Pregenerated sensors for SLC22A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023829Ensembl transcript IDs: ENSMUST00000024596.10, ENSMUST00000233691.2
Found 73 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGGGGGTGCGGAACAGGTCTGCAAACGAAGGACTCCGCCTCTCTaGGGCATCTTCCTCAAGGCACATCATCTTCAGGTCAGCAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: AGGAEQVCKRRTPPL*GIFLKAHHLQVSRG Trigger: CCCCCTGCTGACCTGAAGATGATGTGCCTTGAGGAAGATGCCTCAGAGAGGCGGAGTCCTTCGTTTGCAGACCTGTTCCGCACCCCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR TCA 90 bp | GGCCCTGGTACAGCACAGCACAAGAGAACCATAGATACATCAGGATaGGGGTGTGCTTCCTCAGGCTGGGGGTGCGGAACAGGTCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: GPGTAQHKRTIDTSG*GCASSGWGCGTGLQ Trigger: TTGCAGACCTGTTCCGCACCCCCAGCCTGAGGAAGCACACCCTCATCCTGATGTATCTATGGTTCTCTTGTGCTGTGCTGTACCAGGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR GCA 90 bp | GTGGCTCCCATACGGCCAAGACAAGCGAGGGTCACATTCAACCAATaGAGCTCATGTGGGATAAAGATCATGAGGAGGCAGGCTGCCCCC | + |
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Preference number: 1 (lower is better) Translates to: VAPIRPRQARVTFNQ*SSCGIKIMRRQAAP Trigger: GGGGGCAGCCTGCCTCCTCATGATCTTTATCCCACATGAGCTGCATTGGTTGAATGTGACCCTCGCTTGTCTTGGCCGTATGGGAGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR CCA 90 bp | ACGGCCAAGACAAGCGAGGGTCACATTCAACCAATGCAGCTCATGTaGGATAAAGATCATGAGGAGGCAGGCTGCCCCCGCCACCAGATT | + |
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Preference number: 1 (lower is better) Translates to: TAKTSEGHIQPMQLM*DKDHEEAGCPRHQI Trigger: AATCTGGTGGCGGGGGCAGCCTGCCTCCTCATGATCTTTATCCCACATGAGCTGCATTGGTTGAATGTGACCCTCGCTTGTCTTGGCCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR TCA 90 bp | AATCTTCCAAGTGGCCAGTCCTCCTTCCTCTCTCCACTCAGCTCCTaGCACGGCATCCCTGTCAGGTATGTGGGGATTTGCCTGTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: NLPSGQSSFLSPLSS*HGIPVRYVGICLFG Trigger: TCCAAACAGGCAAATCCCCACATACCTGACAGGGATGCCGTGTCAGGAGCTGAGTGGAGAGAGGAAGGAGGACTGGCCACTTGGAAGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR GCA 90 bp | TACAGCACAGCACAAGAGAACCATAGATACATCAGGATGAGGGTGTaGTTCCTCAGGCTGGGGGTGCGGAACAGGTCTGCAAACGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: YSTAQENHRYIRMRV*FLRLGVRNRSANEG Trigger: TCCTTCGTTTGCAGACCTGTTCCGCACCCCCAGCCTGAGGAAGCACACCCTCATCCTGATGTATCTATGGTTCTCTTGTGCTGTGCTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR-3UTR TCA 90 bp | CTGAGGCATCTTCCTCAAGGCACATCATCTTCAGGTCAGCAGGGGGCACCTTCCCGCCAGACAGGGAGGTaGCCAGAGTGGTCACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LRHLPQGTSSSGQQGAPSRQTGR*PEWSPG Trigger: TCCTGGTGACCACTCTGGTCACCTCCCTGTCTGGCG...GGAAGGTGCCCCCTGCTGACCTGAAGATGATGTGCCTTGAGGAAGATGCCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAGCTCATGTGGGATAAAGATCATGAGGAGGCAGGCTGCCCCCGCCACCAGACCGCTATTGGGTAGATaGGGCCAATGCGGTCAATGG | + |
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Preference number: 2 (lower is better) Translates to: CSSCGIKIMRRQAAPATRPLLGR*GQCGQW Trigger: CCATTGACCGCATTGGCCGCATCTACCCAATAGCGG...TCTGGTGGCGGGGGCAGCCTGCCTCCTCATGATCTTTATCCCACATGAGCTGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR-3UTR CCA 90 bp | GCTTCCTCAGGCTGGGGGTGCGGAACAGGTCTGCAAACGAAGGACTCCGCCTCTGGCGAAAGAGCAACATaGATGTATAGTCTGGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: ASSGWGCGTGLQTKDSASGERAT*MYSLGP Trigger: TGGCCCCAGACTATACATCCATGTTGCTCTTTCGCC...AGAGGCGGAGTCCTTCGTTTGCAGACCTGTTCCGCACCCCCAGCCTGAGGAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR-3UTR CCA 90 bp | CATCATCTTCAGGTCAGCAGGGGGCACCTTCCTGTTCTTCTGTGCAATTTGCTCAGGGACACCGCCAGCTaGAGCCAGCGCCAGTCTGGA | + |
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Preference number: 2 (lower is better) Translates to: HHLQVSRGHLPVLLCNLLRDTAS*SQRQSG Trigger: TCCAGACTGGCGCTGGCTCCAGCTGGCGGTGTCCCT...GAGCAAATTGCACAGAAGAACAGGAAGGTGCCCCCTGCTGACCTGAAGATGATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR-3UTR CCA 90 bp | CATCATCTTCAGGTCAGCAGGGGGCACCTTCCTGTTCTTCTGTGCAATTTGCTCAGCGCCAGTCTGGAATaGCATAGGCCACCCCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: HHLQVSRGHLPVLLCNLLSASLE*HRPPQQ Trigger: TTGCTGGGGTGGCCTATGCCATTCCAGACTGGCGCT...GAGCAAATTGCACAGAAGAACAGGAAGGTGCCCCCTGCTGACCTGAAGATGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTCCTCTCTCCACTCAGCTCCTGACACGGCATCCCTGTCAGGTATGTGGGGATCATTTGGAACCTGGTaGATATATAGAAGTGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: PSSLHSAPDTASLSGMWGSFGTW*IYRSVW Trigger: CCAGACACTTCTATATATTCACCAGGTTCCAAATGA...TCCCCACATACCTGACAGGGATGCCGTGTCAGGAGCTGAGTGGAGAGAGGAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR-3UTR CCA 90 bp | TATGTGGGGATTTGCCTGTTTGGACCTGAAGGTAAATCGTGTTTTCTTTGGCCTAGTCCAGGTAGAGGTTaGCCCCTGTGGCTCCCACAT | + |
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Preference number: 2 (lower is better) Translates to: YVGICLFGPEGKSCFLWPSPGRG*PLWLPH Trigger: ATGTGGGAGCCACAGGGGCCAACCTCTACCTGGACT...AGGCCAAAGAAAACACGATTTACCTTCAGGTCCAAACAGGCAAATCCCCACATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR GCA 72 bp | GCACAAGAGAACCATAGATACATCAGGATGAGGGTGTaGTTCCTCAGGCTGGGGGTGCGGAACAGGTCTGCA | + |
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Preference number: 3 (lower is better) Translates to: AQENHRYIRMRV*FLRLGVRNRSA Trigger: TGCAGACCTGTTCCGCACCCCCAGCCTGAGGAAGCACACCCTCATCCTGATGTATCTATGGTTCTCTTGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR TCA 72 bp | ACAGCACAGCACAAGAGAACCATAGATACATCAGGATaGGGGTGTGCTTCCTCAGGCTGGGGGTGCGGAACA | + |
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Preference number: 3 (lower is better) Translates to: TAQHKRTIDTSG*GCASSGWGCGT Trigger: TGTTCCGCACCCCCAGCCTGAGGAAGCACACCCTCATCCTGATGTATCTATGGTTCTCTTGTGCTGTGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR CCA 72 bp | TTGGCCCCTGTGGCTCCCACATGCATGATGAGGCCCTaGTACAGCACAGCACAAGAGAACCATAGATACATC | + |
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Preference number: 3 (lower is better) Translates to: LAPVAPTCMMRP*YSTAQENHRYI Trigger: GATGTATCTATGGTTCTCTTGTGCTGTGCTGTACCAGGGCCTCATCATGCATGTGGGAGCCACAGGGGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR CCA 72 bp | CACTCAGCTCCTGACACGGCATCCCTGTCAGGTATGTaGGGATTTGCCTGTTTGGACCTGAAGGTAAATCGT | + |
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Preference number: 3 (lower is better) Translates to: HSAPDTASLSGM*GFACLDLKVNR Trigger: ACGATTTACCTTCAGGTCCAAACAGGCAAATCCCCACATACCTGACAGGGATGCCGTGTCAGGAGCTGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR GCA 72 bp | ATACGGCCAAGACAAGCGAGGGTCACATTCAACCAATaGAGCTCATGTGGGATAAAGATCATGAGGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: IRPRQARVTFNQ*SSCGIKIMRRQ Trigger: CTGCCTCCTCATGATCTTTATCCCACATGAGCTGCATTGGTTGAATGTGACCCTCGCTTGTCTTGGCCGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGCACATCATCTTCAGGTCAGCAGGGGGCACCTTCCTGTTCTTCTGTGCAATAGGTTGGGAATTCATTaGGAACCTGGTGAATATATA | + |
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Preference number: 3 (lower is better) Translates to: KAHHLQVSRGHLPVLLCNRLGIH*EPGEYI Trigger: TATATATTCACCAGGTTCCAAATGAATTCCCAACCT...ATTGCACAGAAGAACAGGAAGGTGCCCCCTGCTGACCTGAAGATGATGTGCCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| 3UTR TCA 72 bp | AAAGTCTTTAAGGTTGGGAATTCATTTGGAACCTGGTaGATATATAGAAGTGTCTGGGAAGGCAAAGGCTTC | + |
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Preference number: 3 (lower is better) Translates to: KVFKVGNSFGTW*IYRSVWEGKGF Trigger: GAAGCCTTTGCCTTCCCAGACACTTCTATATATTCACCAGGTTCCAAATGAATTCCCAACCTTAAAGACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024596.10 ENSMUST00000233691.2 |
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| CDS-3UTR CCA 90 bp | GATGAGGGTGTGCTTCCTCAGGCTGGGGGTGCGGAACAGGTCTGCAAACGAAGGCCAGGACTCCGGCAGTaGTGGTCGGGGGTGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: DEGVLPQAGGAEQVCKRRPGLRQ*WSGVKP Trigger: GGGCTTCACCCCCGACCACCACTGCCGGAGTCCTGG...CCTTCGTTTGCAGACCTGTTCCGCACCCCCAGCCTGAGGAAGCACACCCTCATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| CDS-3UTR GCA 90 bp | GAGGAAGGTGGGCAGGGACACCGCCAGCTGGAGCCAGCGCCAGTCTGGAATGGCCCAAACTCTCCAACGTaGTCCAGGACATCGTCCACG | + |
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Preference number: 4 (lower is better) Translates to: EEGGQGHRQLEPAPVWNGPNSPT*SRTSST Trigger: CGTGGACGATGTCCTGGAGCACGTTGGAGAGTTTGG...GCCATTCCAGACTGGCGCTGGCTCCAGCTGGCGGTGTCCCTGCCCACCTTCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| CDS-3UTR GCA 90 bp | TACATCAGGATGAGGGTGTGCTTCCTCAGGCTGGGGGTGCGGAACAGGTCTGCAGTAGTTCAGCTCCTCTaGCGGGCTCCAGCCACACCG | + |
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Preference number: 4 (lower is better) Translates to: YIRMRVCFLRLGVRNRSAVVQLL*RAPATP Trigger: CGGTGTGGCTGGAGCCCGGCAGAGGAGCTGAACTAC...TGCAGACCTGTTCCGCACCCCCAGCCTGAGGAAGCACACCCTCATCCTGATGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| CDS-3UTR CCA 90 bp | GAGGAAGGTGGGCAGGGACACCGCCAGCTGGAGCCAGCGCCAGTCTGGAATGGCCGATGCCCACGTAGATaGGAGCTAAAGAAGCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: EEGGQGHRQLEPAPVWNGRCPRR*ELKKLR Trigger: TCTCAGCTTCTTTAGCTCCCATCTACGTGGGCATCG...GCCATTCCAGACTGGCGCTGGCTCCAGCTGGCGGTGTCCCTGCCCACCTTCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| CDS-3UTR TCA 90 bp | CCTTCCTCTCTCCACTCAGCTCCTGACACGGCATCCCTGTCAGGTATGTGGGGAAGTGGTGGTCGGGGGTaGAGCCCAGGAAAACGATGC | + |
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Preference number: 4 (lower is better) Translates to: PSSLHSAPDTASLSGMWGSGGRG*SPGKRC Trigger: GCATCGTTTTCCTGGGCTTCACCCCCGACCACCACT...TCCCCACATACCTGACAGGGATGCCGTGTCAGGAGCTGAGTGGAGAGAGGAAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| CDS-3UTR CCA 90 bp | GGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCTCCTTCCTCTCTCAGGGACACCGCCAGCTaGAGCCAGCGCCAGTCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GRQRLLGIFQVASPPSSLRDTAS*SQRQSG Trigger: TCCAGACTGGCGCTGGCTCCAGCTGGCGGTGTCCCT...GAGAGAGGAAGGAGGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR GCA 90 bp | GGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCTCCTTCCTCTCTCGTAGTTCAGCTCCTCTaGCGGGCTCCAGCCACACCG | + |
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Preference number: 4 (lower is better) Translates to: GRQRLLGIFQVASPPSSLVVQLL*RAPATP Trigger: CGGTGTGGCTGGAGCCCGGCAGAGGAGCTGAACTAC...GAGAGAGGAAGGAGGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024596.10 ENSMUST00000233691.2 |
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| 3UTR CAA 72 bp | TCCGCTTCTTCAATAGTCTCAGGCAGAGCCACGCCCTaGGTCTCCGGAAGTAGAAGGGTCACAGCCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SASSIVSGRATP*VSGSRRVTAPA Trigger: TGCTGGGGCTGTGACCCTTCTACTTCCGGAGACCAAGGGCGTGGCTCTGCCTGAGACTATTGAAGAAGCGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| CDS-3UTR TCA 90 bp | GGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCTCCTTCCTCTCTCCCCAGCTGCCTTTGCTaGCCATGCCTTGCAGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: GRQRLLGIFQVASPPSSLPSCLC*PCLAEG Trigger: GCCTTCTGCAAGGCATGGTCAGCAAAGGCAGCTGGG...GAGAGAGGAAGGAGGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR TCA 90 bp | ATAGAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCCGCCAGACAGGGAGGTaGCCAGAGTGGTCACCAGGA | + |
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Preference number: 4 (lower is better) Translates to: IEVSGKAKASRNLPSGQSRQTGR*PEWSPG Trigger: TCCTGGTGACCACTCTGGTCACCTCCCTGTCTGGCG...GGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTCTAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR GCA 90 bp | GTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCTCCTTCATCAGGATGAGGGTGTaGTTCCTCAGGCTGGGGGTG | + |
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Preference number: 4 (lower is better) Translates to: VSGKAKASRNLPSGQSSFIRMRV*FLRLGV Trigger: CACCCCCAGCCTGAGGAAGCACACCCTCATCCTGAT...GAAGGAGGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR CCA 90 bp | AAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCTCCTTGTGCTTCCTCAGGCTaGGGGTGCGGAACAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: KCLGRQRLLGIFQVASPPCASSG*GCGTGL Trigger: CAGACCTGTTCCGCACCCCCAGCCTGAGGAAGCACA...AGGAGGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR TCA 90 bp | AAGGCACATCATCTTCAGGTCAGCAGGGGGCACCTTCCTGTTCTTCTGTGCAATACTTCATGCATTGGCTaGGGAAGGAGGCCTCACCCG | + |
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Preference number: 4 (lower is better) Translates to: KAHHLQVSRGHLPVLLCNTSCIG*GRRPHP Trigger: CGGGTGAGGCCTCCTTCCTCAGCCAATGCATGAAGT...ATTGCACAGAAGAACAGGAAGGTGCCCCCTGCTGACCTGAAGATGATGTGCCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| CDS-3UTR GCA 90 bp | GAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCTCCCCAAACTCTCCAACGTaGTCCAGGACATCGTCCACG | + |
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Preference number: 4 (lower is better) Translates to: EVSGKAKASRNLPSGQSSPNSPT*SRTSST Trigger: CGTGGACGATGTCCTGGAGCACGTTGGAGAGTTTGG...GGAGGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024596.10 ENSMUST00000233691.2 |
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| CDS-3UTR GCA 90 bp | GTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCTCCTTCCCACACAGTCAAGGGTaGTCTGGTTCCAGTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: VSGKAKASRNLPSGQSSFPHSQG*SGSSPP Trigger: AGGTGGACTGGAACCAGAGCACCCTTGACTGTGTGG...GAAGGAGGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024596.10 ENSMUST00000233691.2 |
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| CDS-3UTR CCA 90 bp | CCTGGTGAATATATAGAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAGGACTCCGGCAGTGGTaGTCGGGGGTGAAGCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PGEYIEVSGKAKASRNLPGLRQW*SGVKPR Trigger: CCTGGGCTTCACCCCCGACCACCACTGCCGGAGTCC...TGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTCTATATATTCACCAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024596.10 ENSMUST00000233691.2 |
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| CDS-3UTR GCA 90 bp | GGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCTCCTTCCTCTCTCAGCCCAGGAAAACGATaGCCACGTAGATGGGAGCTA | + |
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Preference number: 4 (lower is better) Translates to: GRQRLLGIFQVASPPSSLSPGKR*PRRWEL Trigger: TAGCTCCCATCTACGTGGGCATCGTTTTCCTGGGCT...GAGAGAGGAAGGAGGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024596.10 ENSMUST00000233691.2 |
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| CDS-3UTR GCA 90 bp | ATAGAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCCCTGTGGCTCCCACATaGATGATGAGGCCCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: IEVSGKAKASRNLPSGQSPVAPT*MMRPWY Trigger: GTACCAGGGCCTCATCATGCATGTGGGAGCCACAGG...GGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR CCA 90 bp | GGTGAATATATAGAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTCCAGGACTCCGGCAGTaGTGGTCGGGGGTGAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: GEYIEVSGKAKASRNLPSPGLRQ*WSGVKP Trigger: GGGCTTCACCCCCGACCACCACTGCCGGAGTCCTGG...ACTTGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTCTATATATTCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024596.10 ENSMUST00000233691.2 |
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| 3UTR CAA 72 bp | GTAGCCAGACACCCAGCTGCCTTTGCTGACCATGCCTaGCAGAAGGCGAAAGAGCAACATGGATGTATAGTC | + |
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Preference number: 4 (lower is better) Translates to: VARHPAAFADHA*QKAKEQHGCIV Trigger: GACTATACATCCATGTTGCTCTTTCGCCTTCTGCAAGGCATGGTCAGCAAAGGCAGCTGGGTGTCTGGCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| CDS-3UTR TCA 90 bp | GAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCTCCATAGATACATCAGGATaGGGGTGTGCTTCCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: EVSGKAKASRNLPSGQSSIDTSG*GCASSG Trigger: GCCTGAGGAAGCACACCCTCATCCTGATGTATCTAT...GGAGGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR GCA 90 bp | GGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCTCCTTCCTCTCTCAGCAACAGGAAGGCTTaGTTCTGGAACCAGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: GRQRLLGIFQVASPPSSLSNRKA*FWNQPN Trigger: GTTTGGCTGGTTCCAGAAGCAAGCCTTCCTGTTGCT...GAGAGAGGAAGGAGGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024596.10 ENSMUST00000233691.2 |
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| CDS-3UTR GCA 90 bp | GAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCTCCACGGCCAAACCTGTCTaGAATGTAACCCACAACCAG | + |
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Preference number: 4 (lower is better) Translates to: EVSGKAKASRNLPSGQSSTAKPV*NVTHNQ Trigger: CTGGTTGTGGGTTACATTGCAGACAGGTTTGGCCGT...GGAGGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR CCA 90 bp | GGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCTCCTTCCTCTCTCCGATGCCCACGTAGATaGGAGCTAAAGAAGCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: GRQRLLGIFQVASPPSSLRCPRR*ELKKLR Trigger: TCTCAGCTTCTTTAGCTCCCATCTACGTGGGCATCG...GAGAGAGGAAGGAGGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024596.10 ENSMUST00000233691.2 |
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| CDS-3UTR TCA 90 bp | CCTGGTGAATATATAGAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGTGGTCGGGGGTaGAGCCCAGGAAAACGATGC | + |
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Preference number: 4 (lower is better) Translates to: PGEYIEVSGKAKASRNLPSGGRG*SPGKRC Trigger: GCATCGTTTTCCTGGGCTTCACCCCCGACCACCACT...TGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTCTATATATTCACCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024596.10 ENSMUST00000233691.2 |
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| CDS-3UTR GCA 90 bp | CCTGGTGAATATATAGAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCATCCTCAGGCTGGGGGTaGGGAACAGGTCTGCAAACG | + |
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Preference number: 4 (lower is better) Translates to: PGEYIEVSGKAKASRNLPSSGWG*GTGLQT Trigger: CGTTTGCAGACCTGTTCCGCACCCCCAGCCTGAGGA...TGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTCTATATATTCACCAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR CCA 90 bp | ATCATCTTCAGGTCAGCAGGGGGCACCTTCCTGTTCTTCTGTGCAATTTGCTCCAGGAAGGCTTGCTTCTaGAACCAGCCAAACTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: IIFRSAGGTFLFFCAICSRKACF*NQPNSP Trigger: TGGAGAGTTTGGCTGGTTCCAGAAGCAAGCCTTCCT...GGAGCAAATTGCACAGAAGAACAGGAAGGTGCCCCCTGCTGACCTGAAGATGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| CDS-3UTR CCA 90 bp | TATATAGAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGAGTCCAGGTAGAGGTTaGCCCCTGTGGCTCCCACAT | + |
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Preference number: 4 (lower is better) Translates to: YIEVSGKAKASRNLPSGQSPGRG*PLWLPH Trigger: ATGTGGGAGCCACAGGGGCCAACCTCTACCTGGACT...CTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTCTATATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR CCA 90 bp | ATAGAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCGGCGAAAGAGCAACATaGATGTATAGTCTGGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: IEVSGKAKASRNLPSGQSGERAT*MYSLGP Trigger: TGGCCCCAGACTATACATCCATGTTGCTCTTTCGCC...GGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR CCA 90 bp | CCTGGTGAATATATAGAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGCGCCAGTCTGGAATaGCATAGGCCACCCCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: PGEYIEVSGKAKASRNLPSASLE*HRPPQQ Trigger: TTGCTGGGGTGGCCTATGCCATTCCAGACTGGCGCT...TGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTCTATATATTCACCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| 3UTR CAA 72 bp | GTTCTTCTGTGCAATTTGCTCCATTATCCTTACCGCTaGAGTGGTTCTCTTCTGAGACAACAGCCACCGGGG | + |
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Preference number: 4 (lower is better) Translates to: VLLCNLLHYPYR*SGSLLRQQPPG Trigger: CCCCGGTGGCTGTTGTCTCAGAAGAGAACCACTCAAGCGGTAAGGATAATGGAGCAAATTGCACAGAAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| CDS-3UTR GCA 90 bp | GGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCTCCTTCCTCTCTCGTCACATTCAACCAATaGAGCTCATGTGGGATAAAG | + |
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Preference number: 4 (lower is better) Translates to: GRQRLLGIFQVASPPSSLVTFNQ*SSCGIK Trigger: CTTTATCCCACATGAGCTGCATTGGTTGAATGTGAC...GAGAGAGGAAGGAGGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| 3UTR CAA 72 bp | ACGGCATCCCTGTCAGGTATGTGGGGATTTGCCTGTTaGGACCTGAAGGTAAATCGTGTTTTCTTTGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TASLSGMWGFAC*DLKVNRVFFGL Trigger: AAGGCCAAAGAAAACACGATTTACCTTCAGGTCCAAACAGGCAAATCCCCACATACCTGACAGGGATGCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| CDS-3UTR TCA 90 bp | TTGGGAATTCATTTGGAACCTGGTGAATATATAGAAGTGTCTGGGAAGGCAAAGACTTCATGCATTGGCTaGGGAAGGAGGCCTCACCCG | + |
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Preference number: 4 (lower is better) Translates to: LGIHLEPGEYIEVSGKAKTSCIG*GRRPHP Trigger: CGGGTGAGGCCTCCTTCCTCAGCCAATGCATGAAGT...CTTTGCCTTCCCAGACACTTCTATATATTCACCAGGTTCCAAATGAATTCCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024596.10 ENSMUST00000233691.2 |
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| CDS-3UTR GCA 90 bp | GGTGAATATATAGAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTCCACACAGTCAAGGGTaGTCTGGTTCCAGTCCACCT | + |
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Preference number: 4 (lower is better) Translates to: GEYIEVSGKAKASRNLPSPHSQG*SGSSPP Trigger: AGGTGGACTGGAACCAGAGCACCCTTGACTGTGTGG...ACTTGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTCTATATATTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024596.10 ENSMUST00000233691.2 |
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| CDS-3UTR GCA 90 bp | GGTGAATATATAGAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTCCGCTATTGGGTAGATaGGGCCAATGCGGTCAATGG | + |
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Preference number: 4 (lower is better) Translates to: GEYIEVSGKAKASRNLPSPLLGR*GQCGQW Trigger: CCATTGACCGCATTGGCCGCATCTACCCAATAGCGG...ACTTGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTCTATATATTCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR CCA 90 bp | TATATAGAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGAGGAAGGCTTGCTTCTaGAACCAGCCAAACTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: YIEVSGKAKASRNLPSGQRKACF*NQPNSP Trigger: TGGAGAGTTTGGCTGGTTCCAGAAGCAAGCCTTCCT...CTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTCTATATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024596.10 ENSMUST00000233691.2 |
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| CDS-3UTR GCA 90 bp | CCTGGTGAATATATAGAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGCAACAGGAAGGCTTaGTTCTGGAACCAGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: PGEYIEVSGKAKASRNLPSNRKA*FWNQPN Trigger: GTTTGGCTGGTTCCAGAAGCAAGCCTTCCTGTTGCT...TGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTCTATATATTCACCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024596.10 ENSMUST00000233691.2 |
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| CDS-3UTR CCA 90 bp | GGTGAATATATAGAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTTGCATGATGAGGCCCTaGTACAGCACAGCACAAGAG | + |
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Preference number: 4 (lower is better) Translates to: GEYIEVSGKAKASRNLPSCMMRP*YSTAQE Trigger: CTCTTGTGCTGTGCTGTACCAGGGCCTCATCATGCA...ACTTGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTCTATATATTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR CCA 90 bp | CCTGGTGAATATATAGAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCATCCTTACCGCTTGAGTaGTTCTCTTCTGAGACAACA | + |
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Preference number: 4 (lower is better) Translates to: PGEYIEVSGKAKASRNLPSLPLE*FSSETT Trigger: TGTTGTCTCAGAAGAGAACCACTCAAGCGGTAAGGA...TGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTCTATATATTCACCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR TCA 90 bp | TTGGGAATTCATTTGGAACCTGGTGAATATATAGAAGTGTCTGGGAAGGCAAAGGTTTTCTTTGGCCTTTaGTTTCCTCCTTCCCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: LGIHLEPGEYIEVSGKAKVFFGL*FPPSQV Trigger: AACCTGGGAAGGAGGAAATCAAAGGCCAAAGAAAAC...CTTTGCCTTCCCAGACACTTCTATATATTCACCAGGTTCCAAATGAATTCCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR CCA 90 bp | TTGGGAATTCATTTGGAACCTGGTGAATATATAGAAGTGTCTGGGAAGGCAAAGCCAATGCAGCTCATGTaGGATAAAGATCATGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: LGIHLEPGEYIEVSGKAKPMQLM*DKDHEE Trigger: CTCCTCATGATCTTTATCCCACATGAGCTGCATTGG...CTTTGCCTTCCCAGACACTTCTATATATTCACCAGGTTCCAAATGAATTCCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| 3UTR CAA 72 bp | GGACTTTCAGAAAAGTCTTTAAGGTTGGGAATTCATTaGGAACCTGGTGAATATATAGAAGTGTCTGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: GLSEKSLRLGIH*EPGEYIEVSGK Trigger: CTTCCCAGACACTTCTATATATTCACCAGGTTCCAAATGAATTCCCAACCTTAAAGACTTTTCTGAAAGTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| CDS-3UTR CAA 90 bp | GGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCTCCTTCCTCTCTCGGCAAGTGGCTCCTGTaGGCAGCCAGGCTGGACAGT | + |
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Preference number: 5 (lower is better) Translates to: GRQRLLGIFQVASPPSSLGKWLL*AARLDS Trigger: ACTGTCCAGCCTGGCTGCCAACAGGAGCCACTTGCC...GAGAGAGGAAGGAGGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024596.10 ENSMUST00000233691.2 |
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| CDS-3UTR CAA 90 bp | GCTTGCCAAACTTCCATCAGCCTGAACACCATGAAGGGGGTGAAGATCCCACCTGGCAAGTGGCTCCTGTaGGCAGCCAGGCTGGACAGT | + |
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Preference number: 5 (lower is better) Translates to: ACQTSISLNTMKGVKIPPGKWLL*AARLDS Trigger: ACTGTCCAGCCTGGCTGCCAACAGGAGCCACTTGCC...AGGTGGGATCTTCACCCCCTTCATGGTGTTCAGGCTGATGGAAGTTTGGCAAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233691.2 |
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| CDS-3UTR CAA 90 bp | GAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCTCCTGGGGATTTGCCTGTTaGGACCTGAAGGTAAATCGT | + |
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Preference number: 5 (lower is better) Translates to: EVSGKAKASRNLPSGQSSWGFAC*DLKVNR Trigger: ACGATTTACCTTCAGGTCCAAACAGGCAAATCCCCA...GGAGGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR CAA 90 bp | GAAGTGTCTGGGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCTCCGTTCTTCTGTGCAATTaGCTCCATTATCCTTACCGC | + |
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Preference number: 5 (lower is better) Translates to: EVSGKAKASRNLPSGQSSVLLCN*LHYPYR Trigger: GCGGTAAGGATAATGGAGCAAATTGCACAGAAGAAC...GGAGGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCCCAGACACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR CAA 90 bp | GGAAGGCAAAGGCTTCTAGGAATCTTCCAAGTGGCCAGTCCTCCTTCCTCTCTCTGTTTTCTTTGGCCTTaGATTTCCTCCTTCCCAGGT | + |
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Preference number: 5 (lower is better) Translates to: GRQRLLGIFQVASPPSSLCFLWP*ISSFPG Trigger: ACCTGGGAAGGAGGAAATCAAAGGCCAAAGAAAACA...GAGAGAGGAAGGAGGACTGGCCACTTGGAAGATTCCTAGAAGCCTTTGCCTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS-3UTR CAA 90 bp | TTGGGAATTCATTTGGAACCTGGTGAATATATAGAAGTGTCTGGGAAGGCAAAGAATGAGGGGCAGGGCTaGCCAAACTTCCATCAGCCT | + |
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Preference number: 5 (lower is better) Translates to: LGIHLEPGEYIEVSGKAKNEGQG*PNFHQP Trigger: AGGCTGATGGAAGTTTGGCAAGCCCTGCCCCTCATT...CTTTGCCTTCCCAGACACTTCTATATATTCACCAGGTTCCAAATGAATTCCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS TCA 72 bp | CTGGGGCCACCGCTGTTAACACGCCAGACAGGGAGGTaGCCAGAGTGGTCACCAGGAGGCAGAGCTTACGGC | + |
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Preference number: 6 (lower is better) Translates to: LGPPLLTRQTGR*PEWSPGGRAYG Trigger: GCCGTAAGCTCTGCCTCCTGGTGACCACTCTGGTCACCTCCCTGTCTGGCGTGTTAACAGCGGTGGCCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS CCA 72 bp | CATGCTCGCAGGGGCTCAGTGGCAAGTGGCTCCTGTTaGCAGCCAGGCTGGACAGTGGGTCCACACAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: HARRGSVASGSC*QPGWTVGPHSQ Trigger: TTGACTGTGTGGACCCACTGTCCAGCCTGGCTGCCAACAGGAGCCACTTGCCACTGAGCCCCTGCGAGCATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024596.10 ENSMUST00000233691.2 |
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| CDS TCA 72 bp | AGGGAGCCCAGGAAGAAGCCCAAGTTCACACAGGACTaGAAAAGGTCCACTTTCCAGGCGTCTCCACACACC | + |
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Preference number: 6 (lower is better) Translates to: REPRKKPKFTQD*KRSTFQASPHT Trigger: GGTGTGTGGAGACGCCTGGAAAGTGGACCTTTTTCAGTCCTGTGTGAACTTGGGCTTCTTCCTGGGCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024596.10 |
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| CDS GCA 72 bp | AAAGAAGCTGAGATCAGGCATAGCAACAGGAAGGCTTaGTTCTGGAACCAGCCAAACTCTCCAACGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: KEAEIRHSNRKA*FWNQPNSPTCS Trigger: GGAGCACGTTGGAGAGTTTGGCTGGTTCCAGAAGCAAGCCTTCCTGTTGCTATGCCTGATCTCAGCTTCTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024596.10 ENSMUST00000233691.2 |
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