||
| CDS CAA 90 bp | GGTACAGAGCAGAGGCCGCCAGGAAGGAGAGTGAGAGTGCCGCTCTaGCCCCGCACTGGTCTGCGAACTGGTAGGATGGAGAACTGCATG | + |
|
Preference number: 6 (lower is better) Translates to: GTEQRPPGRRVRVPL*PRTGLRTGRMENCM Trigger: CATGCAGTTCTCCATCCTACCAGTTCGCAGACCAGTGCGGGGCAAGAGCGGCACTCTCACTCTCCTTCCTGGCGGCCTCTGCTCTGTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
||
| CDS TCA 72 bp | ATGACCATCTGGGCGGTGGTAGGATGGAGAACTGCATaGAGAGACACGTTAGCTCCAGGGCTGCCAGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: MTIWAVVGWRTA*RDTLAPGLPAH Trigger: ATGTGCTGGCAGCCCTGGAGCTAACGTGTCTCTTCATGCAGTTCTCCATCCTACCACCGCCCAGATGGTCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000141988.8 ENSMUST00000150791.8 |
||
| CDS TCA 72 bp | GCACTGGTCTGCGAACTGGTAGGATGGAGAACTGCATaGAGAGACACGTTAGCTCCAGGGCTGCCAGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: ALVCELVGWRTA*RDTLAPGLPAH Trigger: ATGTGCTGGCAGCCCTGGAGCTAACGTGTCTCTTCATGCAGTTCTCCATCCTACCAGTTCGCAGACCAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145943.8 |
||
| CDS TCA 72 bp | GTGTCCGAGACAGATATGGTAGGATGGAGAACTGCATaGAGAGACACGTTAGCTCCAGGGCTGCCAGCACAT | + |
|
Preference number: 6 (lower is better) Translates to: VSETDMVGWRTA*RDTLAPGLPAH Trigger: ATGTGCTGGCAGCCCTGGAGCTAACGTGTCTCTTCATGCAGTTCTCCATCCTACCATATCTGTCTCGGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052348.12 ENSMUST00000105917.3 |
||