Pregenerated sensors for SLC1A6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005357Ensembl transcript IDs: ENSMUST00000005490.10, ENSMUST00000217717.2
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GGCAGTCCCCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGCAGGCGCAAGCGCGTaGGCAGTGCTCTCTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: GSPQRTHTEHVCSAHSQLAGASA*AVLSAA Trigger: TGCAGCAGAGAGCACTGCGCACGCGCTTGCGCCTGC...CAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGGGGACTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR GCA 90 bp | GAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCCCAGGACTCATTCGGCCCTCACGGTaGAGCCCCTCCTTGGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: EHVCSAHSQLGNRLSPGLIRPSR*SPSLEP Trigger: GGGCTCCAAGGAGGGGCTGCACCGTGAGGGCCGAAT...GAGTCCTGGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR GCA 90 bp | CCCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGTCCTGCCTGGGGGATaGCAGCTGCTCCTACGCTGG | + |
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Preference number: 4 (lower is better) Translates to: PREPTQNMYVQPTVSWATVLPGG*QLLLRW Trigger: CCAGCGTAGGAGCAGCTGGCATCCCCCAGGCAGGAC...GGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR CCA 90 bp | CCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCCCCGTGCTCTCGGGTCATaGTCTGCAGGCGCAAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: PHRTCMFSPQSVGQPIVPRALGS*SAGASA Trigger: CGCGCTTGCGCCTGCAGACCATGACCCGAGAGCACG...GGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR GCA 90 bp | CACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCCCACGCAGTGCTCTCTGCTaGAGGCTGTCCTGCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: HTEHVCSAHSQLGNRLSPRSALC*RLSCRP Trigger: GGGCCTGCAGGACAGCCTGCAGCAGAGAGCACTGCG...TGGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR GCA 90 bp | CCCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGTGCGCAGTGCTCTCTaGTGCAGGCTGTCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PREPTQNMYVQPTVSWATVRSAL*CRLSCR Trigger: CCTGCAGGACAGCCTGCAGCAGAGAGCACTGCGCAC...GGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR GCA 90 bp | GGCAGTCCCCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGCAAGCGCGTGCGCAGTaGTCTCTGCTGCAGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: GSPQRTHTEHVCSAHSQLQARAQ*SLLQAV Trigger: GACAGCCTGCAGCAGAGAGCACTGCGCACGCGCTTG...CAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGGGGACTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR GCA 90 bp | CACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCCCATCTCGGGTCATGGTCTaGAGGCGCAAGCGCGTGCGC | + |
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Preference number: 4 (lower is better) Translates to: HTEHVCSAHSQLGNRLSPSRVMV*RRKRVR Trigger: GCGCACGCGCTTGCGCCTGCAGACCATGACCCGAGA...TGGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR TCA 90 bp | ATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCCCAGGACTCCCAGCAAGGCCCAAGGCATTaGTGCCATTGGCTGAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: MYVQPTVSWATDCPQDSQQGPRH*CHWLSQ Trigger: CTGGCTCAGCCAATGGCATCAATGCCTTGGGCCTTG...CTGGGAGTCCTGGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR TCA 90 bp | CAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCCCAGGACGCAGCACGAACCTGGTaGTGCGACGATCCACACCCA | + |
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Preference number: 4 (lower is better) Translates to: QNMYVQPTVSWATDCPQDAARTW*CDDPHP Trigger: TGGGTGTGGATCGTCGCATCACCAGGTTCGTGCTGC...GTCCTGGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR TCA 90 bp | CCCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCCAGTGCCATCCATGTTaGCAGTGGCCCCCACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: PREPTQNMYVQPTVSWATQCHPC*QWPPQA Trigger: TGCCTGTGGGGGCCACTGTCAACATGGATGGCACTG...GGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR GCA 90 bp | CCCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCAGGAAGCGCCTCACGTaGTCTCGGGTCATGGTCTGC | + |
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Preference number: 4 (lower is better) Translates to: PREPTQNMYVQPTVSWATRKRLT*SRVMVC Trigger: GCAGACCATGACCCGAGAGCACGTGAGGCGCTTCCT...GGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| 3UTR CAA 72 bp | ACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTaGGGCAACCGATTGTCCCCAGGACTCCCAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: THTEHVCSAHSQ*GNRLSPGLPAQ Trigger: CTGGGCTGGGAGTCCTGGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR TCA 90 bp | AGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCCCAGGACTTGCCCAAGGCCCGGGTaGCATTTTCCAGGATGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RTCMFSPQSVGQPIVPRTCPRPG*HFPGCW Trigger: CCAGCATCCTGGAAAATGTCACCCGGGCCTTGGGCA...AGTCCTGGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR GCA 90 bp | CCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCCCCATGTAGTACACAGCTaGCCGCATTCCCATCCGCCC | + |
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Preference number: 4 (lower is better) Translates to: PHRTCMFSPQSVGQPIVPHVVHS*PHSHPP Trigger: GGGCGGATGGGAATGCGGGCAGCTGTGTACTACATG...GGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR CCA 90 bp | CCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCCCAGGATGTGGGAGACATaGAGGCCCCCAGCTCTGAAC | + |
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Preference number: 4 (lower is better) Translates to: PHRTCMFSPQSVGQPIVPRMWET*RPPALN Trigger: GTTCAGAGCTGGGGGCCTCCATGTCTCCCACATCCT...GGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR TCA 90 bp | AGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCCCAGGACTGGAGGCCCCCAGCTCTaGACCATTGTCTGTCCTTAC | + |
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Preference number: 4 (lower is better) Translates to: RTCMFSPQSVGQPIVPRTGGPQL*TIVCPY Trigger: GTAAGGACAGACAATGGTTCAGAGCTGGGGGCCTCC...AGTCCTGGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR TCA 90 bp | ACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCCCAGGCTTCATGCCACCAATaGCCAGCCCAAAGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: TQNMYVQPTVSWATDCPQASCHQ*PAQRPQ Trigger: CTGTGGCCTTTGGGCTGGTCATTGGTGGCATGAAGC...CTGGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR TCA 90 bp | GAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCCCAGGACTCATTGATGCCATTGGCTaGGCCAGGTACAGGCACAGT | + |
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Preference number: 4 (lower is better) Translates to: EHVCSAHSQLGNRLSPGLIDAIG*ARYRHS Trigger: ACTGTGCCTGTACCTGGCTCAGCCAATGGCATCAAT...GAGTCCTGGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR TCA 90 bp | AGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATGTGTACATGCCCAGCTaGCCTCCAAGGACAGCCATG | + |
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Preference number: 4 (lower is better) Translates to: REPTQNMYVQPTVSWATDVYMPS*PPRTAM Trigger: CATGGCTGTCCTTGGAGGTCAGCTGGGCATGTACAC...ATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR GCA 90 bp | CGGCAGTCCCCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTAGGACACGGCCTTTGTaGTTCATGCCACCAATGACC | + |
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Preference number: 4 (lower is better) Translates to: RQSPENPHRTCMFSPQSVRTRPL*FMPPMT Trigger: GGTCATTGGTGGCATGAAGCACAAAGGCCGTGTCCT...AACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGGGGACTGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR GCA 90 bp | CGGCAGTCCCCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTCAGTCAGTGTGTACATaGCCAGCTGACCTCCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: RQSPENPHRTCMFSPQSVQSVCT*PADLQG Trigger: TCCTTGGAGGTCAGCTGGGCATGTACACACTGACTG...AACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGGGGACTGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR GCA 90 bp | GAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCCCAGGACTCTCCCGTTGGGACAAATaGTCAATGACAGCCGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: EHVCSAHSQLGNRLSPGLSRWDK*SMTAAP Trigger: TGGAGCGGCTGTCATTGAGCATTTGTCCCAACGGGA...GAGTCCTGGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR CCA 90 bp | CCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGTTTCTACTGAGGATGTaGGAGACATGGAGGCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: PENPHRTCMFSPQSVGQPFLLRM*ETWRPP Trigger: TGGGGGCCTCCATGTCTCCCACATCCTCAGTAGAAA...CGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR CCA 90 bp | AACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCAGGGTTTCCCCAGGCTaGGTAGAGTCAGCTCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: NPHRTCMFSPQSVGQPIVRVSPG*VESAQP Trigger: AGGCTGAGCTGACTCTACCCAGCCTGGGGAAACCCT...GACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR GCA 90 bp | CACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCCCAGGTAACACCAGCATCTaGAGCATCCTCATGAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HTEHVCSAHSQLGNRLSPGNTSI*SILMSS Trigger: GCTGCTCATGAGGATGCTGCAGATGCTGGTGTTACC...TGGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR GCA 90 bp | GGCAGTCCCCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGCTTGTTGTCCAGGGATaGCATACCTGTGACAAGGCT | + |
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Preference number: 4 (lower is better) Translates to: GSPQRTHTEHVCSAHSQLLVVQG*HTCDKA Trigger: AGCCTTGTCACAGGTATGGCATCCCTGGACAACAAG...CAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGGGGACTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR GCA 90 bp | GCAGTCCCCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGAGTGATAGGCAGAGTTaGAGAGCTGGAAGAGGTACC | + |
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Preference number: 4 (lower is better) Translates to: AVPREPTQNMYVQPTVSWSDRQS*RAGRGT Trigger: GGTACCTCTTCCAGCTCTGCAACTCTGCCTATCACT...CCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGGGGACTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR GCA 90 bp | CCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGAGCAATAAAGATGGCTaGCAAGGCCTCGTAGAGTGC | + |
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Preference number: 4 (lower is better) Translates to: PENPHRTCMFSPQSVGQPSNKDG*QGLVEC Trigger: GCACTCTACGAGGCCTTGGCAGCCATCTTTATTGCT...CGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR CCA 90 bp | CATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCCCAGGACTCCCAGAACAGGATGCCCACTaGTGCATACCAGATGATGAT | + |
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Preference number: 4 (lower is better) Translates to: HVCSAHSQLGNRLSPGLPEQDAH*CIPDDD Trigger: ATCATCATCTGGTATGCACCAGTGGGCATCCTGTTC...TGGGAGTCCTGGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR CCA 90 bp | CGGCAGTCCCCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTAGCTCCAGCTCCCGTTaGGACAAATGCTCAATGACA | + |
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Preference number: 4 (lower is better) Translates to: RQSPENPHRTCMFSPQSVSSSSR*DKCSMT Trigger: TGTCATTGAGCATTTGTCCCAACGGGAGCTGGAGCT...AACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGGGGACTGCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR TCA 90 bp | CAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGAGAAAGGAGAAGTACTTaGTCTGGCGGTAGGAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: QRTHTEHVCSAHSQLGNRERRST*SGGRRA Trigger: AGCTCTCCTACCGCCAGATCAAGTACTTCTCCTTTC...TCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR TCA 90 bp | CAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGAGTAGCATACCACCAATaGAGGGAAAGGGGTTCCGAT | + |
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Preference number: 4 (lower is better) Translates to: QRTHTEHVCSAHSQLGNRVAYHQ*RERGSD Trigger: ATCGGAACCCCTTTCCCTTCATTGGTGGTATGCTAC...TCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR TCA 90 bp | CCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGTTCTTGTGCCATGAGTaGCTTATAGGGTTTCCCCAG | + |
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Preference number: 4 (lower is better) Translates to: PENPHRTCMFSPQSVGQPFLCHE*LIGFPQ Trigger: CTGGGGAAACCCTATAAGTCACTCATGGCACAAGAA...CGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR TCA 90 bp | CGGCAGTCCCCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGTTTCATTTTCTACTaGGGATGTGGGAGACATGGA | + |
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Preference number: 4 (lower is better) Translates to: RQSPENPHRTCMFSPQSVGFIFY*GCGRHG Trigger: TCCATGTCTCCCACATCCTCAGTAGAAAATGAAACC...AACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGGGGACTGCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR TCA 90 bp | CCCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCCCTTTTCTTGTGCCATaGGTGACTTATAGGGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: PREPTQNMYVQPTVSWATPFLVP*VTYRVS Trigger: GGAAACCCTATAAGTCACTCATGGCACAAGAAAAGG...GGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR GCA 90 bp | CATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCCCAGGACTCCCAGATGCCGATGAAAACTaGAATGACTGTAGTCACCAT | + |
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Preference number: 4 (lower is better) Translates to: HVCSAHSQLGNRLSPGLPDADEN*NDCSHH Trigger: ATGGTGACTACAGTCATTGCAGTTTTCATCGGCATC...TGGGAGTCCTGGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR CCA 90 bp | AACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCAATCCCCCAGTACATTaGTCATTGTACGAAGTCGGT | + |
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Preference number: 4 (lower is better) Translates to: NPHRTCMFSPQSVGQPIVNPPVH*SLYEVG Trigger: ACCGACTTCGTACAATGACCAATGTACTGGGGGATT...GACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS GCA 90 bp | TGCAGGCGCAAGCGCGTGCGCAGTGCTCTCTGCTGCAGGCTGTCCTaGAGGCCCTGCAGACAGCCCCCACCGGCACCGCTCTCCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: CRRKRVRSALCCRLS*RPCRQPPPAPLSLR Trigger: CCTGAGGGAGAGCGGTGCCGGTGGGGGCTGTCTGCAGGGCCTGCAGGACAGCCTGCAGCAGAGAGCACTGCGCACGCGCTTGCGCCTGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005490.10 ENSMUST00000217717.2 |
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| CDS GCA 90 bp | TCTCGGGTCATGGTCTGCAGGCGCAAGCGCGTGCGCAGTGCTCTCTaGTGCAGGCTGTCCTGCAGGCCCTGCAGACAGCCCCCACCGGCA | + |
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Preference number: 5 (lower is better) Translates to: SRVMVCRRKRVRSAL*CRLSCRPCRQPPPA Trigger: TGCCGGTGGGGGCTGTCTGCAGGGCCTGCAGGACAGCCTGCAGCAGAGAGCACTGCGCACGCGCTTGCGCCTGCAGACCATGACCCGAGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000005490.10 ENSMUST00000217717.2 |
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| CDS GCA 90 bp | GCATTCCGGCGCAGGAAGCGCCTCACGTGCTCTCGGGTCATGGTCTaGAGGCGCAAGCGCGTGCGCAGTGCTCTCTGCTGCAGGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: AFRRRKRLTCSRVMV*RRKRVRSALCCRLS Trigger: GGACAGCCTGCAGCAGAGAGCACTGCGCACGCGCTTGCGCCTGCAGACCATGACCCGAGAGCACGTGAGGCGCTTCCTGCGCCGGAATGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005490.10 ENSMUST00000217717.2 |
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| CDS GCA 90 bp | ACTGTGAGCAAGATGAAGGCATTCCGGCGCAGGAAGCGCCTCACGTaGTCTCGGGTCATGGTCTGCAGGCGCAAGCGCGTGCGCAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: TVSKMKAFRRRKRLT*SRVMVCRRKRVRSA Trigger: AGCACTGCGCACGCGCTTGCGCCTGCAGACCATGACCCGAGAGCACGTGAGGCGCTTCCTGCGCCGGAATGCCTTCATCTTGCTCACAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005490.10 ENSMUST00000217717.2 |
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| CDS CCA 90 bp | AGGCTGGGTAGAGTCAGCTCAGCCTCCTGCAGCTCCAGCTCCCGTTaGGACAAATGCTCAATGACAGCCGCTCCAATCGAATCCCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: RLGRVSSASCSSSSR*DKCSMTAAPIESPS Trigger: ACTGGGGGATTCGATTGGAGCGGCTGTCATTGAGCATTTGTCCCAACGGGAGCTGGAGCTGCAGGAGGCTGAGCTGACTCTACCCAGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS GCA 90 bp | GCTGAGCCAGGTACAGGCACAGTCTCCTCAAAGCTTATCACCTCCTaGAGGGTGCCCAAGGCCCGGGTGACATTTTCCAGGATGCTGGTT | + |
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Preference number: 5 (lower is better) Translates to: AEPGTGTVSSKLITS*RVPKARVTFSRMLV Trigger: AACCAGCATCCTGGAAAATGTCACCCGGGCCTTGGGCACCCTGCAGGAGGTGATAAGCTTTGAGGAGACTGTGCCTGTACCTGGCTCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS GCA 90 bp | AGAGTCAGCTCAGCCTCCTGCAGCTCCAGCTCCCGTTGGGACAAATaGTCAATGACAGCCGCTCCAATCGAATCCCCCAGTACATTGGTC | + |
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Preference number: 5 (lower is better) Translates to: RVSSASCSSSSRWDK*SMTAAPIESPSTLV Trigger: GACCAATGTACTGGGGGATTCGATTGGAGCGGCTGTCATTGAGCATTTGTCCCAACGGGAGCTGGAGCTGCAGGAGGCTGAGCTGACTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR CAA 90 bp | CGGCAGTCCCCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTCGCCCTGTCGCCTTGTaGTCCAGGGATGCCATACCT | + |
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Preference number: 5 (lower is better) Translates to: RQSPENPHRTCMFSPQSVRPVAL*SRDAIP Trigger: AGGTATGGCATCCCTGGACAACAAGGCGACAGGGCG...AACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGGGGACTGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS TCA 90 bp | GGCCACAGAGAAGACCACAAGGCCCAAGGCATTGATGCCATTGGCTaGGCCAGGTACAGGCACAGTCTCCTCAAAGCTTATCACCTCCTG | + |
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Preference number: 5 (lower is better) Translates to: GHREDHKAQGIDAIG*ARYRHSLLKAYHLL Trigger: CAGGAGGTGATAAGCTTTGAGGAGACTGTGCCTGTACCTGGCTCAGCCAATGGCATCAATGCCTTGGGCCTTGTGGTCTTCTCTGTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS TCA 90 bp | GCTCAGCCTCCTGCAGCTCCAGCTCCCGTTGGGACAAATGCTCAATaGCAGCCGCTCCAATCGAATCCCCCAGTACATTGGTCATTGTAC | + |
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Preference number: 5 (lower is better) Translates to: AQPPAAPAPVGTNAQ*QPLQSNPPVHWSLY Trigger: GTACAATGACCAATGTACTGGGGGATTCGATTGGAGCGGCTGTCATTGAGCATTTGTCCCAACGGGAGCTGGAGCTGCAGGAGGCTGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS GCA 90 bp | GCCGATGAAAACTGCAATGACTGTAGTCACCATGTAGTACACAGCTaGCCGCATTCCCATCCGCCCTGTCGCCTTGTTGTCCAGGGATGC | + |
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Preference number: 5 (lower is better) Translates to: ADENCNDCSHHVVHS*PHSHPPCRLVVQGC Trigger: GCATCCCTGGACAACAAGGCGACAGGGCGGATGGGAATGCGGGCAGCTGTGTACTACATGGTGACTACAGTCATTGCAGTTTTCATCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005490.10 ENSMUST00000217717.2 |
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| CDS GCA 90 bp | GCCTCATTGAGGCTGTCAAAGAAGTCCCTCAGGACACGGCCTTTGTaGTTCATGCCACCAATGACCAGCCCAAAGGCCACAGAGAAGACC | + |
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Preference number: 5 (lower is better) Translates to: ASLRLSKKSLRTRPL*FMPPMTSPKATEKT Trigger: GGTCTTCTCTGTGGCCTTTGGGCTGGTCATTGGTGGCATGAAGCACAAAGGCCGTGTCCTGAGGGACTTCTTTGACAGCCTCAATGAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR CAA 90 bp | GCAGTCCCCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGATCCGCCCTGTCGCCTaGTTGTCCAGGGATGCCATA | + |
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Preference number: 5 (lower is better) Translates to: AVPREPTQNMYVQPTVSWIRPVA*LSRDAI Trigger: TATGGCATCCCTGGACAACAAGGCGACAGGGCGGAT...CCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGGGGACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS GCA 90 bp | GTACTTGATCTGGCGGTAGGAGAGCTGGTACGGGCGCAAGGCAAATaGCAAGCTGACACCAATGATCACAGCGCTGACTGTGAGCAAGAT | + |
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Preference number: 5 (lower is better) Translates to: VLDLAVGELVRAQGK*QADTNDHSADCEQD Trigger: ATCTTGCTCACAGTCAGCGCTGTGATCATTGGTGTCAGCTTGGCATTTGCCTTGCGCCCGTACCAGCTCTCCTACCGCCAGATCAAGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005490.10 ENSMUST00000217717.2 |
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| CDS-3UTR CAA 90 bp | GCAGTCCCCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGCTCAGGACACGGCCTTaGTGCTTCATGCCACCAATG | + |
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Preference number: 5 (lower is better) Translates to: AVPREPTQNMYVQPTVSWLRTRP*CFMPPM Trigger: CATTGGTGGCATGAAGCACAAAGGCCGTGTCCTGAG...CCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGGGGACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS CCA 90 bp | AGGTGGAAACATATTTCTGACCAGGTCCATGAAAGCATCAGCTGTTaGGACAGTCTCAATTCGGCCCTCACGGTGCAGCCCCTCCTTGGA | + |
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Preference number: 5 (lower is better) Translates to: RWKHISDQVHESISC*DSLNSALTVQPLLG Trigger: TCCAAGGAGGGGCTGCACCGTGAGGGCCGAATTGAGACTGTCCCAACAGCTGATGCTTTCATGGACCTGGTCAGAAATATGTTTCCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR CAA 90 bp | AGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGACAAGGCCCAAGGCATaGATGCCATTGGCTGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: RTHTEHVCSAHSQLGNRLTRPKA*MPLAEP Trigger: TGGCTCAGCCAATGGCATCAATGCCTTGGGCCTTGT...CAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR CAA 90 bp | CCCAGAGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCTGTGTCTTAAACTGTTaGAAGCAGGCCTCCACAAGG | + |
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Preference number: 5 (lower is better) Translates to: PREPTQNMYVQPTVSWATCVLNC*KQASTR Trigger: CCTTGTGGAGGCCTGCTTCAAACAGTTTAAGACACA...GGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR CAA 90 bp | AGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCCCAGGACTTGTCTGTCCTTACAATaGTCCTTGTCACCACTCGTG | + |
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Preference number: 5 (lower is better) Translates to: RTCMFSPQSVGQPIVPRTCLSLQ*SLSPLV Trigger: CACGAGTGGTGACAAGGACAATTGTAAGGACAGACA...AGTCCTGGGGACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR CAA 90 bp | AGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGGAATCCCCCAGTACATaGGTCATTGTACGAAGTCGG | + |
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Preference number: 5 (lower is better) Translates to: RTHTEHVCSAHSQLGNRLESPST*VIVRSR Trigger: CCGACTTCGTACAATGACCAATGTACTGGGGGATTC...CAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS CCA 90 bp | TTTCCAGGATGCTGGTTTCATTTTCTACTGAGGATGTGGGAGACATaGAGGCCCCCAGCTCTGAACCATTGTCTGTCCTTACAATTGTCC | + |
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Preference number: 5 (lower is better) Translates to: FPGCWFHFLLRMWET*RPPALNHCLSLQLS Trigger: GGACAATTGTAAGGACAGACAATGGTTCAGAGCTGGGGGCCTCCATGTCTCCCACATCCTCAGTAGAAAATGAAACCAGCATCCTGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR CAA 90 bp | AGAACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGCTCATAATAGCCTCATaGAGGCTGTCAAAGAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: RTHTEHVCSAHSQLGNRLLIIAS*RLSKKS Trigger: GGACTTCTTTGACAGCCTCAATGAGGCTATTATGAG...CAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS-3UTR CAA 90 bp | AACCCACACAGAACATGTATGTTCAGCCCACAGTCAGTTGGGCAACCGATTGTCCTCATAGTTGTTGACTaGAGCAATAAAGATGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: NPHRTCMFSPQSVGQPIVLIVVD*SNKDGC Trigger: GCAGCCATCTTTATTGCTCAAGTCAACAACTATGAG...GACAATCGGTTGCCCAACTGACTGTGGGCTGAACATACATGTTCTGTGTGGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS GCA 72 bp | ATGGTCTGCAGGCGCAAGCGCGTGCGCAGTGCTCTCTaGTGCAGGCTGTCCTGCAGGCCCTGCAGACAGCCC | + |
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Preference number: 6 (lower is better) Translates to: MVCRRKRVRSAL*CRLSCRPCRQP Trigger: GGGCTGTCTGCAGGGCCTGCAGGACAGCCTGCAGCAGAGAGCACTGCGCACGCGCTTGCGCCTGCAGACCAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005490.10 ENSMUST00000217717.2 |
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| CDS GCA 72 bp | CGTGCTCTCGGGTCATGGTCTGCAGGCGCAAGCGCGTaGGCAGTGCTCTCTGCTGCAGGCTGTCCTGCAGGC | + |
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Preference number: 6 (lower is better) Translates to: RALGSWSAGASA*AVLSAAGCPAG Trigger: GCCTGCAGGACAGCCTGCAGCAGAGAGCACTGCGCACGCGCTTGCGCCTGCAGACCATGACCCGAGAGCACG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005490.10 ENSMUST00000217717.2 |
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| CDS GCA 72 bp | CGCAGGAAGCGCCTCACGTGCTCTCGGGTCATGGTCTaGAGGCGCAAGCGCGTGCGCAGTGCTCTCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RRKRLTCSRVMV*RRKRVRSALCC Trigger: GCAGCAGAGAGCACTGCGCACGCGCTTGCGCCTGCAGACCATGACCCGAGAGCACGTGAGGCGCTTCCTGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005490.10 ENSMUST00000217717.2 |
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| CDS CCA 72 bp | TCCGGCGCAGGAAGCGCCTCACGTGCTCTCGGGTCATaGTCTGCAGGCGCAAGCGCGTGCGCAGTGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SGAGSASRALGS*SAGASACAVLS Trigger: AGAGAGCACTGCGCACGCGCTTGCGCCTGCAGACCATGACCCGAGAGCACGTGAGGCGCTTCCTGCGCCGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005490.10 ENSMUST00000217717.2 |
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| CDS GCA 72 bp | AAGATGAAGGCATTCCGGCGCAGGAAGCGCCTCACGTaGTCTCGGGTCATGGTCTGCAGGCGCAAGCGCGTG | + |
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Preference number: 6 (lower is better) Translates to: KMKAFRRRKRLT*SRVMVCRRKRV Trigger: CACGCGCTTGCGCCTGCAGACCATGACCCGAGAGCACGTGAGGCGCTTCCTGCGCCGGAATGCCTTCATCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005490.10 ENSMUST00000217717.2 |
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| CDS GCA 72 bp | TCAGCTGTTGGGACAGTCTCAATTCGGCCCTCACGGTaGAGCCCCTCCTTGGAGCCCTTCCCAGGATGTATG | + |
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Preference number: 6 (lower is better) Translates to: SAVGTVSIRPSR*SPSLEPFPGCM Trigger: CATACATCCTGGGAAGGGCTCCAAGGAGGGGCTGCACCGTGAGGGCCGAATTGAGACTGTCCCAACAGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS CAA 72 bp | TACACAGCTGCCCGCATTCCCATCCGCCCTGTCGCCTaGTTGTCCAGGGATGCCATACCTGTGACAAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: YTAARIPIRPVA*LSRDAIPVTRL Trigger: CAGCCTTGTCACAGGTATGGCATCCCTGGACAACAAGGCGACAGGGCGGATGGGAATGCGGGCAGCTGTGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005490.10 ENSMUST00000217717.2 |
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| CDS GCA 72 bp | CTGGCGGTAGGAGAGCTGGTACGGGCGCAAGGCAAATaGCAAGCTGACACCAATGATCACAGCGCTGACTGT | + |
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Preference number: 6 (lower is better) Translates to: LAVGELVRAQGK*QADTNDHSADC Trigger: ACAGTCAGCGCTGTGATCATTGGTGTCAGCTTGGCATTTGCCTTGCGCCCGTACCAGCTCTCCTACCGCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005490.10 ENSMUST00000217717.2 |
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| CDS GCA 72 bp | GGTACAGGCACAGTCTCCTCAAAGCTTATCACCTCCTaGAGGGTGCCCAAGGCCCGGGTGACATTTTCCAGG | + |
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Preference number: 6 (lower is better) Translates to: GTGTVSSKLITS*RVPKARVTFSR Trigger: CCTGGAAAATGTCACCCGGGCCTTGGGCACCCTGCAGGAGGTGATAAGCTTTGAGGAGACTGTGCCTGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS TCA 72 bp | CCTGCAGCTCCAGCTCCCGTTGGGACAAATGCTCAATaGCAGCCGCTCCAATCGAATCCCCCAGTACATTGG | + |
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Preference number: 6 (lower is better) Translates to: PAAPAPVGTNAQ*QPLQSNPPVHW Trigger: CCAATGTACTGGGGGATTCGATTGGAGCGGCTGTCATTGAGCATTTGTCCCAACGGGAGCTGGAGCTGCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS GCA 72 bp | GCCCTCCTCCAGGCAGCGGAAAGTGATAGGCAGAGTTaGAGAGCTGGAAGAGGTACCCATAGCTGTGATGAG | + |
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Preference number: 6 (lower is better) Translates to: ALLQAAESDRQS*RAGRGTHSCDE Trigger: CTCATCACAGCTATGGGTACCTCTTCCAGCTCTGCAACTCTGCCTATCACTTTCCGCTGCCTGGAGGAGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS TCA 72 bp | CAAAGGCCACAGAGAAGACCACAAGGCCCAAGGCATTaGTGCCATTGGCTGAGCCAGGTACAGGCACAGTCT | + |
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Preference number: 6 (lower is better) Translates to: QRPQRRPQGPRH*CHWLSQVQAQS Trigger: AGACTGTGCCTGTACCTGGCTCAGCCAATGGCATCAATGCCTTGGGCCTTGTGGTCTTCTCTGTGGCCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS GCA 72 bp | AGGCTGTCAAAGAAGTCCCTCAGGACACGGCCTTTGTaGTTCATGCCACCAATGACCAGCCCAAAGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: RLSKKSLRTRPL*FMPPMTSPKAT Trigger: TGTGGCCTTTGGGCTGGTCATTGGTGGCATGAAGCACAAAGGCCGTGTCCTGAGGGACTTCTTTGACAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS CAA 72 bp | TTGAGGCTGTCAAAGAAGTCCCTCAGGACACGGCCTTaGTGCTTCATGCCACCAATGACCAGCCCAAAGGCC | + |
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Preference number: 6 (lower is better) Translates to: LRLSKKSLRTRP*CFMPPMTSPKA Trigger: GGCCTTTGGGCTGGTCATTGGTGGCATGAAGCACAAAGGCCGTGTCCTGAGGGACTTCTTTGACAGCCTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS GCA 72 bp | AACTGCAATGACTGTAGTCACCATGTAGTACACAGCTaGCCGCATTCCCATCCGCCCTGTCGCCTTGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: NCNDCSHHVVHS*PHSHPPCRLVV Trigger: GACAACAAGGCGACAGGGCGGATGGGAATGCGGGCAGCTGTGTACTACATGGTGACTACAGTCATTGCAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005490.10 ENSMUST00000217717.2 |
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| CDS CCA 72 bp | CATATTTCTGACCAGGTCCATGAAAGCATCAGCTGTTaGGACAGTCTCAATTCGGCCCTCACGGTGCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: HISDQVHESISC*DSLNSALTVQP Trigger: GGGCTGCACCGTGAGGGCCGAATTGAGACTGTCCCAACAGCTGATGCTTTCATGGACCTGGTCAGAAATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS CAA 90 bp | ATAGCCTCATTGAGGCTGTCAAAGAAGTCCCTCAGGACACGGCCTTaGTGCTTCATGCCACCAATGACCAGCCCAAAGGCCACAGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: IASLRLSKKSLRTRP*CFMPPMTSPKATEK Trigger: CTTCTCTGTGGCCTTTGGGCTGGTCATTGGTGGCATGAAGCACAAAGGCCGTGTCCTGAGGGACTTCTTTGACAGCCTCAATGAGGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS CAA 72 bp | GATGTGGGAGACATGGAGGCCCCCAGCTCTGAACCATaGTCTGTCCTTACAATTGTCCTTGTCACCACTCGT | + |
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Preference number: 6 (lower is better) Translates to: DVGDMEAPSSEP*SVLTIVLVTTR Trigger: ACGAGTGGTGACAAGGACAATTGTAAGGACAGACAATGGTTCAGAGCTGGGGGCCTCCATGTCTCCCACATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS CAA 90 bp | TCTACTGAGGATGTGGGAGACATGGAGGCCCCCAGCTCTGAACCATaGTCTGTCCTTACAATTGTCCTTGTCACCACTCGTGTGCTGTAC | + |
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Preference number: 6 (lower is better) Translates to: STEDVGDMEAPSSEP*SVLTIVLVTTRVLY Trigger: GTACAGCACACGAGTGGTGACAAGGACAATTGTAAGGACAGACAATGGTTCAGAGCTGGGGGCCTCCATGTCTCCCACATCCTCAGTAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS TCA 72 bp | GCAACACACCACCAGCATGAAGGAATAAGCCAACGATaGCAGTCAGTGTGTACATGCCCAGCTGACCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: ATHHQHEGISQR*QSVCTCPADLQ Trigger: TTGGAGGTCAGCTGGGCATGTACACACTGACTGTCATCGTTGGCTTATTCCTTCATGCTGGTGGTGTGTTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS CAA 72 bp | AGGCCCCCAGCTCTGAACCATTGTCTGTCCTTACAATaGTCCTTGTCACCACTCGTGTGCTGTACTGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: RPPALNHCLSLQ*SLSPLVCCTVS Trigger: AGACACAGTACAGCACACGAGTGGTGACAAGGACAATTGTAAGGACAGACAATGGTTCAGAGCTGGGGGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS CAA 72 bp | CAGCCGCTCCAATCGAATCCCCCAGTACATTGGTCATaGTACGAAGTCGGTCAAGGAACCAATCCACAGCTA | + |
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Preference number: 6 (lower is better) Translates to: QPLQSNPPVHWS*YEVGQGTNPQL Trigger: TAGCTGTGGATTGGTTCCTTGACCGACTTCGTACAATGACCAATGTACTGGGGGATTCGATTGGAGCGGCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS CAA 72 bp | TCAATGACAGCCGCTCCAATCGAATCCCCCAGTACATaGGTCATTGTACGAAGTCGGTCAAGGAACCAATCC | + |
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Preference number: 6 (lower is better) Translates to: SMTAAPIESPST*VIVRSRSRNQS Trigger: GGATTGGTTCCTTGACCGACTTCGTACAATGACCAATGTACTGGGGGATTCGATTGGAGCGGCTGTCATTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS CAA 90 bp | GACAAATGCTCAATGACAGCCGCTCCAATCGAATCCCCCAGTACATaGGTCATTGTACGAAGTCGGTCAAGGAACCAATCCACAGCTATG | + |
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Preference number: 6 (lower is better) Translates to: DKCSMTAAPIESPST*VIVRSRSRNQSTAM Trigger: CATAGCTGTGGATTGGTTCCTTGACCGACTTCGTACAATGACCAATGTACTGGGGGATTCGATTGGAGCGGCTGTCATTGAGCATTTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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| CDS CCA 72 bp | CTTAAACTGTTTGAAGCAGGCCTCCACAAGGTTAGGTaGAAACATATTTCTGACCAGGTCCATGAAAGCATC | + |
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Preference number: 6 (lower is better) Translates to: LKLFEAGLHKVR*KHISDQVHESI Trigger: GATGCTTTCATGGACCTGGTCAGAAATATGTTTCCACCTAACCTTGTGGAGGCCTGCTTCAAACAGTTTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005490.10 |
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