Pregenerated sensors for SLC22A12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000061742Ensembl transcript IDs: ENSMUST00000113451.9, ENSMUST00000126142.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | AAAATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCTCGCCGTCGCCAGCCCTaGCCTTTACTCCTCCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: KIIYLCVSPGAGMCPCGARRRQP*PLLLLL Trigger: GAGGAGGAGGAGTAAAGGGCAGGGCTGGCGACGGCG...AGCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| 3UTR-3UTR CCA 90 bp | AAAATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCTCTCCTCCTCTTATTGTaGCTGTGTTCCTTCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: KIIYLCVSPGAGMCPCGALLLLL*LCSFSR Trigger: CCTGGAGAAGGAACACAGCCACAATAAGAGGAGGAG...AGCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| 3UTR-3UTR CAA 90 bp | AAAAATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCTTCCTCCTCCTCTTATaGTGGCTGTGTTCCTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: KNYLFVCITGGGYVSMRSFLLLL*WLCSFS Trigger: GGAGAAGGAACACAGCCACAATAAGAGGAGGAGGAA...GCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| 3UTR TCA 72 bp | GGTATGTGTCCATGCGGAGCTCAGAGGACAACTTTGTaGAGTCTGTTGTCACATGAGTTTCAGAAATTTAGG | + |
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Preference number: 3 (lower is better) Translates to: GMCPCGAQRTTL*SLLSHEFQKFR Trigger: CCTAAATTTCTGAAACTCATGTGACAACAGACTTCACAAAGTTGTCCTCTGAGCTCCGCATGGACACATACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR TCA 90 bp | AGGCAGGTGTCTTTACCCGCCGTCGCCAGCCCTGCCCTTTACTCCTCCTCCTCCAGCACAGCATGGAGATaGTGGTTCGGTGGCGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: RQVSLPAVASPALYSSSSSTAWR*WFGGAA Trigger: GGCTGCGCCACCGAACCATCATCTCCATGCTGTGCT...GGAGGAGGAGGAGTAAAGGGCAGGGCTGGCGACGGCGGGTAAAGACACCTGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CCA 90 bp | AGGCAGGTGTCTTTACCCGCCGTCGCCAGCCCTGCCCTTTACTCCTCCTCCTCCCACTGGTGGGGTTGCTaGTCAGGACCAGGTGGGATG | + |
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Preference number: 4 (lower is better) Translates to: RQVSLPAVASPALYSSSSHWWGC*SGPGGM Trigger: CATCCCACCTGGTCCTGACCAGCAACCCCACCAGTG...GGAGGAGGAGGAGTAAAGGGCAGGGCTGGCGACGGCGGGTAAAGACACCTGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CCA 90 bp | AGGCAGGTGTCTTTACCCGCCGTCGCCAGCCCTGCCCTTTACTCCTCCTCCTCCAAGCGGAGGCACTGGTaGGGTTGCTGGTCAGGACCA | + |
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Preference number: 4 (lower is better) Translates to: RQVSLPAVASPALYSSSSKRRHW*GCWSGP Trigger: TGGTCCTGACCAGCAACCCCACCAGTGCCTCCGCTT...GGAGGAGGAGGAGTAAAGGGCAGGGCTGGCGACGGCGGGTAAAGACACCTGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR GCA 90 bp | AGGCAGGTGTCTTTACCCGCCGTCGCCAGCCCTGCCCTTTACTCCTCCTCCTCCGTGTGTGGAGTAGAGTaGCCAGACTGGCACCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: RQVSLPAVASPALYSSSSVCGVE*PDWHQL Trigger: AAGCTGGTGCCAGTCTGGGCACTCTACTCCACACAC...GGAGGAGGAGGAGTAAAGGGCAGGGCTGGCGACGGCGGGTAAAGACACCTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR GCA 90 bp | AGGCAGGTGTCTTTACCCGCCGTCGCCAGCCCTGCCCTTTACTCCTCCTCCTCCCTGGCAGAGGCCCACTaGAGTCATCCTGATCACAGT | + |
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Preference number: 4 (lower is better) Translates to: RQVSLPAVASPALYSSSSLAEAH*SHPDHS Trigger: ACTGTGATCAGGATGACTGCAGTGGGCCTCTGCCAG...GGAGGAGGAGGAGTAAAGGGCAGGGCTGGCGACGGCGGGTAAAGACACCTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR TCA 90 bp | TTGTCACATGAGTTTCAGAAATTTAGGCCCGGAGGCAGGTGTCTTTACCCGCCGGCCGGCCCAAGCGGCTaGTCAGCAGCAGGCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: LSHEFQKFRPGGRCLYPPAGPSG*SAAGCL Trigger: CAGGCAGCCTGCTGCTGATCAGCCGCTTGGGCCGGC...CGGCGGGTAAAGACACCTGCCTCCGGGCCTAAATTTCTGAAACTCATGTGACAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CCA 90 bp | GGCGGGTATGTGTCCATGCGGAGCTCAGAGGACAACTTTGTGAAGTCTGTTGTCGCCAGGAAGATGGACTaGGCCATGGGTCTCAGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GGYVSMRSSEDNFVKSVVARKMD*AMGLRA Trigger: GGCCCTGAGACCCATGGCCCAGTCCATCTTCCTGGC...GACAACAGACTTCACAAAGTTGTCCTCTGAGCTCCGCATGGACACATACCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CCA 90 bp | CCTCCTCCTCCTCTTCTTCCTCCTCCTCTTATTGTGGCTGTGTTCCTTCTCCAGCTGGTCAGGACCAGGTaGGATGGAGACGGCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: PPPPLLPPPLIVAVFLLQLVRTR*DGDGQK Trigger: CTTCTGGCCGTCTCCATCCCACCTGGTCCTGACCAG...CTGGAGAAGGAACACAGCCACAATAAGAGGAGGAGGAAGAAGAGGAGGAGGAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CCA 90 bp | CCTCCTCCTCCTCTTCTTCCTCCTCCTCTTATTGTGGCTGTGTTCCTTCTCCAGCAGCGTCACTCCAGTTaGTGGCCGTGGCGTTGGACT | + |
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Preference number: 4 (lower is better) Translates to: PPPPLLPPPLIVAVFLLQQRHSS*WPWRWT Trigger: AGTCCAACGCCACGGCCACCAACTGGAGTGACGCTG...CTGGAGAAGGAACACAGCCACAATAAGAGGAGGAGGAAGAAGAGGAGGAGGAGG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR TCA 90 bp | GGGCGGGTATGTGTCCATGCGGAGCTCAGAGGACAACTTTGTGAAGTCTGTTGTCCAGGCCGTAGAAGGTaGAGCCAAAGGCAAACCAGC | + |
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Preference number: 4 (lower is better) Translates to: GRVCVHAELRGQLCEVCCPGRRR*SQRQTS Trigger: GCTGGTTTGCCTTTGGCTTCACCTTCTACGGCCTGG...ACAACAGACTTCACAAAGTTGTCCTCTGAGCTCCGCATGGACACATACCCGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR GCA 90 bp | GGCGGGTATGTGTCCATGCGGAGCTCAGAGGACAACTTTGTGAAGTCTGTTGTCACCCTCTGTAGTTCCTaGAGGCCCTGGTCCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: GGYVSMRSSEDNFVKSVVTLCSS*RPWSSL Trigger: CAAGCTGGACCAGGGCCTGCAGGAACTACAGAGGGT...GACAACAGACTTCACAAAGTTGTCCTCTGAGCTCCGCATGGACACATACCCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CCA 90 bp | GGCGGGTATGTGTCCATGCGGAGCTCAGAGGACAACTTTGTGAAGTCTGTTGTCAGGACCCCCATCCCATaGGGCACCAGTATGTTGGAC | + |
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Preference number: 4 (lower is better) Translates to: GGYVSMRSSEDNFVKSVVRTPIP*GTSMLD Trigger: GTCCAACATACTGGTGCCCCATGGGATGGGGGTCCT...GACAACAGACTTCACAAAGTTGTCCTCTGAGCTCCGCATGGACACATACCCGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CCA 90 bp | AAAAATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCCCTCGGGCTGCCACCTaGCAGAGGCCCACTGCAGTC | + |
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Preference number: 4 (lower is better) Translates to: KNYLFVCITGGGYVSMRSPRAAT*QRPTAV Trigger: GACTGCAGTGGGCCTCTGCCAGGTGGCAGCCCGAGG...GCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CCA 90 bp | AAATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCTCCCAAAGGCCCTAGCATaGCTCCCCCTCGGGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: KLFICVYHRGRVCVHAELPKALA*LPLGLP Trigger: TGGCAGCCCGAGGGGGAGCCATGCTAGGGCCTTTGG...GAGCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CCA 90 bp | AGGCAGGTGTCTTTACCCGCCGTCGCCAGCCCTGCCCTTTACTCCTCCTCCTCCTTCACTGACTGTTTCTaGATGTCTTGGATGGTGTCA | + |
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Preference number: 4 (lower is better) Translates to: RQVSLPAVASPALYSSSSFTDCF*MSWMVS Trigger: TGACACCATCCAAGACATCCAGAAACAGTCAGTGAA...GGAGGAGGAGGAGTAAAGGGCAGGGCTGGCGACGGCGGGTAAAGACACCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR TCA 90 bp | GGCGGGTATGTGTCCATGCGGAGCTCAGAGGACAACTTTGTGAAGTCTGTTGTCGCATGTTCTGGGTGGTaGCCCACAAAATGGGGGTCA | + |
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Preference number: 4 (lower is better) Translates to: GGYVSMRSSEDNFVKSVVACSGW*PTKWGS Trigger: TGACCCCCATTTTGTGGGTCACCACCCAGAACATGC...GACAACAGACTTCACAAAGTTGTCCTCTGAGCTCCGCATGGACACATACCCGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR TCA 90 bp | CCTCCTCCTCCTCTTCTTCCTCCTCCTCTTATTGTGGCTGTGTTCCTTCTCCAGGTGGGGAACTGCGGCTaGGAAGTTCTCCAGCATGTT | + |
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Preference number: 4 (lower is better) Translates to: PPPPLLPPPLIVAVFLLQVGNCG*EVLQHV Trigger: AACATGCTGGAGAACTTCTCAGCCGCAGTTCCCCAC...CTGGAGAAGGAACACAGCCACAATAAGAGGAGGAGGAAGAAGAGGAGGAGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR TCA 90 bp | GGGCGGGTATGTGTCCATGCGGAGCTCAGAGGACAACTTTGTGAAGTCTGTTGTTCTGTAAGCTGCCATTaGGGTTGTCGGAAGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: GRVCVHAELRGQLCEVCCSVSCH*GCRKRR Trigger: CCTCCGCTTCCGACAACCTCAATGGCAGCTTACAGA...ACAACAGACTTCACAAAGTTGTCCTCTGAGCTCCGCATGGACACATACCCGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR GCA 90 bp | AATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCTCAAGGCACTGGTGGGGTTaGTGGTCAGGACCAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: NYLFVCITGGGYVSMRSSRHWWG*WSGPGG Trigger: CCCACCTGGTCCTGACCAGCAACCCCACCAGTGCCT...TGAGCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR GCA 90 bp | GGGCGGGTATGTGTCCATGCGGAGCTCAGAGGACAACTTTGTGAAGTCTGTTGTGTTCATCATGACACCTaGCACTGCAGAGGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: GRVCVHAELRGQLCEVCCVHHDT*HCRGQQ Trigger: CTGCTGGCCTCTGCAGTGGCAGGTGTCATGATGAAC...ACAACAGACTTCACAAAGTTGTCCTCTGAGCTCCGCATGGACACATACCCGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR GCA 90 bp | GGCGGGTATGTGTCCATGCGGAGCTCAGAGGACAACTTTGTGAAGTCTGTTGTCCAACGTGTCTCCCTCTaGCTTCCTCCTGTTGACAGC | + |
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Preference number: 4 (lower is better) Translates to: GGYVSMRSSEDNFVKSVVQRVSL*LPPVDS Trigger: GCTGTCAACAGGAGGAAGGCAGAGGGAGACACGTTG...GACAACAGACTTCACAAAGTTGTCCTCTGAGCTCCGCATGGACACATACCCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR TCA 90 bp | AGAGGACAACTTTGTGAAGTCTGTTGTCACATGAGTTTCAGAAATTTAGGCCCGGGGGGAAGGTGGGCATaGAGGCAGCTGCTGTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: RGQLCEVCCHMSFRNLGPGGRWA*RQLLCR Trigger: CCGGCACAGCAGCTGCCTTCATGCCCACCTTCCCCC...CGGGCCTAAATTTCTGAAACTCATGTGACAACAGACTTCACAAAGTTGTCCTCT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR TCA 90 bp | TTGTCACATGAGTTTCAGAAATTTAGGCCCGGAGGCAGGTGTCTTTACCCGCCGCCACTGCAGTCATCCTaGTCACAGTGGGGAAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: LSHEFQKFRPGGRCLYPPPLQSS*SQWGRA Trigger: AGCTCTTCCCCACTGTGATCAGGATGACTGCAGTGG...CGGCGGGTAAAGACACCTGCCTCCGGGCCTAAATTTCTGAAACTCATGTGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR GCA 90 bp | AAATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCTCGGCATGGCCACACACTaGGGCTCCTACCAGGATTCC | + |
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Preference number: 4 (lower is better) Translates to: KLFICVYHRGRVCVHAELGMATH*GSYQDS Trigger: GGAATCCTGGTAGGAGCCGCAGTGTGTGGCCATGCC...GAGCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CCA 90 bp | AATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCTCAACCAGAGCCACCGTCTaGAAGAGCTGGAACCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: NYLFVCITGGGYVSMRSSTRATV*KSWNLP Trigger: GGGCAGGTTCCAGCTCTTCCAGACGGTGGCTCTGGT...TGAGCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR TCA 90 bp | TGTGAAGTCTGTTGTCACATGAGTTTCAGAAATTTAGGCCCGGAGGCAGGTGTCAGGGCTACCCTGGGCTaGTGTCCACTCCATCAAGAG | + |
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Preference number: 4 (lower is better) Translates to: CEVCCHMSFRNLGPEAGVRATLG*CPLHQE Trigger: CTCTTGATGGAGTGGACATCAGCCCAGGGTAGCCCT...GACACCTGCCTCCGGGCCTAAATTTCTGAAACTCATGTGACAACAGACTTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR GCA 90 bp | AAAAATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCTTGCTTCCTAGGGCTTaGAGGTCAAGGGCCAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: KNYLFVCITGGGYVSMRSLLPRA*RSRARP Trigger: CGGCCTGGCCCTTGACCTGCAAGCCCTAGGAAGCAA...GCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CCA 90 bp | AAAAATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCAGATGGACTGGGCCATaGGTCTCAGGGCCTGGGAGT | + |
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Preference number: 4 (lower is better) Translates to: KNYLFVCITGGGYVSMRSRWTGP*VSGPGS Trigger: ACTCCCAGGCCCTGAGACCCATGGCCCAGTCCATCT...GCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR TCA 90 bp | TGTGAAGTCTGTTGTCACATGAGTTTCAGAAATTTAGGCCCGGAGGCAGGTGTCTGGCTGTGTTCATCATaGCACCTGCCACTGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: CEVCCHMSFRNLGPEAGVWLCSS*HLPLQR Trigger: CCTCTGCAGTGGCAGGTGTCATGATGAACACAGCCA...GACACCTGCCTCCGGGCCTAAATTTCTGAAACTCATGTGACAACAGACTTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR GCA 90 bp | TTGTCACATGAGTTTCAGAAATTTAGGCCCGGAGGCAGGTGTCTTTACCCGCCGGGAGCAGGAAGATATTaGTTCCTAGGGCTTGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: LSHEFQKFRPGGRCLYPPGAGRY*FLGLAG Trigger: ACCTGCAAGCCCTAGGAAGCAATATCTTCCTGCTCC...CGGCGGGTAAAGACACCTGCCTCCGGGCCTAAATTTCTGAAACTCATGTGACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR GCA 90 bp | AATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCTCAGTATGTTGGACAGGATaGAGAGTCCGGGGAGCACCA | + |
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Preference number: 4 (lower is better) Translates to: NYLFVCITGGGYVSMRSSVCWTG*RVRGAP Trigger: TGGTGCTCCCCGGACTCTGCATCCTGTCCAACATAC...TGAGCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CCA 90 bp | TGTGAAGTCTGTTGTCACATGAGTTTCAGAAATTTAGGCCCGGAGGCAGGTGTCTTCCAGCCAGGAAGATaGACTGGGCCATGGGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: CEVCCHMSFRNLGPEAGVFQPGR*TGPWVS Trigger: TGAGACCCATGGCCCAGTCCATCTTCCTGGCTGGAA...GACACCTGCCTCCGGGCCTAAATTTCTGAAACTCATGTGACAACAGACTTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CCA 90 bp | GGGCGGGTATGTGTCCATGCGGAGCTCAGAGGACAACTTTGTGAAGTCTGTTGTCAGGATGGAGCCATCTaGTGTGTCATGTGTTACCTT | + |
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Preference number: 4 (lower is better) Translates to: GRVCVHAELRGQLCEVCCQDGAI*CVMCYL Trigger: AAGGTAACACATGACACACCAGATGGCTCCATCCTG...ACAACAGACTTCACAAAGTTGTCCTCTGAGCTCCGCATGGACACATACCCGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR TCA 90 bp | AAAAATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCCTGCCTTCCTCCTGTTaGCAGCAGCTACCCTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: KNYLFVCITGGGYVSMRSLPSSC*QQLPSV Trigger: TACAGAGGGTAGCTGCTGTCAACAGGAGGAAGGCAG...GCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CCA 90 bp | AGAGGACAACTTTGTGAAGTCTGTTGTCACATGAGTTTCAGAAATTTAGGCCCGGGGGCACCAGTATGTTaGACAGGATGCAGAGTCCGG | + |
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Preference number: 4 (lower is better) Translates to: RGQLCEVCCHMSFRNLGPGAPVC*TGCRVR Trigger: CCGGACTCTGCATCCTGTCCAACATACTGGTGCCCC...CGGGCCTAAATTTCTGAAACTCATGTGACAACAGACTTCACAAAGTTGTCCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CCA 90 bp | AAAATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCTGCAGTGGTAAGTTCTTaGTCTCAGGCAGCAGCAGTG | + |
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Preference number: 4 (lower is better) Translates to: KIIYLCVSPGAGMCPCGAAVVSS*SQAAAV Trigger: CACTGCTGCTGCCTGAGACCAAGAACTTACCACTGC...AGCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR GCA 90 bp | AGAGGACAACTTTGTGAAGTCTGTTGTCACATGAGTTTCAGAAATTTAGGCCCGAGGTCAGCACCCTTCTaGGCCCAAACCTATCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: RGQLCEVCCHMSFRNLGPRSAPF*AQTYLR Trigger: CCTCAGATAGGTTTGGGCGCAGAAGGGTGCTGACCT...CGGGCCTAAATTTCTGAAACTCATGTGACAACAGACTTCACAAAGTTGTCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS CCA 90 bp | ATGTTGGACAGGATGCAGAGTCCGGGGAGCACCAGGAAGCTGACCTaGCAGAGGCGCCGGCCCAAGCGGCTGATCAGCAGCAGGCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: MLDRMQSPGSTRKLT*QRRRPKRLISSRLP Trigger: AGGCAGCCTGCTGCTGATCAGCCGCTTGGGCCGGCGCCTCTGCCAGGTCAGCTTCCTGGTGCTCCCCGGACTCTGCATCCTGTCCAACAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS GCA 90 bp | CCCTCTGCCTTCCTCCTGTTGACAGCAGCTACCCTCTGTAGTTCCTaGAGGCCCTGGTCCAGCTTGCCTACCGTGATGAGCCAGCGTGCC | + |
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Preference number: 5 (lower is better) Translates to: PSAFLLLTAATLCSS*RPWSSLPTVMSQRA Trigger: GGCACGCTGGCTCATCACGGTAGGCAAGCTGGACCAGGGCCTGCAGGAACTACAGAGGGTAGCTGCTGTCAACAGGAGGAAGGCAGAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
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| CDS CCA 90 bp | ACGGCCAGAAGAACATCGGGTCCAAGGTCCCCAGGGATACTCGCCTaGGAGGTGCTATTGTCCAGGAGAGGCACCCAACAGCGGTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: TARRTSGPRSPGILA*EVLLSRRGTQQRWW Trigger: CCACCACCGCTGTTGGGTGCCTCTCCTGGACAATAGCACCTCCCAGGCGAGTATCCCTGGGGACCTTGGACCCGATGTTCTTCTGGCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
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| CDS GCA 90 bp | GAAGAACATCGGGTCCAAGGTCCCCAGGGATACTCGCCTGGGAGGTaGTATTGTCCAGGAGAGGCACCCAACAGCGGTGGTGGGGAACTG | + |
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Preference number: 5 (lower is better) Translates to: EEHRVQGPQGYSPGR*YCPGEAPNSGGGEL Trigger: CAGTTCCCCACCACCGCTGTTGGGTGCCTCTCCTGGACAATAGCACCTCCCAGGCGAGTATCCCTGGGGACCTTGGACCCGATGTTCTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
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| CDS TCA 90 bp | AGGCCAGCAGGAAACGAAACAGGCAGTAGAGGGGGAAGGTGGGCATaGAGGCAGCTGCTGTGCCGGACACGGACACCAGAAGATAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RPAGNETGSRGGRWA*RQLLCRTRTPEDSS Trigger: GGAGCTATCTTCTGGTGTCCGTGTCCGGCACAGCAGCTGCCTTCATGCCCACCTTCCCCCTCTACTGCCTGTTTCGTTTCCTGCTGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
||
| CDS TCA 90 bp | GCAGCACCTCCATGGTCAACGTGTCTCCCTCTGCCTTCCTCCTGTTaGCAGCAGCTACCCTCTGTAGTTCCTGCAGGCCCTGGTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AAPPWSTCLPLPSSC*QQLPSVVPAGPGPA Trigger: AGCTGGACCAGGGCCTGCAGGAACTACAGAGGGTAGCTGCTGTCAACAGGAGGAAGGCAGAGGGAGACACGTTGACCATGGAGGTGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
||
| CDS GCA 90 bp | TGCCGGACACGGACACCAGAAGATAGCTCCAGGTCAGCACCCTTCTaGGCCCAAACCTATCTGAGGCATGGCCACACACTGCGGCTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: CRTRTPEDSSRSAPF*AQTYLRHGHTLRLL Trigger: TAGGAGCCGCAGTGTGTGGCCATGCCTCAGATAGGTTTGGGCGCAGAAGGGTGCTGACCTGGAGCTATCTTCTGGTGTCCGTGTCCGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
||
| CDS GCA 90 bp | AGAGGAAGAAGGGGGCAGAGACAGCCAGCTGTAGCATCCTCCAGCTaGGCACACCATAGGCCACAGAACCTGTCAGGACCTGCCCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: RGRRGQRQPAVASSS*AHHRPQNLSGPAQS Trigger: GCTTTGGGCAGGTCCTGACAGGTTCTGTGGCCTATGGTGTGCGCAGCTGGAGGATGCTACAGCTGGCTGTCTCTGCCCCCTTCTTCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS TCA 90 bp | CAGAAGATAGCTCCAGGTCAGCACCCTTCTGCGCCCAAACCTATCTaGGGCATGGCCACACACTGCGGCTCCTACCAGGATTCCAGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QKIAPGQHPSAPKPI*GMATHCGSYQDSSQ Trigger: CTGGCTGGAATCCTGGTAGGAGCCGCAGTGTGTGGCCATGCCTCAGATAGGTTTGGGCGCAGAAGGGTGCTGACCTGGAGCTATCTTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
||
| CDS TCA 90 bp | TGCGCACACCATAGGCCACAGAACCTGTCAGGACCTGCCCAAAGCTaGAGCCCAAGGCGTTCAAGGTCATCACCAAAGGGCTACCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: CAHHRPQNLSGPAQS*SPRRSRSSPKGYPG Trigger: CCCAGGGTAGCCCTTTGGTGATGACCTTGAACGCCTTGGGCTTCAGCTTTGGGCAGGTCCTGACAGGTTCTGTGGCCTATGGTGTGCGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
||
| CDS TCA 90 bp | CAGACTGGCACCAGCTTTGTCCCTGCTTGGTTCCTCCTCCATAGCTaGCCGCAGCACCTCCATGGTCAACGTGTCTCCCTCTGCCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: QTGTSFVPAWFLLHS*PQHLHGQRVSLCLP Trigger: AGGAAGGCAGAGGGAGACACGTTGACCATGGAGGTGCTGCGGTCAGCTATGGAGGAGGAACCAAGCAGGGACAAAGCTGGTGCCAGTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
||
| CDS CCA 90 bp | TTCCTCCTGTTGACAGCAGCTACCCTCTGTAGTTCCTGCAGGCCCTaGTCCAGCTTGCCTACCGTGATGAGCCAGCGTGCCGATTCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FLLLTAATLCSSCRP*SSLPTVMSQRADSG Trigger: ACCAGAATCGGCACGCTGGCTCATCACGGTAGGCAAGCTGGACCAGGGCCTGCAGGAACTACAGAGGGTAGCTGCTGTCAACAGGAGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
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| CDS CCA 90 bp | GTGATGAGCCAGCGTGCCGATTCTGGTAGCCACCTATCTGAGGCATaGCCACACACTGCGGCTCCTACCAGGATTCCAGCCAGGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: VMSQRADSGSHLSEA*PHTAAPTRIPARKM Trigger: CATCTTCCTGGCTGGAATCCTGGTAGGAGCCGCAGTGTGTGGCCATGCCTCAGATAGGTGGCTACCAGAATCGGCACGCTGGCTCATCAC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126142.2 |
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| CDS-3UTR CAA 90 bp | GGGCGGGTATGTGTCCATGCGGAGCTCAGAGGACAACTTTGTGAAGTCTGTTGTGCAGCGTCACTCCAGTaGGTGGCCGTGGCGTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRVCVHAELRGQLCEVCCAASLQ*VAVALD Trigger: GTCCAACGCCACGGCCACCAACTGGAGTGACGCTGC...ACAACAGACTTCACAAAGTTGTCCTCTGAGCTCCGCATGGACACATACCCGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
||
| CDS TCA 90 bp | ATTGTCCAGGAGAGGCACCCAACAGCGGTGGTGGGGAACTGCGGCTaGGAAGTTCTCCAGCATGTTCTGGGTGGTGACCCACAAAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: IVQERHPTAVVGNCG*EVLQHVLGGDPQNG Trigger: CCCATTTTGTGGGTCACCACCCAGAACATGCTGGAGAACTTCTCAGCCGCAGTTCCCCACCACCGCTGTTGGGTGCCTCTCCTGGACAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
||
| CDS CCA 90 bp | AGGCTGCCTGTCTTCACCGGGAAGTCCACAATCCCGATGAGTGCCTaGAGCAGGAAGATATTGCTTCCTAGGGCTTGCAGGTCAAGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RLPVFTGKSTIPMSA*SRKILLPRACRSRA Trigger: GGCCCTTGACCTGCAAGCCCTAGGAAGCAATATCTTCCTGCTCCAGGCACTCATCGGGATTGTGGACTTCCCGGTGAAGACAGGCAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
||
| CDS TCA 90 bp | TCAGCAGCAGGCTGCCTGTCTTCACCGGGAAGTCCACAATCCCGATaGGTGCCTGGAGCAGGAAGATATTGCTTCCTAGGGCTTGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SAAGCLSSPGSPQSR*VPGAGRYCFLGLAG Trigger: ACCTGCAAGCCCTAGGAAGCAATATCTTCCTGCTCCAGGCACTCATCGGGATTGTGGACTTCCCGGTGAAGACAGGCAGCCTGCTGCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
||
| CDS TCA 90 bp | CCTGGGCTGATGTCCACTCCATCAAGAGACTGGCTGTGTTCATCATaGCACCTGCCACTGCAGAGGCCAGCAGGAAACGAAACAGGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: PGLMSTPSRDWLCSS*HLPLQRPAGNETGS Trigger: ACTGCCTGTTTCGTTTCCTGCTGGCCTCTGCAGTGGCAGGTGTCATGATGAACACAGCCAGTCTCTTGATGGAGTGGACATCAGCCCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS TCA 90 bp | GAAGCCCAAGGCGTTCAAGGTCATCACCAAAGGGCTACCCTGGGCTaGTGTCCACTCCATCAAGAGACTGGCTGTGTTCATCATGACACC | + |
|
Preference number: 5 (lower is better) Translates to: EAQGVQGHHQRATLG*CPLHQETGCVHHDT Trigger: GGTGTCATGATGAACACAGCCAGTCTCTTGATGGAGTGGACATCAGCCCAGGGTAGCCCTTTGGTGATGACCTTGAACGCCTTGGGCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CAA 90 bp | AAAATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCTGAGGCACTGGTGGGGTaGCTGGTCAGGACCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KIIYLCVSPGAGMCPCGAEALVG*LVRTRW Trigger: CCACCTGGTCCTGACCAGCAACCCCACCAGTGCCTC...AGCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS CCA 90 bp | AAGCTGAAGCCCAAGGCGTTCAAGGTCATCACCAAAGGGCTACCCTaGGCTGATGTCCACTCCATCAAGAGACTGGCTGTGTTCATCATG | + |
|
Preference number: 5 (lower is better) Translates to: KLKPKAFKVITKGLP*ADVHSIKRLAVFIM Trigger: CATGATGAACACAGCCAGTCTCTTGATGGAGTGGACATCAGCCCAGGGTAGCCCTTTGGTGATGACCTTGAACGCCTTGGGCTTCAGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS CCA 90 bp | ACTGTTTCTGGATGTCTTGGATGGTGTCAGGCAGTGGTAAGTTCTTaGTCTCAGGCAGCAGCAGTGCAGCTAGGCCACTTAACACTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVSGCLGWCQAVVSS*SQAAAVQLGHLTLA Trigger: TGCCAGTGTTAAGTGGCCTAGCTGCACTGCTGCTGCCTGAGACCAAGAACTTACCACTGCCTGACACCATCCAAGACATCCAGAAACAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CAA 90 bp | AAAAATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCGCCTGGGAGGTGCTATaGTCCAGGAGAGGCACCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KNYLFVCITGGGYVSMRSAWEVL*SRRGTQ Trigger: TTGGGTGCCTCTCCTGGACAATAGCACCTCCCAGGC...GCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATTTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
||
| CDS-3UTR CAA 90 bp | TGTGAAGTCTGTTGTCACATGAGTTTCAGAAATTTAGGCCCGGAGGCAGGTGTCCTCTGTAAGCTGCCATaGAGGTTGTCGGAAGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CEVCCHMSFRNLGPEAGVLCKLP*RLSEAE Trigger: CTCCGCTTCCGACAACCTCAATGGCAGCTTACAGAG...GACACCTGCCTCCGGGCCTAAATTTCTGAAACTCATGTGACAACAGACTTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CAA 90 bp | AAAAATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCTGGGGCACCAGTATGTaGGACAGGATGCAGAGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: KNYLFVCITGGGYVSMRSWGTSM*DRMQSP Trigger: CGGACTCTGCATCCTGTCCAACATACTGGTGCCCCA...GCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
||
| CDS-3UTR CAA 90 bp | AAATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCTCTGGAGCAGGAAGATATaGCTTCCTAGGGCTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KLFICVYHRGRVCVHAELWSRKI*LPRACR Trigger: CCTGCAAGCCCTAGGAAGCAATATCTTCCTGCTCCA...GAGCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
||
| CDS-3UTR CAA 90 bp | AATTATTTATTTGTGTGTATCACCGGGGGCGGGTATGTGTCCATGCGGAGCTCACTGTTTCTGGATGTCTaGGATGGTGTCAGGCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: NYLFVCITGGGYVSMRSSLFLDV*DGVRQW Trigger: CCACTGCCTGACACCATCCAAGACATCCAGAAACAG...TGAGCTCCGCATGGACACATACCCGCCCCCGGTGATACACACAAATAAATAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
||
| CDS-3UTR CAA 90 bp | AGAGGACAACTTTGTGAAGTCTGTTGTCACATGAGTTTCAGAAATTTAGGCCCGTCTGCCTTCCTCCTGTaGACAGCAGCTACCCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RGQLCEVCCHMSFRNLGPSAFLL*TAATLC Trigger: ACAGAGGGTAGCTGCTGTCAACAGGAGGAAGGCAGA...CGGGCCTAAATTTCTGAAACTCATGTGACAACAGACTTCACAAAGTTGTCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS-3UTR CAA 90 bp | AGAGGACAACTTTGTGAAGTCTGTTGTCACATGAGTTTCAGAAATTTAGGCCCGGGCAGTGGTAAGTTCTaGGTCTCAGGCAGCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RGQLCEVCCHMSFRNLGPGSGKF*VSGSSS Trigger: ACTGCTGCTGCCTGAGACCAAGAACTTACCACTGCC...CGGGCCTAAATTTCTGAAACTCATGTGACAACAGACTTCACAAAGTTGTCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS CCA 72 bp | AGGATGCAGAGTCCGGGGAGCACCAGGAAGCTGACCTaGCAGAGGCGCCGGCCCAAGCGGCTGATCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RMQSPGSTRKLT*QRRRPKRLISS Trigger: GCTGCTGATCAGCCGCTTGGGCCGGCGCCTCTGCCAGGTCAGCTTCCTGGTGCTCCCCGGACTCTGCATCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS CCA 72 bp | AAAGGCCCTAGCATGGCTCCCCCTCGGGCTGCCACCTaGCAGAGGCCCACTGCAGTCATCCTGATCACAGTG | + |
|
Preference number: 6 (lower is better) Translates to: KGPSMAPPRAAT*QRPTAVILITV Trigger: CACTGTGATCAGGATGACTGCAGTGGGCCTCTGCCAGGTGGCAGCCCGAGGGGGAGCCATGCTAGGGCCTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS CAA 72 bp | CCAAGGTCCCCAGGGATACTCGCCTGGGAGGTGCTATaGTCCAGGAGAGGCACCCAACAGCGGTGGTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PRSPGILAWEVL*SRRGTQQRWWG Trigger: TCCCCACCACCGCTGTTGGGTGCCTCTCCTGGACAATAGCACCTCCCAGGCGAGTATCCCTGGGGACCTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
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| CDS CAA 90 bp | ACATCGGGTCCAAGGTCCCCAGGGATACTCGCCTGGGAGGTGCTATaGTCCAGGAGAGGCACCCAACAGCGGTGGTGGGGAACTGCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: TSGPRSPGILAWEVL*SRRGTQQRWWGTAA Trigger: AGCCGCAGTTCCCCACCACCGCTGTTGGGTGCCTCTCCTGGACAATAGCACCTCCCAGGCGAGTATCCCTGGGGACCTTGGACCCGATGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
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| CDS CCA 72 bp | GGCGCAGCCCAGGTGTGTGGAGTAGAGTGCCCAGACTaGCACCAGCTTTGTCCCTGCTTGGTTCCTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GAAQVCGVECPD*HQLCPCLVPPP Trigger: TGGAGGAGGAACCAAGCAGGGACAAAGCTGGTGCCAGTCTGGGCACTCTACTCCACACACCTGGGCTGCGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
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| CDS CAA 90 bp | CGCAGCACCTCCATGGTCAACGTGTCTCCCTCTGCCTTCCTCCTGTaGACAGCAGCTACCCTCTGTAGTTCCTGCAGGCCCTGGTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSTSMVNVSPSAFLL*TAATLCSSCRPWSS Trigger: GCTGGACCAGGGCCTGCAGGAACTACAGAGGGTAGCTGCTGTCAACAGGAGGAAGGCAGAGGGAGACACGTTGACCATGGAGGTGCTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
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| CDS TCA 72 bp | GAGAGGCACCCAACAGCGGTGGTGGGGAACTGCGGCTaGGAAGTTCTCCAGCATGTTCTGGGTGGTGACCCA | + |
|
Preference number: 6 (lower is better) Translates to: ERHPTAVVGNCG*EVLQHVLGGDP Trigger: TGGGTCACCACCCAGAACATGCTGGAGAACTTCTCAGCCGCAGTTCCCCACCACCGCTGTTGGGTGCCTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
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| CDS TCA 72 bp | GCTCCAGGTCAGCACCCTTCTGCGCCCAAACCTATCTaGGGCATGGCCACACACTGCGGCTCCTACCAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: APGQHPSAPKPI*GMATHCGSYQD Trigger: ATCCTGGTAGGAGCCGCAGTGTGTGGCCATGCCTCAGATAGGTTTGGGCGCAGAAGGGTGCTGACCTGGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS TCA 72 bp | GGGCTGCCACCTGGCAGAGGCCCACTGCAGTCATCCTaGTCACAGTGGGGAAGAGCTCACTGGAGAAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: GLPPGRGPLQSS*SQWGRAHWRRW Trigger: CCATCTTCTCCAGTGAGCTCTTCCCCACTGTGATCAGGATGACTGCAGTGGGCCTCTGCCAGGTGGCAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS GCA 72 bp | AGGGGGCAGAGACAGCCAGCTGTAGCATCCTCCAGCTaGGCACACCATAGGCCACAGAACCTGTCAGGACCT | + |
|
Preference number: 6 (lower is better) Translates to: RGQRQPAVASSS*AHHRPQNLSGP Trigger: AGGTCCTGACAGGTTCTGTGGCCTATGGTGTGCGCAGCTGGAGGATGCTACAGCTGGCTGTCTCTGCCCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS GCA 72 bp | TGGTTCGGTGGCGCAGCCCAGGTGTGTGGAGTAGAGTaGCCAGACTGGCACCAGCTTTGTCCCTGCTTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: WFGGAAQVCGVE*PDWHQLCPCLV Trigger: AACCAAGCAGGGACAAAGCTGGTGCCAGTCTGGGCACTCTACTCCACACACCTGGGCTGCGCCACCGAACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
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| CDS CCA 72 bp | GCGGCTCCTACCAGGATTCCAGCCAGGAAGATGGACTaGGCCATGGGTCTCAGGGCCTGGGAGTTACATACC | + |
|
Preference number: 6 (lower is better) Translates to: AAPTRIPARKMD*AMGLRAWELHT Trigger: GGTATGTAACTCCCAGGCCCTGAGACCCATGGCCCAGTCCATCTTCCTGGCTGGAATCCTGGTAGGAGCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
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| CDS CCA 72 bp | TTGACAGCAGCTACCCTCTGTAGTTCCTGCAGGCCCTaGTCCAGCTTGCCTACCGTGATGAGCCAGCGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LTAATLCSSCRP*SSLPTVMSQRA Trigger: GGCACGCTGGCTCATCACGGTAGGCAAGCTGGACCAGGGCCTGCAGGAACTACAGAGGGTAGCTGCTGTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
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| CDS CAA 72 bp | GCTACCCTCTGTAGTTCCTGCAGGCCCTGGTCCAGCTaGCCTACCGTGATGAGCCAGCGTGCCGATTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: ATLCSSCRPWSS*PTVMSQRADSG Trigger: ACCAGAATCGGCACGCTGGCTCATCACGGTAGGCAAGCTGGACCAGGGCCTGCAGGAACTACAGAGGGTAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
||
| CDS CCA 72 bp | AGAACATCGGGTCCAAGGTCCCCAGGGATACTCGCCTaGGAGGTGCTATTGTCCAGGAGAGGCACCCAACAG | + |
|
Preference number: 6 (lower is better) Translates to: RTSGPRSPGILA*EVLLSRRGTQQ Trigger: CTGTTGGGTGCCTCTCCTGGACAATAGCACCTCCCAGGCGAGTATCCCTGGGGACCTTGGACCCGATGTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
||
| CDS CCA 72 bp | ATGGAGATGATGGTTCGGTGGCGCAGCCCAGGTGTGTaGAGTAGAGTGCCCAGACTGGCACCAGCTTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: MEMMVRWRSPGV*SRVPRLAPALS Trigger: GGACAAAGCTGGTGCCAGTCTGGGCACTCTACTCCACACACCTGGGCTGCGCCACCGAACCATCATCTCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
||
| CDS CAA 72 bp | GGTGTGTGGAGTAGAGTGCCCAGACTGGCACCAGCTTaGTCCCTGCTTGGTTCCTCCTCCATAGCTGACCGC | + |
|
Preference number: 6 (lower is better) Translates to: GVWSRVPRLAPA*SLLGSSSIADR Trigger: GCGGTCAGCTATGGAGGAGGAACCAAGCAGGGACAAAGCTGGTGCCAGTCTGGGCACTCTACTCCACACACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
||
| CDS CAA 90 bp | TTGACAGCAGCTACCCTCTGTAGTTCCTGCAGGCCCTGGTCCAGCTaGCCTACCGTGATGAGCCAGCGTGCCGATTCTGGTAGCCACCAT | + |
|
Preference number: 6 (lower is better) Translates to: LTAATLCSSCRPWSS*PTVMSQRADSGSHH Trigger: ATGGTGGCTACCAGAATCGGCACGCTGGCTCATCACGGTAGGCAAGCTGGACCAGGGCCTGCAGGAACTACAGAGGGTAGCTGCTGTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
||
| CDS CAA 90 bp | TTGACAGCAGCTACCCTCTGTAGTTCCTGCAGGCCCTGGTCCAGCTaGCCTACCGTGATGAGCCAGCGTGCCGATTCTGGTAGCCACCTA | + |
|
Preference number: 6 (lower is better) Translates to: LTAATLCSSCRPWSS*PTVMSQRADSGSHL Trigger: TAGGTGGCTACCAGAATCGGCACGCTGGCTCATCACGGTAGGCAAGCTGGACCAGGGCCTGCAGGAACTACAGAGGGTAGCTGCTGTCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126142.2 |
||
| CDS TCA 72 bp | CCATGGTCAACGTGTCTCCCTCTGCCTTCCTCCTGTTaGCAGCAGCTACCCTCTGTAGTTCCTGCAGGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PWSTCLPLPSSC*QQLPSVVPAGP Trigger: AGGGCCTGCAGGAACTACAGAGGGTAGCTGCTGTCAACAGGAGGAAGGCAGAGGGAGACACGTTGACCATGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
||
| CDS TCA 72 bp | ACCAGCTTTGTCCCTGCTTGGTTCCTCCTCCATAGCTaGCCGCAGCACCTCCATGGTCAACGTGTCTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: TSFVPAWFLLHS*PQHLHGQRVSL Trigger: GAGGGAGACACGTTGACCATGGAGGTGCTGCGGTCAGCTATGGAGGAGGAACCAAGCAGGGACAAAGCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
||
| CDS GCA 72 bp | CGGACACCAGAAGATAGCTCCAGGTCAGCACCCTTCTaGGCCCAAACCTATCTGAGGCATGGCCACACACTG | + |
|
Preference number: 6 (lower is better) Translates to: RTPEDSSRSAPF*AQTYLRHGHTL Trigger: CAGTGTGTGGCCATGCCTCAGATAGGTTTGGGCGCAGAAGGGTGCTGACCTGGAGCTATCTTCTGGTGTCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
||
| CDS GCA 72 bp | TTCCTCCTGTTGACAGCAGCTACCCTCTGTAGTTCCTaGAGGCCCTGGTCCAGCTTGCCTACCGTGATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: FLLLTAATLCSS*RPWSSLPTVMS Trigger: GCTCATCACGGTAGGCAAGCTGGACCAGGGCCTGCAGGAACTACAGAGGGTAGCTGCTGTCAACAGGAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
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| CDS CAA 72 bp | TCCATGGTCAACGTGTCTCCCTCTGCCTTCCTCCTGTaGACAGCAGCTACCCTCTGTAGTTCCTGCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: SMVNVSPSAFLL*TAATLCSSCRP Trigger: GGGCCTGCAGGAACTACAGAGGGTAGCTGCTGTCAACAGGAGGAAGGCAGAGGGAGACACGTTGACCATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
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| CDS TCA 72 bp | GGCTGCCTGTCTTCACCGGGAAGTCCACAATCCCGATaGGTGCCTGGAGCAGGAAGATATTGCTTCCTAGGG | + |
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Preference number: 6 (lower is better) Translates to: GCLSSPGSPQSR*VPGAGRYCFLG Trigger: CCCTAGGAAGCAATATCTTCCTGCTCCAGGCACTCATCGGGATTGTGGACTTCCCGGTGAAGACAGGCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS CCA 72 bp | CCCAAGGCGTTCAAGGTCATCACCAAAGGGCTACCCTaGGCTGATGTCCACTCCATCAAGAGACTGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: PKAFKVITKGLP*ADVHSIKRLAV Trigger: CACAGCCAGTCTCTTGATGGAGTGGACATCAGCCCAGGGTAGCCCTTTGGTGATGACCTTGAACGCCTTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS CCA 72 bp | GTCTTCACCGGGAAGTCCACAATCCCGATGAGTGCCTaGAGCAGGAAGATATTGCTTCCTAGGGCTTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VFTGKSTIPMSA*SRKILLPRACR Trigger: CCTGCAAGCCCTAGGAAGCAATATCTTCCTGCTCCAGGCACTCATCGGGATTGTGGACTTCCCGGTGAAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000113451.9 ENSMUST00000126142.2 |
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| CDS TCA 72 bp | GGCGTTCAAGGTCATCACCAAAGGGCTACCCTGGGCTaGTGTCCACTCCATCAAGAGACTGGCTGTGTTCAT | + |
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Preference number: 6 (lower is better) Translates to: GVQGHHQRATLG*CPLHQETGCVH Trigger: ATGAACACAGCCAGTCTCTTGATGGAGTGGACATCAGCCCAGGGTAGCCCTTTGGTGATGACCTTGAACGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS CCA 72 bp | GGATGTCTTGGATGGTGTCAGGCAGTGGTAAGTTCTTaGTCTCAGGCAGCAGCAGTGCAGCTAGGCCACTTA | + |
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Preference number: 6 (lower is better) Translates to: GCLGWCQAVVSS*SQAAAVQLGHL Trigger: TAAGTGGCCTAGCTGCACTGCTGCTGCCTGAGACCAAGAACTTACCACTGCCTGACACCATCCAAGACATCC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS TCA 72 bp | ATGTCCACTCCATCAAGAGACTGGCTGTGTTCATCATaGCACCTGCCACTGCAGAGGCCAGCAGGAAACGAA | + |
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Preference number: 6 (lower is better) Translates to: MSTPSRDWLCSS*HLPLQRPAGNE Trigger: TTCGTTTCCTGCTGGCCTCTGCAGTGGCAGGTGTCATGATGAACACAGCCAGTCTCTTGATGGAGTGGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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| CDS CCA 72 bp | GGTGTGTCATGTGTTACCTTCTTCACTGACTGTTTCTaGATGTCTTGGATGGTGTCAGGCAGTGGTAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: GVSCVTFFTDCF*MSWMVSGSGKF Trigger: GAACTTACCACTGCCTGACACCATCCAAGACATCCAGAAACAGTCAGTGAAGAAGGTAACACATGACACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113451.9 |
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