Pregenerated sensors for SLC1A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005360Ensembl transcript IDs: ENSMUST00000005493.14, ENSMUST00000157065.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCACCCAGCGTATGGATCTGTCCCAGAGATGTGGTTGGTTGGACTaGGAGATGAGGAGGAAGTGGTGTTATGACGTCGTTTCTTTGGGG | + |
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Preference number: 1 (lower is better) Translates to: STQRMDLSQRCGWLD*EMRRKWCYDVVSLG Trigger: CCCCAAAGAAACGACGTCATAACACCACTTCCTCCTCATCTCCCAGTCCAACCAACCACATCTCTGGGACAGATCCATACGCTGGGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR TCA 90 bp | CTAGGAGTCACTCATTTTCCGGATGAGAACACTGAGGCCAATGGATaGGACAAGGCTCACTCTAGACCATTTGGGAGCCTCACTCTCCGC | + |
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Preference number: 1 (lower is better) Translates to: LGVTHFPDENTEANG*DKAHSRPFGSLTLR Trigger: GCGGAGAGTGAGGCTCCCAAATGGTCTAGAGTGAGCCTTGTCTCATCCATTGGCCTCAGTGTTCTCATCCGGAAAATGAGTGACTCCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR TCA 90 bp | CTTCTAGGATGGCCTTCCACCTGTCTACTGATAGAACGAACATTTTaGACCCAGGATCTAGTGAGCCACACACAGCCTGCCCCTAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: LLGWPSTCLLIERTF*TQDLVSHTQPAPRE Trigger: CTCTCTAGGGGCAGGCTGTGTGTGGCTCACTAGATCCTGGGTTCAAAATGTTCGTTCTATCAGTAGACAGGTGGAAGGCCATCCTAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR CCA 90 bp | CTAAAACCGATAGGTTTGGGCTGCTGCAGAGCCCTCCTTTGTGTTTaGCCGTTTTCCAATCCTATCAGAGTAGGGAGGAAAGAGGAGCTC | + |
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Preference number: 1 (lower is better) Translates to: LKPIGLGCCRALLCV*PFSNPIRVGRKEEL Trigger: GAGCTCCTCTTTCCTCCCTACTCTGATAGGATTGGAAAACGGCCAAACACAAAGGAGGGCTCTGCAGCAGCCCAAACCTATCGGTTTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR CCA 90 bp | GTAGGGAGGAAAGAGGAGCTCACTGGGAAAGTGAGCCCAGGGAGATaGATACATTGTAGAACAGTTTCCAACACTTGGTGCTTAAGAAAG | + |
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Preference number: 1 (lower is better) Translates to: VGRKEELTGKVSPGR*IHCRTVSNTWCLRK Trigger: CTTTCTTAAGCACCAAGTGTTGGAAACTGTTCTACAATGTATCCATCTCCCTGGGCTCACTTTCCCAGTGAGCTCCTCTTTCCTCCCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR CCA 90 bp | GTCAGGGCAGGAGTCAGAAGAAATGGGAACCTCTCAGCTACTCAATaGGTAACTGATAATTGCTCATCAAGTTGTAATGTTTTAAGATTA | + |
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Preference number: 1 (lower is better) Translates to: VRAGVRRNGNLSATQ*VTDNCSSSCNVLRL Trigger: TAATCTTAAAACATTACAACTTGATGAGCAATTATCAGTTACCCATTGAGTAGCTGAGAGGTTCCCATTTCTTCTGACTCCTGCCCTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR CAA 90 bp | AGAACACTGAGGCCAATGGATGAGACAAGGCTCACTCTAGACCATTaGGGAGCCTCACTCTCCGCTCCTCCTCACAGCTGTGCTGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: RTLRPMDETRLTLDH*GASLSAPPHSCAVC Trigger: GCACACAGCACAGCTGTGAGGAGGAGCGGAGAGTGAGGCTCCCAAATGGTCTAGAGTGAGCCTTGTCTCATCCATTGGCCTCAGTGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR CAA 90 bp | AGACCATCCACCCAGCGTATGGATCTGTCCCAGAGATGTGGTTGGTaGGACTGGGAGATGAGGAGGAAGTGGTGTTATGACGTCGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: RPSTQRMDLSQRCGW*DWEMRRKWCYDVVS Trigger: AGAAACGACGTCATAACACCACTTCCTCCTCATCTCCCAGTCCAACCAACCACATCTCTGGGACAGATCCATACGCTGGGTGGATGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR CAA 90 bp | GCTAAAACCGATAGGTTTGGGCTGCTGCAGAGCCCTCCTTTGTGTTaGGCCGTTTTCCAATCCTATCAGAGTAGGGAGGAAAGAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: AKTDRFGLLQSPPLC*AVFQSYQSREERGA Trigger: AGCTCCTCTTTCCTCCCTACTCTGATAGGATTGGAAAACGGCCAAACACAAAGGAGGGCTCTGCAGCAGCCCAAACCTATCGGTTTTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR-3UTR TCA 90 bp | ATGGGATGCTCAGGATCTCTAGAAATTATCTCTAACTGTAGACTGGGAGATGCCGGGCAGGGTCCTTCCTaGTGTTCCAGAAGTTTGGGC | + |
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Preference number: 2 (lower is better) Translates to: MGCSGSLEIISNCRLGDAGQGPS*CSRSLG Trigger: GCCCAAACTTCTGGAACATCAGGAAGGACCCTGCCC...GGCATCTCCCAGTCTACAGTTAGAGATAATTTCTAGAGATCCTGAGCATCCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGACTGTCTTCCCTTGGATTTGGGAAGTGTACCCCAGAAGGGAGGGCCTCACAGTTTCCAACACTTaGTGCTTAAGAAAGCACTTC | + |
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Preference number: 2 (lower is better) Translates to: EETVFPWIWEVYPRREGLTVSNT*CLRKHF Trigger: GAAGTGCTTTCTTAAGCACCAAGTGTTGGAAACTGT...GAGGCCCTCCCTTCTGGGGTACACTTCCCAAATCCAAGGGAAGACAGTCTCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR-3UTR CCA 90 bp | TGGGAGCTGCCTCGCCTGAAAAGAATTCTCCTGCTGTGTTTTCTTCCATCCTCAGCCCTCCTTTGTGTTTaGCCGTTTTCCAATCCTATC | + |
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Preference number: 2 (lower is better) Translates to: WELPRLKRILLLCFLPSSALLCV*PFSNPI Trigger: GATAGGATTGGAAAACGGCCAAACACAAAGGAGGGC...TGAGGATGGAAGAAAACACAGCAGGAGAATTCTTTTCAGGCGAGGCAGCTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR-3UTR TCA 90 bp | ATGGGATGCTCAGGATCTCTAGAAATTATCTCTAACTGTAGACTGGGAGATGCCGGTTGGACTGGGAGATaGGGAGGAAGTGGTGTTATG | + |
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Preference number: 2 (lower is better) Translates to: MGCSGSLEIISNCRLGDAGWTGR*GGSGVM Trigger: CATAACACCACTTCCTCCTCATCTCCCAGTCCAACC...GGCATCTCCCAGTCTACAGTTAGAGATAATTTCTAGAGATCCTGAGCATCCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR-3UTR TCA 90 bp | GGGAGTCAATCAATCATTTTAATTGATCGTAAGTATCTGAGTGGCTGTGTAGCCCCTAGGCCCTTTCCTTaGCCCAGCCCTCTTGATGAG | + |
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Preference number: 2 (lower is better) Translates to: GSQSIILIDRKYLSGCVAPRPFP*PSPLDE Trigger: CTCATCAAGAGGGCTGGGTCAAGGAAAGGGCCTAGG...GGCTACACAGCCACTCAGATACTTACGATCAATTAAAATGATTGATTGACTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157065.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGCTGCCTCGCCTGAAAAGAATTCTCCTGCTGTGTTTTCTTCCATCCTCAATAGAACGAACATTTTaGACCCAGGATCTAGTGAGC | + |
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Preference number: 2 (lower is better) Translates to: WELPRLKRILLLCFLPSSIERTF*TQDLVS Trigger: GCTCACTAGATCCTGGGTTCAAAATGTTCGTTCTAT...TGAGGATGGAAGAAAACACAGCAGGAGAATTCTTTTCAGGCGAGGCAGCTCCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGCTGCCTCGCCTGAAAAGAATTCTCCTGCTGTGTTTTCTTCCATCCTCAGTTTCCAACACTTGGTaGTTAAGAAAGCACTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: WELPRLKRILLLCFLPSSVSNTW*LRKHFS Trigger: AGAGAAGTGCTTTCTTAAGCACCAAGTGTTGGAAAC...TGAGGATGGAAGAAAACACAGCAGGAGAATTCTTTTCAGGCGAGGCAGCTCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR-3UTR CCA 90 bp | ATGGGATGCTCAGGATCTCTAGAAATTATCTCTAACTGTAGACTGGGAGATGCCGCTGGTACTGTCAGATaGCTCTCACTGAGTATCTTT | + |
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Preference number: 2 (lower is better) Translates to: MGCSGSLEIISNCRLGDAAGTVR*LSLSIF Trigger: AAAGATACTCAGTGAGAGCCATCTGACAGTACCAGC...GGCATCTCCCAGTCTACAGTTAGAGATAATTTCTAGAGATCCTGAGCATCCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR-3UTR TCA 90 bp | TCTCCTGCTGTGTTTTCTTCCATCCTCAGTGATGTTATCCTCATGCTGATTCATTTCCACACTAAGACTTaGGCACACTTGCTAGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SPAVFSSILSDVILMLIHFHTKT*AHLLVF Trigger: GAAGACTAGCAAGTGTGCTCAAGTCTTAGTGTGGAA...ATGAATCAGCATGAGGATAACATCACTGAGGATGGAAGAAAACACAGCAGGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR-3UTR GCA 90 bp | ATTCTAGATGCTCAGTCTGTTAGCATAATTATGTCCATTCATCATTTTCGCTCACCGATAGGTTTGGGCTaGTGCAGAGCCCTCCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: ILDAQSVSIIMSIHHFRSPIGLG*CRALLC Trigger: ACAAAGGAGGGCTCTGCAGCAGCCCAAACCTATCGG...TGAGCGAAAATGATGAATGGACATAATTATGCTAACAGACTGAGCATCTAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR-3UTR GCA 90 bp | AAGAATCCTCCCTTTTGTAATGTTGGCCATACTCTATTCTTTCTCCACTCTTTAATAGGTTTGGGCTGCTaGAGAGCCCTCCTTTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: KNPPFCNVGHTLFFLHSLIGLGC*RALLCV Trigger: AACACAAAGGAGGGCTCTGCAGCAGCCCAAACCTAT...TAAAGAGTGGAGAAAGAATAGAGTATGGCCAACATTACAAAAGGGAGGATTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR-3UTR CCA 90 bp | TCTCCTGCTGTGTTTTCTTCCATCCTCAGTGATGTTATCCTCATGCTGATTCATCTCTCAGCTACTCAATaGGTAACTGATAATTGCTCA | + |
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Preference number: 2 (lower is better) Translates to: SPAVFSSILSDVILMLIHLSATQ*VTDNCS Trigger: TGAGCAATTATCAGTTACCCATTGAGTAGCTGAGAG...ATGAATCAGCATGAGGATAACATCACTGAGGATGGAAGAAAACACAGCAGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR-3UTR TCA 90 bp | ACTTTTCCTGATCTTTCAAAGAATCCTCCCTTTTGTAATGTTGGCCATACTCTAAATAAGTGTCCTGTCTaGGATCCTCATGGTGTACAG | + |
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Preference number: 2 (lower is better) Translates to: TFPDLSKNPPFCNVGHTLNKCPV*DPHGVQ Trigger: CTGTACACCATGAGGATCTCAGACAGGACACTTATT...TAGAGTATGGCCAACATTACAAAAGGGAGGATTCTTTGAAAGATCAGGAAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR CAA 90 bp | TCTTTTACTTACAGAGCAATGGCACAGGATCGTTTGCCACCTAAATaGGTAATATCGAAACTGTGTTTGATTGTAGTAGCTTACTTGGTA | + |
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Preference number: 2 (lower is better) Translates to: SFTYRAMAQDRLPPK*VISKLCLIVVAYLV Trigger: TACCAAGTAAGCTACTACAATCAAACACAGTTTCGATATTACCAATTTAGGTGGCAAACGATCCTGTGCCATTGCTCTGTAAGTAAAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR GCA 72 bp | TTTGGGAGCCTCACTCTCCGCTCCTCCTCACAGCTGTaGTGTGTGCATGTGGGGATTGCCCTGATGCTGACA | + |
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Preference number: 3 (lower is better) Translates to: FGSLTLRSSSQL*CVHVGIALMLT Trigger: TGTCAGCATCAGGGCAATCCCCACATGCACACAGCACAGCTGTGAGGAGGAGCGGAGAGTGAGGCTCCCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR CCA 72 bp | TCCACCCAGCGTATGGATCTGTCCCAGAGATGTGGTTaGTTGGACTGGGAGATGAGGAGGAAGTGGTGTTAT | + |
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Preference number: 3 (lower is better) Translates to: STQRMDLSQRCG*LDWEMRRKWCY Trigger: ATAACACCACTTCCTCCTCATCTCCCAGTCCAACCAACCACATCTCTGGGACAGATCCATACGCTGGGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR-3UTR CAA 90 bp | TGGGAGCTGCCTCGCCTGAAAAGAATTCTCCTGCTGTGTTTTCTTCCATCCTCACAGAGATGTGGTTGGTaGGACTGGGAGATGAGGAGG | + |
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Preference number: 3 (lower is better) Translates to: WELPRLKRILLLCFLPSSQRCGW*DWEMRR Trigger: CCTCCTCATCTCCCAGTCCAACCAACCACATCTCTG...TGAGGATGGAAGAAAACACAGCAGGAGAATTCTTTTCAGGCGAGGCAGCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR TCA 72 bp | TGGCCTTCCACCTGTCTACTGATAGAACGAACATTTTaGACCCAGGATCTAGTGAGCCACACACAGCCTGCC | + |
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Preference number: 3 (lower is better) Translates to: WPSTCLLIERTF*TQDLVSHTQPA Trigger: GGCAGGCTGTGTGTGGCTCACTAGATCCTGGGTTCAAAATGTTCGTTCTATCAGTAGACAGGTGGAAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR CCA 72 bp | CGTATGGATCTGTCCCAGAGATGTGGTTGGTTGGACTaGGAGATGAGGAGGAAGTGGTGTTATGACGTCGTT | + |
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Preference number: 3 (lower is better) Translates to: RMDLSQRCGWLD*EMRRKWCYDVV Trigger: AACGACGTCATAACACCACTTCCTCCTCATCTCCCAGTCCAACCAACCACATCTCTGGGACAGATCCATACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR CCA 72 bp | AAAGAGGAGCTCACTGGGAAAGTGAGCCCAGGGAGATaGATACATTGTAGAACAGTTTCCAACACTTGGTGC | + |
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Preference number: 3 (lower is better) Translates to: KEELTGKVSPGR*IHCRTVSNTWC Trigger: GCACCAAGTGTTGGAAACTGTTCTACAATGTATCCATCTCCCTGGGCTCACTTTCCCAGTGAGCTCCTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR TCA 72 bp | GAGTGGCTGTGTAGCCTGGGGATTAATTCCAGGAGATaGACACTGCTAAAACATCTTTGCTCAGCTACATGC | + |
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Preference number: 3 (lower is better) Translates to: EWLCSLGINSRR*TLLKHLCSATC Trigger: GCATGTAGCTGAGCAAAGATGTTTTAGCAGTGTTCATCTCCTGGAATTAATCCCCAGGCTACACAGCCACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157065.2 |
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| 3UTR-3UTR CAA 90 bp | TCTCCTGCTGTGTTTTCTTCCATCCTCAGTGATGTTATCCTCATGCTGATTCATTGTCTTCCCTTGGATTaGGGAAGTGTACCCCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: SPAVFSSILSDVILMLIHCLPLD*GSVPQK Trigger: CTTCTGGGGTACACTTCCCAAATCCAAGGGAAGACA...ATGAATCAGCATGAGGATAACATCACTGAGGATGGAAGAAAACACAGCAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR TCA 72 bp | AATATAATCTCTTTTAAACCTGGGAGCTGCCTCGCCTaGAAAGAATTCTCCTGCTGTGTTTTCTTCCATCCT | + |
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Preference number: 3 (lower is better) Translates to: NIISFKPGSCLA*KEFSCCVFFHP Trigger: AGGATGGAAGAAAACACAGCAGGAGAATTCTTTTCAGGCGAGGCAGCTCCCAGGTTTAAAAGAGATTATATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR CCA 72 bp | ATTGGAAAACAAAACAGGACAATAGGCCTTCTAGGATaGCCTTCCACCTGTCTACTGATAGAACGAACATTT | + |
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Preference number: 3 (lower is better) Translates to: IGKQNRTIGLLG*PSTCLLIERTF Trigger: AAATGTTCGTTCTATCAGTAGACAGGTGGAAGGCCATCCTAGAAGGCCTATTGTCCTGTTTTGTTTTCCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR-3UTR CAA 90 bp | TCTCCTGCTGTGTTTTCTTCCATCCTCAGTGATGTTATCCTCATGCTGATTCATAACAGTTTCCAACACTaGGTGCTTAAGAAAGCACTT | + |
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Preference number: 3 (lower is better) Translates to: SPAVFSSILSDVILMLIHNSFQH*VLKKAL Trigger: AAGTGCTTTCTTAAGCACCAAGTGTTGGAAACTGTT...ATGAATCAGCATGAGGATAACATCACTGAGGATGGAAGAAAACACAGCAGGAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR-3UTR CAA 90 bp | AAGAATCCTCCCTTTTGTAATGTTGGCCATACTCTATTCTTTCTCCACTCTTTAAGCCCTCCTTTGTGTTaGGCCGTTTTCCAATCCTAT | + |
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Preference number: 3 (lower is better) Translates to: KNPPFCNVGHTLFFLHSLSPPLC*AVFQSY Trigger: ATAGGATTGGAAAACGGCCAAACACAAAGGAGGGCT...TAAAGAGTGGAGAAAGAATAGAGTATGGCCAACATTACAAAAGGGAGGATTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR TCA 72 bp | AGCTGGTACTGTCAGATGGCTCTCACTGAGTATCTTTaGTTGGATATTCCTAAGGGAGTGAATATAATCTCT | + |
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Preference number: 3 (lower is better) Translates to: SWYCQMALTEYL*LDIPKGVNIIS Trigger: AGAGATTATATTCACTCCCTTAGGAATATCCAATCAAAGATACTCAGTGAGAGCCATCTGACAGTACCAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR-3UTR CAA 90 bp | ATTCTAGATGCTCAGTCTGTTAGCATAATTATGTCCATTCATCATTTTCGCTCAATGGCACAGGATCGTTaGCCACCTAAATTGGTAATA | + |
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Preference number: 3 (lower is better) Translates to: ILDAQSVSIIMSIHHFRSMAQDR*PPKLVI Trigger: TATTACCAATTTAGGTGGCAAACGATCCTGTGCCAT...TGAGCGAAAATGATGAATGGACATAATTATGCTAACAGACTGAGCATCTAGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR-3UTR CAA 90 bp | GATGCCATTCTAGATGCTCAGTCTGTTAGCATAATTATGTCCATTCATCATTTTCTCCCTTTTGTAATGTaGGCCATACTCTATTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: DAILDAQSVSIIMSIHHFLPFVM*AILYSF Trigger: GAAAGAATAGAGTATGGCCAACATTACAAAAGGGAG...AAAATGATGAATGGACATAATTATGCTAACAGACTGAGCATCTAGAATGGCATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR GCA 72 bp | GGGAACCTCTCAGCTACTCAATGGGTAACTGATAATTaGTCATCAAGTTGTAATGTTTTAAGATTAAAACTC | + |
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Preference number: 3 (lower is better) Translates to: GNLSATQWVTDN*SSSCNVLRLKL Trigger: GAGTTTTAATCTTAAAACATTACAACTTGATGAGCAATTATCAGTTACCCATTGAGTAGCTGAGAGGTTCCC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR TCA 90 bp | GAAGAGACTGTCTTCCCTTGGATTTGGGAAGTGTACCCCAGAAGGGAGGGCCTCCTAGGCCCAGGGCATTaGCCCCATTCACAGATCCAG | + |
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Preference number: 4 (lower is better) Translates to: EETVFPWIWEVYPRREGLLGPGH*PHSQIQ Trigger: CTGGATCTGTGAATGGGGTCAATGCCCTGGGCCTAG...GAGGCCCTCCCTTCTGGGGTACACTTCCCAAATCCAAGGGAAGACAGTCTCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR TCA 90 bp | CTCCTAGGCCCTTTCCTTGACCCAGCCCTCTTGATGAGGCTTCCAAGAAGGCTCTCCTTGGTGAGGCTCTaGACTTTCTTCTTGGCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LLGPFLDPALLMRLPRRLSLVRL*TFFLAR Trigger: TCTGGCCAAGAAGAAAGTTCAGAGCCTCACCAAGGA...GAGCCTTCTTGGAAGCCTCATCAAGAGGGCTGGGTCAAGGAAAGGGCCTAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157065.2 |
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| CDS-3UTR GCA 90 bp | GAAGAGACTGTCTTCCCTTGGATTTGGGAAGTGTACCCCAGAAGGGAGGGCCTCATCCAGGAAGGCATCTaGTGCAGTGACCTGCACGAT | + |
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Preference number: 4 (lower is better) Translates to: EETVFPWIWEVYPRREGLIQEGI*CSDLHD Trigger: ATCGTGCAGGTCACTGCAGCAGATGCCTTCCTGGAT...GAGGCCCTCCCTTCTGGGGTACACTTCCCAAATCCAAGGGAAGACAGTCTCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR CCA 90 bp | GAAGAGACTGTCTTCCCTTGGATTTGGGAAGTGTACCCCAGAAGGGAGGGCCTCCTGTCACGGTGTACATaGCAAGCTGTCCCCCAATCA | + |
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Preference number: 4 (lower is better) Translates to: EETVFPWIWEVYPRREGLLSRCT*QAVPQS Trigger: TGATTGGGGGACAGCTTGCCATGTACACCGTGACAG...GAGGCCCTCCCTTCTGGGGTACACTTCCCAAATCCAAGGGAAGACAGTCTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR CCA 90 bp | TGGGAGCTGCCTCGCCTGAAAAGAATTCTCCTGCTGTGTTTTCTTCCATCCTCAAGTCACCCAGTACGTTaGTGGTGGTTCGGAGGCGGT | + |
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Preference number: 4 (lower is better) Translates to: WELPRLKRILLLCFLPSSSHPVR*WWFGGG Trigger: ACCGCCTCCGAACCACCACCAACGTACTGGGTGACT...TGAGGATGGAAGAAAACACAGCAGGAGAATTCTTTTCAGGCGAGGCAGCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR CAA 72 bp | ACCCAGCGTATGGATCTGTCCCAGAGATGTGGTTGGTaGGACTGGGAGATGAGGAGGAAGTGGTGTTATGAC | + |
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Preference number: 4 (lower is better) Translates to: TQRMDLSQRCGW*DWEMRRKWCYD Trigger: GTCATAACACCACTTCCTCCTCATCTCCCAGTCCAACCAACCACATCTCTGGGACAGATCCATACGCTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR CAA 72 bp | ATCCACCCAGCGTATGGATCTGTCCCAGAGATGTGGTaGGTTGGACTGGGAGATGAGGAGGAAGTGGTGTTA | + |
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Preference number: 4 (lower is better) Translates to: IHPAYGSVPEMW*VGLGDEEEVVL Trigger: TAACACCACTTCCTCCTCATCTCCCAGTCCAACCAACCACATCTCTGGGACAGATCCATACGCTGGGTGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR TCA 90 bp | ACTGCTAAAACATCTTTGCTCAGCTACATGCTGCTCCTAGGCCCTTTCCTTGACTCTGCAGCATCCTCATaGGAAGCTCCCCAGGGAACG | + |
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Preference number: 4 (lower is better) Translates to: TAKTSLLSYMLLLGPFLDSAASS*EAPQGT Trigger: CGTTCCCTGGGGAGCTTCTCATGAGGATGCTGCAGA...GTCAAGGAAAGGGCCTAGGAGCAGCATGTAGCTGAGCAAAGATGTTTTAGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157065.2 |
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| CDS-3UTR CCA 90 bp | GTGAGCCCAGGGAGATGGATACATTGTAGAACAGTTTCCAACACTTGGTGCTTACACCCAGTACGTTGGTaGTGGTTCGGAGGCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSPGRWIHCRTVSNTWCLHPVRW*WFGGGP Trigger: TGGACCGCCTCCGAACCACCACCAACGTACTGGGTG...TAAGCACCAAGTGTTGGAAACTGTTCTACAATGTATCCATCTCCCTGGGCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR TCA 90 bp | AAGAATCCTCCCTTTTGTAATGTTGGCCATACTCTATTCTTTCTCCACTCTTTAGTGACCAGACCGGCCTaGGGAATCCCGGCTGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KNPPFCNVGHTLFFLHSLVTRPA*GIPAAP Trigger: CGGGGCAGCCGGGATTCCTCAGGCCGGTCTGGTCAC...TAAAGAGTGGAGAAAGAATAGAGTATGGCCAACATTACAAAAGGGAGGATTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR CAA 72 bp | GATAGGTTTGGGCTGCTGCAGAGCCCTCCTTTGTGTTaGGCCGTTTTCCAATCCTATCAGAGTAGGGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DRFGLLQSPPLC*AVFQSYQSREE Trigger: TTCCTCCCTACTCTGATAGGATTGGAAAACGGCCAAACACAAAGGAGGGCTCTGCAGCAGCCCAAACCTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR TCA 90 bp | ATGGCCTTCCACCTGTCTACTGATAGAACGAACATTTTGAACCCAGGATCTAGTTCTGCAGCATCCTCATaGGAAGCTCCCCAGGGAACG | + |
|
Preference number: 4 (lower is better) Translates to: MAFHLSTDRTNILNPGSSSAASS*EAPQGT Trigger: CGTTCCCTGGGGAGCTTCTCATGAGGATGCTGCAGA...ACTAGATCCTGGGTTCAAAATGTTCGTTCTATCAGTAGACAGGTGGAAGGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR TCA 90 bp | TGGGAGCTGCCTCGCCTGAAAAGAATTCTCCTGCTGTGTTTTCTTCCATCCTCATCCTGGGCAATCAGCTaGTACGGCTTCTTCATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: WELPRLKRILLLCFLPSSSWAIS*YGFFIS Trigger: CGAAATGAAGAAGCCGTATCAGCTGATTGCCCAGGA...TGAGGATGGAAGAAAACACAGCAGGAGAATTCTTTTCAGGCGAGGCAGCTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR CCA 90 bp | ATGGGATGCTCAGGATCTCTAGAAATTATCTCTAACTGTAGACTGGGAGATGCCCCAGTACGTTGGTGGTaGTTCGGAGGCGGTCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MGCSGSLEIISNCRLGDAPVRWW*FGGGPE Trigger: TTCTGGACCGCCTCCGAACCACCACCAACGTACTGG...GGCATCTCCCAGTCTACAGTTAGAGATAATTTCTAGAGATCCTGAGCATCCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR CAA 72 bp | ATGGCCTTCCACCTGTCTACTGATAGAACGAACATTTaGAACCCAGGATCTAGTGAGCCACACACAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: MAFHLSTDRTNI*NPGSSEPHTAC Trigger: GCAGGCTGTGTGTGGCTCACTAGATCCTGGGTTCAAAATGTTCGTTCTATCAGTAGACAGGTGGAAGGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR TCA 90 bp | AAACAAAACAGGACAATAGGCCTTCTAGGATGGCCTTCCACCTGTCTACTGATAAGTCTCCATGGCCTCTaGCACGTTGTTGATCACGGC | + |
|
Preference number: 4 (lower is better) Translates to: KQNRTIGLLGWPSTCLLISLHGL*HVVDHG Trigger: GCCGTGATCAACAACGTGTCAGAGGCCATGGAGACT...TATCAGTAGACAGGTGGAAGGCCATCCTAGAAGGCCTATTGTCCTGTTTTGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR CCA 90 bp | TGGGAGCTGCCTCGCCTGAAAAGAATTCTCCTGCTGTGTTTTCTTCCATCCTCATCTGAACTTTCTTCTTaGCCAGAAGTGTCCGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WELPRLKRILLLCFLPSSSELSS*PEVSAC Trigger: GCAAGCGGACACTTCTGGCCAAGAAGAAAGTTCAGA...TGAGGATGGAAGAAAACACAGCAGGAGAATTCTTTTCAGGCGAGGCAGCTCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
||
| CDS-3UTR CCA 90 bp | GTGAGCCCAGGGAGATGGATACATTGTAGAACAGTTTCCAACACTTGGTGCTTACGAAACCGAAGCACATaGAGAAGACAACTAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VSPGRWIHCRTVSNTWCLRNRST*RRQLGP Trigger: TGGGCCTAGTTGTCTTCTCCATGTGCTTCGGTTTCG...TAAGCACCAAGTGTTGGAAACTGTTCTACAATGTATCCATCTCCCTGGGCTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
||
| CDS-3UTR TCA 90 bp | GTGAGCCCAGGGAGATGGATACATTGTAGAACAGTTTCCAACACTTGGTGCTTATGTTCACTTGAGCGATaGAAATGGCAGCCAAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSPGRWIHCRTVSNTWCLCSLER*KWQPKP Trigger: AGGCTTTGGCTGCCATTTTCATCGCTCAAGTGAACA...TAAGCACCAAGTGTTGGAAACTGTTCTACAATGTATCCATCTCCCTGGGCTCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
||
| CDS-3UTR TCA 90 bp | AACACTGCTAAAACATCTTTGCTCAGCTACATGCTGCTCCTAGGCCCTTTCCTTATGTCCTGGTGGCTCTaGGAACAAGCATTCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NTAKTSLLSYMLLLGPFLMSWWL*EQAFLH Trigger: ATGCAAGAATGCTTGTTCTCAGAGCCACCAGGACAT...AAGGAAAGGGCCTAGGAGCAGCATGTAGCTGAGCAAAGATGTTTTAGCAGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157065.2 |
||
| CDS-3UTR GCA 90 bp | AAACAAAACAGGACAATAGGCCTTCTAGGATGGCCTTCCACCTGTCTACTGATAAACTCTCTCAGCGCTTaGCCCTGCTCCTTCATGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KQNRTIGLLGWPSTCLLINSLSA*PCSFMF Trigger: AAACATGAAGGAGCAGGGGCAAGCGCTGAGAGAGTT...TATCAGTAGACAGGTGGAAGGCCATCCTAGAAGGCCTATTGTCCTGTTTTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
||
| CDS-3UTR GCA 90 bp | ATGGCCTTCCACCTGTCTACTGATAGAACGAACATTTTGAACCCAGGATCTAGTGCTGTGATGAGCGCTTaGAGCAACCCTCCAATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: MAFHLSTDRTNILNPGSSAVMSA*SNPPMK Trigger: TTTCATTGGAGGGTTGCTGCAAGCGCTCATCACAGC...ACTAGATCCTGGGTTCAAAATGTTCGTTCTATCAGTAGACAGGTGGAAGGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR TCA 90 bp | TCTCCTGCTGTGTTTTCTTCCATCCTCAGTGATGTTATCCTCATGCTGATTCATTCCTTGGTGAGGCTCTaGACTTTCTTCTTGGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPAVFSSILSDVILMLIHSLVRL*TFFLAR Trigger: TCTGGCCAAGAAGAAAGTTCAGAGCCTCACCAAGGA...ATGAATCAGCATGAGGATAACATCACTGAGGATGGAAGAAAACACAGCAGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
||
| CDS-3UTR GCA 90 bp | ACTTTTCCTGATCTTTCAAAGAATCCTCCCTTTTGTAATGTTGGCCATACTCTACTCAGCGCTTGCCCCTaGTCCTTCATGTTTCCGATC | + |
|
Preference number: 4 (lower is better) Translates to: TFPDLSKNPPFCNVGHTLLSACP*SFMFPI Trigger: GATCGGAAACATGAAGGAGCAGGGGCAAGCGCTGAG...TAGAGTATGGCCAACATTACAAAAGGGAGGATTCTTTGAAAGATCAGGAAAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR CCA 90 bp | TCAATCATTTTAATTGATCGTAAGTATCTGAGTGGCTGTGTAGCCTGGGGATTATCTGAACTTTCTTCTTaGCCAGAAGTGTCCGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SIILIDRKYLSGCVAWGLSELSS*PEVSAC Trigger: GCAAGCGGACACTTCTGGCCAAGAAGAAAGTTCAGA...TAATCCCCAGGCTACACAGCCACTCAGATACTTACGATCAATTAAAATGATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157065.2 |
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| CDS-3UTR CCA 90 bp | ACTTTTCCTGATCTTTCAAAGAATCCTCCCTTTTGTAATGTTGGCCATACTCTAGTGCCCTTTCCGGGGTaGATGATGATGACAATGATT | + |
|
Preference number: 4 (lower is better) Translates to: TFPDLSKNPPFCNVGHTLVPFPG*MMMTMI Trigger: AATCATTGTCATCATCATCCACCCCGGAAAGGGCAC...TAGAGTATGGCCAACATTACAAAAGGGAGGATTCTTTGAAAGATCAGGAAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| 3UTR CAA 72 bp | TACAGAGCAATGGCACAGGATCGTTTGCCACCTAAATaGGTAATATCGAAACTGTGTTTGATTGTAGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YRAMAQDRLPPK*VISKLCLIVVA Trigger: AGCTACTACAATCAAACACAGTTTCGATATTACCAATTTAGGTGGCAAACGATCCTGTGCCATTGCTCTGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR TCA 90 bp | GATGCCATTCTAGATGCTCAGTCTGTTAGCATAATTATGTCCATTCATCATTTTTCAAAGTTGTTCACTTaGGCGATGAAAATGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DAILDAQSVSIIMSIHHFSKLFT*AMKMAA Trigger: GGCTGCCATTTTCATCGCTCAAGTGAACAACTTTGA...AAAATGATGAATGGACATAATTATGCTAACAGACTGAGCATCTAGAATGGCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
||
| CDS-3UTR CCA 90 bp | ACTTTTCCTGATCTTTCAAAGAATCCTCCCTTTTGTAATGTTGGCCATACTCTAAGTGTTTCGTTGGACTaGATAGGCACTTTAAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TFPDLSKNPPFCNVGHTLSVSLD*IGTLKL Trigger: AAGCTTTAAAGTGCCTATCCAGTCCAACGAAACACT...TAGAGTATGGCCAACATTACAAAAGGGAGGATTCTTTGAAAGATCAGGAAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS TCA 90 bp | GGGCACCATCTCCTCCCGGATCCGGGTCAGAGTCTCCATGGCCTCTaGCACGTTGTTGATCACGGCGCCCAGAAGTGTTTCGTTGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: GHHLLPDPGQSLHGL*HVVDHGAQKCFVGL Trigger: CAGTCCAACGAAACACTTCTGGGCGCCGTGATCAACAACGTGTCAGAGGCCATGGAGACTCTGACCCGGATCCGGGAGGAGATGGTGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
||
| CDS-3UTR CAA 90 bp | CTGCTCCTAGGCCCTTTCCTTGACCCAGCCCTCTTGATGAGGCTTCCAAGAAGGCCGCTTGCGGACCCCTaGCTGCAATCTCTCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: LLLGPFLDPALLMRLPRRPLADP*LQSLHP Trigger: AGGATGGAGAGATTGCAGCAAGGGGTCCGCAAGCGG...CCTTCTTGGAAGCCTCATCAAGAGGGCTGGGTCAAGGAAAGGGCCTAGGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000157065.2 |
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| CDS GCA 90 bp | AGGGTGGCAGAACTTGAGGAGGTCCCAAGGGCTGTGATGAGCGCTTaGAGCAACCCTCCAATGAAAACCCAGGGGTTCTTCCGGGTTACC | + |
|
Preference number: 5 (lower is better) Translates to: RVAELEEVPRAVMSA*SNPPMKTQGFFRVT Trigger: GGTAACCCGGAAGAACCCCTGGGTTTTCATTGGAGGGTTGCTGCAAGCGCTCATCACAGCCCTTGGGACCTCCTCAAGTTCTGCCACCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS GCA 90 bp | ATCTCGGTTCTTCAGTTCATGTCGGGACAAGTGCTCGACAATCCCTaGTCCGAGGGAGTCACCCAGTACGTTGGTGGTGGTTCGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ISVLQFMSGQVLDNP*SEGVTQYVGGGSEA Trigger: CGCCTCCGAACCACCACCAACGTACTGGGTGACTCCCTCGGAGCAGGGATTGTCGAGCACTTGTCCCGACATGAACTGAAGAACCGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR CAA 90 bp | ACTCTAGACCATTTGGGAGCCTCACTCTCCGCTCCTCCTCACAGCTGTGCTGTGGAACTCTCTCAGCGCTaGCCCCTGCTCCTTCATGTT | + |
|
Preference number: 5 (lower is better) Translates to: TLDHLGASLSAPPHSCAVELSQR*PLLLHV Trigger: AACATGAAGGAGCAGGGGCAAGCGCTGAGAGAGTTC...CACAGCACAGCTGTGAGGAGGAGCGGAGAGTGAGGCTCCCAAATGGTCTAGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS TCA 90 bp | CTGTCTGCCACGGGTTTCTCCGGTTCATTGTCCTGGGCAATCAGCTaGTACGGCTTCTTCATTTCGTTCTCCTCAATCACCGAGTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSATGFSGSLSWAIS*YGFFISFSSITEFP Trigger: GGGGAACTCGGTGATTGAGGAGAACGAAATGAAGAAGCCGTATCAGCTGATTGCCCAGGACAATGAACCGGAGAAACCCGTGGCAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS GCA 90 bp | TTCCCCATTTCAACATCTCGGTTCTTCAGTTCATGTCGGGACAAGTaGTCGACAATCCCTGCTCCGAGGGAGTCACCCAGTACGTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FPISTSRFFSSCRDK*STIPAPRESPSTLV Trigger: CACCAACGTACTGGGTGACTCCCTCGGAGCAGGGATTGTCGAGCACTTGTCCCGACATGAACTGAAGAACCGAGATGTTGAAATGGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR CAA 90 bp | ACTCTAGACCATTTGGGAGCCTCACTCTCCGCTCCTCCTCACAGCTGTGCTGTGGTCAAAGTTGTTCACTaGAGCGATGAAAATGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLDHLGASLSAPPHSCAVVKVVH*SDENGS Trigger: GCTGCCATTTTCATCGCTCAAGTGAACAACTTTGAC...CACAGCACAGCTGTGAGGAGGAGCGGAGAGTGAGGCTCCCAAATGGTCTAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR CAA 90 bp | TTCCAGGAGATGAACACTGCTAAAACATCTTTGCTCAGCTACATGCTGCTCCTAGCCAGAAGTGTCCGCTaGCGGACCCCTTGCTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FQEMNTAKTSLLSYMLLLARSVR*RTPCCN Trigger: ATTGCAGCAAGGGGTCCGCAAGCGGACACTTCTGGC...TAGGAGCAGCATGTAGCTGAGCAAAGATGTTTTAGCAGTGTTCATCTCCTGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000157065.2 |
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| CDS GCA 90 bp | CGCATGATGGCTTCGTTAAGAGAATCAAAGAACTCTCTCAGCGCTTaGCCCTGCTCCTTCATGTTTCCGATCACGAAACCGAAGCACATG | + |
|
Preference number: 5 (lower is better) Translates to: RMMASLRESKNSLSA*PCSFMFPITKPKHM Trigger: CATGTGCTTCGGTTTCGTGATCGGAAACATGAAGGAGCAGGGGCAAGCGCTGAGAGAGTTCTTTGATTCTCTTAACGAAGCCATCATGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR CAA 90 bp | TCTCCTGCTGTGTTTTCTTCCATCCTCAGTGATGTTATCCTCATGCTGATTCATCCGCTTGCGGACCCCTaGCTGCAATCTCTCCATCCT | + |
|
Preference number: 5 (lower is better) Translates to: SPAVFSSILSDVILMLIHPLADP*LQSLHP Trigger: AGGATGGAGAGATTGCAGCAAGGGGTCCGCAAGCGG...ATGAATCAGCATGAGGATAACATCACTGAGGATGGAAGAAAACACAGCAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR CAA 90 bp | GTGAGCCCAGGGAGATGGATACATTGTAGAACAGTTTCCAACACTTGGTGCTTAACTAGGCCCAGGGCATaGACCCCATTCACAGATCCA | + |
|
Preference number: 5 (lower is better) Translates to: VSPGRWIHCRTVSNTWCLTRPRA*TPFTDP Trigger: TGGATCTGTGAATGGGGTCAATGCCCTGGGCCTAGT...TAAGCACCAAGTGTTGGAAACTGTTCTACAATGTATCCATCTCCCTGGGCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS GCA 90 bp | ATGGCTTCGTTAAGAGAATCAAAGAACTCTCTCAGCGCTTGCCCCTaGTCCTTCATGTTTCCGATCACGAAACCGAAGCACATGGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: MASLRESKNSLSACP*SFMFPITKPKHMEK Trigger: CTTCTCCATGTGCTTCGGTTTCGTGATCGGAAACATGAAGGAGCAGGGGCAAGCGCTGAGAGAGTTCTTTGATTCTCTTAACGAAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR CAA 90 bp | AAGAATCCTCCCTTTTGTAATGTTGGCCATACTCTATTCTTTCTCCACTCTTTAGCCAGAAGTGTCCGCTaGCGGACCCCTTGCTGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: KNPPFCNVGHTLFFLHSLARSVR*RTPCCN Trigger: ATTGCAGCAAGGGGTCCGCAAGCGGACACTTCTGGC...TAAAGAGTGGAGAAAGAATAGAGTATGGCCAACATTACAAAAGGGAGGATTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR CAA 90 bp | ATGGCCTTCCACCTGTCTACTGATAGAACGAACATTTTGAACCCAGGATCTAGTTTCTCTTCCAGGCACTaGAAAGTGATGGGTAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: MAFHLSTDRTNILNPGSSFSSRH*KVMGRV Trigger: CACCCTACCCATCACTTTCAAGTGCCTGGAAGAGAA...ACTAGATCCTGGGTTCAAAATGTTCGTTCTATCAGTAGACAGGTGGAAGGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS-3UTR CAA 90 bp | ATTCTAGATGCTCAGTCTGTTAGCATAATTATGTCCATTCATCATTTTCGCTCATGTACATGTTTTCCTTaGTGCCCTTTCCGGGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ILDAQSVSIIMSIHHFRSCTCFP*CPFRGG Trigger: TCCACCCCGGAAAGGGCACAAAGGAAAACATGTACA...TGAGCGAAAATGATGAATGGACATAATTATGCTAACAGACTGAGCATCTAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS CCA 72 bp | CGACAATCCCTGCTCCGAGGGAGTCACCCAGTACGTTaGTGGTGGTTCGGAGGCGGTCCAGAAACCAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RQSLLRGSHPVR*WWFGGGPETSP Trigger: TGGACTGGTTTCTGGACCGCCTCCGAACCACCACCAACGTACTGGGTGACTCCCTCGGAGCAGGGATTGTCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS TCA 72 bp | CTCCTCCCGGATCCGGGTCAGAGTCTCCATGGCCTCTaGCACGTTGTTGATCACGGCGCCCAGAAGTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LLPDPGQSLHGL*HVVDHGAQKCF Trigger: GAAACACTTCTGGGCGCCGTGATCAACAACGTGTCAGAGGCCATGGAGACTCTGACCCGGATCCGGGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS CAA 90 bp | TCCTCCCGGATCCGGGTCAGAGTCTCCATGGCCTCTGACACGTTGTaGATCACGGCGCCCAGAAGTGTTTCGTTGGACTGGATAGGCACT | + |
|
Preference number: 6 (lower is better) Translates to: SSRIRVRVSMASDTL*ITAPRSVSLDWIGT Trigger: AGTGCCTATCCAGTCCAACGAAACACTTCTGGGCGCCGTGATCAACAACGTGTCAGAGGCCATGGAGACTCTGACCCGGATCCGGGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
||
| CDS CAA 90 bp | ATCTCCTCCCGGATCCGGGTCAGAGTCTCCATGGCCTCTGACACGTaGTTGATCACGGCGCCCAGAAGTGTTTCGTTGGACTGGATAGGC | + |
|
Preference number: 6 (lower is better) Translates to: ISSRIRVRVSMASDT*LITAPRSVSLDWIG Trigger: GCCTATCCAGTCCAACGAAACACTTCTGGGCGCCGTGATCAACAACGTGTCAGAGGCCATGGAGACTCTGACCCGGATCCGGGAGGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS GCA 72 bp | GGCTCTGAACTTTCTTCTTGGCCAGAAGTGTCCGCTTaGGGACCCCTTGCTGCAATCTCTCCATCCTGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GSELSSWPEVSA*GPLAAISPSCP Trigger: GGGGCAGGATGGAGAGATTGCAGCAAGGGGTCCGCAAGCGGACACTTCTGGCCAAGAAGAAAGTTCAGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005493.14 ENSMUST00000157065.2 |
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| CDS CAA 72 bp | CGGATCCGGGTCAGAGTCTCCATGGCCTCTGACACGTaGTTGATCACGGCGCCCAGAAGTGTTTCGTTGGAC | + |
|
Preference number: 6 (lower is better) Translates to: RIRVRVSMASDT*LITAPRSVSLD Trigger: GTCCAACGAAACACTTCTGGGCGCCGTGATCAACAACGTGTCAGAGGCCATGGAGACTCTGACCCGGATCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
||
| CDS TCA 72 bp | TCCGGGTCAGAGTCTCCATGGCCTCTGACACGTTGTTaGTCACGGCGCCCAGAAGTGTTTCGTTGGACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: SGSESPWPLTRC*SRRPEVFRWTG Trigger: TCCAGTCCAACGAAACACTTCTGGGCGCCGTGATCAACAACGTGTCAGAGGCCATGGAGACTCTGACCCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
||
| CDS CAA 72 bp | ATCCGGGTCAGAGTCTCCATGGCCTCTGACACGTTGTaGATCACGGCGCCCAGAAGTGTTTCGTTGGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: IRVRVSMASDTL*ITAPRSVSLDW Trigger: CCAGTCCAACGAAACACTTCTGGGCGCCGTGATCAACAACGTGTCAGAGGCCATGGAGACTCTGACCCGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
||
| CDS GCA 72 bp | GAACTTGAGGAGGTCCCAAGGGCTGTGATGAGCGCTTaGAGCAACCCTCCAATGAAAACCCAGGGGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ELEEVPRAVMSA*SNPPMKTQGFF Trigger: GAAGAACCCCTGGGTTTTCATTGGAGGGTTGCTGCAAGCGCTCATCACAGCCCTTGGGACCTCCTCAAGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
||
| CDS GCA 72 bp | TCAACATCTCGGTTCTTCAGTTCATGTCGGGACAAGTaGTCGACAATCCCTGCTCCGAGGGAGTCACCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: STSRFFSSCRDK*STIPAPRESPS Trigger: ACTGGGTGACTCCCTCGGAGCAGGGATTGTCGAGCACTTGTCCCGACATGAACTGAAGAACCGAGATGTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
||
| CDS GCA 72 bp | CCATCTCAACAATCTTCCCTGCGATCAAGAAGAGGATaGCCAGAGGCGCATACCACATTATCACCGCGACCA | + |
|
Preference number: 6 (lower is better) Translates to: PSQQSSLRSRRG*PEAHTTLSPRP Trigger: TGGTCGCGGTGATAATGTGGTATGCGCCTCTGGGCATCCTCTTCTTGATCGCAGGGAAGATTGTTGAGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS TCA 72 bp | ACGGGTTTCTCCGGTTCATTGTCCTGGGCAATCAGCTaGTACGGCTTCTTCATTTCGTTCTCCTCAATCACC | + |
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Preference number: 6 (lower is better) Translates to: TGFSGSLSWAIS*YGFFISFSSIT Trigger: GGTGATTGAGGAGAACGAAATGAAGAAGCCGTATCAGCTGATTGCCCAGGACAATGAACCGGAGAAACCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS GCA 72 bp | GCTTCGTTAAGAGAATCAAAGAACTCTCTCAGCGCTTaGCCCTGCTCCTTCATGTTTCCGATCACGAAACCG | + |
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Preference number: 6 (lower is better) Translates to: ASLRESKNSLSA*PCSFMFPITKP Trigger: CGGTTTCGTGATCGGAAACATGAAGGAGCAGGGGCAAGCGCTGAGAGAGTTCTTTGATTCTCTTAACGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS CAA 72 bp | GGCTTCGTTAAGAGAATCAAAGAACTCTCTCAGCGCTaGCCCCTGCTCCTTCATGTTTCCGATCACGAAACC | + |
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Preference number: 6 (lower is better) Translates to: GFVKRIKELSQR*PLLLHVSDHET Trigger: GGTTTCGTGATCGGAAACATGAAGGAGCAGGGGCAAGCGCTGAGAGAGTTCTTTGATTCTCTTAACGAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS CAA 90 bp | TCGCATGATGGCTTCGTTAAGAGAATCAAAGAACTCTCTCAGCGCTaGCCCCTGCTCCTTCATGTTTCCGATCACGAAACCGAAGCACAT | + |
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Preference number: 6 (lower is better) Translates to: SHDGFVKRIKELSQR*PLLLHVSDHETEAH Trigger: ATGTGCTTCGGTTTCGTGATCGGAAACATGAAGGAGCAGGGGCAAGCGCTGAGAGAGTTCTTTGATTCTCTTAACGAAGCCATCATGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS GCA 72 bp | TTAAGAGAATCAAAGAACTCTCTCAGCGCTTGCCCCTaGTCCTTCATGTTTCCGATCACGAAACCGAAGCAC | + |
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Preference number: 6 (lower is better) Translates to: LRESKNSLSACP*SFMFPITKPKH Trigger: GTGCTTCGGTTTCGTGATCGGAAACATGAAGGAGCAGGGGCAAGCGCTGAGAGAGTTCTTTGATTCTCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS CAA 72 bp | GACACGTTGTTGATCACGGCGCCCAGAAGTGTTTCGTaGGACTGGATAGGCACTTTAAAGCTTCTTTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: DTLLITAPRSVS*DWIGTLKLLFS Trigger: CGAGAAAAGAAGCTTTAAAGTGCCTATCCAGTCCAACGAAACACTTCTGGGCGCCGTGATCAACAACGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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| CDS GCA 72 bp | CTGATCAAATCCAGGAAGGCATCTGCTGCAGTGACCTaGACGATTTTACCTTCTCTGTACATGTTTTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: LIKSRKASAAVT*TILPSLYMFSF Trigger: AAAGGAAAACATGTACAGAGAAGGTAAAATCGTGCAGGTCACTGCAGCAGATGCCTTCCTGGATTTGATCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005493.14 |
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