Pregenerated sensors for SLC1A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024935Ensembl transcript IDs: ENSMUST00000025875.5
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCATaGTCGCAGGGAGCCTCCCCCTCCCGGGAGCCTGACCCTAGATGT | + |
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Preference number: 1 (lower is better) Translates to: STSCLYSAFVNVLIP*SQGASPSREPDPRC Trigger: ACATCTAGGGTCAGGCTCCCGGGAGGGGGAGGCTCCCTGCGAGCATGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR TCA 90 bp | GAATACAGATATTTGTACTTCAAAGTTCGGAGTCAAGGGTCACCGTaGCGGTCAGTCGGTAGCTTTCAGGTGGGCGTGGCCAACTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: EYRYLYFKVRSQGSP*RSVGSFQVGVANSE Trigger: CTCAGAGTTGGCCACGCCCACCTGAAAGCTACCGACTGACCGTCACGGTGACCCTTGACTCCGAACTTTGAAGTACAAATATCTGTATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR TCA 90 bp | ATTCCCAGAACAATCCTCTCCAGGGAAGGACTGAAGTATTGTCCCTaGACCGCTGGTACCAGTCGCTTATGGCCTGGCTTTTCTTCTGTA | + |
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Preference number: 1 (lower is better) Translates to: IPRTILSREGLKYCP*TAGTSRLWPGFSSV Trigger: TACAGAAGAAAAGCCAGGCCATAAGCGACTGGTACCAGCGGTTCAGGGACAATACTTCAGTCCTTCCCTGGAGAGGATTGTTCTGGGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR GCA 90 bp | GCTTTCAGGTGGGCGTGGCCAACTCTGAGCATTCGGTTACCTTCCTaGTATCTTTGGCACGATTTCTGGCTTCTTAAATATAAAAGCACG | + |
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Preference number: 1 (lower is better) Translates to: AFRWAWPTLSIRLPS*YLWHDFWLLKYKST Trigger: CGTGCTTTTATATTTAAGAAGCCAGAAATCGTGCCAAAGATAGCAGGAAGGTAACCGAATGCTCAGAGTTGGCCACGCCCACCTGAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR CCA 90 bp | AACAATCCTCTCCAGGGAAGGACTGAAGTATTGTCCCTGAACCGCTaGTACCAGTCGCTTATGGCCTGGCTTTTCTTCTGTAAAAATACA | + |
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Preference number: 1 (lower is better) Translates to: NNPLQGRTEVLSLNR*YQSLMAWLFFCKNT Trigger: TGTATTTTTACAGAAGAAAAGCCAGGCCATAAGCGACTGGTACCAGCGGTTCAGGGACAATACTTCAGTCCTTCCCTGGAGAGGATTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR TCA 90 bp | GAGTGGGGGAGATGTTTATTGAGAAGGAAGTGGAACATATCATCTTaGGTTAACAGCACAGTGTGTGAAGTGGCTGGTTACAAGATGACC | + |
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Preference number: 1 (lower is better) Translates to: EWGRCLLRRKWNISS*VNSTVCEVAGYKMT Trigger: GGTCATCTTGTAACCAGCCACTTCACACACTGTGCTGTTAACTCAAGATGATATGTTCCACTTCCTTCTCAATAAACATCTCCCCCACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR TCA 90 bp | AAACACTGGTCTATGCATGAGAAACCAATTTCTCTTCCATATCTATaGCCTAATCCTAACAGTTACTACTTCATATACTTCCAAACTCTG | + |
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Preference number: 1 (lower is better) Translates to: KHWSMHEKPISLPYL*PNPNSYYFIYFQTL Trigger: CAGAGTTTGGAAGTATATGAAGTAGTAACTGTTAGGATTAGGTCATAGATATGGAAGAGAAATTGGTTTCTCATGCATAGACCAGTGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR CCA 90 bp | GGCTGGTTACAAGATGACCCCAATGATCTTGTGAACGGCTCTGCCAATTCACTGGTTTGGCCCTGGGGGTaGGGGGCGCAGGCAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: GWLQDDPNDLVNGSANSLVWPWG*GAQAEK Trigger: TTTCTCTGCCTGCGCCCCCCACCCCCAGGGCCAAAC...CAGTGAATTGGCAGAGCCGTTCACAAGATCATTGGGGTCATCTTGTAACCAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGTTACAAGATGACCCCAATGATCTTGTGAACGGCTCTGCCAATTCACTGGCAGTGGCTTGTCACTaGTGGTTTGGCCCTGGGGGT | + |
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Preference number: 2 (lower is better) Translates to: GWLQDDPNDLVNGSANSLAVACH*WFGPGG Trigger: ACCCCCAGGGCCAAACCAGCAGTGACAAGCCACTGC...CAGTGAATTGGCAGAGCCGTTCACAAGATCATTGGGGTCATCTTGTAACCAGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR TCA 90 bp | TGCTATGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCACGCCCCAGGGTAGTTTaGGAGTGGCTGGAGATGAGG | + |
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Preference number: 2 (lower is better) Translates to: CYGSTSCLYSAFVNVLIPRPRVV*EWLEMR Trigger: CCTCATCTCCAGCCACTCTCAAACTACCCTGGGGCG...TGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCATAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGACCCTAGATGTTGTACGTGAATGGCTGTGTCATCTTAGAGTTTCACCAGAGTTTGCTAGGAGATaGCTCCTGTGGAGACGCCCT | + |
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Preference number: 2 (lower is better) Translates to: SLTLDVVREWLCHLRVSPEFARR*LLWRRP Trigger: AGGGCGTCTCCACAGGAGCCATCTCCTAGCAAACTC...TGGTGAAACTCTAAGATGACACAGCCATTCACGTACAACATCTAGGGTCAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR CCA 90 bp | TGCTATGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCAAGGAGATGGCTCCTGTaGAGACGCCCTTCACAATCC | + |
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Preference number: 2 (lower is better) Translates to: CYGSTSCLYSAFVNVLIPRRWLL*RRPSQS Trigger: GGATTGTGAAGGGCGTCTCCACAGGAGCCATCTCCT...TGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCATAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR CCA 90 bp | GGCTGGTTACAAGATGACCCCAATGATCTTGTGAACGGCTCTGCCAATTCACTGGTTTTGAAACAGCAGTaGCTTGTCACTGCTGGTTTG | + |
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Preference number: 2 (lower is better) Translates to: GWLQDDPNDLVNGSANSLVLKQQ*LVTAGL Trigger: CAAACCAGCAGTGACAAGCCACTGCTGTTTCAAAAC...CAGTGAATTGGCAGAGCCGTTCACAAGATCATTGGGGTCATCTTGTAACCAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR TCA 90 bp | AGCCTGACCCTAGATGTTGTACGTGAATGGCTGTGTCATCTTAGAGTTTCACCAAGTAAGCCAGCAACTTaGTTTCTCATCCCAGAGTGC | + |
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Preference number: 2 (lower is better) Translates to: SLTLDVVREWLCHLRVSPSKPAT*FLIPEC Trigger: GCACTCTGGGATGAGAAATCAAGTTGCTGGCTTACT...TGGTGAAACTCTAAGATGACACAGCCATTCACGTACAACATCTAGGGTCAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCATGCTCACACTGGTCTATGCATaGGAAACCAATTTCTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: WEHFLPLQCLCKCTYSMLTLVYA*ETNFSS Trigger: GGAAGAGAAATTGGTTTCTCATGCATAGACCAGTGT...GAGCATGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR TCA 90 bp | GGCTGGTTACAAGATGACCCCAATGATCTTGTGAACGGCTCTGCCAATTCACTGGTTTTATTTACAGGATaGGGACAGAAGTGTAGACTT | + |
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Preference number: 2 (lower is better) Translates to: GWLQDDPNDLVNGSANSLVLFTG*GQKCRL Trigger: AAGTCTACACTTCTGTCCTCATCCTGTAAATAAAAC...CAGTGAATTGGCAGAGCCGTTCACAAGATCATTGGGGTCATCTTGTAACCAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR TCA 90 bp | CGGTTACCTTCCTGCTATCTTTGGCACGATTTCTGGCTTCTTAAATATAAAAGCTCTAAGCCACAAGGCTaGGATTCCCAGAACAATCCT | + |
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Preference number: 2 (lower is better) Translates to: RLPSCYLWHDFWLLKYKSSKPQG*DSQNNP Trigger: AGGATTGTTCTGGGAATCTCAGCCTTGTGGCTTAGA...GCTTTTATATTTAAGAAGCCAGAAATCGTGCCAAAGATAGCAGGAAGGTAACCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCATGCTCCCAAACACTGGTCTATaGATGAGAAACCAATTTCTC | + |
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Preference number: 2 (lower is better) Translates to: WEHFLPLQCLCKCTYSMLPNTGL*MRNQFL Trigger: GAGAAATTGGTTTCTCATGCATAGACCAGTGTTTGG...GAGCATGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR GCA 90 bp | CGGTTACCTTCCTGCTATCTTTGGCACGATTTCTGGCTTCTTAAATATAAAAGCATCGAAGCCTTTTGTTaGTATGGGAGCACTTCCTGC | + |
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Preference number: 2 (lower is better) Translates to: RLPSCYLWHDFWLLKYKSIEAFC*YGSTSC Trigger: GCAGGAAGTGCTCCCATAGCAACAAAAGGCTTCGAT...GCTTTTATATTTAAGAAGCCAGAAATCGTGCCAAAGATAGCAGGAAGGTAACCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR TCA 90 bp | TGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCATGCTCTCTCTTCCATATCTATaGCCTAATCCTAACAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: WEHFLPLQCLCKCTYSMLSLPYL*PNPNSY Trigger: GTAACTGTTAGGATTAGGTCATAGATATGGAAGAGA...GAGCATGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR TCA 90 bp | CGGTTACCTTCCTGCTATCTTTGGCACGATTTCTGGCTTCTTAAATATAAAAGCGAAACACGGCTGTTATaGACCTGTCTCCAAGTTAAG | + |
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Preference number: 2 (lower is better) Translates to: RLPSCYLWHDFWLLKYKSETRLL*TCLQVK Trigger: CTTAACTTGGAGACAGGTTCATAACAGCCGTGTTTC...GCTTTTATATTTAAGAAGCCAGAAATCGTGCCAAAGATAGCAGGAAGGTAACCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR GCA 90 bp | TGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCATGCTCAAGTACAAGGGAAGCTaGGTATTTCACATTGATAGT | + |
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Preference number: 2 (lower is better) Translates to: WEHFLPLQCLCKCTYSMLKYKGS*VFHIDS Trigger: ACTATCAATGTGAAATACGCAGCTTCCCTTGTACTT...GAGCATGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR TCA 90 bp | CGGTTACCTTCCTGCTATCTTTGGCACGATTTCTGGCTTCTTAAATATAAAAGCGAGAGTGGCTGGAGATaGGGTCAAAATGGAAAATTT | + |
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Preference number: 2 (lower is better) Translates to: RLPSCYLWHDFWLLKYKSESGWR*GQNGKF Trigger: AAATTTTCCATTTTGACCTCATCTCCAGCCACTCTC...GCTTTTATATTTAAGAAGCCAGAAATCGTGCCAAAGATAGCAGGAAGGTAACCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR CCA 90 bp | CGGTTACCTTCCTGCTATCTTTGGCACGATTTCTGGCTTCTTAAATATAAAAGCAAAAACCCCAAACACTaGTCTATGCATGAGAAACCA | + |
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Preference number: 2 (lower is better) Translates to: RLPSCYLWHDFWLLKYKSKNPKH*SMHEKP Trigger: TGGTTTCTCATGCATAGACCAGTGTTTGGGGTTTTT...GCTTTTATATTTAAGAAGCCAGAAATCGTGCCAAAGATAGCAGGAAGGTAACCG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR CCA 90 bp | CGGTTACCTTCCTGCTATCTTTGGCACGATTTCTGGCTTCTTAAATATAAAAGCTCAAAATGGAAAATTTaGCACATTAACTGGGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: RLPSCYLWHDFWLLKYKSSKWKI*HINWVG Trigger: CCCTACCCAGTTAATGTGCCAAATTTTCCATTTTGA...GCTTTTATATTTAAGAAGCCAGAAATCGTGCCAAAGATAGCAGGAAGGTAACCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR GCA 72 bp | TGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCATaGTCGCAGGGAGCCTCCCCCTCCCGGGAGCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: CLYSAFVNVLIP*SQGASPSREPD Trigger: GTCAGGCTCCCGGGAGGGGGAGGCTCCCTGCGAGCATGGAATAAGTACATTTACAAAGGCACTGTAGAGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR CCA 72 bp | CCTTCTCGTTCCTTAATGTCGGAGTTTGCTAGGAGATaGCTCCTGTGGAGACGCCCTTCACAATCCCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: PSRSLMSEFARR*LLWRRPSQSQA Trigger: GGCCTGGGATTGTGAAGGGCGTCTCCACAGGAGCCATCTCCTAGCAAACTCCGACATTAAGGAACGAGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR TCA 72 bp | ACAATCCTCTCCAGGGAAGGACTGAAGTATTGTCCCTaGACCGCTGGTACCAGTCGCTTATGGCCTGGCTTT | + |
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Preference number: 3 (lower is better) Translates to: TILSREGLKYCP*TAGTSRLWPGF Trigger: AAAGCCAGGCCATAAGCGACTGGTACCAGCGGTTCAGGGACAATACTTCAGTCCTTCCCTGGAGAGGATTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR CCA 72 bp | CTCCAGGGAAGGACTGAAGTATTGTCCCTGAACCGCTaGTACCAGTCGCTTATGGCCTGGCTTTTCTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: LQGRTEVLSLNR*YQSLMAWLFFC Trigger: ACAGAAGAAAAGCCAGGCCATAAGCGACTGGTACCAGCGGTTCAGGGACAATACTTCAGTCCTTCCCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGTTACAAGATGACCCCAATGATCTTGTGAACGGCTCTGCCAATTCACTGGATCGAAGCCTTTTGTaGCTATGGGAGCACTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: GWLQDDPNDLVNGSANSLDRSLL*LWEHFL Trigger: CAGGAAGTGCTCCCATAGCAACAAAAGGCTTCGATC...CAGTGAATTGGCAGAGCCGTTCACAAGATCATTGGGGTCATCTTGTAACCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR CCA 72 bp | GTGCCTGACAGTGTTCTGGTGAGCTCACACCTAGGCTaGAGCTATCGTTTTGATTCAAGTACAAGGGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: VPDSVLVSSHLG*SYRFDSSTREA Trigger: AGCTTCCCTTGTACTTGAATCAAAACGATAGCTCCAGCCTAGGTGTGAGCTCACCAGAACACTGTCAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR CAA 90 bp | CGGTTACCTTCCTGCTATCTTTGGCACGATTTCTGGCTTCTTAAATATAAAAGCCCGCCCCAGGGTAGTTaGAGAGTGGCTGGAGATGAG | + |
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Preference number: 3 (lower is better) Translates to: RLPSCYLWHDFWLLKYKSPPQGS*RVAGDE Trigger: CTCATCTCCAGCCACTCTCAAACTACCCTGGGGCGG...GCTTTTATATTTAAGAAGCCAGAAATCGTGCCAAAGATAGCAGGAAGGTAACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGTTACAAGATGACCCCAATGATCTTGTGAACGGCTCTGCCAATTCACTGGAAGATCGAAGCCTTTaGTTGCTATGGGAGCACTTC | + |
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Preference number: 3 (lower is better) Translates to: GWLQDDPNDLVNGSANSLEDRSL*LLWEHF Trigger: GAAGTGCTCCCATAGCAACAAAAGGCTTCGATCTTC...CAGTGAATTGGCAGAGCCGTTCACAAGATCATTGGGGTCATCTTGTAACCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR GCA 72 bp | CTTTTGTTGCTATGGGAGCACTTCCTGCCTCTACAGTaGCTTTGTAAATGTACTTATTCCATGCTCGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: LLLLWEHFLPLQ*LCKCTYSMLAG Trigger: CCCTGCGAGCATGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCATAGCAACAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR GCA 72 bp | GGTCTTGAAGTCTACTTGAAGATCGAAGCCTTTTGTTaGTATGGGAGCACTTCCTGCCTCTACAGTGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: GLEVYLKIEAFC*YGSTSCLYSAF Trigger: AAAGGCACTGTAGAGGCAGGAAGTGCTCCCATAGCAACAAAAGGCTTCGATCTTCAAGTAGACTTCAAGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR GCA 72 bp | TGGGCGTGGCCAACTCTGAGCATTCGGTTACCTTCCTaGTATCTTTGGCACGATTTCTGGCTTCTTAAATAT | + |
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Preference number: 3 (lower is better) Translates to: WAWPTLSIRLPS*YLWHDFWLLKY Trigger: ATATTTAAGAAGCCAGAAATCGTGCCAAAGATAGCAGGAAGGTAACCGAATGCTCAGAGTTGGCCACGCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR-3UTR CAA 90 bp | GGCTGGTTACAAGATGACCCCAATGATCTTGTGAACGGCTCTGCCAATTCACTGAAACTAAATGTACAGTaGACTCTTAGTGTCCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: GWLQDDPNDLVNGSANSLKLNVQ*TLSVLL Trigger: GAGAAGGACACTAAGAGTCAACTGTACATTTAGTTT...CAGTGAATTGGCAGAGCCGTTCACAAGATCATTGGGGTCATCTTGTAACCAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR GCA 72 bp | AAGATCGAAGCCTTTTGTTGCTATGGGAGCACTTCCTaGCTCTACAGTGCCTTTGTAAATGTACTTATTCCA | + |
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Preference number: 3 (lower is better) Translates to: KIEAFCCYGSTS*LYSAFVNVLIP Trigger: TGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCATAGCAACAAAAGGCTTCGATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| 3UTR CCA 72 bp | CCAACTCTGAGCATTCGGTTACCTTCCTGCTATCTTTaGCACGATTTCTGGCTTCTTAAATATAAAAGCACG | + |
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Preference number: 3 (lower is better) Translates to: PTLSIRLPSCYL*HDFWLLKYKST Trigger: CGTGCTTTTATATTTAAGAAGCCAGAAATCGTGCCAAAGATAGCAGGAAGGTAACCGAATGCTCAGAGTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR CCA 90 bp | TGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCATGCTCGTCACCAGGCCAGCCTaGGGCACCCCAGCAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: WEHFLPLQCLCKCTYSMLVTRPA*GTPAAP Trigger: TGGAGCTGCTGGGGTGCCCCAGGCTGGCCTGGTGAC...GAGCATGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR CCA 90 bp | TGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCATGCTCCCACGGCGGCCACGGTaGAGAGCAGCAGCCAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: WEHFLPLQCLCKCTYSMLPRRPR*RAAASD Trigger: ATCACTGGCTGCTGCTCTCCACCGTGGCCGCCGTGG...GAGCATGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR CCA 90 bp | GGCTGGTTACAAGATGACCCCAATGATCTTGTGAACGGCTCTGCCAATTCACTGTCAGCACGATCACCATaGTCACCAGGCCAGCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GWLQDDPNDLVNGSANSLSARSP*SPGQPG Trigger: CCCAGGCTGGCCTGGTGACCATGGTGATCGTGCTGA...CAGTGAATTGGCAGAGCCGTTCACAAGATCATTGGGGTCATCTTGTAACCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR TCA 90 bp | GGCTGGTTACAAGATGACCCCAATGATCTTGTGAACGGCTCTGCCAATTCACTGCAGTGCCGTCCATGTTaGTGGTGGCACCAACAGGCA | + |
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Preference number: 4 (lower is better) Translates to: GWLQDDPNDLVNGSANSLQCRPC*WWHQQA Trigger: TGCCTGTTGGTGCCACCATCAACATGGACGGCACTG...CAGTGAATTGGCAGAGCCGTTCACAAGATCATTGGGGTCATCTTGTAACCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR GCA 90 bp | GGCTGGTTACAAGATGACCCCAATGATCTTGTGAACGGCTCTGCCAATTCACTGGCTGTCAGGAGAGCCTaGGCCATACCCAAGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: GWLQDDPNDLVNGSANSLAVRRA*AIPKAK Trigger: CTTTGCCTTGGGTATGGCGCAGGCTCTCCTGACAGC...CAGTGAATTGGCAGAGCCGTTCACAAGATCATTGGGGTCATCTTGTAACCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR TCA 90 bp | GGCTGGTTACAAGATGACCCCAATGATCTTGTGAACGGCTCTGCCAATTCACTGACTGTGAGGTCTGAGTaGACGAGATGGTGTCAGATT | + |
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Preference number: 4 (lower is better) Translates to: GWLQDDPNDLVNGSANSLTVRSE*TRWCQI Trigger: AATCTGACACCATCTCGTTCACTCAGACCTCACAGT...CAGTGAATTGGCAGAGCCGTTCACAAGATCATTGGGGTCATCTTGTAACCAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR CCA 90 bp | CGGTTACCTTCCTGCTATCTTTGGCACGATTTCTGGCTTCTTAAATATAAAAGCGCCCGCTCAGGACAGTaGCCATGTAAAGGCCCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RLPSCYLWHDFWLLKYKSARSGQ*PCKGPA Trigger: AGCTGGGCCTTTACATGGCCACTGTCCTGAGCGGGC...GCTTTTATATTTAAGAAGCCAGAAATCGTGCCAAAGATAGCAGGAAGGTAACCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR CCA 90 bp | AGCCTGACCCTAGATGTTGTACGTGAATGGCTGTGTCATCTTAGAGTTTCACCACGTTATCGAGGGTTGTaGGTTCCAAGGCAAAGGGGT | + |
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Preference number: 4 (lower is better) Translates to: SLTLDVVREWLCHLRVSPRYRGL*VPRQRG Trigger: ACCCCTTTGCCTTGGAACCCACAACCCTCGATAACG...TGGTGAAACTCTAAGATGACACAGCCATTCACGTACAACATCTAGGGTCAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR TCA 90 bp | CGGTTACCTTCCTGCTATCTTTGGCACGATTTCTGGCTTCTTAAATATAAAAGCGCAGGGGCAGAACTATaGGGGAGTGGATTGCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLPSCYLWHDFWLLKYKSAGAEL*GSGLQA Trigger: GGCTTGCAATCCACTCCCTCATAGTTCTGCCCCTGC...GCTTTTATATTTAAGAAGCCAGAAATCGTGCCAAAGATAGCAGGAAGGTAACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS-3UTR TCA 90 bp | TGCTATGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCAAACTGGACGAGATCATaGGAGCTGTCAGGAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: CYGSTSCLYSAFVNVLIPNWTRS*ELSGEP Trigger: AGGCTCTCCTGACAGCTCTCATGATCTCGTCCAGTT...TGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCATAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR GCA 90 bp | TGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCATGCTCTCCAAGCCATTCAGTTaGGCAATAAACACGGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: WEHFLPLQCLCKCTYSMLSKPFS*AINTAA Trigger: GGCAGCCGTGTTTATTGCGCAACTGAATGGCTTGGA...GAGCATGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS-3UTR TCA 90 bp | TGCTATGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCACCGCGAAGCCCCCATTaGCATAAGACTTCTTGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: CYGSTSCLYSAFVNVLIPPRSPH*HKTSWY Trigger: ATACCAAGAAGTCTTATGTCAATGGGGGCTTCGCGG...TGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCATAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS-3UTR GCA 90 bp | TGCTATGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCAGACGAAACATCCATCTaGTCCAGCTCCTTCTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CYGSTSCLYSAFVNVLIPDETSI*SSSFFE Trigger: CTCGAAGAAGGAGCTGGAGCAGATGGATGTTTCGTC...TGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCATAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR TCA 90 bp | TACAAGGGAAGCTGCGTATTTCACATTGATAGTTCATTACTGATCTCTGTCTTGTCAAGCCCAGGACATTaGTGCCGTCTGAGTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YKGSCVFHIDSSLLISVLSSPGH*CRLSTG Trigger: GCCTGTACTCAGACGGCATCAATGTCCTGGGCTTGA...CAAGACAGAGATCAGTAATGAACTATCAATGTGAAATACGCAGCTTCCCTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS-3UTR TCA 90 bp | TGCTATGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCACGTCACTCAAGGCATTaGAGAAGTCCACCAGAATCT | + |
|
Preference number: 4 (lower is better) Translates to: CYGSTSCLYSAFVNVLIPRHSRH*RSPPES Trigger: AGATTCTGGTGGACTTCTTCAATGCCTTGAGTGACG...TGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCATAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS-3UTR TCA 90 bp | TGCTATGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCATCTTCCGCACAACTATaGAATAGAGCAGGGGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CYGSTSCLYSAFVNVLIPSSAQL*NRAGAE Trigger: TTCTGCCCCTGCTCTATTTCATAGTTGTGCGGAAGA...TGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCATAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS-3UTR GCA 90 bp | TACAAGGGAAGCTGCGTATTTCACATTGATAGTTCATTACTGATCTCTGTCTTGCGCAATAAACACGGCTaGCACAGCTTCGTAGAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: YKGSCVFHIDSSLLISVLRNKHG*HSFVER Trigger: GCGCTCTACGAAGCTGTGGCAGCCGTGTTTATTGCG...CAAGACAGAGATCAGTAATGAACTATCAATGTGAAATACGCAGCTTCCCTTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS-3UTR CCA 90 bp | AGCCTGACCCTAGATGTTGTACGTGAATGGCTGTGTCATCTTAGAGTTTCACCAATCCTCTTGTCTACCTaGTTCTTTTCTTCCGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SLTLDVVREWLCHLRVSPILLST*FFSSAQ Trigger: CTGTGCGGAAGAAAAGAACCAGGTAGACAAGAGGAT...TGGTGAAACTCTAAGATGACACAGCCATTCACGTACAACATCTAGGGTCAGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS-3UTR TCA 90 bp | TACAAGGGAAGCTGCGTATTTCACATTGATAGTTCATTACTGATCTCTGTCTTGCGATCAGCGGCAAAATaGCCAGCTTCAGCATCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YKGSCVFHIDSSLLISVLRSAAK*PASASS Trigger: TGAGGATGCTGAAGCTGGTCATTTTGCCGCTGATCG...CAAGACAGAGATCAGTAATGAACTATCAATGTGAAATACGCAGCTTCCCTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS-3UTR TCA 90 bp | TGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCATGCTCATGTCATTCACTTTCTaGGTGACACCAGGCTTGATA | + |
|
Preference number: 4 (lower is better) Translates to: WEHFLPLQCLCKCTYSMLMSFTF*VTPGLI Trigger: TATCAAGCCTGGTGTCACTCAGAAAGTGAATGACAT...GAGCATGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR TCA 90 bp | TACAAGGGAAGCTGCGTATTTCACATTGATAGTTCATTACTGATCTCTGTCTTGCTCCCATTTTCCCAATaGCAAGGCCAAAGACGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: YKGSCVFHIDSSLLISVLLPFSQ*QGQRRG Trigger: GCCTCGTCTTTGGCCTTGTCATTGGGAAAATGGGAG...CAAGACAGAGATCAGTAATGAACTATCAATGTGAAATACGCAGCTTCCCTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS-3UTR CCA 90 bp | CGGTTACCTTCCTGCTATCTTTGGCACGATTTCTGGCTTCTTAAATATAAAAGCTCTTCCCAGACACATTaGAATCCAGTGCAGCGACAC | + |
|
Preference number: 4 (lower is better) Translates to: RLPSCYLWHDFWLLKYKSSSQTH*NPVQRH Trigger: GTGTCGCTGCACTGGATTCCAATGTGTCTGGGAAGA...GCTTTTATATTTAAGAAGCCAGAAATCGTGCCAAAGATAGCAGGAAGGTAACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR CCA 90 bp | TGCTATGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCATCACCTCTTCCCGCTTaGTTTTGTACTGCTGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CYGSTSCLYSAFVNVLIPSPLPA*FCTAEN Trigger: GTTTTCAGCAGTACAAAACCAAGCGGGAAGAGGTGA...TGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCATAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR GCA 90 bp | AGCCTGACCCTAGATGTTGTACGTGAATGGCTGTGTCATCTTAGAGTTTCACCACAATTAGGAACAAAATaGCAATCGGCATGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: SLTLDVVREWLCHLRVSPQLGTK*QSACST Trigger: TGTGCTACATGCCGATTGGCATTTTGTTCCTAATTG...TGGTGAAACTCTAAGATGACACAGCCATTCACGTACAACATCTAGGGTCAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR CCA 90 bp | CGGTTACCTTCCTGCTATCTTTGGCACGATTTCTGGCTTCTTAAATATAAAAGCTCTGGACGATTTTCATaGTGGCGTCACTCAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLPSCYLWHDFWLLKYKSSGRFS*WRHSRH Trigger: ATGCCTTGAGTGACGCCACCATGAAAATCGTCCAGA...GCTTTTATATTTAAGAAGCCAGAAATCGTGCCAAAGATAGCAGGAAGGTAACCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS-3UTR TCA 90 bp | CGGTTACCTTCCTGCTATCTTTGGCACGATTTCTGGCTTCTTAAATATAAAAGCTTGGTTTTGTACTGCTaGAAACAGGCTTGGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLPSCYLWHDFWLLKYKSLVLYC*KQAWTR Trigger: TCTGGTCCAAGCCTGTTTTCAGCAGTACAAAACCAA...GCTTTTATATTTAAGAAGCCAGAAATCGTGCCAAAGATAGCAGGAAGGTAACCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR TCA 90 bp | TGCTATGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCAAGTCTTCAACTTCTATaGTCTTCCCAGCAATTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CYGSTSCLYSAFVNVLIPSLQLL*SSQQLG Trigger: TCCTAATTGCTGGGAAGATCATAGAAGTTGAAGACT...TGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCATAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS-3UTR TCA 90 bp | CGGTTACCTTCCTGCTATCTTTGGCACGATTTCTGGCTTCTTAAATATAAAAGCAGACTTCTTGGTATCTaGGTCTTCGTTATCGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLPSCYLWHDFWLLKYKSRLLGI*VFVIEG Trigger: ACCCTCGATAACGAAGACTCAGATACCAAGAAGTCT...GCTTTTATATTTAAGAAGCCAGAAATCGTGCCAAAGATAGCAGGAAGGTAACCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS TCA 90 bp | ACAATTCCTAGTACCACGGCGGCCACGGTGGAGAGCAGCAGCCAGTaGTTCCGTAGGAAGCGGCGCCAGTCACATCCCGAGCTCGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TIPSTTAATVESSSQ*FRRKRRQSHPELVG Trigger: GCCCACGAGCTCGGGATGTGACTGGCGCCGCTTCCTACGGAATCACTGGCTGCTGCTCTCCACCGTGGCCGCCGTGGTACTAGGAATTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS CCA 90 bp | GAACCACGACTCCTAAGACAATTCCTAGTACCACGGCGGCCACGGTaGAGAGCAGCAGCCAGTGATTCCGTAGGAAGCGGCGCCAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: EPRLLRQFLVPRRPR*RAAASDSVGSGASH Trigger: GTGACTGGCGCCGCTTCCTACGGAATCACTGGCTGCTGCTCTCCACCGTGGCCGCCGTGGTACTAGGAATTGTCTTAGGAGTCGTGGTTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS GCA 90 bp | AGGGTTGCCGAACTGGACGAGATCATGAGAGCTGTCAGGAGAGCCTaGGCCATACCCAAGGCAAAGCGGAAAGGGTTCTTCCGCACAACT | + |
|
Preference number: 5 (lower is better) Translates to: RVAELDEIMRAVRRA*AIPKAKRKGFFRTT Trigger: AGTTGTGCGGAAGAACCCTTTCCGCTTTGCCTTGGGTATGGCGCAGGCTCTCCTGACAGCTCTCATGATCTCGTCCAGTTCGGCAACCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS GCA 90 bp | GCTCCAATGCTGGCAGCGGTGGCTGTAATGCTGATGGTGACGATCTaGCCAATGCTTAGGTCCAAGCCATTCAGTTGCGCAATAAACACG | + |
|
Preference number: 5 (lower is better) Translates to: APMLAAVAVMLMVTI*PMLRSKPFSCAINT Trigger: CGTGTTTATTGCGCAACTGAATGGCTTGGACCTAAGCATTGGGCAGATCGTCACCATCAGCATTACAGCCACCGCTGCCAGCATTGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS CCA 90 bp | GTGGCACCAACAGGCAGCACAAATCTCGTGATCCTCTTGTCTACCTaGTTCTTTTCTTCCGCACAGCGGAATGTAACTGGCAGGGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VAPTGSTNLVILLST*FFSSAQRNVTGRVA Trigger: GGCAACCCTGCCAGTTACATTCCGCTGTGCGGAAGAAAAGAACCAGGTAGACAAGAGGATCACGAGATTTGTGCTGCCTGTTGGTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS GCA 90 bp | AAGGCAAAGGGGTTCACGATGTTGACTTCAGACGAAACATCCATCTaGTCCAGCTCCTTCTTCGAGAGCTTCTCTACGATGCCCGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KAKGFTMLTSDETSI*SSSFFESFSTMPVP Trigger: TGGGACGGGCATCGTAGAGAAGCTCTCGAAGAAGGAGCTGGAGCAGATGGATGTTTCGTCTGAAGTCAACATCGTGAACCCCTTTGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS TCA 90 bp | CGTTATCGAGGGTTGTGGGTTCCAAGGCAAAGGGGTTCACGATGTTaGCTTCAGACGAAACATCCATCTGCTCCAGCTCCTTCTTCGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RYRGLWVPRQRGSRC*LQTKHPSAPAPSSR Trigger: TCTCGAAGAAGGAGCTGGAGCAGATGGATGTTTCGTCTGAAGTCAACATCGTGAACCCCTTTGCCTTGGAACCCACAACCCTCGATAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR CAA 90 bp | GGCTGGTTACAAGATGACCCCAATGATCTTGTGAACGGCTCTGCCAATTCACTGATCAAGCCCAGGACATaGATGCCGTCTGAGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWLQDDPNDLVNGSANSLIKPRT*MPSEYR Trigger: CCTGTACTCAGACGGCATCAATGTCCTGGGCTTGAT...CAGTGAATTGGCAGAGCCGTTCACAAGATCATTGGGGTCATCTTGTAACCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR CAA 90 bp | GGCTGGTTACAAGATGACCCCAATGATCTTGTGAACGGCTCTGCCAATTCACTGCTTCGTTATCGAGGGTaGTGGGTTCCAAGGCAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GWLQDDPNDLVNGSANSLLRYRG*WVPRQR Trigger: CCTTTGCCTTGGAACCCACAACCCTCGATAACGAAG...CAGTGAATTGGCAGAGCCGTTCACAAGATCATTGGGGTCATCTTGTAACCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS GCA 90 bp | TTCATGGTGGCGTCACTCAAGGCATTGAAGAAGTCCACCAGAATCTaGCCCTTTTCTCCCATTTTCCCAATGACAAGGCCAAAGACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: FMVASLKALKKSTRI*PFSPIFPMTRPKTR Trigger: CCTCGTCTTTGGCCTTGTCATTGGGAAAATGGGAGAAAAGGGGCAGATTCTGGTGGACTTCTTCAATGCCTTGAGTGACGCCACCATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS TCA 90 bp | TTTGTCTACCGCGAAGCCCCCATTGACATAAGACTTCTTGGTATCTaGGTCTTCGTTATCGAGGGTTGTGGGTTCCAAGGCAAAGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: FVYREAPIDIRLLGI*VFVIEGCGFQGKGV Trigger: AACCCCTTTGCCTTGGAACCCACAACCCTCGATAACGAAGACTCAGATACCAAGAAGTCTTATGTCAATGGGGGCTTCGCGGTAGACAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR CAA 90 bp | TGCTATGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCAGAGATGGTGTCAGATTaGTCTACCGCGAAGCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CYGSTSCLYSAFVNVLIPEMVSD*STAKPP Trigger: TGGGGGCTTCGCGGTAGACAAATCTGACACCATCTC...TGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCATAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR CAA 90 bp | AGCCTGACCCTAGATGTTGTACGTGAATGGCTGTGTCATCTTAGAGTTTCACCACTGCTGAAAACAGGCTaGGACCAGATTCTCAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SLTLDVVREWLCHLRVSPLLKTG*DQILRE Trigger: TTCCCTGAGAATCTGGTCCAAGCCTGTTTTCAGCAG...TGGTGAAACTCTAAGATGACACAGCCATTCACGTACAACATCTAGGGTCAGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR CAA 90 bp | TACAAGGGAAGCTGCGTATTTCACATTGATAGTTCATTACTGATCTCTGTCTTGGCAGTGCCGTCCATGTaGATGGTGGCACCAACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: YKGSCVFHIDSSLLISVLAVPSM*MVAPTG Trigger: GCCTGTTGGTGCCACCATCAACATGGACGGCACTGC...CAAGACAGAGATCAGTAATGAACTATCAATGTGAAATACGCAGCTTCCCTTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS TCA 90 bp | CTGACTTCAGGGGTTTTACCCGTCCTGTTGATGTCATTCACTTTCTaGGTGACACCAGGCTTGATACTCACAACTAACACAATACCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTSGVLPVLLMSFTF*VTPGLILTTNTIPR Trigger: CCTAGGTATTGTGTTAGTTGTGAGTATCAAGCCTGGTGTCACTCAGAAAGTGAATGACATCAACAGGACGGGTAAAACCCCTGAAGTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS-3UTR CAA 90 bp | TGCTATGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCATACAGGCCCACGATCTaGTATTCCTTTGTCTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: CYGSTSCLYSAFVNVLIPYRPTI*YSFVLF Trigger: GAACAAGACAAAGGAATACAAGATCGTGGGCCTGTA...TGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCATAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS-3UTR CAA 90 bp | CGGTTACCTTCCTGCTATCTTTGGCACGATTTCTGGCTTCTTAAATATAAAAGCGCGTCACTCAAGGCATaGAAGAAGTCCACCAGAATC | + |
|
Preference number: 5 (lower is better) Translates to: RLPSCYLWHDFWLLKYKSASLKA*KKSTRI Trigger: GATTCTGGTGGACTTCTTCAATGCCTTGAGTGACGC...GCTTTTATATTTAAGAAGCCAGAAATCGTGCCAAAGATAGCAGGAAGGTAACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS-3UTR CAA 90 bp | TACAAGGGAAGCTGCGTATTTCACATTGATAGTTCATTACTGATCTCTGTCTTGGTCCAAGCCATTCAGTaGCGCAATAAACACGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YKGSCVFHIDSSLLISVLVQAIQ*RNKHGC Trigger: GCAGCCGTGTTTATTGCGCAACTGAATGGCTTGGAC...CAAGACAGAGATCAGTAATGAACTATCAATGTGAAATACGCAGCTTCCCTTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS-3UTR CAA 90 bp | TACAAGGGAAGCTGCGTATTTCACATTGATAGTTCATTACTGATCTCTGTCTTGATCTTCCCAGACACATaGGAATCCAGTGCAGCGACA | + |
|
Preference number: 5 (lower is better) Translates to: YKGSCVFHIDSSLLISVLIFPDT*ESSAAT Trigger: TGTCGCTGCACTGGATTCCAATGTGTCTGGGAAGAT...CAAGACAGAGATCAGTAATGAACTATCAATGTGAAATACGCAGCTTCCCTTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS-3UTR CAA 90 bp | TGGGAGCACTTCCTGCCTCTACAGTGCCTTTGTAAATGTACTTATTCCATGCTCCGATCTTGTATTCCTTaGTCTTGTTCTCAGACATTG | + |
|
Preference number: 5 (lower is better) Translates to: WEHFLPLQCLCKCTYSMLRSCIP*SCSQTL Trigger: CAATGTCTGAGAACAAGACAAAGGAATACAAGATCG...GAGCATGGAATAAGTACATTTACAAAGGCACTGTAGAGGCAGGAAGTGCTCCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS CCA 72 bp | CTCCTAAGACAATTCCTAGTACCACGGCGGCCACGGTaGAGAGCAGCAGCCAGTGATTCCGTAGGAAGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLRQFLVPRRPR*RAAASDSVGSG Trigger: GCCGCTTCCTACGGAATCACTGGCTGCTGCTCTCCACCGTGGCCGCCGTGGTACTAGGAATTGTCTTAGGAG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS GCA 72 bp | TCTGCTCCAGCTCCTTCTTCGAGAGCTTCTCTACGATaGCCGTCCCAAACGCATCACCCAGGACGTTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: SAPAPSSRASLR*PSQTHHPGRSP Trigger: TGGTGAACGTCCTGGGTGATGCGTTTGGGACGGGCATCGTAGAGAAGCTCTCGAAGAAGGAGCTGGAGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS GCA 72 bp | GAAATAGAGCAGGGGCAGAACTATGAGGGAGTGGATTaGAAGCCCGCTCAGGACAGTGGCCATGTAAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: EIEQGQNYEGVD*KPAQDSGHVKA Trigger: GGCCTTTACATGGCCACTGTCCTGAGCGGGCTTGCAATCCACTCCCTCATAGTTCTGCCCCTGCTCTATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS GCA 72 bp | GAACTGGACGAGATCATGAGAGCTGTCAGGAGAGCCTaGGCCATACCCAAGGCAAAGCGGAAAGGGTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ELDEIMRAVRRA*AIPKAKRKGFF Trigger: GAAGAACCCTTTCCGCTTTGCCTTGGGTATGGCGCAGGCTCTCCTGACAGCTCTCATGATCTCGTCCAGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS TCA 72 bp | GGGTTGTGGGTTCCAAGGCAAAGGGGTTCACGATGTTaGCTTCAGACGAAACATCCATCTGCTCCAGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GLWVPRQRGSRC*LQTKHPSAPAP Trigger: AGGAGCTGGAGCAGATGGATGTTTCGTCTGAAGTCAACATCGTGAACCCCTTTGCCTTGGAACCCACAACCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
||
| CDS GCA 72 bp | GCGCAGACCAATCTTCCCAGACACATTGGAATCCAGTaGAGCGACACCTGTGATCATGCTGGATACGATCAG | + |
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Preference number: 6 (lower is better) Translates to: AQTNLPRHIGIQ*SDTCDHAGYDQ Trigger: CTGATCGTATCCAGCATGATCACAGGTGTCGCTGCACTGGATTCCAATGTGTCTGGGAAGATTGGTCTGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS CCA 72 bp | TACCTGGTTCTTTTCTTCCGCACAGCGGAATGTAACTaGCAGGGTTGCCGAACTGGACGAGATCATGAGAGC | + |
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Preference number: 6 (lower is better) Translates to: YLVLFFRTAECN*QGCRTGRDHES Trigger: GCTCTCATGATCTCGTCCAGTTCGGCAACCCTGCCAGTTACATTCCGCTGTGCGGAAGAAAAGAACCAGGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS CAA 72 bp | AGGGTTGTGGGTTCCAAGGCAAAGGGGTTCACGATGTaGACTTCAGACGAAACATCCATCTGCTCCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: RVVGSKAKGFTM*TSDETSICSSS Trigger: GGAGCTGGAGCAGATGGATGTTTCGTCTGAAGTCAACATCGTGAACCCCTTTGCCTTGGAACCCACAACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS CAA 90 bp | TCGTTATCGAGGGTTGTGGGTTCCAAGGCAAAGGGGTTCACGATGTaGACTTCAGACGAAACATCCATCTGCTCCAGCTCCTTCTTCGAG | + |
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Preference number: 6 (lower is better) Translates to: SLSRVVGSKAKGFTM*TSDETSICSSSFFE Trigger: CTCGAAGAAGGAGCTGGAGCAGATGGATGTTTCGTCTGAAGTCAACATCGTGAACCCCTTTGCCTTGGAACCCACAACCCTCGATAACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS TCA 72 bp | CGCGAAGCCCCCATTGACATAAGACTTCTTGGTATCTaGGTCTTCGTTATCGAGGGTTGTGGGTTCCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: REAPIDIRLLGI*VFVIEGCGFQG Trigger: GCCTTGGAACCCACAACCCTCGATAACGAAGACTCAGATACCAAGAAGTCTTATGTCAATGGGGGCTTCGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS CAA 72 bp | TATACTACAGCGCGCAGACCAATCTTCCCAGACACATaGGAATCCAGTGCAGCGACACCTGTGATCATGCTG | + |
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Preference number: 6 (lower is better) Translates to: YTTARRPIFPDT*ESSAATPVIML Trigger: CAGCATGATCACAGGTGTCGCTGCACTGGATTCCAATGTGTCTGGGAAGATTGGTCTGCGCGCTGTAGTATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS CAA 72 bp | GTGGCACCAACAGGCAGCACAAATCTCGTGATCCTCTaGTCTACCTGGTTCTTTTCTTCCGCACAGCGGAAT | + |
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Preference number: 6 (lower is better) Translates to: VAPTGSTNLVIL*STWFFSSAQRN Trigger: ATTCCGCTGTGCGGAAGAAAAGAACCAGGTAGACAAGAGGATCACGAGATTTGTGCTGCCTGTTGGTGCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS GCA 72 bp | GGGTTCACGATGTTGACTTCAGACGAAACATCCATCTaGTCCAGCTCCTTCTTCGAGAGCTTCTCTACGATG | + |
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Preference number: 6 (lower is better) Translates to: GFTMLTSDETSI*SSSFFESFSTM Trigger: CATCGTAGAGAAGCTCTCGAAGAAGGAGCTGGAGCAGATGGATGTTTCGTCTGAAGTCAACATCGTGAACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS CCA 72 bp | ACAGGCAGCACAAATCTCGTGATCCTCTTGTCTACCTaGTTCTTTTCTTCCGCACAGCGGAATGTAACTGGC | + |
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Preference number: 6 (lower is better) Translates to: TGSTNLVILLST*FFSSAQRNVTG Trigger: GCCAGTTACATTCCGCTGTGCGGAAGAAAAGAACCAGGTAGACAAGAGGATCACGAGATTTGTGCTGCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS CAA 72 bp | CCAAAGACGAGGCAGAAGATAATCAAGCCCAGGACATaGATGCCGTCTGAGTACAGGCCCACGATCTTGTAT | + |
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Preference number: 6 (lower is better) Translates to: PKTRQKIIKPRT*MPSEYRPTILY Trigger: ATACAAGATCGTGGGCCTGTACTCAGACGGCATCAATGTCCTGGGCTTGATTATCTTCTGCCTCGTCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS CAA 90 bp | ATGACAAGGCCAAAGACGAGGCAGAAGATAATCAAGCCCAGGACATaGATGCCGTCTGAGTACAGGCCCACGATCTTGTATTCCTTTGTC | + |
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Preference number: 6 (lower is better) Translates to: MTRPKTRQKIIKPRT*MPSEYRPTILYSFV Trigger: GACAAAGGAATACAAGATCGTGGGCCTGTACTCAGACGGCATCAATGTCCTGGGCTTGATTATCTTCTGCCTCGTCTTTGGCCTTGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS CAA 90 bp | ATCAAGCCCAGGACATTGATGCCGTCTGAGTACAGGCCCACGATCTaGTATTCCTTTGTCTTGTTCTCAGACATTGTTGTCATGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: IKPRTLMPSEYRPTI*YSFVLFSDIVVMAV Trigger: CACAGCCATGACAACAATGTCTGAGAACAAGACAAAGGAATACAAGATCGTGGGCCTGTACTCAGACGGCATCAATGTCCTGGGCTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS TCA 72 bp | GCAGAAGATAATCAAGCCCAGGACATTGATGCCGTCTaGGTACAGGCCCACGATCTTGTATTCCTTTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: AEDNQAQDIDAV*VQAHDLVFLCL Trigger: AAGACAAAGGAATACAAGATCGTGGGCCTGTACTCAGACGGCATCAATGTCCTGGGCTTGATTATCTTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS TCA 72 bp | GGGGTTTTACCCGTCCTGTTGATGTCATTCACTTTCTaGGTGACACCAGGCTTGATACTCACAACTAACACA | + |
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Preference number: 6 (lower is better) Translates to: GVLPVLLMSFTF*VTPGLILTTNT Trigger: TGTGTTAGTTGTGAGTATCAAGCCTGGTGTCACTCAGAAAGTGAATGACATCAACAGGACGGGTAAAACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS CAA 72 bp | AGGACATTGATGCCGTCTGAGTACAGGCCCACGATCTaGTATTCCTTTGTCTTGTTCTCAGACATTGTTGTC | + |
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Preference number: 6 (lower is better) Translates to: RTLMPSEYRPTI*YSFVLFSDIVV Trigger: GACAACAATGTCTGAGAACAAGACAAAGGAATACAAGATCGTGGGCCTGTACTCAGACGGCATCAATGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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| CDS TCA 72 bp | AGATGGTGTCAGATTTGTCTACCGCGAAGCCCCCATTaGCATAAGACTTCTTGGTATCTGAGTCTTCGTTAT | + |
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Preference number: 6 (lower is better) Translates to: RWCQICLPRSPH*HKTSWYLSLRY Trigger: ATAACGAAGACTCAGATACCAAGAAGTCTTATGTCAATGGGGGCTTCGCGGTAGACAAATCTGACACCATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025875.5 |
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