Pregenerated sensors for SLC22A13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074028Ensembl transcript IDs: ENSMUST00000084797.6
Found 75 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TGGGGTATCCCAGACAGGGAGACTGGTGAGGCCACAACCCCAGAGAGACTGTCGGAAGGGTACTGTCCCTaGTACTCCCTCTGGGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: WGIPDRETGEATTPERLSEGYCP*YSLWAL Trigger: CAGAGCCCAGAGGGAGTATCAGGGACAGTACCCTTC...CGACAGTCTCTCTGGGGTTGTGGCCTCACCAGTCTCCCTGTCTGGGATACCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| 3UTR-3UTR GCA 90 bp | GGATGGGGTATCCCAGACAGGGAGACTGGTGAGGCCACAACCCCAGAGAGACTGGCCGTGGTACTGGGGTaGAGTTTGTGTATGAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: GWGIPDRETGEATTPERLAVVLG*SLCMRS Trigger: ACTTCTCATACACAAACTGCACCCCAGTACCACGGC...CAGTCTCTCTGGGGTTGTGGCCTCACCAGTCTCCCTGTCTGGGATACCCCATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| 3UTR CAA 90 bp | AAGACTGAGAGCGACCCTGACTCAGCCGTGGTACTGGGGTGCAGTTaGTGTATGAGAAGTGTGGAAGAGGGAAGGGTACTGTCCCTGATA | + |
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Preference number: 2 (lower is better) Translates to: KTESDPDSAVVLGCS*CMRSVEEGRVLSLI Trigger: TATCAGGGACAGTACCCTTCCCTCTTCCACACTTCTCATACACAAACTGCACCCCAGTACCACGGCTGAGTCAGGGTCGCTCTCAGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| 3UTR-3UTR CAA 90 bp | GAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGAGAGCGACCCTGACTCACGCTGTCCTCTGCTCTaGATAGGCTGGCCCTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: EATTPERLSEKTESDPDSRCPLL*IGWPSA Trigger: TGCTGAGGGCCAGCCTATCAAGAGCAGAGGACAGCG...TGAGTCAGGGTCGCTCTCAGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| 3UTR TCA 72 bp | GGCTCTGCAAAAGGGAGTAGGGAGCATGAACACGGCTaGTCTGATCCTGTGTGCTACAGATGCCATGTGCGC | + |
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Preference number: 3 (lower is better) Translates to: GSAKGSREHEHG*SDPVCYRCHVR Trigger: GCGCACATGGCATCTGTAGCACACAGGATCAGATCAGCCGTGTTCATGCTCCCTACTCCCTTTTGCAGAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| 3UTR GCA 72 bp | ACTGAGAGCGACCCTGACTCAGCCGTGGTACTGGGGTaGAGTTTGTGTATGAGAAGTGTGGAAGAGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: TESDPDSAVVLG*SLCMRSVEEGR Trigger: CCTTCCCTCTTCCACACTTCTCATACACAAACTGCACCCCAGTACCACGGCTGAGTCAGGGTCGCTCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR GCA 90 bp | TCCCAGACAGGGAGACTGGTGAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACCTGCAGGGAGCCCCTaGTCCAGGTCCTGGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: SQTGRLVRPQPQRDCRRRPAGSP*SRSWRV Trigger: CACCCTCCAGGACCTGGAGCAGGGGCTCCCTGCAGG...TCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTCACCAGTCTCCCTGTCTGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CCA 90 bp | GGTGAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGAGAGCGACCCTGACGTGTCCTTCAGGGTCTaGCCCCGGGTCTCAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: GEATTPERLSEKTESDPDVSFRV*PRVSGS Trigger: GCTTCCTGAGACCCGGGGCCAGACCCTGAAGGACAC...GTCAGGGTCGCTCTCAGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CCA 90 bp | GGATGGGGTATCCCAGACAGGGAGACTGGTGAGGCCACAACCCCAGAGAGACTGGGATGTCTTCCAGGCTaGCACTGTCAGGAGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: GWGIPDRETGEATTPERLGCLPG*HCQEVA Trigger: GGCCACCTCCTGACAGTGCCAGCCTGGAAGACATCC...CAGTCTCTCTGGGGTTGTGGCCTCACCAGTCTCCCTGTCTGGGATACCCCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CCA 90 bp | GAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGAGAGCGACCCTGACTCACCCTGCTCCAGGTCCTaGAGGGTGTCCTTCAGGGTC | + |
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Preference number: 4 (lower is better) Translates to: EATTPERLSEKTESDPDSPCSRS*RVSFRV Trigger: GACCCTGAAGGACACCCTCCAGGACCTGGAGCAGGG...TGAGTCAGGGTCGCTCTCAGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR GCA 90 bp | GGTGAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGAGAGCGACCCTGACCGACCCTGGAGAAGATaGTCACCAACCCCATGCCTG | + |
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Preference number: 4 (lower is better) Translates to: GEATTPERLSEKTESDPDRPWRR*SPTPCL Trigger: CAGGCATGGGGTTGGTGAGCATCTTCTCCAGGGTCG...GTCAGGGTCGCTCTCAGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR GCA 90 bp | GTGAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGAGAGCGACCCTGACTTGTTTTGTGGGACCCTaGAGGGAGCCCCTGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: VRPQPQRDCRRRLRATLTCFVGP*REPLLQ Trigger: CTGGAGCAGGGGCTCCCTGCAGGGTCCCACAAAACA...AGTCAGGGTCGCTCTCAGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR TCA 90 bp | GATGGGGTATCCCAGACAGGGAGACTGGTGAGGCCACAACCCCAGAGAGACTGTCAAGGAGACCAGCCATaGACACCGACTGGGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: DGVSQTGRLVRPQPQRDCQGDQP*TPTGRS Trigger: AGACCTCCCAGTCGGTGTTCATGGCTGGTCTCCTTG...ACAGTCTCTCTGGGGTTGTGGCCTCACCAGTCTCCCTGTCTGGGATACCCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR GCA 90 bp | GTGCTACAGATGCCATGTGCGCTGTCCTCTGCTCTTGATAGGCTGGCCCTCAGCTCAGGAGGGAGGGTCTaGGGCCAATCCAGTCACAGA | + |
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Preference number: 4 (lower is better) Translates to: VLQMPCALSSALDRLALSSGGRV*GQSSHR Trigger: TCTGTGACTGGATTGGCCGCAGACCCTCCCTCCTGA...GCTGAGGGCCAGCCTATCAAGAGCAGAGGACAGCGCACATGGCATCTGTAGCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CCA 90 bp | ACAGGGAGACTGGTGAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGAGAGGCACTGTCAGGAGGTaGCCGGAACATGAGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: TGRLVRPQPQRDCRRRLRGTVRR*PEHEAG Trigger: TCCTGCCTCATGTTCCGGCCACCTCCTGACAGTGCC...TCTCAGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTCACCAGTCTCCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CCA 90 bp | GGTGAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGAGAGCGACCCTGACGGACAGAAGCCACCGTaGAGATTCTGGCAGAACCCA | + |
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Preference number: 4 (lower is better) Translates to: GEATTPERLSEKTESDPDGQKPP*RFWQNP Trigger: TGGGTTCTGCCAGAATCTCCACGGTGGCTTCTGTCC...GTCAGGGTCGCTCTCAGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CCA 90 bp | AGCCGTGGTACTGGGGTGCAGTTTGTGTATGAGAAGTGTGGAAGAGGGAAGGGTGAGCTCCGGGGAAAGTaGCCGGCCGTTCACCAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SRGTGVQFVYEKCGRGKGELRGK*PAVHQG Trigger: GCCTTGGTGAACGGCCGGCCACTTTCCCCGGAGCTC...ACCCTTCCCTCTTCCACACTTCTCATACACAAACTGCACCCCAGTACCACGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR GCA 90 bp | TCCCAGACAGGGAGACTGGTGAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACCTGCTAACACCATCTaGCCAAGGGCAACGTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: SQTGRLVRPQPQRDCRRRPANTI*PRATLL Trigger: GAGCAACGTTGCCCTTGGGCAGATGGTGTTAGCAGG...TCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTCACCAGTCTCCCTGTCTGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR GCA 90 bp | AGATGCCATGTGCGCTGTCCTCTGCTCTTGATAGGCTGGCCCTCAGCAGCCACAAACCCCATGCCTGTTTaGCTGATGATGGTGGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RCHVRCPLLLIGWPSAATNPMPV*LMMVGK Trigger: CTTCCCCACCATCATCAGGCAAACAGGCATGGGGTT...TGTGGCTGCTGAGGGCCAGCCTATCAAGAGCAGAGGACAGCGCACATGGCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR GCA 90 bp | CCAGACAGGGAGACTGGTGAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGTCTTGTCTTTGGGGTaGTGTTTTGTGGGACCCTGC | + |
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Preference number: 4 (lower is better) Translates to: PDRETGEATTPERLSEKTVLSLG*CFVGPC Trigger: GCAGGGTCCCACAAAACAGCACCCCAAAGACAAGAC...AGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTCACCAGTCTCCCTGTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CCA 90 bp | GAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGAGAGCGACCCTGACTCAGCCATGAACACCGACTaGGAGGTCTTCTTCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: EATTPERLSEKTESDPDSAMNTD*EVFFRF Trigger: GAACCTGAAGAAGACCTCCCAGTCGGTGTTCATGGC...TGAGTCAGGGTCGCTCTCAGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CCA 90 bp | GTGCTACAGATGCCATGTGCGCTGTCCTCTGCTCTTGATAGGCTGGCCCTCAGCCAGCCACCCTCACACTaGAAGTTCTTCCCAAAGCCT | + |
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Preference number: 4 (lower is better) Translates to: VLQMPCALSSALDRLALSQPPSH*KFFPKP Trigger: AGGCTTTGGGAAGAACTTCCAGTGTGAGGGTGGCTG...GCTGAGGGCCAGCCTATCAAGAGCAGAGGACAGCGCACATGGCATCTGTAGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CCA 90 bp | CCAGACAGGGAGACTGGTGAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTATGCAGCCAGGAAATTaGGAATGCCCATCAGGATGG | + |
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Preference number: 4 (lower is better) Translates to: PDRETGEATTPERLSEKTMQPGN*ECPSGW Trigger: CCATCCTGATGGGCATTCCCAATTTCCTGGCTGCAT...AGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTCACCAGTCTCCCTGTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CCA 90 bp | ACAGGGAGACTGGTGAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGAGAGTCTCATTGAAGCGGTaGCTCAGGATGTCTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: TGRLVRPQPQRDCRRRLRVSLKR*LRMSSR Trigger: CCTGGAAGACATCCTGAGCCACCGCTTCAATGAGAC...TCTCAGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTCACCAGTCTCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CCA 90 bp | ACAGGGAGACTGGTGAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGAGAAGTAGAGCTCAAAGCTaGACACGAAGGCTGTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TGRLVRPQPQRDCRRRLRSRAQS*TRRLWP Trigger: TGGCCACAGCCTTCGTGTCCAGCTTTGAGCTCTACT...TCTCAGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTCACCAGTCTCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CCA 90 bp | AGCCGTGGTACTGGGGTGCAGTTTGTGTATGAGAAGTGTGGAAGAGGGAAGGGTTTCTCAGGGACCAGCTaGTTCAGGAGCTCCGGGGAA | + |
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Preference number: 4 (lower is better) Translates to: SRGTGVQFVYEKCGRGKGFSGTS*FRSSGE Trigger: TTCCCCGGAGCTCCTGAACCAGCTGGTCCCTGAGAA...ACCCTTCCCTCTTCCACACTTCTCATACACAAACTGCACCCCAGTACCACGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| 3UTR CAA 72 bp | AGCGACCCTGACTCAGCCGTGGTACTGGGGTGCAGTTaGTGTATGAGAAGTGTGGAAGAGGGAAGGGTACTG | + |
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Preference number: 4 (lower is better) Translates to: SDPDSAVVLGCS*CMRSVEEGRVL Trigger: CAGTACCCTTCCCTCTTCCACACTTCTCATACACAAACTGCACCCCAGTACCACGGCTGAGTCAGGGTCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR TCA 90 bp | GAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGAGAGCGACCCTGACTCACAAACCAGACAGCTATaGGAATCAGAGTCACCTTCC | + |
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Preference number: 4 (lower is better) Translates to: EATTPERLSEKTESDPDSQTRQL*ESESPS Trigger: GGAAGGTGACTCTGATTCTCATAGCTGTCTGGTTTG...TGAGTCAGGGTCGCTCTCAGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR GCA 90 bp | GTGCTACAGATGCCATGTGCGCTGTCCTCTGCTCTTGATAGGCTGGCCCTCAGCGCCAGGCATTTCCACTaGTCCAAATATCAGCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: VLQMPCALSSALDRLALSARHFH*SKYQLC Trigger: ACACAGCTGATATTTGGAGCAGTGGAAATGCCTGGC...GCTGAGGGCCAGCCTATCAAGAGCAGAGGACAGCGCACATGGCATCTGTAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CCA 90 bp | GTGAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGAGAGCGACCCTGACTTCTGGACCAGTTGTTTaGCCTCTTCTGTCCTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: VRPQPQRDCRRRLRATLTSGPVV*PLLSFL Trigger: AAGGAAGGACAGAAGAGGCCAAACAACTGGTCCAGA...AGTCAGGGTCGCTCTCAGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR TCA 90 bp | TGGGGTATCCCAGACAGGGAGACTGGTGAGGCCACAACCCCAGAGAGACTGTCGAGACTTGGCCAAATATaGAGAATGCAGCCAGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: WGIPDRETGEATTPERLSRLGQI*RMQPGN Trigger: ATTTCCTGGCTGCATTCTTCATATTTGGCCAAGTCT...CGACAGTCTCTCTGGGGTTGTGGCCTCACCAGTCTCCCTGTCTGGGATACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR GCA 90 bp | AGCCGTGGTACTGGGGTGCAGTTTGTGTATGAGAAGTGTGGAAGAGGGAAGGGTCCAGGAAATTGGGAATaGCCATCAGGATGGTCAACC | + |
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Preference number: 4 (lower is better) Translates to: SRGTGVQFVYEKCGRGKGPGNWE*PSGWST Trigger: GGTTGACCATCCTGATGGGCATTCCCAATTTCCTGG...ACCCTTCCCTCTTCCACACTTCTCATACACAAACTGCACCCCAGTACCACGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CCA 90 bp | GTGCTACAGATGCCATGTGCGCTGTCCTCTGCTCTTGATAGGCTGGCCCTCAGCCTTAGGTTGAAAGTGTaGTTCTTAACCCAGGACACT | + |
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Preference number: 4 (lower is better) Translates to: VLQMPCALSSALDRLALSLRLKV*FLTQDT Trigger: AGTGTCCTGGGTTAAGAACCACACTTTCAACCTAAG...GCTGAGGGCCAGCCTATCAAGAGCAGAGGACAGCGCACATGGCATCTGTAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CCA 90 bp | GTGAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGAGAGCGACCCTGACTCGTGGGAAGATCTCCTaGGATGAAGATGATAATGAT | + |
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Preference number: 4 (lower is better) Translates to: VRPQPQRDCRRRLRATLTRGKIS*DEDDND Trigger: ATCATTATCATCTTCATCCCAGGAGATCTTCCCACG...AGTCAGGGTCGCTCTCAGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR GCA 90 bp | CCAGACAGGGAGACTGGTGAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGCCAAATATGAAGAATaGAGCCAGGAAATTGGGAAT | + |
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Preference number: 4 (lower is better) Translates to: PDRETGEATTPERLSEKTAKYEE*SQEIGN Trigger: ATTCCCAATTTCCTGGCTGCATTCTTCATATTTGGC...AGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTCACCAGTCTCCCTGTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CCA 90 bp | GGATGGGGTATCCCAGACAGGGAGACTGGTGAGGCCACAACCCCAGAGAGACTGCTGAAATCAGGACATTaGTACTTAGTAAAAATCCAG | + |
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Preference number: 4 (lower is better) Translates to: GWGIPDRETGEATTPERLLKSGH*YLVKIQ Trigger: CTGGATTTTTACTAAGTACCAATGTCCTGATTTCAG...CAGTCTCTCTGGGGTTGTGGCCTCACCAGTCTCCCTGTCTGGGATACCCCATCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CCA 90 bp | AGCCGTGGTACTGGGGTGCAGTTTGTGTATGAGAAGTGTGGAAGAGGGAAGGGTAGGACCATGAAGACTTaGCCAAATATGAAGAATGCA | + |
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Preference number: 4 (lower is better) Translates to: SRGTGVQFVYEKCGRGKGRTMKT*PNMKNA Trigger: TGCATTCTTCATATTTGGCCAAGTCTTCATGGTCCT...ACCCTTCCCTCTTCCACACTTCTCATACACAAACTGCACCCCAGTACCACGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS TCA 90 bp | TCAGGATGTCTTCCAGGCTGGCACTGTCAGGAGGTGGCCGGAACATaGGGCAGGACTCGGGTCTGCCCGCTGTGTCGTTGGGGATGCTTA | + |
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Preference number: 5 (lower is better) Translates to: SGCLPGWHCQEVAGT*GRTRVCPLCRWGCL Trigger: TAAGCATCCCCAACGACACAGCGGGCAGACCCGAGTCCTGCCTCATGTTCCGGCCACCTCCTGACAGTGCCAGCCTGGAAGACATCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS GCA 90 bp | CTGGTTCAGGAGCTCCGGGGAAAGTGGCCGGCCGTTCACCAAGGCTaGCTTCTGGACCAGTTGTTTGGCCTCTTCTGTCCTTCCTTGGGA | + |
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Preference number: 5 (lower is better) Translates to: LVQELRGKWPAVHQG*LLDQLFGLFCPSLG Trigger: TCCCAAGGAAGGACAGAAGAGGCCAAACAACTGGTCCAGAAGGCAGCCTTGGTGAACGGCCGGCCACTTTCCCCGGAGCTCCTGAACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS CCA 90 bp | AGGAGCTCCGGGGAAAGTGGCCGGCCGTTCACCAAGGCTGCCTTCTaGACCAGTTGTTTGGCCTCTTCTGTCCTTCCTTGGGACAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: RSSGESGRPFTKAAF*TSCLASSVLPWDRS Trigger: GCTTCTGTCCCAAGGAAGGACAGAAGAGGCCAAACAACTGGTCCAGAAGGCAGCCTTGGTGAACGGCCGGCCACTTTCCCCGGAGCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS TCA 90 bp | GAGCTCAAAGCTGGACACGAAGGCTGTGGCCATGCTTGTGATGCCTaGCAGAAGCACCTGCATCAGGAGGGAGGGTCTGCGGCCAATCCA | + |
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Preference number: 5 (lower is better) Translates to: ELKAGHEGCGHACDA*QKHLHQEGGSAANP Trigger: TGGATTGGCCGCAGACCCTCCCTCCTGATGCAGGTGCTTCTGTCAGGCATCACAAGCATGGCCACAGCCTTCGTGTCCAGCTTTGAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS TCA 90 bp | CCAAGTAGAGCTCAAAGCTGGACACGAAGGCTGTGGCCATGCTTGTaGTGCCTGACAGAAGCACCTGCATCAGGAGGGAGGGTCTGCGGC | + |
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Preference number: 5 (lower is better) Translates to: PSRAQSWTRRLWPCL*CLTEAPASGGRVCG Trigger: GCCGCAGACCCTCCCTCCTGATGCAGGTGCTTCTGTCAGGCATCACAAGCATGGCCACAGCCTTCGTGTCCAGCTTTGAGCTCTACTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CAA 90 bp | ACAGGGAGACTGGTGAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGAGAGGCCAAGACCACGGCTaGTGTTCTCCAAGATGGCCC | + |
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Preference number: 5 (lower is better) Translates to: TGRLVRPQPQRDCRRRLRGQDHG*CSPRWP Trigger: GGGCCATCTTGGAGAACACAAGCCGTGGTCTTGGCC...TCTCAGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTCACCAGTCTCCCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CAA 90 bp | GAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGAGAGCGACCCTGACTCACTCTTCTGTCCTTCCTaGGGACAGAAGCCACCGTGG | + |
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Preference number: 5 (lower is better) Translates to: EATTPERLSEKTESDPDSLFCPS*GQKPPW Trigger: CCACGGTGGCTTCTGTCCCAAGGAAGGACAGAAGAG...TGAGTCAGGGTCGCTCTCAGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS TCA 90 bp | GGTTCTCAGGATAGTCCCAGCCTGAGTCACAGGCCTGTGTCTCATTaGAGCGGTGGCTCAGGATGTCTTCCAGGCTGGCACTGTCAGGAG | + |
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Preference number: 5 (lower is better) Translates to: GSQDSPSLSHRPVSH*SGGSGCLPGWHCQE Trigger: CTCCTGACAGTGCCAGCCTGGAAGACATCCTGAGCCACCGCTTCAATGAGACACAGGCCTGTGACTCAGGCTGGGACTATCCTGAGAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CAA 90 bp | GGTGAGGCCACAACCCCAGAGAGACTGTCGGAGAAGACTGAGAGCGACCCTGACAATGCAGCCAGGAAATaGGGAATGCCCATCAGGATG | + |
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Preference number: 5 (lower is better) Translates to: GEATTPERLSEKTESDPDNAARK*GMPIRM Trigger: CATCCTGATGGGCATTCCCAATTTCCTGGCTGCATT...GTCAGGGTCGCTCTCAGTCTTCTCCGACAGTCTCTCTGGGGTTGTGGCCTCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CAA 90 bp | GGATGGGGTATCCCAGACAGGGAGACTGGTGAGGCCACAACCCCAGAGAGACTGCAAAGCCTCCATGTCTaGTCTTTGGGGTGCTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: GWGIPDRETGEATTPERLQSLHV*SLGCCF Trigger: AAAACAGCACCCCAAAGACAAGACATGGAGGCTTTG...CAGTCTCTCTGGGGTTGTGGCCTCACCAGTCTCCCTGTCTGGGATACCCCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS TCA 90 bp | GCAGCCAGGAAATTGGGAATGCCCATCAGGATGGTCAACCGCACCTaGAAGCGACCAAAGTCGCCCACTTCAGCCATGACCTGTGCAAAT | + |
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Preference number: 5 (lower is better) Translates to: AARKLGMPIRMVNRT*KRPKSPTSAMTCAN Trigger: ATTTGCACAGGTCATGGCTGAAGTGGGCGACTTTGGTCGCTTTCAGGTGCGGTTGACCATCCTGATGGGCATTCCCAATTTCCTGGCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS CCA 90 bp | CCAAAGACCAGGGCCCCAACAAGGAGACCAGCCATGAACACCGACTaGGAGGTCTTCTTCAGGTTCTTTCGATCACACACCAGGTCAAAC | + |
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Preference number: 5 (lower is better) Translates to: PKTRAPTRRPAMNTD*EVFFRFFRSHTRSN Trigger: GTTTGACCTGGTGTGTGATCGAAAGAACCTGAAGAAGACCTCCCAGTCGGTGTTCATGGCTGGTCTCCTTGTTGGGGCCCTGGTCTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CAA 90 bp | TGGGGTATCCCAGACAGGGAGACTGGTGAGGCCACAACCCCAGAGAGACTGTCGAGTAAAAATCCAGCATaGGCAGTAGCCAAGACAAAG | + |
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Preference number: 5 (lower is better) Translates to: WGIPDRETGEATTPERLSSKNPA*AVAKTK Trigger: CTTTGTCTTGGCTACTGCCAATGCTGGATTTTTACT...CGACAGTCTCTCTGGGGTTGTGGCCTCACCAGTCTCCCTGTCTGGGATACCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS GCA 90 bp | CTGGCAGAACCCAGAAATAGAAGAAGAGCAGTAAGACGGGTGCGGTaGCTGTTATCTGAAGGAGTCTCCAGTTTCGGACACCATAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: LAEPRNRRRAVRRVR*LLSEGVSSFGHHRP Trigger: TGGCCTATGGTGTCCGAAACTGGAGACTCCTTCAGATAACAGGCACCGCACCCGTCTTACTGCTCTTCTTCTATTTCTGGGTTCTGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS-3UTR CAA 90 bp | AGATGCCATGTGCGCTGTCCTCTGCTCTTGATAGGCTGGCCCTCAGCAGCCACAAAGGACCATGAAGACTaGGCCAAATATGAAGAATGC | + |
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Preference number: 5 (lower is better) Translates to: RCHVRCPLLLIGWPSAATKDHED*AKYEEC Trigger: GCATTCTTCATATTTGGCCAAGTCTTCATGGTCCTT...TGTGGCTGCTGAGGGCCAGCCTATCAAGAGCAGAGGACAGCGCACATGGCATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS GCA 90 bp | GTGAGCCTCATCAAGGACCATGAAGACTTGGCCAAATATGAAGAATaGAGCCAGGAAATTGGGAATGCCCATCAGGATGGTCAACCGCAC | + |
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Preference number: 5 (lower is better) Translates to: VSLIKDHEDLAKYEE*SQEIGNAHQDGQPH Trigger: GTGCGGTTGACCATCCTGATGGGCATTCCCAATTTCCTGGCTGCATTCTTCATATTTGGCCAAGTCTTCATGGTCCTTGATGAGGCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS TCA 72 bp | CTTCCAGGCTGGCACTGTCAGGAGGTGGCCGGAACATaGGGCAGGACTCGGGTCTGCCCGCTGTGTCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: LPGWHCQEVAGT*GRTRVCPLCRW Trigger: CCAACGACACAGCGGGCAGACCCGAGTCCTGCCTCATGTTCCGGCCACCTCCTGACAGTGCCAGCCTGGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS CCA 72 bp | GCTCAGGATGTCTTCCAGGCTGGCACTGTCAGGAGGTaGCCGGAACATGAGGCAGGACTCGGGTCTGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: AQDVFQAGTVRR*PEHEAGLGSAR Trigger: GCGGGCAGACCCGAGTCCTGCCTCATGTTCCGGCCACCTCCTGACAGTGCCAGCCTGGAAGACATCCTGAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS CAA 90 bp | CGGGGAAAGTGGCCGGCCGTTCACCAAGGCTGCCTTCTGGACCAGTaGTTTGGCCTCTTCTGTCCTTCCTTGGGACAGAAGCCACCGTGG | + |
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Preference number: 6 (lower is better) Translates to: RGKWPAVHQGCLLDQ*FGLFCPSLGQKPPW Trigger: CCACGGTGGCTTCTGTCCCAAGGAAGGACAGAAGAGGCCAAACAACTGGTCCAGAAGGCAGCCTTGGTGAACGGCCGGCCACTTTCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS GCA 72 bp | GAGCTCCGGGGAAAGTGGCCGGCCGTTCACCAAGGCTaGCTTCTGGACCAGTTGTTTGGCCTCTTCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: ELRGKWPAVHQG*LLDQLFGLFCP Trigger: AGGACAGAAGAGGCCAAACAACTGGTCCAGAAGGCAGCCTTGGTGAACGGCCGGCCACTTTCCCCGGAGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS GCA 72 bp | GCTGTGGCCATGCTTGTGATGCCTGACAGAAGCACCTaGATCAGGAGGGAGGGTCTGCGGCCAATCCAGTCA | + |
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Preference number: 6 (lower is better) Translates to: AVAMLVMPDRST*IRREGLRPIQS Trigger: TGACTGGATTGGCCGCAGACCCTCCCTCCTGATGCAGGTGCTTCTGTCAGGCATCACAAGCATGGCCACAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS CCA 72 bp | GGGGAAAGTGGCCGGCCGTTCACCAAGGCTGCCTTCTaGACCAGTTGTTTGGCCTCTTCTGTCCTTCCTTGG | + |
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Preference number: 6 (lower is better) Translates to: GESGRPFTKAAF*TSCLASSVLPW Trigger: CCAAGGAAGGACAGAAGAGGCCAAACAACTGGTCCAGAAGGCAGCCTTGGTGAACGGCCGGCCACTTTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS CAA 72 bp | AACATGAGGCAGGACTCGGGTCTGCCCGCTGTGTCGTaGGGGATGCTTATAGCCAGCTGCTCAGCGGCACTT | + |
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Preference number: 6 (lower is better) Translates to: NMRQDSGLPAVS*GMLIASCSAAL Trigger: AAGTGCCGCTGAGCAGCTGGCTATAAGCATCCCCAACGACACAGCGGGCAGACCCGAGTCCTGCCTCATGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS TCA 72 bp | GCTCAAAGCTGGACACGAAGGCTGTGGCCATGCTTGTaGTGCCTGACAGAAGCACCTGCATCAGGAGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: AQSWTRRLWPCL*CLTEAPASGGR Trigger: CCTCCCTCCTGATGCAGGTGCTTCTGTCAGGCATCACAAGCATGGCCACAGCCTTCGTGTCCAGCTTTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS GCA 72 bp | CCAGTCCTGCTAACACCATCTGCCCAAGGGCAACGTTaGTCTGGGCCAAGACCACGGCTTGTGTTCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: PVLLTPSAQGQR*SGPRPRLVFSK Trigger: CTTGGAGAACACAAGCCGTGGTCTTGGCCCAGAGCAACGTTGCCCTTGGGCAGATGGTGTTAGCAGGACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS CCA 72 bp | CCTGCTAACACCATCTGCCCAAGGGCAACGTTGCTCTaGGCCAAGACCACGGCTTGTGTTCTCCAAGATGGC | + |
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Preference number: 6 (lower is better) Translates to: PANTICPRATLL*AKTTACVLQDG Trigger: GCCATCTTGGAGAACACAAGCCGTGGTCTTGGCCCAGAGCAACGTTGCCCTTGGGCAGATGGTGTTAGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS CAA 72 bp | GCCAGTCCTGCTAACACCATCTGCCCAAGGGCAACGTaGCTCTGGGCCAAGACCACGGCTTGTGTTCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: ASPANTICPRAT*LWAKTTACVLQ Trigger: TTGGAGAACACAAGCCGTGGTCTTGGCCCAGAGCAACGTTGCCCTTGGGCAGATGGTGTTAGCAGGACTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS CAA 72 bp | TGGCCGGCCGTTCACCAAGGCTGCCTTCTGGACCAGTaGTTTGGCCTCTTCTGTCCTTCCTTGGGACAGAAG | + |
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Preference number: 6 (lower is better) Translates to: WPAVHQGCLLDQ*FGLFCPSLGQK Trigger: CTTCTGTCCCAAGGAAGGACAGAAGAGGCCAAACAACTGGTCCAGAAGGCAGCCTTGGTGAACGGCCGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS CCA 72 bp | GGGAGGCTGCCAAAGATGACCATGGGAATCGCCTGGTaGTACTGTTCCAGCAGCATCACAAGGGGTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: GRLPKMTMGIAW*YCSSSITRGVM Trigger: CATCACACCCCTTGTGATGCTGCTGGAACAGTACCACCAGGCGATTCCCATGGTCATCTTTGGCAGCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS CAA 72 bp | ATGCCAGCCAGAGTCAGAGTACACAGCTGGCTCCACTaGCGACCCAGCTTCTCCATCATGAGGACACTGAGG | + |
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Preference number: 6 (lower is better) Translates to: MPARVRVHSWLH*RPSFSIMRTLR Trigger: CCTCAGTGTCCTCATGATGGAGAAGCTGGGTCGCAAGTGGAGCCAGCTGTGTACTCTGACTCTGGCTGGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS CCA 72 bp | AGGGCCCCAACAAGGAGACCAGCCATGAACACCGACTaGGAGGTCTTCTTCAGGTTCTTTCGATCACACACC | + |
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Preference number: 6 (lower is better) Translates to: RAPTRRPAMNTD*EVFFRFFRSHT Trigger: GGTGTGTGATCGAAAGAACCTGAAGAAGACCTCCCAGTCGGTGTTCATGGCTGGTCTCCTTGTTGGGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS TCA 72 bp | AAATTGGGAATGCCCATCAGGATGGTCAACCGCACCTaGAAGCGACCAAAGTCGCCCACTTCAGCCATGACC | + |
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Preference number: 6 (lower is better) Translates to: KLGMPIRMVNRT*KRPKSPTSAMT Trigger: GGTCATGGCTGAAGTGGGCGACTTTGGTCGCTTTCAGGTGCGGTTGACCATCCTGATGGGCATTCCCAATTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS CAA 72 bp | CCTCACACTGGAAGTTCTTCCCAAAGCCTCCATGTCTaGTCTTTGGGGTGCTGTTTTGTGGGACCCTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PHTGSSSQSLHV*SLGCCFVGPCR Trigger: CCTGCAGGGTCCCACAAAACAGCACCCCAAAGACAAGACATGGAGGCTTTGGGAAGAACTTCCAGTGTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS CAA 72 bp | CTGTGTCACATAGATATCCAGGCCAAAGTCCCCCACTaGGAAGCTGAGGCTGTAGTACACCAGACTGTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LCHIDIQAKVPH*EAEAVVHQTVH Trigger: GTGGACAGTCTGGTGTACTACAGCCTCAGCTTCCAAGTGGGGGACTTTGGCCTGGATATCTATGTGACACAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS TCA 72 bp | CATAGATATCCAGGCCAAAGTCCCCCACTTGGAAGCTaGGGCTGTAGTACACCAGACTGTCCACAAACCAGA | + |
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Preference number: 6 (lower is better) Translates to: HRYPGQSPPLGS*GCSTPDCPQTR Trigger: TCTGGTTTGTGGACAGTCTGGTGTACTACAGCCTCAGCTTCCAAGTGGGGGACTTTGGCCTGGATATCTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS GCA 72 bp | CCCAGAAATAGAAGAAGAGCAGTAAGACGGGTGCGGTaGCTGTTATCTGAAGGAGTCTCCAGTTTCGGACAC | + |
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Preference number: 6 (lower is better) Translates to: PRNRRRAVRRVR*LLSEGVSSFGH Trigger: GTGTCCGAAACTGGAGACTCCTTCAGATAACAGGCACCGCACCCGTCTTACTGCTCTTCTTCTATTTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS CAA 90 bp | AAATATCAGCTGTGTCACATAGATATCCAGGCCAAAGTCCCCCACTaGGAAGCTGAGGCTGTAGTACACCAGACTGTCCACAAACCAGAC | + |
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Preference number: 6 (lower is better) Translates to: KYQLCHIDIQAKVPH*EAEAVVHQTVHKPD Trigger: GTCTGGTTTGTGGACAGTCTGGTGTACTACAGCCTCAGCTTCCAAGTGGGGGACTTTGGCCTGGATATCTATGTGACACAGCTGATATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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| CDS CAA 90 bp | GCTTGTGTTCTCCAAGATGGCCCCACCCACTCTGAAATCAGGACATaGGTACTTAGTAAAAATCCAGCATTGGCAGTAGCCAAGACAAAG | + |
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Preference number: 6 (lower is better) Translates to: ACVLQDGPTHSEIRT*VLSKNPALAVAKTK Trigger: CTTTGTCTTGGCTACTGCCAATGCTGGATTTTTACTAAGTACCAATGTCCTGATTTCAGAGTGGGTGGGGCCATCTTGGAGAACACAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000084797.6 |
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