Pregenerated sensors for SLC22A13B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000092212Ensembl transcript IDs: ENSMUST00000173185.2
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | ATGCCTACAAAGACCCCAAAGGCAGGTCTGGGAATGCAGCTTGTGTaGCAAAACAGAAACCTGTCCTCTGCTCTTGATAGGCTGGCCCTC | + |
Preference number: 1 (lower is better) Translates to: MPTKTPKAGLGMQLV*QNRNLSSALDRLAL Trigger: GAGGGCCAGCCTATCAAGAGCAGAGGACAGGTTTCTGTTTTGTCACACAAGCTGCATTCCCAGACCTGCCTTTGGGGTCTTTGTAGGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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3UTR TCA 90 bp | TTCAGGGACAGTCTCCCCTCCTCAGTTAAACTTCTGACAACACCTTaGCAGACACCACCCAGAGATGCTCCTCCTTTAGCGATTCCCATC | + |
Preference number: 1 (lower is better) Translates to: FRDSLPSSVKLLTTP*QTPPRDAPPLAIPI Trigger: GATGGGAATCGCTAAAGGAGGAGCATCTCTGGGTGGTGTCTGTCAAGGTGTTGTCAGAAGTTTAACTGAGGAGGGGAGACTGTCCCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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3UTR-3UTR CCA 90 bp | CCGGTCAGGGTGACAATGAAAATTAAGCATTACAGAATGGAACTATCTCTCCTAATAACCCCTAAGAAATaGAAGAGAAAATGCCTACAA | + |
Preference number: 2 (lower is better) Translates to: PVRVTMKIKHYRMELSLLITPKK*KRKCLQ Trigger: TTGTAGGCATTTTCTCTTCCATTTCTTAGGGGTTAT...TAGGAGAGATAGTTCCATTCTGTAATGCTTAATTTTCATTGTCACCCTGACCGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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3UTR-3UTR CAA 90 bp | AGAAAATGCCTACAAAGACCCCAAAGGCAGGTCTGGGAATGCAGCTTGTGTGACACCTGTCCTCTGCTCTaGATAGGCTGGCCCTCAGCA | + |
Preference number: 3 (lower is better) Translates to: RKCLQRPQRQVWECSLCDTCPLL*IGWPSA Trigger: TGCTGAGGGCCAGCCTATCAAGAGCAGAGGACAGGT...GTCACACAAGCTGCATTCCCAGACCTGCCTTTGGGGTCTTTGTAGGCATTTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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3UTR TCA 72 bp | AGTCTCCCCTCCTCAGTTAAACTTCTGACAACACCTTaGCAGACACCACCCAGAGATGCTCCTCCTTTAGCG | + |
Preference number: 3 (lower is better) Translates to: SLPSSVKLLTTP*QTPPRDAPPLA Trigger: CGCTAAAGGAGGAGCATCTCTGGGTGGTGTCTGTCAAGGTGTTGTCAGAAGTTTAACTGAGGAGGGGAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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3UTR GCA 72 bp | AAATGCCTACAAAGACCCCAAAGGCAGGTCTGGGAATaGAGCTTGTGTGACAAAACAGAAACCTGTCCTCTG | + |
Preference number: 3 (lower is better) Translates to: KCLQRPQRQVWE*SLCDKTETCPL Trigger: CAGAGGACAGGTTTCTGTTTTGTCACACAAGCTGCATTCCCAGACCTGCCTTTGGGGTCTTTGTAGGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR TCA 90 bp | AGAAAATGCCTACAAAGACCCCAAAGGCAGGTCTGGGAATGCAGCTTGTGTGACGAGGTGGCCGGAACATaGGGCAGGACTCGGGTCTGC | + |
Preference number: 4 (lower is better) Translates to: RKCLQRPQRQVWECSLCDEVAGT*GRTRVC Trigger: GCAGACCCGAGTCCTGCCTCATGTTCCGGCCACCTC...GTCACACAAGCTGCATTCCCAGACCTGCCTTTGGGGTCTTTGTAGGCATTTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR TCA 90 bp | CAAAGACCCCAAAGGCAGGTCTGGGAATGCAGCTTGTGTGACAAAACAGAAACCCCCCCACTTGGAAGCTaGGGCTGTAGTACACCAGAC | + |
Preference number: 4 (lower is better) Translates to: QRPQRQVWECSLCDKTETPPLGS*GCSTPD Trigger: GTCTGGTGTACTACAGCCTCAGCTTCCAAGTGGGGG...GGTTTCTGTTTTGTCACACAAGCTGCATTCCCAGACCTGCCTTTGGGGTCTTTG 53% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR GCA 90 bp | AGAGAAAATGCCTACAAAGACCCCAAAGGCAGGTCTGGGAATGCAGCTTGTGTGCGACCCTGGAGAACATaGTCACCAACCCCATGCCTG | + |
Preference number: 4 (lower is better) Translates to: RENAYKDPKGRSGNAACVRPWRT*SPTPCL Trigger: CAGGCATGGGGTTGGTGAGCATGTTCTCCAGGGTCG...CACACAAGCTGCATTCCCAGACCTGCCTTTGGGGTCTTTGTAGGCATTTTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR CCA 90 bp | ATACTGCCCATGTTCAGGGACAGTCTCCCCTCCTCAGTTAAACTTCTGACAACAGTGTCCTTCAGGGTCTaGCCCCGGGACTCAGGAAGA | + |
Preference number: 4 (lower is better) Translates to: ILPMFRDSLPSSVKLLTTVSFRV*PRDSGR Trigger: TCTTCCTGAGTCCCGGGGCCAGACCCTGAAGGACAC...TGTTGTCAGAAGTTTAACTGAGGAGGGGAGACTGTCCCTGAACATGGGCAGTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR CCA 90 bp | GGCAGGTCTGGGAATGCAGCTTGTGTGACAAAACAGAAACCTGTCCTCTGCTCTCAGCCACCCTCACACTaGAAGTTCTTCCCGAAGCCT | + |
Preference number: 4 (lower is better) Translates to: GRSGNAACVTKQKPVLCSQPPSH*KFFPKP Trigger: AGGCTTCGGGAAGAACTTCCAGTGTGAGGGTGGCTG...AGAGCAGAGGACAGGTTTCTGTTTTGTCACACAAGCTGCATTCCCAGACCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR TCA 90 bp | AATAGGATACTGCCCATGTTCAGGGACAGTCTCCCCTCCTCAGTTAAACTTCTGAGGATAGTCCCAGCCTaGGTCACAGGCCTGTGTCTC | + |
Preference number: 4 (lower is better) Translates to: NRILPMFRDSLPSSVKLLRIVPA*VTGLCL Trigger: GAGACACAGGCCTGTGACTCAGGCTGGGACTATCCT...CAGAAGTTTAACTGAGGAGGGGAGACTGTCCCTGAACATGGGCAGTATCCTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR TCA 90 bp | AAATGCCTACAAAGACCCCAAAGGCAGGTCTGGGAATGCAGCTTGTGTGACAAAACACATAGGAGATGGTaGAGGCCGCAGCCGAGGCAA | + |
Preference number: 4 (lower is better) Translates to: KCLQRPQRQVWECSLCDKTHRRW*RPQPRQ Trigger: TTGCCTCGGCTGCGGCCTTCACCATCTCCTATGTGT...TTTGTCACACAAGCTGCATTCCCAGACCTGCCTTTGGGGTCTTTGTAGGCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR GCA 90 bp | CCCCAAAGGCAGGTCTGGGAATGCAGCTTGTGTGACAAAACAGAAACCTGTCCTTCAGGAAATTGGGAATaGCCATCAGGATGGTCAACC | + |
Preference number: 4 (lower is better) Translates to: PQRQVWECSLCDKTETCPSGNWE*PSGWST Trigger: GGTTGACCATCCTGATGGGCATTCCCAATTTCCTGA...AGGACAGGTTTCTGTTTTGTCACACAAGCTGCATTCCCAGACCTGCCTTTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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3UTR CAA 72 bp | CTACAAAGACCCCAAAGGCAGGTCTGGGAATGCAGCTaGTGTGACAAAACAGAAACCTGTCCTCTGCTCTTG | + |
Preference number: 4 (lower is better) Translates to: LQRPQRQVWECS*CDKTETCPLLL Trigger: CAAGAGCAGAGGACAGGTTTCTGTTTTGTCACACAAGCTGCATTCCCAGACCTGCCTTTGGGGTCTTTGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR TCA 90 bp | TTTAGCGATTCCCATCCGGTCAGGGTGACAATGAAAATTAAGCATTACAGAATGGGAGGCTGCCAAAGATaGCCATGGGAATCGCCTGGT | + |
Preference number: 4 (lower is better) Translates to: FSDSHPVRVTMKIKHYRMGGCQR*PWESPG Trigger: ACCAGGCGATTCCCATGGTCATCTTTGGCAGCCTCC...CATTCTGTAATGCTTAATTTTCATTGTCACCCTGACCGGATGGGAATCGCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR CCA 90 bp | AGAAAATGCCTACAAAGACCCCAAAGGCAGGTCTGGGAATGCAGCTTGTGTGACAGGACCATGAAGACCTaGCCAAATATGAAGAATGCA | + |
Preference number: 4 (lower is better) Translates to: RKCLQRPQRQVWECSLCDRTMKT*PNMKNA Trigger: TGCATTCTTCATATTTGGCCAGGTCTTCATGGTCCT...GTCACACAAGCTGCATTCCCAGACCTGCCTTTGGGGTCTTTGTAGGCATTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR GCA 90 bp | AAATGCCTACAAAGACCCCAAAGGCAGGTCTGGGAATGCAGCTTGTGTGACAAAGCCAAATATGAAGAATaGAGTCAGGAAATTGGGAAT | + |
Preference number: 4 (lower is better) Translates to: KCLQRPQRQVWECSLCDKAKYEE*SQEIGN Trigger: ATTCCCAATTTCCTGACTGCATTCTTCATATTTGGC...TTTGTCACACAAGCTGCATTCCCAGACCTGCCTTTGGGGTCTTTGTAGGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR CCA 90 bp | TTTAGCGATTCCCATCCGGTCAGGGTGACAATGAAAATTAAGCATTACAGAATGATGCAGTCAGGAAATTaGGAATGCCCATCAGGATGG | + |
Preference number: 4 (lower is better) Translates to: FSDSHPVRVTMKIKHYRMMQSGN*ECPSGW Trigger: CCATCCTGATGGGCATTCCCAATTTCCTGACTGCAT...CATTCTGTAATGCTTAATTTTCATTGTCACCCTGACCGGATGGGAATCGCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR TCA 90 bp | TTTAGCGATTCCCATCCGGTCAGGGTGACAATGAAAATTAAGCATTACAGAATGAGACCTGGCCAAATATaGAGAATGCAGTCAGGAAAT | + |
Preference number: 4 (lower is better) Translates to: FSDSHPVRVTMKIKHYRMRPGQI*RMQSGN Trigger: ATTTCCTGACTGCATTCTTCATATTTGGCCAGGTCT...CATTCTGTAATGCTTAATTTTCATTGTCACCCTGACCGGATGGGAATCGCTAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS CCA 90 bp | GCAGGGAGCCCCTGCTCCAGGTCCTGGAGGGTGTCCTTCAGGGTCTaGCCCCGGGACTCAGGAAGAAGAGCGCACAGTAGGCCTGCTCCA | + |
Preference number: 5 (lower is better) Translates to: AGSPCSRSWRVSFRV*PRDSGRRAHSRPAP Trigger: TGGAGCAGGCCTACTGTGCGCTCTTCTTCCTGAGTCCCGGGGCCAGACCCTGAAGGACACCCTCCAGGACCTGGAGCAGGGGCTCCCTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS CCA 90 bp | GAAGCGGTGGCTCAGGATGTCTTCCAGGCTGGCACTGTCAGGAGGTaGCCGGAACATGAGGCAGGACTCGGGTCTGCCCGCTGTGTCGTT | + |
Preference number: 5 (lower is better) Translates to: EAVAQDVFQAGTVRR*PEHEAGLGSARCVV Trigger: AACGACACAGCGGGCAGACCCGAGTCCTGCCTCATGTTCCGGCCACCTCCTGACAGTGCCAGCCTGGAAGACATCCTGAGCCACCGCTTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS CCA 90 bp | GCTCCAATGGGGAGGCTGCCAAAGATGACCATGGGAATCGCCTGGTaGTACTGTTCCAGCAGCATCACAAGGGGTGTGATGATGCCACCG | + |
Preference number: 5 (lower is better) Translates to: APMGRLPKMTMGIAW*YCSSSITRGVMMPP Trigger: CGGTGGCATCATCACACCCCTTGTGATGCTGCTGGAACAGTACCACCAGGCGATTCCCATGGTCATCTTTGGCAGCCTCCCCATTGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS GCA 90 bp | GACTCGGGTCTGCCCGCTGTGTCGTTGGGGATGCTTATAGCCAGCTaGTCAGCGGCACTTAGGTTGAAAGTGTGGTTCTTAACCCAGGAC | + |
Preference number: 5 (lower is better) Translates to: DSGLPAVSLGMLIAS*SAALRLKVWFLTQD Trigger: GTCCTGGGTTAAGAACCACACTTTCAACCTAAGTGCCGCTGAGCAGCTGGCTATAAGCATCCCCAACGACACAGCGGGCAGACCCGAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS TCA 90 bp | GCAGTCAGGAAATTGGGAATGCCCATCAGGATGGTCAACCGCACCTaGAAGCGACCAAAGTCGCCCACTTCAGCCATGACCTGTGCAAAT | + |
Preference number: 5 (lower is better) Translates to: AVRKLGMPIRMVNRT*KRPKSPTSAMTCAN Trigger: ATTTGCACAGGTCATGGCTGAAGTGGGCGACTTTGGTCGCTTTCAGGTGCGGTTGACCATCCTGATGGGCATTCCCAATTTCCTGACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS TCA 90 bp | CACAGACAGGCCCAAAGACCAGGGCTCCAACAAGAAGTCCAGCCATaGACACCGACTGAGAGGTCCTCTTCAGGTTCTTTCAATCACACA | + |
Preference number: 5 (lower is better) Translates to: HRQAQRPGLQQEVQP*TPTERSSSGSFNHT Trigger: TGTGTGATTGAAAGAACCTGAAGAGGACCTCTCAGTCGGTGTTCATGGCTGGACTTCTTGTTGGAGCCCTGGTCTTTGGGCCTGTCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS TCA 90 bp | CCAAAGACCAGGGCTCCAACAAGAAGTCCAGCCATGAACACCGACTaGGAGGTCCTCTTCAGGTTCTTTCAATCACACACCAGGTCAAAC | + |
Preference number: 5 (lower is better) Translates to: PKTRAPTRSPAMNTD*EVLFRFFQSHTRSN Trigger: GTTTGACCTGGTGTGTGATTGAAAGAACCTGAAGAGGACCTCTCAGTCGGTGTTCATGGCTGGACTTCTTGTTGGAGCCCTGGTCTTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS GCA 90 bp | GTGAGCCTCGTCAAGGACCATGAAGACCTGGCCAAATATGAAGAATaGAGTCAGGAAATTGGGAATGCCCATCAGGATGGTCAACCGCAC | + |
Preference number: 5 (lower is better) Translates to: VSLVKDHEDLAKYEE*SQEIGNAHQDGQPH Trigger: GTGCGGTTGACCATCCTGATGGGCATTCCCAATTTCCTGACTGCATTCTTCATATTTGGCCAGGTCTTCATGGTCCTTGACGAGGCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR CAA 90 bp | ATACTGCCCATGTTCAGGGACAGTCTCCCCTCCTCAGTTAAACTTCTGACAACAGCCAAAGTCCCCCACTaGGAAGCTGAGGCTGTAGTA | + |
Preference number: 5 (lower is better) Translates to: ILPMFRDSLPSSVKLLTTAKVPH*EAEAVV Trigger: TACTACAGCCTCAGCTTCCAAGTGGGGGACTTTGGC...TGTTGTCAGAAGTTTAACTGAGGAGGGGAGACTGTCCCTGAACATGGGCAGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR CAA 90 bp | CTACAAAGACCCCAAAGGCAGGTCTGGGAATGCAGCTTGTGTGACAAAACAGAATCAGCGGCACTTAGGTaGAAAGTGTGGTTCTTAACC | + |
Preference number: 5 (lower is better) Translates to: LQRPQRQVWECSLCDKTESAALR*KVWFLT Trigger: GGTTAAGAACCACACTTTCAACCTAAGTGCCGCTGA...TTCTGTTTTGTCACACAAGCTGCATTCCCAGACCTGCCTTTGGGGTCTTTGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR CAA 90 bp | TTTAGCGATTCCCATCCGGTCAGGGTGACAATGAAAATTAAGCATTACAGAATGCAGGCCTGTGTCTCATaGAAGCGGTGGCTCAGGATG | + |
Preference number: 5 (lower is better) Translates to: FSDSHPVRVTMKIKHYRMQACVS*KRWLRM Trigger: CATCCTGAGCCACCGCTTCAATGAGACACAGGCCTG...CATTCTGTAATGCTTAATTTTCATTGTCACCCTGACCGGATGGGAATCGCTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR CAA 90 bp | CCGGTCAGGGTGACAATGAAAATTAAGCATTACAGAATGGAACTATCTCTCCTACGAAGCCTCCATGTCTaGTCTTTGGGGTGCTGTTTT | + |
Preference number: 5 (lower is better) Translates to: PVRVTMKIKHYRMELSLLRSLHV*SLGCCF Trigger: AAAACAGCACCCCAAAGACAAGACATGGAGGCTTCG...TAGGAGAGATAGTTCCATTCTGTAATGCTTAATTTTCATTGTCACCCTGACCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS-3UTR CAA 90 bp | TTTAGCGATTCCCATCCGGTCAGGGTGACAATGAAAATTAAGCATTACAGAATGAATGCAGTCAGGAAATaGGGAATGCCCATCAGGATG | + |
Preference number: 5 (lower is better) Translates to: FSDSHPVRVTMKIKHYRMNAVRK*GMPIRM Trigger: CATCCTGATGGGCATTCCCAATTTCCTGACTGCATT...CATTCTGTAATGCTTAATTTTCATTGTCACCCTGACCGGATGGGAATCGCTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS CCA 72 bp | CCCTGCTCCAGGTCCTGGAGGGTGTCCTTCAGGGTCTaGCCCCGGGACTCAGGAAGAAGAGCGCACAGTAGG | + |
Preference number: 6 (lower is better) Translates to: PCSRSWRVSFRV*PRDSGRRAHSR Trigger: CCTACTGTGCGCTCTTCTTCCTGAGTCCCGGGGCCAGACCCTGAAGGACACCCTCCAGGACCTGGAGCAGGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS CAA 90 bp | GGTGGCCGGAACATGAGGCAGGACTCGGGTCTGCCCGCTGTGTCGTaGGGGATGCTTATAGCCAGCTGCTCAGCGGCACTTAGGTTGAAA | + |
Preference number: 6 (lower is better) Translates to: GGRNMRQDSGLPAVS*GMLIASCSAALRLK Trigger: TTTCAACCTAAGTGCCGCTGAGCAGCTGGCTATAAGCATCCCCAACGACACAGCGGGCAGACCCGAGTCCTGCCTCATGTTCCGGCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS CAA 72 bp | ACTGGAAGTTCTTCCCGAAGCCTCCATGTCTTGTCTTaGGGGTGCTGTTTTGTGGGACCCTGCAGGGAGCCC | + |
Preference number: 6 (lower is better) Translates to: TGSSSRSLHVLS*GCCFVGPCREP Trigger: GGGCTCCCTGCAGGGTCCCACAAAACAGCACCCCAAAGACAAGACATGGAGGCTTCGGGAAGAACTTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS CAA 90 bp | ATGTACATGATGCCAGCCAGAGTCAGAGTACACAGCTGGCTCCACTaGCGACCCAGCTTCTCCATCATGAGGACACTGAGGAAGCGGCCA | + |
Preference number: 6 (lower is better) Translates to: MYMMPARVRVHSWLH*RPSFSIMRTLRKRP Trigger: TGGCCGCTTCCTCAGTGTCCTCATGATGGAGAAGCTGGGTCGCAAGTGGAGCCAGCTGTGTACTCTGACTCTGGCTGGCATCATGTACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS TCA 72 bp | GCCCAAAGACCAGGGCTCCAACAAGAAGTCCAGCCATaGACACCGACTGAGAGGTCCTCTTCAGGTTCTTTC | + |
Preference number: 6 (lower is better) Translates to: AQRPGLQQEVQP*TPTERSSSGSF Trigger: GAAAGAACCTGAAGAGGACCTCTCAGTCGGTGTTCATGGCTGGACTTCTTGTTGGAGCCCTGGTCTTTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS GCA 72 bp | CTGCCCGCTGTGTCGTTGGGGATGCTTATAGCCAGCTaGTCAGCGGCACTTAGGTTGAAAGTGTGGTTCTTA | + |
Preference number: 6 (lower is better) Translates to: LPAVSLGMLIAS*SAALRLKVWFL Trigger: TAAGAACCACACTTTCAACCTAAGTGCCGCTGAGCAGCTGGCTATAAGCATCCCCAACGACACAGCGGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS TCA 72 bp | AGGGCTCCAACAAGAAGTCCAGCCATGAACACCGACTaGGAGGTCCTCTTCAGGTTCTTTCAATCACACACC | + |
Preference number: 6 (lower is better) Translates to: RAPTRSPAMNTD*EVLFRFFQSHT Trigger: GGTGTGTGATTGAAAGAACCTGAAGAGGACCTCTCAGTCGGTGTTCATGGCTGGACTTCTTGTTGGAGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS TCA 72 bp | CATAGATATCCAGGCCAAAGTCCCCCACTTGGAAGCTaGGGCTGTAGTACACCAGACTGTCCACAAACCAGT | + |
Preference number: 6 (lower is better) Translates to: HRYPGQSPPLGS*GCSTPDCPQTS Trigger: ACTGGTTTGTGGACAGTCTGGTGTACTACAGCCTCAGCTTCCAAGTGGGGGACTTTGGCCTGGATATCTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS GCA 72 bp | CATGAGGACACTGAGGAAGCGGCCAGGCATTTCCACTaGTCCAAATATCAGCTGTGTCACATAGATATCCAG | + |
Preference number: 6 (lower is better) Translates to: HEDTEEAARHFH*SKYQLCHIDIQ Trigger: CTGGATATCTATGTGACACAGCTGATATTTGGAGCAGTGGAAATGCCTGGCCGCTTCCTCAGTGTCCTCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |
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CDS CAA 90 bp | AAATATCAGCTGTGTCACATAGATATCCAGGCCAAAGTCCCCCACTaGGAAGCTGAGGCTGTAGTACACCAGACTGTCCACAAACCAGTC | + |
Preference number: 6 (lower is better) Translates to: KYQLCHIDIQAKVPH*EAEAVVHQTVHKPV Trigger: GACTGGTTTGTGGACAGTCTGGTGTACTACAGCCTCAGCTTCCAAGTGGGGGACTTTGGCCTGGATATCTATGTGACACAGCTGATATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173185.2 |