Pregenerated sensors for SLC20A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027397Ensembl transcript IDs: ENSMUST00000028880.10, ENSMUST00000110315.2
Found 148 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTTACATGTTGTTAAATCCCTGTGCATGTTGGGGAAGAAGCTGGTaGGGCCGACAAAGCAGTACATGCCATCAAATGGCTCTGCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: SYMLLNPCACWGRSW*GRQSSTCHQMALPG Trigger: GCCAGGCAGAGCCATTTGATGGCATGTACTGCTTTGTCGGCCTCACCAGCTTCTTCCCCAACATGCACAGGGATTTAACAACATGTAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| 3UTR GCA 90 bp | GACTATGAGGGAGGGAAGCTTCAGTTACATGTTGTTAAATCCCTGTaGATGTTGGGGAAGAAGCTGGTGAGGCCGACAAAGCAGTACATG | + |
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Preference number: 1 (lower is better) Translates to: DYEGGKLQLHVVKSL*MLGKKLVRPTKQYM Trigger: CATGTACTGCTTTGTCGGCCTCACCAGCTTCTTCCCCAACATGCACAGGGATTTAACAACATGTAACTGAAGCTTCCCTCCCTCATAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAGTTGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCTGGGGAAGAAGCTGGTaGGGCCGACAAAGCAGTACA | + |
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Preference number: 2 (lower is better) Translates to: RSCHTSTEPATSDREQSAWGRSW*GRQSST Trigger: TGTACTGCTTTGTCGGCCTCACCAGCTTCTTCCCCA...GGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACAACTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTTTGTCTCCCTGCTTCTTAGCAACATGTCCGTGAACTGTTTGCAAAGAGGTAATGGTCCCAGACACTaGCACAGCTTTCAACCCCAG | + |
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Preference number: 2 (lower is better) Translates to: GFVSLLLSNMSVNCLQRGNGPRH*HSFQPQ Trigger: CTGGGGTTGAAAGCTGTGTCAGTGTCTGGGACCATT...ACCTCTTTGCAAACAGTTCACGGACATGTTGCTAAGAAGCAGGGAGACAAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| 3UTR-3UTR CCA 90 bp | AGTTGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCGTGGGAGAAAAGGGACCTTaGAATGAATCAATGGAAACC | + |
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Preference number: 2 (lower is better) Translates to: SCHTSTEPATSDREQSAVGEKGP*NESMET Trigger: GGTTTCCATTGATTCATTCCAAGGTCCCTTTTCTCC...CACGGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGTTGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCTCAAATGGCTCTGCCTaGCTGTTTAAAAAGAACCCA | + |
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Preference number: 2 (lower is better) Translates to: RSCHTSTEPATSDREQSASNGSA*LFKKNP Trigger: TGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGA...GGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACAACTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAACTTATATTTCCACTGTGCCAAAGATTCTCGGCCCTCTAAGAAGTTGTCAAATGGTCCCAGACACTaGCACAGCTTTCAACCCCAG | + |
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Preference number: 2 (lower is better) Translates to: TNLYFHCAKDSRPSKKLSNGPRH*HSFQPQ Trigger: CTGGGGTTGAAAGCTGTGTCAGTGTCTGGGACCATT...TGACAACTTCTTAGAGGGCCGAGAATCTTTGGCACAGTGGAAATATAAGTTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAGTTGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCCTTGGAATGAATCAATaGAAACCTGGCTATTTTACA | + |
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Preference number: 2 (lower is better) Translates to: RSCHTSTEPATSDREQSALGMNQ*KPGYFT Trigger: TGTAAAATAGCCAGGTTTCCATTGATTCATTCCAAG...GGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACAACTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGCCGTGACTATTTCTATGAGAGACTATGAGGGAGGGAAGCTTCAGTTACATTCAAATGGCTCTGCCTaGCTGTTTAAAAAGAACCCA | + |
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Preference number: 2 (lower is better) Translates to: SAVTISMRDYEGGKLQLHSNGSA*LFKKNP Trigger: TGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGA...ATGTAACTGAAGCTTCCCTCCCTCATAGTCTCTCATAGAAATAGTCACGGCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| 3UTR-3UTR TCA 90 bp | CAAAGCAGTACATGCCATCAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACACTGGAATTGAGGCCTaGTACAAAAGTAGAGAAATA | + |
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Preference number: 2 (lower is better) Translates to: QSSTCHQMALPGCLKRTHTGIEA*YKSREI Trigger: TATTTCTCTACTTTTGTATCAGGCCTCAATTCCAGT...GTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGATGGCATGTACTGCTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| 3UTR-3UTR CCA 90 bp | CAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACCTAAGTTATCTCACAGACCTTGGAATGAATCAATaGAAACCTGGCTATTTTACA | + |
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Preference number: 2 (lower is better) Translates to: QMALPGCLKRTHLSYLTDLGMNQ*KPGYFT Trigger: TGTAAAATAGCCAGGTTTCCATTGATTCATTCCAAG...GTCTGTGAGATAACTTAGGTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| 3UTR CCA 72 bp | CCGACAAAGCAGTACATGCCATCAAATGGCTCTGCCTaGCTGTTTAAAAAGAACCCACCTAAGTTATCTCAC | + |
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Preference number: 3 (lower is better) Translates to: PTKQYMPSNGSA*LFKKNPPKLSH Trigger: GTGAGATAACTTAGGTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGATGGCATGTACTGCTTTGTCGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| 3UTR-3UTR CAA 90 bp | ATTTCTATGAGAGACTATGAGGGAGGGAAGCTTCAGTTACATGTTGTTAAATCCGCTCCTTTAAGACCCTaGCCTGTCTTCAGCAACACT | + |
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Preference number: 3 (lower is better) Translates to: ISMRDYEGGKLQLHVVKSAPLRP*PVFSNT Trigger: AGTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGC...GGATTTAACAACATGTAACTGAAGCTTCCCTCCCTCATAGTCTCTCATAGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| 3UTR-3UTR CAA 90 bp | ACAAACTTATATTTCCACTGTGCCAAAGATTCTCGGCCCTCTAAGAAGTTGTCAAGCTTCAGTTACATGTaGTTAAATCCCTGTGCATGT | + |
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Preference number: 3 (lower is better) Translates to: TNLYFHCAKDSRPSKKLSSFSYM*LNPCAC Trigger: ACATGCACAGGGATTTAACAACATGTAACTGAAGCT...TGACAACTTCTTAGAGGGCCGAGAATCTTTGGCACAGTGGAAATATAAGTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR CCA 90 bp | TGCCAGAAATCTCAGAAGAATAACCACAACCGCCAGGGGGCTTTGTCTCCCTGCCCTCCTTCAGGTCCATaGGAAGCCGCTCTCGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: CQKSQKNNHNRQGALSPCPPSGP*EAALAP Trigger: CGGAGCGAGAGCGGCTTCCCATGGACCTGAAGGAGG...GCAGGGAGACAAAGCCCCCTGGCGGTTGTGGTTATTCTTCTGAGATTTCTGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR GCA 90 bp | TGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCGTGACTCCCCAGAATCTCCCATaGAGTCTCCCACCTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: CHTSTEPATSDREQSAVTPQNLP*SLPPWP Trigger: TGGCCAAGGTGGGAGACTGCATGGGAGATTCTGGGG...AGTCACGGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR CCA 90 bp | GGAACAGGAATGTGTACAATGGTCCCAGACACTGACACAGCTTTCAACCCCAGCTGGTTTCGCTCACTTTaGCCCCCAGCAAGGCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GTGMCTMVPDTDTAFNPSWFRSL*PPARRS Trigger: GCTCCGCCTTGCTGGGGGCCAAAGTGAGCGAAACCA...GCTGGGGTTGAAAGCTGTGTCAGTGTCTGGGACCATTGTACACATTCCTGTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR TCA 90 bp | TGCCAGAAATCTCAGAAGAATAACCACAACCGCCAGGGGGCTTTGTCTCCCTGCCAGGGTCACTACACCTaGGCCTACAGCTGTACCGAA | + |
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Preference number: 4 (lower is better) Translates to: CQKSQKNNHNRQGALSPCQGHYT*AYSCTE Trigger: TTCGGTACAGCTGTAGGCTCAGGTGTAGTGACCCTG...GCAGGGAGACAAAGCCCCCTGGCGGTTGTGGTTATTCTTCTGAGATTTCTGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR TCA 90 bp | GCTCCTTTAAGACCCTTGCCTGTCTTCAGCAACACTGTGAGCGTTCTCCTAGGACACATCCCACCGAGATaGGGATGGTACCCCACAGAG | + |
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Preference number: 4 (lower is better) Translates to: APLRPLPVFSNTVSVLLGHIPPR*GWYPTE Trigger: CTCTGTGGGGTACCATCCTCATCTCGGTGGGATGTG...TCCTAGGAGAACGCTCACAGTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR CCA 90 bp | ATTACACTTCCTTCCCACGGCTCCTTTAAGACCCTTGCCTGTCTTCAGCAACACTGGTTTCGCTCACTTTaGCCCCCAGCAAGGCGGAGC | + |
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Preference number: 4 (lower is better) Translates to: ITLPSHGSFKTLACLQQHWFRSL*PPARRS Trigger: GCTCCGCCTTGCTGGGGGCCAAAGTGAGCGAAACCA...GTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGCCGTGGGAAGGAAGTGTAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR CCA 90 bp | AGTTGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCGTGTCAAGCCGTTCCGGATaGTTTCGCTCACTTTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: SCHTSTEPATSDREQSAVSSRSG*FRSLWP Trigger: GGGCCAAAGTGAGCGAAACCATCCGGAACGGCTTGA...CACGGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTTGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCCAGGGTCACTACACCTaGGCCTACAGCTGTACCGAA | + |
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Preference number: 4 (lower is better) Translates to: RSCHTSTEPATSDREQSAQGHYT*AYSCTE Trigger: TTCGGTACAGCTGTAGGCTCAGGTGTAGTGACCCTG...GGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACAACTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR TCA 90 bp | GGAACAGGAATGTGTACAATGGTCCCAGACACTGACACAGCTTTCAACCCCAGCGCCACCATGGGCAAATaGCCCAAAGCAGGCTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: GTGMCTMVPDTDTAFNPSATMGK*PKAGCK Trigger: CTTACAGCCTGCTTTGGGTCATTTGCCCATGGTGGC...GCTGGGGTTGAAAGCTGTGTCAGTGTCTGGGACCATTGTACACATTCCTGTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR TCA 90 bp | TGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCGTGACTGTCAACAGCCTTCTTTaGTCGGAGCCAGCCAACAGA | + |
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Preference number: 4 (lower is better) Translates to: CHTSTEPATSDREQSAVTVNSLL*SEPANR Trigger: TCTGTTGGCTGGCTCCGATCAAAGAAGGCTGTTGAC...AGTCACGGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR TCA 90 bp | AGTTGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCGTGGCCATGAGCAGATCTTaGGTTTCGTTGTACAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SCHTSTEPATSDREQSAVAMSRS*VSLYSS Trigger: GGAGCTGTACAACGAAACTCAAGATCTGCTCATGGC...CACGGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTTGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCTTCTTTGGCACGGAATaGATCCAGGGGCATGCCACA | + |
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Preference number: 4 (lower is better) Translates to: RSCHTSTEPATSDREQSAFFGTE*IQGHAT Trigger: TGTGGCATGCCCCTGGATTCATTCCGTGCCAAAGAA...GGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACAACTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR TCA 90 bp | GCTCCTTTAAGACCCTTGCCTGTCTTCAGCAACACTGTGAGCGTTCTCCTAGGAATCTCAGACTCGGAGTaGAGGTCAGACACGGCATTG | + |
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Preference number: 4 (lower is better) Translates to: APLRPLPVFSNTVSVLLGISDSE*RSDTAL Trigger: CAATGCCGTGTCTGACCTTCACTCCGAGTCTGAGAT...TCCTAGGAGAACGCTCACAGTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR GCA 90 bp | AGTTGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCGTGCCGCTTCTTGGTATCTaGATTAGGCCATGTCAGCGT | + |
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Preference number: 4 (lower is better) Translates to: SCHTSTEPATSDREQSAVPLLGI*IRPCQR Trigger: ACGCTGACATGGCCTAATGCAGATACCAAGAAGCGG...CACGGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR CCA 90 bp | CAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACCTAAGTTATCTCACAGACCCTCCTTCAGGTCCATaGGAAGCCGCTCTCGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: QMALPGCLKRTHLSYLTDPPSGP*EAALAP Trigger: CGGAGCGAGAGCGGCTTCCCATGGACCTGAAGGAGG...GTCTGTGAGATAACTTAGGTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR TCA 90 bp | AGAAGTTGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCTCAGTTCAGACCACTTaGCACCCTTCTGCCCATTTG | + |
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Preference number: 4 (lower is better) Translates to: RSCHTSTEPATSDREQSASVQTT*HPSAHL Trigger: CAAATGGGCAGAAGGGTGTCAAGTGGTCTGAACTGA...GGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACAACTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR TCA 90 bp | CAGTACATGCCATCAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACCTAAGCACATCCCACCGAGATaGGGATGGTACCCCACAGAG | + |
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Preference number: 4 (lower is better) Translates to: QYMPSNGSAWLFKKNPPKHIPPR*GWYPTE Trigger: CTCTGTGGGGTACCATCCTCATCTCGGTGGGATGTG...CTTAGGTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGATGGCATGTACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR TCA 90 bp | ATTACACTTCCTTCCCACGGCTCCTTTAAGACCCTTGCCTGTCTTCAGCAACACGTCACCAAGTTTGAATaGCACCGTCCTCTCCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: ITLPSHGSFKTLACLQQHVTKFE*HRPLLH Trigger: GTGGAGGAGAGGACGGTGTCATTCAAACTTGGTGAC...GTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGCCGTGGGAAGGAAGTGTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR TCA 90 bp | GGCTTTGTCTCCCTGCTTCTTAGCAACATGTCCGTGAACTGTTTGCAAAGAGGTGCCACCATGGGCAAATaGCCCAAAGCAGGCTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: GFVSLLLSNMSVNCLQRGATMGK*PKAGCK Trigger: CTTACAGCCTGCTTTGGGTCATTTGCCCATGGTGGC...ACCTCTTTGCAAACAGTTCACGGACATGTTGCTAAGAAGCAGGGAGACAAAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR GCA 90 bp | AGTTGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCGTGGGCTCCCACGGAGAATaGCAAGACAAATGCAATGAT | + |
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Preference number: 4 (lower is better) Translates to: SCHTSTEPATSDREQSAVGSHGE*QDKCND Trigger: ATCATTGCATTTGTCTTGGCATTCTCCGTGGGAGCC...CACGGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR GCA 90 bp | GCTCCTTTAAGACCCTTGCCTGTCTTCAGCAACACTGTGAGCGTTCTCCTAGGAGCTAAGATGCAGGCTTaGTTCAGGGTCACTACACCT | + |
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Preference number: 4 (lower is better) Translates to: APLRPLPVFSNTVSVLLGAKMQA*FRVTTP Trigger: AGGTGTAGTGACCCTGAAGCAAGCCTGCATCTTAGC...TCCTAGGAGAACGCTCACAGTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR GCA 90 bp | AGAAGTTGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCAAGTGTAGCTGTTGTTaGGTCTCAAGGGCTTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: RSCHTSTEPATSDREQSAKCSCC*VSRACP Trigger: GGGACAAGCCCTTGAGACGCAACAACAGCTACACTT...GGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACAACTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR GCA 90 bp | AGTTGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCGTGCTTCAAGAGAGCCACTaGTTCCTTTTCTGTCACCCA | + |
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Preference number: 4 (lower is better) Translates to: SCHTSTEPATSDREQSAVLQESH*FLFCHP Trigger: TGGGTGACAGAAAAGGAAGCAGTGGCTCTCTTGAAG...CACGGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR GCA 90 bp | GCTCCTTTAAGACCCTTGCCTGTCTTCAGCAACACTGTGAGCGTTCTCCTAGGACAGGCTGTAAGGATCTaGAGGAACTGGAAGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: APLRPLPVFSNTVSVLLGQAVRI*RNWKRR Trigger: CCTTCTCTTCCAGTTCCTGCAGATCCTTACAGCCTG...TCCTAGGAGAACGCTCACAGTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR GCA 90 bp | ATTACACTTCCTTCCCACGGCTCCTTTAAGACCCTTGCCTGTCTTCAGCAACACGCTAAGATGCAGGCTTaGTTCAGGGTCACTACACCT | + |
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Preference number: 4 (lower is better) Translates to: ITLPSHGSFKTLACLQQHAKMQA*FRVTTP Trigger: AGGTGTAGTGACCCTGAAGCAAGCCTGCATCTTAGC...GTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGCCGTGGGAAGGAAGTGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR GCA 90 bp | GGAACAGGAATGTGTACAATGGTCCCAGACACTGACACAGCTTTCAACCCCAGCACCCTTCTGCCCATTTaGCACAAGGGAGAAACCAAT | + |
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Preference number: 4 (lower is better) Translates to: GTGMCTMVPDTDTAFNPSTLLPI*HKGETN Trigger: ATTGGTTTCTCCCTTGTGGCAAATGGGCAGAAGGGT...GCTGGGGTTGAAAGCTGTGTCAGTGTCTGGGACCATTGTACACATTCCTGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR GCA 90 bp | GCTCCTTTAAGACCCTTGCCTGTCTTCAGCAACACTGTGAGCGTTCTCCTAGGAACCCTTCTGCCCATTTaGCACAAGGGAGAAACCAAT | + |
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Preference number: 4 (lower is better) Translates to: APLRPLPVFSNTVSVLLGTLLPI*HKGETN Trigger: ATTGGTTTCTCCCTTGTGGCAAATGGGCAGAAGGGT...TCCTAGGAGAACGCTCACAGTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR GCA 90 bp | ATTACACTTCCTTCCCACGGCTCCTTTAAGACCCTTGCCTGTCTTCAGCAACACAAGGGCACAGAAAACTaGACATCCCACCGAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: ITLPSHGSFKTLACLQQHKGTEN*TSHRDE Trigger: CTCATCTCGGTGGGATGTGCAGTTTTCTGTGCCCTT...GTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGCCGTGGGAAGGAAGTGTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR GCA 90 bp | CAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACCTAAGTTATCTCACAGACCCCCAGAATCTCCCATaGAGTCTCCCACCTTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: QMALPGCLKRTHLSYLTDPQNLP*SLPPWP Trigger: TGGCCAAGGTGGGAGACTGCATGGGAGATTCTGGGG...GTCTGTGAGATAACTTAGGTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR GCA 90 bp | ATTACACTTCCTTCCCACGGCTCCTTTAAGACCCTTGCCTGTCTTCAGCAACACCCGCTTCTTGGTATCTaGATTAGGCCATGTCAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: ITLPSHGSFKTLACLQQHPLLGI*IRPCQR Trigger: ACGCTGACATGGCCTAATGCAGATACCAAGAAGCGG...GTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGCCGTGGGAAGGAAGTGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR GCA 90 bp | AGCGTTCTCCTAGGAACAGGAATGTGTACAATGGTCCCAGACACTGACACAGCTAAACCCACAGGCCCATaGAAATGCCAACACCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: SVLLGTGMCTMVPDTDTAKPTGP*KCQHHH Trigger: ATGGTGGTGTTGGCATTTGCATGGGCCTGTGGGTTT...AGCTGTGTCAGTGTCTGGGACCATTGTACACATTCCTGTTCCTAGGAGAACGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CCA 90 bp | GGAACAGGAATGTGTACAATGGTCCCAGACACTGACACAGCTTTCAACCCCAGCAGGATCTGCAGGAACTaGAAGAGAAGGGACACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTGMCTMVPDTDTAFNPSRICRN*KRRDTS Trigger: TGAAGTGTCCCTTCTCTTCCAGTTCCTGCAGATCCT...GCTGGGGTTGAAAGCTGTGTCAGTGTCTGGGACCATTGTACACATTCCTGTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGCAGTACATGCCATCAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACTTCTTTGGCACGGAATaGATCCAGGGGCATGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QSSTCHQMALPGCLKRTHFFGTE*IQGHAT Trigger: TGTGGCATGCCCCTGGATTCATTCCGTGCCAAAGAA...GTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGATGGCATGTACTGCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR GCA 90 bp | GCTCCTTTAAGACCCTTGCCTGTCTTCAGCAACACTGTGAGCGTTCTCCTAGGAGGAGAAACCAATGGTTaGACCGACAATACAATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: APLRPLPVFSNTVSVLLGGETNG*TDNTMG Trigger: ACCCATTGTATTGTCGGTGCAACCATTGGTTTCTCC...TCCTAGGAGAACGCTCACAGTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGCAGTACATGCCATCAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACCACTTGACACCCTTCTaGCCATTTGCCACAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSSTCHQMALPGCLKRTHHLTPF*PFATRE Trigger: CTCCCTTGTGGCAAATGGGCAGAAGGGTGTCAAGTG...GTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGATGGCATGTACTGCTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR GCA 90 bp | AGCGTTCTCCTAGGAACAGGAATGTGTACAATGGTCCCAGACACTGACACAGCTCTTCAAGAGAGCCACTaGTTCCTTTTCTGTCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVLLGTGMCTMVPDTDTALQESH*FLFCHP Trigger: TGGGTGACAGAAAAGGAAGCAGTGGCTCTCTTGAAG...AGCTGTGTCAGTGTCTGGGACCATTGTACACATTCCTGTTCCTAGGAGAACGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTGTCTCCCTGCTTCTTAGCAACATGTCCGTGAACTGTTTGCAAAGAGGTAAACCCACAGGCCCATaGAAATGCCAACACCACCAT | + |
|
Preference number: 4 (lower is better) Translates to: GFVSLLLSNMSVNCLQRGKPTGP*KCQHHH Trigger: ATGGTGGTGTTGGCATTTGCATGGGCCTGTGGGTTT...ACCTCTTTGCAAACAGTTCACGGACATGTTGCTAAGAAGCAGGGAGACAAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CCA 90 bp | GGAACAGGAATGTGTACAATGGTCCCAGACACTGACACAGCTTTCAACCCCAGCAATTTGCTACATCATTaGCTCCCACGGAGAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTGMCTMVPDTDTAFNPSNLLHH*LPRRMP Trigger: TGGCATTCTCCGTGGGAGCCAATGATGTAGCAAATT...GCTGGGGTTGAAAGCTGTGTCAGTGTCTGGGACCATTGTACACATTCCTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CCA 90 bp | AGAAGTTGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCAATTTGCTACATCATTaGCTCCCACGGAGAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RSCHTSTEPATSDREQSANLLHH*LPRRMP Trigger: TGGCATTCTCCGTGGGAGCCAATGATGTAGCAAATT...GGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACAACTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CCA 90 bp | TGCCAGAAATCTCAGAAGAATAACCACAACCGCCAGGGGGCTTTGTCTCCCTGCCAAGGGAGAAACCAATaGTTGCACCGACAATACAAT | + |
|
Preference number: 4 (lower is better) Translates to: CQKSQKNNHNRQGALSPCQGRNQ*LHRQYN Trigger: ATTGTATTGTCGGTGCAACCATTGGTTTCTCCCTTG...GCAGGGAGACAAAGCCCCCTGGCGGTTGTGGTTATTCTTCTGAGATTTCTGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CCA 90 bp | AGCGTTCTCCTAGGAACAGGAATGTGTACAATGGTCCCAGACACTGACACAGCTAGGATCTGCAGGAACTaGAAGAGAAGGGACACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVLLGTGMCTMVPDTDTARICRN*KRRDTS Trigger: TGAAGTGTCCCTTCTCTTCCAGTTCCTGCAGATCCT...AGCTGTGTCAGTGTCTGGGACCATTGTACACATTCCTGTTCCTAGGAGAACGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| 3UTR CAA 72 bp | AAATTACACTTCCTTCCCACGGCTCCTTTAAGACCCTaGCCTGTCTTCAGCAACACTGTGAGCGTTCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: KLHFLPTAPLRP*PVFSNTVSVLL Trigger: TAGGAGAACGCTCACAGTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGCCGTGGGAAGGAAGTGTAATTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR TCA 90 bp | CAAAGCAGTACATGCCATCAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACGCCATGAGCAGATCTTaGGTTTCGTTGTACAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QSSTCHQMALPGCLKRTHAMSRS*VSLYSS Trigger: GGAGCTGTACAACGAAACTCAAGATCTGCTCATGGC...GTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGATGGCATGTACTGCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR TCA 90 bp | GACTATGAGGGAGGGAAGCTTCAGTTACATGTTGTTAAATCCCTGTGCATGTTGGTCACCAAGTTTGAATaGCACCGTCCTCTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DYEGGKLQLHVVKSLCMLVTKFE*HRPLLH Trigger: GTGGAGGAGAGGACGGTGTCATTCAAACTTGGTGAC...CAACATGCACAGGGATTTAACAACATGTAACTGAAGCTTCCCTCCCTCATAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR TCA 90 bp | CAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACCTAAGTTATCTCACAGACATCTCAGACTCGGAGTaGAGGTCAGACACGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: QMALPGCLKRTHLSYLTDISDSE*RSDTAL Trigger: CAATGCCGTGTCTGACCTTCACTCCGAGTCTGAGAT...GTCTGTGAGATAACTTAGGTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR GCA 90 bp | ATTACACTTCCTTCCCACGGCTCCTTTAAGACCCTTGCCTGTCTTCAGCAACACTGTACCGAACGAATTTaGTACATCATTGGCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ITLPSHGSFKTLACLQQHCTERI*YIIGSH Trigger: GTGGGAGCCAATGATGTAGCAAATTCGTTCGGTACA...GTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGCCGTGGGAAGGAAGTGTAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR GCA 90 bp | CAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACCTAAGTTATCTCACAGACCACTTGACACCCTTCTaGCCATTTGCCACAAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QMALPGCLKRTHLSYLTDHLTPF*PFATRE Trigger: CTCCCTTGTGGCAAATGGGCAGAAGGGTGTCAAGTG...GTCTGTGAGATAACTTAGGTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGCAGTACATGCCATCAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACAAGGGCACAGAAAACTaGACATCCCACCGAGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSSTCHQMALPGCLKRTHKGTEN*TSHRDE Trigger: CTCATCTCGGTGGGATGTGCAGTTTTCTGTGCCCTT...GTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGATGGCATGTACTGCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR GCA 90 bp | CAAAGCAGTACATGCCATCAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACCAGGCTGTAAGGATCTaGAGGAACTGGAAGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSSTCHQMALPGCLKRTHQAVRI*RNWKRR Trigger: CCTTCTCTTCCAGTTCCTGCAGATCCTTACAGCCTG...GTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGATGGCATGTACTGCTTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTTGTCTCCCTGCTTCTTAGCAACATGTCCGTGAACTGTTTGCAAAGAGGTGGAGAAACCAATGGTTaGACCGACAATACAATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GFVSLLLSNMSVNCLQRGGETNG*TDNTMG Trigger: ACCCATTGTATTGTCGGTGCAACCATTGGTTTCTCC...ACCTCTTTGCAAACAGTTCACGGACATGTTGCTAAGAAGCAGGGAGACAAAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR GCA 90 bp | CAGTACATGCCATCAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACCTAAGTTCCCATTAGGCAACTaGACTGCACCATTGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QYMPSNGSAWLFKKNPPKFPLGN*TAPLMV Trigger: CACCATCAATGGTGCAGTGCAGTTGCCTAATGGGAA...CTTAGGTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGATGGCATGTACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CCA 90 bp | CAGTACATGCCATCAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACCTAAGTGCAGTCTCCCACCTTaGCCAGATGTAACTTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: QYMPSNGSAWLFKKNPPKCSLPP*PDVTYG Trigger: TCCATAAGTTACATCTGGCCAAGGTGGGAGACTGCA...CTTAGGTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGATGGCATGTACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTGTCTCCCTGCTTCTTAGCAACATGTCCGTGAACTGTTTGCAAAGAGGTTTTGTTCACCTTCTTTaGCACGGAATGAATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GFVSLLLSNMSVNCLQRGFVHLL*HGMNPG Trigger: CCCTGGATTCATTCCGTGCCAAAGAAGGTGAACAAA...ACCTCTTTGCAAACAGTTCACGGACATGTTGCTAAGAAGCAGGGAGACAAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR TCA 90 bp | ACAAACTTATATTTCCACTGTGCCAAAGATTCTCGGCCCTCTAAGAAGTTGTCAGTCAACAGCCTTCTTTaGTCGGAGCCAGCCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: TNLYFHCAKDSRPSKKLSVNSLL*SEPANR Trigger: TCTGTTGGCTGGCTCCGATCAAAGAAGGCTGTTGAC...TGACAACTTCTTAGAGGGCCGAGAATCTTTGGCACAGTGGAAATATAAGTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR GCA 90 bp | AGTGCCGTGACTATTTCTATGAGAGACTATGAGGGAGGGAAGCTTCAGTTACATGGCTCCCACGGAGAATaGCAAGACAAATGCAATGAT | + |
|
Preference number: 4 (lower is better) Translates to: SAVTISMRDYEGGKLQLHGSHGE*QDKCND Trigger: ATCATTGCATTTGTCTTGGCATTCTCCGTGGGAGCC...ATGTAACTGAAGCTTCCCTCCCTCATAGTCTCTCATAGAAATAGTCACGGCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR GCA 90 bp | ACAAACTTATATTTCCACTGTGCCAAAGATTCTCGGCCCTCTAAGAAGTTGTCAAACGAAGCCACGAGCTaGCACACAGCAGAACCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TNLYFHCAKDSRPSKKLSNEATS*HTAEPN Trigger: GTTTGGTTCTGCTGTGTGGCAGCTCGTGGCTTCGTT...TGACAACTTCTTAGAGGGCCGAGAATCTTTGGCACAGTGGAAATATAAGTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR GCA 90 bp | GACTATGAGGGAGGGAAGCTTCAGTTACATGTTGTTAAATCCCTGTGCATGTTGTTCCCATTAGGCAACTaGACTGCACCATTGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DYEGGKLQLHVVKSLCMLFPLGN*TAPLMV Trigger: CACCATCAATGGTGCAGTGCAGTTGCCTAATGGGAA...CAACATGCACAGGGATTTAACAACATGTAACTGAAGCTTCCCTCCCTCATAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CCA 90 bp | CAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACCTAAGTTATCTCACAGACTGCAGTCTCCCACCTTaGCCAGATGTAACTTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: QMALPGCLKRTHLSYLTDCSLPP*PDVTYG Trigger: TCCATAAGTTACATCTGGCCAAGGTGGGAGACTGCA...GTCTGTGAGATAACTTAGGTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS-3UTR GCA 90 bp | ATTTCTATGAGAGACTATGAGGGAGGGAAGCTTCAGTTACATGTTGTTAAATCCAACGAAGCCACGAGCTaGCACACAGCAGAACCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISMRDYEGGKLQLHVVKSNEATS*HTAEPN Trigger: GTTTGGTTCTGCTGTGTGGCAGCTCGTGGCTTCGTT...GGATTTAACAACATGTAACTGAAGCTTCCCTCCCTCATAGTCTCTCATAGAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CCA 90 bp | CAGTACATGCCATCAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACCTAAGCAAGGGAGAAACCAATaGTTGCACCGACAATACAAT | + |
|
Preference number: 4 (lower is better) Translates to: QYMPSNGSAWLFKKNPPKQGRNQ*LHRQYN Trigger: ATTGTATTGTCGGTGCAACCATTGGTTTCTCCCTTG...CTTAGGTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGATGGCATGTACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTTGTCTCCCTGCTTCTTAGCAACATGTCCGTGAACTGTTTGCAAAGAGGTTTTTTCTCTTCATCCTaGGACATACAAAGAACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GFVSLLLSNMSVNCLQRGFFSSS*DIQRTR Trigger: TCTGGTTCTTTGTATGTCCCAGGATGAAGAGAAAAA...ACCTCTTTGCAAACAGTTCACGGACATGTTGCTAAGAAGCAGGGAGACAAAGCC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CCA 90 bp | GACTATGAGGGAGGGAAGCTTCAGTTACATGTTGTTAAATCCCTGTGCATGTTGTTTTTCTCTTCATCCTaGGACATACAAAGAACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: DYEGGKLQLHVVKSLCMLFFSSS*DIQRTR Trigger: TCTGGTTCTTTGTATGTCCCAGGATGAAGAGAAAAA...CAACATGCACAGGGATTTAACAACATGTAACTGAAGCTTCCCTCCCTCATAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS TCA 90 bp | AAGCCGCTCTCGCTCCGGAGCCTCCTCCAGGTCACCAAGTTTGAATaGCACCGTCCTCTCCTCCACCACAGCCCGGAGTGGCCCAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KPLSLRSLLQVTKFE*HRPLLHHSPEWPSG Trigger: GCCACTGGGCCACTCCGGGCTGTGGTGGAGGAGAGGACGGTGTCATTCAAACTTGGTGACCTGGAGGAGGCTCCGGAGCGAGAGCGGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS TCA 90 bp | TGGGAAGCCGCTCTCGCTCCGGAGCCTCCTCCAGGTCACCAAGTTTaGATGACACCGTCCTCTCCTCCACCACAGCCCGGAGTGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WEAALAPEPPPGHQV*MTPSSPPPQPGVAQ Trigger: CTGGGCCACTCCGGGCTGTGGTGGAGGAGAGGACGGTGTCATTCAAACTTGGTGACCTGGAGGAGGCTCCGGAGCGAGAGCGGCTTCCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | TGCCAGAAATCTCAGAAGAATAACCACAACCGCCAGGGGGCTTTGTCTCCCTGCAGAGGGCCGATGGCATaGCTGACGTCATTGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: CQKSQKNNHNRQGALSPCRGPMA*LTSLPP Trigger: TGGTGGCAATGACGTCAGCAATGCCATCGGCCCTCT...GCAGGGAGACAAAGCCCCCTGGCGGTTGTGGTTATTCTTCTGAGATTTCTGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS GCA 90 bp | AAGGCGGAGCCCACAGTTTCGAAGATGCTAGCTAAGATGCAGGCTTaGTTCAGGGTCACTACACCTGAGCCTACAGCTGTACCGAACGAA | + |
|
Preference number: 5 (lower is better) Translates to: KAEPTVSKMLAKMQA*FRVTTPEPTAVPNE Trigger: TTCGTTCGGTACAGCTGTAGGCTCAGGTGTAGTGACCCTGAAGCAAGCCTGCATCTTAGCTAGCATCTTCGAAACTGTGGGCTCCGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | AGTTGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCGTGCACCCTTCTGCCCATTaGCCACAAGGGAGAAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: SCHTSTEPATSDREQSAVHPSAH*PQGRNQ Trigger: TTGGTTTCTCCCTTGTGGCAAATGGGCAGAAGGGTG...CACGGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACAACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | CCCTTGCCTGTCTTCAGCAACACTGTGAGCGTTCTCCTAGGAACAGGAATGTGTTTGCGTCTCAAGGGCTaGTCCCCAGAATCTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: PLPVFSNTVSVLLGTGMCLRLKG*SPESPM Trigger: CATGGGAGATTCTGGGGACAAGCCCTTGAGACGCAA...ACACATTCCTGTTCCTAGGAGAACGCTCACAGTGTTGCTGAAGACAGGCAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | AGCGTTCTCCTAGGAACAGGAATGTGTACAATGGTCCCAGACACTGACACAGCTCCCCACAGAGGAAGTTaGTCAAAGCCCAGCAACGGT | + |
|
Preference number: 5 (lower is better) Translates to: SVLLGTGMCTMVPDTDTAPHRGS*SKPSNG Trigger: ACCGTTGCTGGGCTTTGACAAACTTCCTCTGTGGGG...AGCTGTGTCAGTGTCTGGGACCATTGTACACATTCCTGTTCCTAGGAGAACGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS TCA 90 bp | GCAGAACCAAACATAGCACTGACGGAGCCAGCCATGAGCAGATCTTaGGTTTCGTTGTACAGCTCCACATCTATCAAGCCGTTCCGGATG | + |
|
Preference number: 5 (lower is better) Translates to: AEPNIALTEPAMSRS*VSLYSSTSIKPFRM Trigger: CATCCGGAACGGCTTGATAGATGTGGAGCTGTACAACGAAACTCAAGATCTGCTCATGGCTGGCTCCGTCAGTGCTATGTTTGGTTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | AGAAGTTGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCGAATTTGCTACATCATaGGCTCCCACGGAGAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSCHTSTEPATSDREQSAEFATS*APTENA Trigger: GGCATTCTCCGTGGGAGCCAATGATGTAGCAAATTC...GGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACAACTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | CAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACCTAAGTTATCTCACAGACATGGTTTCGCTCACTTaGGCCCCCAGCAAGGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QMALPGCLKRTHLSYLTDMVSLT*APSKAE Trigger: CTCCGCCTTGCTGGGGGCCAAAGTGAGCGAAACCAT...GTCTGTGAGATAACTTAGGTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS GCA 90 bp | CATCCTGGGACATACAAAGAACCAGACGATAAGGGCACAGAAAACTaGACATCCCACCGAGATGAGGATGGTACCCCACAGAGGAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: HPGTYKEPDDKGTEN*TSHRDEDGTPQRKF Trigger: AAACTTCCTCTGTGGGGTACCATCCTCATCTCGGTGGGATGTGCAGTTTTCTGTGCCCTTATCGTCTGGTTCTTTGTATGTCCCAGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS CCA 90 bp | CCATTTGCCACAAGGGAGAAACCAATGGTTGCACCGACAATACAATaGGTCCCAGAAATCGGAAGCTTCAAAAACGAAGCCACGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PFATREKPMVAPTIQ*VPEIGSFKNEATSC Trigger: GCAGCTCGTGGCTTCGTTTTTGAAGCTTCCGATTTCTGGGACCCATTGTATTGTCGGTGCAACCATTGGTTTCTCCCTTGTGGCAAATGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | GCTCCTTTAAGACCCTTGCCTGTCTTCAGCAACACTGTGAGCGTTCTCCTAGGAAGCCATGAGCAGATCTaGAGTTTCGTTGTACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: APLRPLPVFSNTVSVLLGSHEQI*SFVVQL Trigger: GAGCTGTACAACGAAACTCAAGATCTGCTCATGGCT...TCCTAGGAGAACGCTCACAGTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | ATTACACTTCCTTCCCACGGCTCCTTTAAGACCCTTGCCTGTCTTCAGCAACACGGGAGAAACCAATGGTaGCACCGACAATACAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: ITLPSHGSFKTLACLQQHGRNQW*HRQYNG Trigger: CCCATTGTATTGTCGGTGCAACCATTGGTTTCTCCC...GTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGCCGTGGGAAGGAAGTGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | CAGTACATGCCATCAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACCTAAGCCCCACAGAGGAAGTTaGTCAAAGCCCAGCAACGGT | + |
|
Preference number: 5 (lower is better) Translates to: QYMPSNGSAWLFKKNPPKPHRGS*SKPSNG Trigger: ACCGTTGCTGGGCTTTGACAAACTTCCTCTGTGGGG...CTTAGGTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGATGGCATGTACTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | TGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCGTGACTCTCCAGGAGCCATCTTaGTTTCTTCATGGTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CHTSTEPATSDREQSAVTLQEPS*FLHGLL Trigger: AAGAAGACCATGAAGAAACAAAGATGGCTCCTGGAG...AGTCACGGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGCAGTACATGCCATCAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACTTGCGTCTCAAGGGCTaGTCCCCAGAATCTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: QSSTCHQMALPGCLKRTHLRLKG*SPESPM Trigger: CATGGGAGATTCTGGGGACAAGCCCTTGAGACGCAA...GTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGATGGCATGTACTGCTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | AGTGCCGTGACTATTTCTATGAGAGACTATGAGGGAGGGAAGCTTCAGTTACATAGAGGGCCGATGGCATaGCTGACGTCATTGCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: SAVTISMRDYEGGKLQLHRGPMA*LTSLPP Trigger: TGGTGGCAATGACGTCAGCAATGCCATCGGCCCTCT...ATGTAACTGAAGCTTCCCTCCCTCATAGTCTCTCATAGAAATAGTCACGGCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS TCA 90 bp | GGCCATAAAAATGTTTCGAAACAGTCGCCAGTCAACAGCCTTCTTTaGTCGGAGCCAGCCAACAGACACAACAGAGCCCACTTTGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: GHKNVSKQSPVNSLL*SEPANRHNRAHFAM Trigger: CATTGCAAAGTGGGCTCTGTTGTGTCTGTTGGCTGGCTCCGATCAAAGAAGGCTGTTGACTGGCGACTGTTTCGAAACATTTTTATGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | ATTACACTTCCTTCCCACGGCTCCTTTAAGACCCTTGCCTGTCTTCAGCAACACATCAGTTCAGACCACTaGACACCCTTCTGCCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: ITLPSHGSFKTLACLQQHISSDH*TPFCPF Trigger: AAATGGGCAGAAGGGTGTCAAGTGGTCTGAACTGAT...GTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGCCGTGGGAAGGAAGTGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | TGTCACACATCAACAGAACCTGCCACTAGTGACAGGGAGCAGAGTGCCGTGACTATAATGGAAAAGAGGTaGATTCCGATTGTGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: CHTSTEPATSDREQSAVTIMEKR*IPIVQA Trigger: TGCCTGCACAATCGGAATCAACCTCTTTTCCATTAT...AGTCACGGCACTCTGCTCCCTGTCACTAGTGGCAGGTTCTGTTGATGTGTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | GCTCCTTTAAGACCCTTGCCTGTCTTCAGCAACACTGTGAGCGTTCTCCTAGGACTGGTTGCTGACAGTTaGACTGAACTGAACAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: APLRPLPVFSNTVSVLLGLVADS*TELNKV Trigger: AACCTTGTTCAGTTCAGTCAAACTGTCAGCAACCAG...TCCTAGGAGAACGCTCACAGTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | GGAACAGGAATGTGTACAATGGTCCCAGACACTGACACAGCTTTCAACCCCAGCCTGGTTGCTGACAGTTaGACTGAACTGAACAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GTGMCTMVPDTDTAFNPSLVADS*TELNKV Trigger: AACCTTGTTCAGTTCAGTCAAACTGTCAGCAACCAG...GCTGGGGTTGAAAGCTGTGTCAGTGTCTGGGACCATTGTACACATTCCTGTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | ATTACACTTCCTTCCCACGGCTCCTTTAAGACCCTTGCCTGTCTTCAGCAACACACAACAGAGCCCACTTaGCAATGTGTTGTGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: ITLPSHGSFKTLACLQQHTTEPT*QCVVLM Trigger: CATCAGCACAACACATTGCAAAGTGGGCTCTGTTGT...GTGTTGCTGAAGACAGGCAAGGGTCTTAAAGGAGCCGTGGGAAGGAAGTGTAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | CAGTACATGCCATCAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACCTAAGAGTCAACAGCCTTCTTaGATCGGAGCCAGCCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: QYMPSNGSAWLFKKNPPKSQQPS*IGASQQ Trigger: CTGTTGGCTGGCTCCGATCAAAGAAGGCTGTTGACT...CTTAGGTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGATGGCATGTACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS GCA 90 bp | CTTGACACCCTTCTGCCCATTTGCCACAAGGGAGAAACCAATGGTTaGACCGACAATACAATGGGTCCCAGAAATCGGAAGCTTCAAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LDTLLPICHKGETNG*TDNTMGPRNRKLQK Trigger: TTTTTGAAGCTTCCGATTTCTGGGACCCATTGTATTGTCGGTGCAACCATTGGTTTCTCCCTTGTGGCAAATGGGCAGAAGGGTGTCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | GGAACAGGAATGTGTACAATGGTCCCAGACACTGACACAGCTTTCAACCCCAGCATAATGGAAAAGAGGTaGATTCCGATTGTGCAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GTGMCTMVPDTDTAFNPSIMEKR*IPIVQA Trigger: TGCCTGCACAATCGGAATCAACCTCTTTTCCATTAT...GCTGGGGTTGAAAGCTGTGTCAGTGTCTGGGACCATTGTACACATTCCTGTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | GACTATGAGGGAGGGAAGCTTCAGTTACATGTTGTTAAATCCCTGTGCATGTTGAGTCAACAGCCTTCTTaGATCGGAGCCAGCCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: DYEGGKLQLHVVKSLCMLSQQPS*IGASQQ Trigger: CTGTTGGCTGGCTCCGATCAAAGAAGGCTGTTGACT...CAACATGCACAGGGATTTAACAACATGTAACTGAAGCTTCCCTCCCTCATAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS TCA 90 bp | GAGAGACGAACCACGACATCACAATTTTTATCAGTTCAGACCACTTaGCACCCTTCTGCCCATTTGCCACAAGGGAGAAACCAATGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ERRTTTSQFLSVQTT*HPSAHLPQGRNQWL Trigger: CAACCATTGGTTTCTCCCTTGTGGCAAATGGGCAGAAGGGTGTCAAGTGGTCTGAACTGATAAAAATTGTGATGTCGTGGTTCGTCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | CAGTACATGCCATCAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACCTAAGCTGTACCGAACGAATTaGCTACATCATTGGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QYMPSNGSAWLFKKNPPKLYRTN*LHHWLP Trigger: TGGGAGCCAATGATGTAGCAAATTCGTTCGGTACAG...CTTAGGTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGATGGCATGTACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | CAAAGCAGTACATGCCATCAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACACAACAGAGCCCACTTaGCAATGTGTTGTGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: QSSTCHQMALPGCLKRTHTTEPT*QCVVLM Trigger: CATCAGCACAACACATTGCAAAGTGGGCTCTGTTGT...GTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTGATGGCATGTACTGCTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS GCA 90 bp | CACAATTTTTATCAGTTCAGACCACTTGACACCCTTCTGCCCATTTaGCACAAGGGAGAAACCAATGGTTGCACCGACAATACAATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HNFYQFRPLDTLLPI*HKGETNGCTDNTMG Trigger: ACCCATTGTATTGTCGGTGCAACCATTGGTTTCTCCCTTGTGGCAAATGGGCAGAAGGGTGTCAAGTGGTCTGAACTGATAAAAATTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS GCA 90 bp | CACGACATCACAATTTTTATCAGTTCAGACCACTTGACACCCTTCTaGCCATTTGCCACAAGGGAGAAACCAATGGTTGCACCGACAATA | + |
|
Preference number: 5 (lower is better) Translates to: HDITIFISSDHLTPF*PFATREKPMVAPTI Trigger: TATTGTCGGTGCAACCATTGGTTTCTCCCTTGTGGCAAATGGGCAGAAGGGTGTCAAGTGGTCTGAACTGATAAAAATTGTGATGTCGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | GACTATGAGGGAGGGAAGCTTCAGTTACATGTTGTTAAATCCCTGTGCATGTTGCTGTACCGAACGAATTaGCTACATCATTGGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: DYEGGKLQLHVVKSLCMLLYRTN*LHHWLP Trigger: TGGGAGCCAATGATGTAGCAAATTCGTTCGGTACAG...CAACATGCACAGGGATTTAACAACATGTAACTGAAGCTTCCCTCCCTCATAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | AGTGCCGTGACTATTTCTATGAGAGACTATGAGGGAGGGAAGCTTCAGTTACATAGCCATGAGCAGATCTaGAGTTTCGTTGTACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SAVTISMRDYEGGKLQLHSHEQI*SFVVQL Trigger: GAGCTGTACAACGAAACTCAAGATCTGCTCATGGCT...ATGTAACTGAAGCTTCCCTCCCTCATAGTCTCTCATAGAAATAGTCACGGCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | ACAAACTTATATTTCCACTGTGCCAAAGATTCTCGGCCCTCTAAGAAGTTGTCACACCCTTCTGCCCATTaGCCACAAGGGAGAAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: TNLYFHCAKDSRPSKKLSHPSAH*PQGRNQ Trigger: TTGGTTTCTCCCTTGTGGCAAATGGGCAGAAGGGTG...TGACAACTTCTTAGAGGGCCGAGAATCTTTGGCACAGTGGAAATATAAGTTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | ACAAACTTATATTTCCACTGTGCCAAAGATTCTCGGCCCTCTAAGAAGTTGTCAGAATTTGCTACATCATaGGCTCCCACGGAGAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: TNLYFHCAKDSRPSKKLSEFATS*APTENA Trigger: GGCATTCTCCGTGGGAGCCAATGATGTAGCAAATTC...TGACAACTTCTTAGAGGGCCGAGAATCTTTGGCACAGTGGAAATATAAGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | ACAAACTTATATTTCCACTGTGCCAAAGATTCTCGGCCCTCTAAGAAGTTGTCAGGGAGAAACCAATGGTaGCACCGACAATACAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: TNLYFHCAKDSRPSKKLSGRNQW*HRQYNG Trigger: CCCATTGTATTGTCGGTGCAACCATTGGTTTCTCCC...TGACAACTTCTTAGAGGGCCGAGAATCTTTGGCACAGTGGAAATATAAGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | GACTATGAGGGAGGGAAGCTTCAGTTACATGTTGTTAAATCCCTGTGCATGTTGCTCCAGGAGCCATCTTaGTTTCTTCATGGTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DYEGGKLQLHVVKSLCMLLQEPS*FLHGLL Trigger: AAGAAGACCATGAAGAAACAAAGATGGCTCCTGGAG...CAACATGCACAGGGATTTAACAACATGTAACTGAAGCTTCCCTCCCTCATAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | CAAATGGCTCTGCCTGGCTGTTTAAAAAGAACCCACCTAAGTTATCTCACAGACTTTTGTTCACCTTCTTaGGCACGGAATGAATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QMALPGCLKRTHLSYLTDFCSPS*ARNESR Trigger: CCTGGATTCATTCCGTGCCAAAGAAGGTGAACAAAA...GTCTGTGAGATAACTTAGGTGGGTTCTTTTTAAACAGCCAGGCAGAGCCATTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | GACTATGAGGGAGGGAAGCTTCAGTTACATGTTGTTAAATCCCTGTGCATGTTGTTTTGTTCACCTTCTTaGGCACGGAATGAATCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DYEGGKLQLHVVKSLCMLFCSPS*ARNESR Trigger: CCTGGATTCATTCCGTGCCAAAGAAGGTGAACAAAA...CAACATGCACAGGGATTTAACAACATGTAACTGAAGCTTCCCTCCCTCATAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | ATTTCTATGAGAGACTATGAGGGAGGGAAGCTTCAGTTACATGTTGTTAAATCCATCAGTTCAGACCACTaGACACCCTTCTGCCCATTT | + |
|
Preference number: 5 (lower is better) Translates to: ISMRDYEGGKLQLHVVKSISSDH*TPFCPF Trigger: AAATGGGCAGAAGGGTGTCAAGTGGTCTGAACTGAT...GGATTTAACAACATGTAACTGAAGCTTCCCTCCCTCATAGTCTCTCATAGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS-3UTR CAA 90 bp | ACAAACTTATATTTCCACTGTGCCAAAGATTCTCGGCCCTCTAAGAAGTTGTCAATTCGAATCCGCTTCTaGGTATCTGCATTAGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: TNLYFHCAKDSRPSKKLSIRIRF*VSALGH Trigger: ATGGCCTAATGCAGATACCAAGAAGCGGATTCGAAT...TGACAACTTCTTAGAGGGCCGAGAATCTTTGGCACAGTGGAAATATAAGTTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS CCA 90 bp | GGATTCCTATGCTCAACGTCTCCAGGAGCCATCTTTGTTTCTTCATaGTCTTCTTTTAAGTTGCTCTTCTTTTCCATTAAGGGACTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GFLCSTSPGAIFVSS*SSFKLLFFSIKGLS Trigger: TGAAAGTCCCTTAATGGAAAAGAAGAGCAACTTAAAAGAAGACCATGAAGAAACAAAGATGGCTCCTGGAGACGTTGAGCATAGGAATCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS CAA 72 bp | CGCTCTCGCTCCGGAGCCTCCTCCAGGTCACCAAGTTaGAATGACACCGTCCTCTCCTCCACCACAGCCCGG | + |
|
Preference number: 6 (lower is better) Translates to: RSRSGASSRSPS*NDTVLSSTTAR Trigger: CCGGGCTGTGGTGGAGGAGAGGACGGTGTCATTCAAACTTGGTGACCTGGAGGAGGCTCCGGAGCGAGAGCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS CAA 90 bp | ATGGGAAGCCGCTCTCGCTCCGGAGCCTCCTCCAGGTCACCAAGTTaGAATGACACCGTCCTCTCCTCCACCACAGCCCGGAGTGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: MGSRSRSGASSRSPS*NDTVLSSTTARSGP Trigger: TGGGCCACTCCGGGCTGTGGTGGAGGAGAGGACGGTGTCATTCAAACTTGGTGACCTGGAGGAGGCTCCGGAGCGAGAGCGGCTTCCCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS TCA 72 bp | TCGCTCCGGAGCCTCCTCCAGGTCACCAAGTTTGAATaGCACCGTCCTCTCCTCCACCACAGCCCGGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLRSLLQVTKFE*HRPLLHHSPEW Trigger: CCACTCCGGGCTGTGGTGGAGGAGAGGACGGTGTCATTCAAACTTGGTGACCTGGAGGAGGCTCCGGAGCGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS TCA 72 bp | GCTCTCGCTCCGGAGCCTCCTCCAGGTCACCAAGTTTaGATGACACCGTCCTCTCCTCCACCACAGCCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: ALAPEPPPGHQV*MTPSSPPPQPG Trigger: TCCGGGCTGTGGTGGAGGAGAGGACGGTGTCATTCAAACTTGGTGACCTGGAGGAGGCTCCGGAGCGAGAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS CCA 72 bp | CCGTCCTCTCCTCCACCACAGCCCGGAGTGGCCCAGTaGCACACACTACCTCAGACACAGGATTCCTATGCT | + |
|
Preference number: 6 (lower is better) Translates to: PSSPPPQPGVAQ*HTLPQTQDSYA Trigger: AGCATAGGAATCCTGTGTCTGAGGTAGTGTGTGCCACTGGGCCACTCCGGGCTGTGGTGGAGGAGAGGACGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS CCA 72 bp | CGTTGTACAGCTCCACATCTATCAAGCCGTTCCGGATaGTTTCGCTCACTTTGGCCCCCAGCAAGGCGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RCTAPHLSSRSG*FRSLWPPARRS Trigger: GCTCCGCCTTGCTGGGGGCCAAAGTGAGCGAAACCATCCGGAACGGCTTGATAGATGTGGAGCTGTACAACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS CCA 72 bp | CATCTATCAAGCCGTTCCGGATGGTTTCGCTCACTTTaGCCCCCAGCAAGGCGGAGCCCACAGTTTCGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: HLSSRSGWFRSL*PPARRSPQFRR Trigger: TCTTCGAAACTGTGGGCTCCGCCTTGCTGGGGGCCAAAGTGAGCGAAACCATCCGGAACGGCTTGATAGATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS CAA 72 bp | ACATCTATCAAGCCGTTCCGGATGGTTTCGCTCACTTaGGCCCCCAGCAAGGCGGAGCCCACAGTTTCGAAG | + |
|
Preference number: 6 (lower is better) Translates to: TSIKPFRMVSLT*APSKAEPTVSK Trigger: CTTCGAAACTGTGGGCTCCGCCTTGCTGGGGGCCAAAGTGAGCGAAACCATCCGGAACGGCTTGATAGATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS CAA 90 bp | TACAGCTCCACATCTATCAAGCCGTTCCGGATGGTTTCGCTCACTTaGGCCCCCAGCAAGGCGGAGCCCACAGTTTCGAAGATGCTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: YSSTSIKPFRMVSLT*APSKAEPTVSKMLA Trigger: AGCTAGCATCTTCGAAACTGTGGGCTCCGCCTTGCTGGGGGCCAAAGTGAGCGAAACCATCCGGAACGGCTTGATAGATGTGGAGCTGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS TCA 72 bp | AATGTTTCGAAACAGTCGCCAGTCAACAGCCTTCTTTaGTCGGAGCCAGCCAACAGACACAACAGAGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: NVSKQSPVNSLL*SEPANRHNRAH Trigger: GTGGGCTCTGTTGTGTCTGTTGGCTGGCTCCGATCAAAGAAGGCTGTTGACTGGCGACTGTTTCGAAACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
||
| CDS GCA 72 bp | CCCACAGTTTCGAAGATGCTAGCTAAGATGCAGGCTTaGTTCAGGGTCACTACACCTGAGCCTACAGCTGTA | + |
|
Preference number: 6 (lower is better) Translates to: PTVSKMLAKMQA*FRVTTPEPTAV Trigger: TACAGCTGTAGGCTCAGGTGTAGTGACCCTGAAGCAAGCCTGCATCTTAGCTAGCATCTTCGAAACTGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS GCA 72 bp | CCAGAAATCGGAAGCTTCAAAAACGAAGCCACGAGCTaGCACACAGCAGAACCAAACATAGCACTGACGGAG | + |
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Preference number: 6 (lower is better) Translates to: PEIGSFKNEATS*HTAEPNIALTE Trigger: CTCCGTCAGTGCTATGTTTGGTTCTGCTGTGTGGCAGCTCGTGGCTTCGTTTTTGAAGCTTCCGATTTCTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS CCA 72 bp | CACCCTTCTGCCCATTTGCCACAAGGGAGAAACCAATaGTTGCACCGACAATACAATGGGTCCCAGAAATCG | + |
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Preference number: 6 (lower is better) Translates to: HPSAHLPQGRNQ*LHRQYNGSQKS Trigger: CGATTTCTGGGACCCATTGTATTGTCGGTGCAACCATTGGTTTCTCCCTTGTGGCAAATGGGCAGAAGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS CAA 90 bp | GCTTCAGGGTCACTACACCTGAGCCTACAGCTGTACCGAACGAATTaGCTACATCATTGGCTCCCACGGAGAATGCCAAGACAAATGCAA | + |
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Preference number: 6 (lower is better) Translates to: ASGSLHLSLQLYRTN*LHHWLPRRMPRQMQ Trigger: TTGCATTTGTCTTGGCATTCTCCGTGGGAGCCAATGATGTAGCAAATTCGTTCGGTACAGCTGTAGGCTCAGGTGTAGTGACCCTGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS GCA 72 bp | CTTCTGCCCATTTGCCACAAGGGAGAAACCAATGGTTaGACCGACAATACAATGGGTCCCAGAAATCGGAAG | + |
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Preference number: 6 (lower is better) Translates to: LLPICHKGETNG*TDNTMGPRNRK Trigger: CTTCCGATTTCTGGGACCCATTGTATTGTCGGTGCAACCATTGGTTTCTCCCTTGTGGCAAATGGGCAGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS GCA 72 bp | CCAGTGGCACACACTACCTCAGACACAGGATTCCTATaGTCAACGTCTCCAGGAGCCATCTTTGTTTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PVAHTTSDTGFL*STSPGAIFVSS Trigger: TGAAGAAACAAAGATGGCTCCTGGAGACGTTGAGCATAGGAATCCTGTGTCTGAGGTAGTGTGTGCCACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS CAA 72 bp | TCACTACACCTGAGCCTACAGCTGTACCGAACGAATTaGCTACATCATTGGCTCCCACGGAGAATGCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: SLHLSLQLYRTN*LHHWLPRRMPR Trigger: TCTTGGCATTCTCCGTGGGAGCCAATGATGTAGCAAATTCGTTCGGTACAGCTGTAGGCTCAGGTGTAGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS CAA 72 bp | CCTTCTGCCCATTTGCCACAAGGGAGAAACCAATGGTaGCACCGACAATACAATGGGTCCCAGAAATCGGAA | + |
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Preference number: 6 (lower is better) Translates to: PSAHLPQGRNQW*HRQYNGSQKSE Trigger: TTCCGATTTCTGGGACCCATTGTATTGTCGGTGCAACCATTGGTTTCTCCCTTGTGGCAAATGGGCAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS CAA 72 bp | AAATGTTTCGAAACAGTCGCCAGTCAACAGCCTTCTTaGATCGGAGCCAGCCAACAGACACAACAGAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: KCFETVASQQPS*IGASQQTQQSP Trigger: TGGGCTCTGTTGTGTCTGTTGGCTGGCTCCGATCAAAGAAGGCTGTTGACTGGCGACTGTTTCGAAACATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS CAA 90 bp | ACTACACCTGAGCCTACAGCTGTACCGAACGAATTTGCTACATCATaGGCTCCCACGGAGAATGCCAAGACAAATGCAATGATGAAGCCC | + |
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Preference number: 6 (lower is better) Translates to: TTPEPTAVPNEFATS*APTENAKTNAMMKP Trigger: GGGCTTCATCATTGCATTTGTCTTGGCATTCTCCGTGGGAGCCAATGATGTAGCAAATTCGTTCGGTACAGCTGTAGGCTCAGGTGTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS GCA 72 bp | TATCAGTTCAGACCACTTGACACCCTTCTGCCCATTTaGCACAAGGGAGAAACCAATGGTTGCACCGACAAT | + |
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Preference number: 6 (lower is better) Translates to: YQFRPLDTLLPI*HKGETNGCTDN Trigger: ATTGTCGGTGCAACCATTGGTTTCTCCCTTGTGGCAAATGGGCAGAAGGGTGTCAAGTGGTCTGAACTGATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS CAA 72 bp | GAGCCTACAGCTGTACCGAACGAATTTGCTACATCATaGGCTCCCACGGAGAATGCCAAGACAAATGCAATG | + |
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Preference number: 6 (lower is better) Translates to: EPTAVPNEFATS*APTENAKTNAM Trigger: CATTGCATTTGTCTTGGCATTCTCCGTGGGAGCCAATGATGTAGCAAATTCGTTCGGTACAGCTGTAGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS CAA 72 bp | AAACATAGCACTGACGGAGCCAGCCATGAGCAGATCTaGAGTTTCGTTGTACAGCTCCACATCTATCAAGCC | + |
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Preference number: 6 (lower is better) Translates to: KHSTDGASHEQI*SFVVQLHIYQA Trigger: GGCTTGATAGATGTGGAGCTGTACAACGAAACTCAAGATCTGCTCATGGCTGGCTCCGTCAGTGCTATGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS CAA 90 bp | GGAGAGACGAACCACGACATCACAATTTTTATCAGTTCAGACCACTaGACACCCTTCTGCCCATTTGCCACAAGGGAGAAACCAATGGTT | + |
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Preference number: 6 (lower is better) Translates to: GETNHDITIFISSDH*TPFCPFATREKPMV Trigger: AACCATTGGTTTCTCCCTTGTGGCAAATGGGCAGAAGGGTGTCAAGTGGTCTGAACTGATAAAAATTGTGATGTCGTGGTTCGTCTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS CCA 72 bp | ACAAGGGAGAAACCAATGGTTGCACCGACAATACAATaGGTCCCAGAAATCGGAAGCTTCAAAAACGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: TREKPMVAPTIQ*VPEIGSFKNEA Trigger: GGCTTCGTTTTTGAAGCTTCCGATTTCTGGGACCCATTGTATTGTCGGTGCAACCATTGGTTTCTCCCTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS TCA 72 bp | ACCACGACATCACAATTTTTATCAGTTCAGACCACTTaGCACCCTTCTGCCCATTTGCCACAAGGGAGAAAC | + |
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Preference number: 6 (lower is better) Translates to: TTTSQFLSVQTT*HPSAHLPQGRN Trigger: GTTTCTCCCTTGTGGCAAATGGGCAGAAGGGTGTCAAGTGGTCTGAACTGATAAAAATTGTGATGTCGTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS GCA 72 bp | ACAATTTTTATCAGTTCAGACCACTTGACACCCTTCTaGCCATTTGCCACAAGGGAGAAACCAATGGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: TIFISSDHLTPF*PFATREKPMVA Trigger: TGCAACCATTGGTTTCTCCCTTGTGGCAAATGGGCAGAAGGGTGTCAAGTGGTCTGAACTGATAAAAATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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| CDS CAA 72 bp | AACCACGACATCACAATTTTTATCAGTTCAGACCACTaGACACCCTTCTGCCCATTTGCCACAAGGGAGAAA | + |
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Preference number: 6 (lower is better) Translates to: NHDITIFISSDH*TPFCPFATREK Trigger: TTTCTCCCTTGTGGCAAATGGGCAGAAGGGTGTCAAGTGGTCTGAACTGATAAAAATTGTGATGTCGTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028880.10 ENSMUST00000110315.2 |
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