Pregenerated sensors for SLC19A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038496Ensembl transcript IDs: ENSMUST00000045560.15, ENSMUST00000164473.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAATCTGTACTGATAAAGTGTGCCTGTGCGTGGCAAAGCATGTCTaGCTGCCCATCTTAAAATCCTGCCCATTTGTGACGGGAATTGAT | + |
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Preference number: 1 (lower is better) Translates to: GICTDKVCLCVAKHV*LPILKSCPFVTGID Trigger: ATCAATTCCCGTCACAAATGGGCAGGATTTTAAGATGGGCAGCCAGACATGCTTTGCCACGCACAGGCACACTTTATCAGTACAGATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR CCA 90 bp | ACTAATACAGCTGCCATGGCCATATACGGAGTGCTTGCAGTTAGCTaGGCAGTTAGCCTGAGACTGAAGTTTGGTTGTGGTTTTGGAATC | + |
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Preference number: 1 (lower is better) Translates to: TNTAAMAIYGVLAVS*AVSLRLKFGCGFGI Trigger: GATTCCAAAACCACAACCAAACTTCAGTCTCAGGCTAACTGCCCAGCTAACTGCAAGCACTCCGTATATGGCCATGGCAGCTGTATTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR TCA 90 bp | CTGCTGGAAAGCTGTGGAAGTTCCTTCAGAAGTGTTCTACATCAATaGAACACTTATCTAGGGTCATGGTGGGAAGAGGGGGAATCATCT | + |
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Preference number: 1 (lower is better) Translates to: LLESCGSSFRSVLHQ*NTYLGSWWEEGESS Trigger: AGATGATTCCCCCTCTTCCCACCATGACCCTAGATAAGTGTTTCATTGATGTAGAACACTTCTGAAGGAACTTCCACAGCTTTCCAGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR TCA 90 bp | GAGAGTGATCTGAACACCAGGTTTCATTGTTCTTTACTTCTTGATTaGAGATGCAATGTGTCCAGTAGCTCCTTTATCCTGCAGTCATGT | + |
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Preference number: 1 (lower is better) Translates to: ESDLNTRFHCSLLLD*RCNVSSSSFILQSC Trigger: ACATGACTGCAGGATAAAGGAGCTACTGGACACATTGCATCTTCAATCAAGAAGTAAAGAACAATGAAACCTGGTGTTCAGATCACTCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR TCA 90 bp | CAGTCATGTCTTCCCTCTTGTAATGGAATGTATCCCTTCAAACTGTaGACTAAGATATTAAGTTCCTCCATTGAGTCGCTTCTTGTTAGA | + |
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Preference number: 1 (lower is better) Translates to: QSCLPSCNGMYPFKL*TKILSSSIESLLVR Trigger: TCTAACAAGAAGCGACTCAATGGAGGAACTTAATATCTTAGTTCACAGTTTGAAGGGATACATTCCATTACAAGAGGGAAGACATGACTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR CCA 90 bp | GCGAAACAGGAGGAAAATCATCCCAGGCGCTGCCTTTTTAGATCCACAAAGTACCACCATCCCCTTGGCTaGGGTAGTGCGTTGAATAAA | + |
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Preference number: 2 (lower is better) Translates to: AKQEENHPRRCLFRSTKYHHPLG*GSALNK Trigger: TTTATTCAACGCACTACCCCAGCCAAGGGGATGGTG...GTACTTTGTGGATCTAAAAAGGCAGCGCCTGGGATGATTTTCCTCCTGTTTCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR GCA 90 bp | GCAACAGAAGTACACTTAGCGAAACAGGAGGAAAATCATCCCAGGCGCTGCCTTGTAGCTCCTTTATCCTaGAGTCATGTCTTCCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: ATEVHLAKQEENHPRRCLVAPLS*SHVFPL Trigger: AAGAGGGAAGACATGACTGCAGGATAAAGGAGCTAC...AAGGCAGCGCCTGGGATGATTTTCCTCCTGTTTCGCTAAGTGTACTTCTGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR GCA 90 bp | TTCAGTGTTGAAGAGGAACTCTCAGCAATGGGACCAAACCTAGTCATTCCTTCAGATAAAGTGTGCCTGTaGGTGGCAAAGCATGTCTGG | + |
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Preference number: 2 (lower is better) Translates to: FSVEEELSAMGPNLVIPSDKVCL*VAKHVW Trigger: CCAGACATGCTTTGCCACGCACAGGCACACTTTATC...TGAAGGAATGACTAGGTTTGGTCCCATTGCTGAGAGTTCCTCTTCAACACTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTGTTGAAGAGGAACTCTCAGCAATGGGACCAAACCTAGTCATTCCTTCAGGTGGGAAGATTCACTaGAAATGTGGGCAGCACCAT | + |
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Preference number: 2 (lower is better) Translates to: FSVEEELSAMGPNLVIPSGGKIH*KCGQHH Trigger: ATGGTGCTGCCCACATTTCCAGTGAATCTTCCCACC...TGAAGGAATGACTAGGTTTGGTCCCATTGCTGAGAGTTCCTCTTCAACACTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR GCA 90 bp | TTCCTTCAGAGCACTGGAGGTTGCAACAGAAGTACACTTAGCGAAACAGGAGGACCCATCTTAAAATCCTaGCCATTTGTGACGGGAATT | + |
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Preference number: 2 (lower is better) Translates to: FLQSTGGCNRSTLSETGGPILKS*PFVTGI Trigger: AATTCCCGTCACAAATGGGCAGGATTTTAAGATGGG...TCCTCCTGTTTCGCTAAGTGTACTTCTGTTGCAACCTCCAGTGCTCTGAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR CCA 90 bp | TTCCTTCAGAGCACTGGAGGTTGCAACAGAAGTACACTTAGCGAAACAGGAGGATTAGGTTCACTGAGGTaGGAAGATTCACTGGAAATG | + |
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Preference number: 2 (lower is better) Translates to: FLQSTGGCNRSTLSETGGLGSLR*EDSLEM Trigger: CATTTCCAGTGAATCTTCCCACCTCAGTGAACCTAA...TCCTCCTGTTTCGCTAAGTGTACTTCTGTTGCAACCTCCAGTGCTCTGAAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR CCA 90 bp | TTCAGTGTTGAAGAGGAACTCTCAGCAATGGGACCAAACCTAGTCATTCCTTCACCTGAGACTGAAGTTTaGTTGTGGTTTTGGAATCTG | + |
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Preference number: 2 (lower is better) Translates to: FSVEEELSAMGPNLVIPSPETEV*LWFWNL Trigger: CAGATTCCAAAACCACAACCAAACTTCAGTCTCAGG...TGAAGGAATGACTAGGTTTGGTCCCATTGCTGAGAGTTCCTCTTCAACACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR CCA 90 bp | CTTAACAGAACTAGAATTTCCAAGTTCTTGATATTCATGGGGACCCCAAACAAGCTAATACAGCTGCCATaGCCATATACGGAGTGCTTG | + |
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Preference number: 2 (lower is better) Translates to: LNRTRISKFLIFMGTPNKLIQLP*PYTECL Trigger: CAAGCACTCCGTATATGGCCATGGCAGCTGTATTAG...CTTGTTTGGGGTCCCCATGAATATCAAGAACTTGGAAATTCTAGTTCTGTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR TCA 90 bp | TTCAGTGTTGAAGAGGAACTCTCAGCAATGGGACCAAACCTAGTCATTCCTTCACTCTTTGAATATCTGTaGGGGTATATCTGTATTAGG | + |
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Preference number: 2 (lower is better) Translates to: FSVEEELSAMGPNLVIPSLFEYL*GYICIR Trigger: CCTAATACAGATATACCCTCACAGATATTCAAAGAG...TGAAGGAATGACTAGGTTTGGTCCCATTGCTGAGAGTTCCTCTTCAACACTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR GCA 90 bp | CTTAACAGAACTAGAATTTCCAAGTTCTTGATATTCATGGGGACCCCAAACAAGTGTACTGATAAAGTGTaGCTGTGCGTGGCAAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: LNRTRISKFLIFMGTPNKCTDKV*LCVAKH Trigger: ATGCTTTGCCACGCACAGGCACACTTTATCAGTACA...CTTGTTTGGGGTCCCCATGAATATCAAGAACTTGGAAATTCTAGTTCTGTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGCATTTAAAAATTAAATCCATGGGGCCAAGGATATATCTTAGTGACAGAGCTGCTGGAAAGCTGTaGAAGTTCCTTCAGAAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LWHLKIKSMGPRIYLSDRAAGKL*KFLQKC Trigger: ACACTTCTGAAGGAACTTCCACAGCTTTCCAGCAGC...TCTGTCACTAAGATATATCCTTGGCCCCATGGATTTAATTTTTAAATGCCAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR CCA 90 bp | CTCTGGCATTTAAAAATTAAATCCATGGGGCCAAGGATATATCTTAGTGACAGAATTCCTTCAGAGCACTaGAGGTTGCAACAGAAGTAC | + |
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Preference number: 2 (lower is better) Translates to: LWHLKIKSMGPRIYLSDRIPSEH*RLQQKY Trigger: GTACTTCTGTTGCAACCTCCAGTGCTCTGAAGGAAT...TCTGTCACTAAGATATATCCTTGGCCCCATGGATTTAATTTTTAAATGCCAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGCATTTAAAAATTAAATCCATGGGGCCAAGGATATATCTTAGTGACAGATGGTATTTTCAGTGTTaGAGAGGAACTCTCAGCAAT | + |
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Preference number: 2 (lower is better) Translates to: LWHLKIKSMGPRIYLSDRWYFQC*RGTLSN Trigger: ATTGCTGAGAGTTCCTCTTCAACACTGAAAATACCA...TCTGTCACTAAGATATATCCTTGGCCCCATGGATTTAATTTTTAAATGCCAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGCATTTAAAAATTAAATCCATGGGGCCAAGGATATATCTTAGTGACAGATCTTTACTTCTTGATTaGAGATGCAATGTGTCCAGT | + |
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Preference number: 2 (lower is better) Translates to: LWHLKIKSMGPRIYLSDRSLLLD*RCNVSS Trigger: ACTGGACACATTGCATCTTCAATCAAGAAGTAAAGA...TCTGTCACTAAGATATATCCTTGGCCCCATGGATTTAATTTTTAAATGCCAGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR TCA 90 bp | CTCTGGCATTTAAAAATTAAATCCATGGGGCCAAGGATATATCTTAGTGACAGATATGATCCCTGGATTTaGTCTTTAGCACCAAACATA | + |
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Preference number: 2 (lower is better) Translates to: LWHLKIKSMGPRIYLSDRYDPWI*SLAPNI Trigger: TATGTTTGGTGCTAAAGATCAAATCCAGGGATCATA...TCTGTCACTAAGATATATCCTTGGCCCCATGGATTTAATTTTTAAATGCCAGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR CCA 72 bp | GCTGCCATGGCCATATACGGAGTGCTTGCAGTTAGCTaGGCAGTTAGCCTGAGACTGAAGTTTGGTTGTGGT | + |
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Preference number: 3 (lower is better) Translates to: AAMAIYGVLAVS*AVSLRLKFGCG Trigger: ACCACAACCAAACTTCAGTCTCAGGCTAACTGCCCAGCTAACTGCAAGCACTCCGTATATGGCCATGGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR TCA 72 bp | AGATGGGAGAGCATTCCATGGGCATACAGGAGCGTCTaGGTGATCACACAAAGTCCAGGAGGACACAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: RWESIPWAYRSV*VITQSPGGHRR Trigger: TCTTCTGTGTCCTCCTGGACTTTGTGTGATCACTCAGACGCTCCTGTATGCCCATGGAATGCTCTCCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR CCA 72 bp | ACTGATAAAGTGTGCCTGTGCGTGGCAAAGCATGTCTaGCTGCCCATCTTAAAATCCTGCCCATTTGTGACG | + |
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Preference number: 3 (lower is better) Translates to: TDKVCLCVAKHV*LPILKSCPFVT Trigger: CGTCACAAATGGGCAGGATTTTAAGATGGGCAGCCAGACATGCTTTGCCACGCACAGGCACACTTTATCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR CCA 72 bp | ATTCACTGGAAATGTGGGCAGCACCATCCCCTTGGCTaGGGTAGTGCGTTGAATAAAAAGGAGAGAGTGATC | + |
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Preference number: 3 (lower is better) Translates to: IHWKCGQHHPLG*GSALNKKERVI Trigger: GATCACTCTCTCCTTTTTATTCAACGCACTACCCCAGCCAAGGGGATGGTGCTGCCCACATTTCCAGTGAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR CAA 90 bp | GCGAAACAGGAGGAAAATCATCCCAGGCGCTGCCTTTTTAGATCCACAAAGTACTGTAGGTCAGCTCTGTaGGTATCTGTGCTCACTTGG | + |
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Preference number: 3 (lower is better) Translates to: AKQEENHPRRCLFRSTKYCRSAL*VSVLTW Trigger: CCAAGTGAGCACAGATACCAACAGAGCTGACCTACA...GTACTTTGTGGATCTAAAAAGGCAGCGCCTGGGATGATTTTCCTCCTGTTTCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR GCA 72 bp | TTTGGTTGTGGTTTTGGAATCTGTACTGATAAAGTGTaGCTGTGCGTGGCAAAGCATGTCTGGCTGCCCATC | + |
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Preference number: 3 (lower is better) Translates to: FGCGFGICTDKV*LCVAKHVWLPI Trigger: GATGGGCAGCCAGACATGCTTTGCCACGCACAGGCACACTTTATCAGTACAGATTCCAAAACCACAACCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR CAA 90 bp | CAGAGCACTGGAGGTTGCAACAGAAGTACACTTAGCGAAACAGGAGGAAAATCAGGCTGGGGTAGTGCGTaGAATAAAAAGGAGAGAGTG | + |
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Preference number: 3 (lower is better) Translates to: QSTGGCNRSTLSETGGKSGWGSA*NKKERV Trigger: CACTCTCTCCTTTTTATTCAACGCACTACCCCAGCC...TGATTTTCCTCCTGTTTCGCTAAGTGTACTTCTGTTGCAACCTCCAGTGCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR CAA 90 bp | TTCCTTCAGAGCACTGGAGGTTGCAACAGAAGTACACTTAGCGAAACAGGAGGAGAGACTGAAGTTTGGTaGTGGTTTTGGAATCTGTAC | + |
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Preference number: 3 (lower is better) Translates to: FLQSTGGCNRSTLSETGGETEVW*WFWNLY Trigger: GTACAGATTCCAAAACCACAACCAAACTTCAGTCTC...TCCTCCTGTTTCGCTAAGTGTACTTCTGTTGCAACCTCCAGTGCTCTGAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR TCA 72 bp | AGCTGTGGAAGTTCCTTCAGAAGTGTTCTACATCAATaGAACACTTATCTAGGGTCATGGTGGGAAGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: SCGSSFRSVLHQ*NTYLGSWWEEG Trigger: CCCCTCTTCCCACCATGACCCTAGATAAGTGTTTCATTGATGTAGAACACTTCTGAAGGAACTTCCACAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR GCA 72 bp | ATTGAAGATGCAATGTGTCCAGTAGCTCCTTTATCCTaGAGTCATGTCTTCCCTCTTGTAATGGAATGTATC | + |
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Preference number: 3 (lower is better) Translates to: IEDAMCPVAPLS*SHVFPLVMECI Trigger: GATACATTCCATTACAAGAGGGAAGACATGACTGCAGGATAAAGGAGCTACTGGACACATTGCATCTTCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR TCA 72 bp | CTGAACACCAGGTTTCATTGTTCTTTACTTCTTGATTaGAGATGCAATGTGTCCAGTAGCTCCTTTATCCTG | + |
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Preference number: 3 (lower is better) Translates to: LNTRFHCSLLLD*RCNVSSSSFIL Trigger: CAGGATAAAGGAGCTACTGGACACATTGCATCTTCAATCAAGAAGTAAAGAACAATGAAACCTGGTGTTCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR TCA 72 bp | CTTCCCTCTTGTAATGGAATGTATCCCTTCAAACTGTaGACTAAGATATTAAGTTCCTCCATTGAGTCGCTT | + |
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Preference number: 3 (lower is better) Translates to: LPSCNGMYPFKL*TKILSSSIESL Trigger: AAGCGACTCAATGGAGGAACTTAATATCTTAGTTCACAGTTTGAAGGGATACATTCCATTACAAGAGGGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR TCA 72 bp | TGGGGTAGTGCGTTGAATAAAAAGGAGAGAGTGATCTaGACACCAGGTTTCATTGTTCTTTACTTCTTGATT | + |
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Preference number: 3 (lower is better) Translates to: WGSALNKKERVI*TPGFIVLYFLI Trigger: AATCAAGAAGTAAAGAACAATGAAACCTGGTGTTCAGATCACTCTCTCCTTTTTATTCAACGCACTACCCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR CAA 90 bp | CTCTGGCATTTAAAAATTAAATCCATGGGGCCAAGGATATATCTTAGTGACAGAATGGTATTTTCAGTGTaGAAGAGGAACTCTCAGCAA | + |
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Preference number: 3 (lower is better) Translates to: LWHLKIKSMGPRIYLSDRMVFSV*KRNSQQ Trigger: TTGCTGAGAGTTCCTCTTCAACACTGAAAATACCAT...TCTGTCACTAAGATATATCCTTGGCCCCATGGATTTAATTTTTAAATGCCAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR-3UTR CAA 90 bp | CTCTGGCATTTAAAAATTAAATCCATGGGGCCAAGGATATATCTTAGTGACAGAAGTTTGGTTGTGGTTTaGGAATCTGTACTGATAAAG | + |
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Preference number: 3 (lower is better) Translates to: LWHLKIKSMGPRIYLSDRSLVVV*ESVLIK Trigger: CTTTATCAGTACAGATTCCAAAACCACAACCAAACT...TCTGTCACTAAGATATATCCTTGGCCCCATGGATTTAATTTTTAAATGCCAGAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CCA 90 bp | CTGAGGTGGGAAGATTCACTGGAAATGTGGGCAGCACCATCCCCTTGGCTGGGGAGGGATACCAGGAGCTaGGCTAACACTGAGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LRWEDSLEMWAAPSPWLGRDTRS*ANTEPA Trigger: AGCAGGCTCAGTGTTAGCCCAGCTCCTGGTATCCCT...CCCCAGCCAAGGGGATGGTGCTGCCCACATTTCCAGTGAATCTTCCCACCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR TCA 90 bp | TTCCTTCAGAGCACTGGAGGTTGCAACAGAAGTACACTTAGCGAAACAGGAGGAACAGAGATCCTGCGATaGCAGCTGAGAAGACAGCCA | + |
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Preference number: 4 (lower is better) Translates to: FLQSTGGCNRSTLSETGGTEILR*QLRRQP Trigger: TGGCTGTCTTCTCAGCTGTCATCGCAGGATCTCTGT...TCCTCCTGTTTCGCTAAGTGTACTTCTGTTGCAACCTCCAGTGCTCTGAAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR TCA 90 bp | CAGAGCACTGGAGGTTGCAACAGAAGTACACTTAGCGAAACAGGAGGAAAATCACGAGAAGATCCCAGTTaGCCTTCAGATAGCCCACTG | + |
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Preference number: 4 (lower is better) Translates to: QSTGGCNRSTLSETGGKSREDPS*PSDSPL Trigger: CAGTGGGCTATCTGAAGGTCAACTGGGATCTTCTCG...TGATTTTCCTCCTGTTTCGCTAAGTGTACTTCTGTTGCAACCTCCAGTGCTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR GCA 90 bp | GCGAAACAGGAGGAAAATCATCCCAGGCGCTGCCTTTTTAGATCCACAAAGTACAGCTCCTCCAAATGTTaGTATGGCCTCTACTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: AKQEENHPRRCLFRSTKYSSSKC*YGLYCS Trigger: GGAGCAGTAGAGGCCATAGCAACATTTGGAGGAGCT...GTACTTTGTGGATCTAAAAAGGCAGCGCCTGGGATGATTTTCCTCCTGTTTCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR TCA 90 bp | CTTTACTTCTTGATTGAAGATGCAATGTGTCCAGTAGCTCCTTTATCCTGCAGTTCCTGCGATGACAGCTaGGAAGACAGCCAGACCCAG | + |
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Preference number: 4 (lower is better) Translates to: LYFLIEDAMCPVAPLSCSSCDDS*EDSQTQ Trigger: CTGGGTCTGGCTGTCTTCTCAGCTGTCATCGCAGGA...ACTGCAGGATAAAGGAGCTACTGGACACATTGCATCTTCAATCAAGAAGTAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR TCA 90 bp | GCAACAGAAGTACACTTAGCGAAACAGGAGGAAAATCATCCCAGGCGCTGCCTTAGTTGGAGCCCTCTTTaGTCTACCACAATCATAGTC | + |
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Preference number: 4 (lower is better) Translates to: ATEVHLAKQEENHPRRCLSWSPL*STTIIV Trigger: GACTATGATTGTGGTAGATCAAAGAGGGCTCCAACT...AAGGCAGCGCCTGGGATGATTTTCCTCCTGTTTCGCTAAGTGTACTTCTGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR GCA 90 bp | TTCAGTGTTGAAGAGGAACTCTCAGCAATGGGACCAAACCTAGTCATTCCTTCACACGGGTGGCAGCGTTaGCAGGTAAGAATATGTCCA | + |
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Preference number: 4 (lower is better) Translates to: FSVEEELSAMGPNLVIPSHGWQR*QVRICP Trigger: TGGACATATTCTTACCTGGCAACGCTGCCACCCGTG...TGAAGGAATGACTAGGTTTGGTCCCATTGCTGAGAGTTCCTCTTCAACACTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR GCA 90 bp | GCAACAGAAGTACACTTAGCGAAACAGGAGGAAAATCATCCCAGGCGCTGCCTTTTTCTGGATCTGGGTTaGTCATCTCTCTGTCCTCTA | + |
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Preference number: 4 (lower is better) Translates to: ATEVHLAKQEENHPRRCLFLDLG*SSLCPL Trigger: TAGAGGACAGAGAGATGAGCAACCCAGATCCAGAAA...AAGGCAGCGCCTGGGATGATTTTCCTCCTGTTTCGCTAAGTGTACTTCTGTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR GCA 90 bp | GCAACAGAAGTACACTTAGCGAAACAGGAGGAAAATCATCCCAGGCGCTGCCTTAGATCCTGGAACCAATaGGCAAAGTGTCTCAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: ATEVHLAKQEENHPRRCLRSWNQ*AKCLKA Trigger: AGCTTTGAGACACTTTGCGCATTGGTTCCAGGATCT...AAGGCAGCGCCTGGGATGATTTTCCTCCTGTTTCGCTAAGTGTACTTCTGTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CCA 90 bp | TTCCTTCAGAGCACTGGAGGTTGCAACAGAAGTACACTTAGCGAAACAGGAGGAAAACTGAGTAGTGACTaGCAGTTGGAGCCCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: FLQSTGGCNRSTLSETGGKLSSD*QLEPSL Trigger: CAAAGAGGGCTCCAACTGCCAGTCACTACTCAGTTT...TCCTCCTGTTTCGCTAAGTGTACTTCTGTTGCAACCTCCAGTGCTCTGAAGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CCA 90 bp | CAGAGCACTGGAGGTTGCAACAGAAGTACACTTAGCGAAACAGGAGGAAAATCACACTCCTTCAGATCCTaGAACCAATGCGCAAAGTGT | + |
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Preference number: 4 (lower is better) Translates to: QSTGGCNRSTLSETGGKSHSFRS*NQCAKC Trigger: ACACTTTGCGCATTGGTTCCAGGATCTGAAGGAGTG...TGATTTTCCTCCTGTTTCGCTAAGTGTACTTCTGTTGCAACCTCCAGTGCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CCA 90 bp | TTCCTTCAGAGCACTGGAGGTTGCAACAGAAGTACACTTAGCGAAACAGGAGGACTGCTCCATTATAGATaGAAGAATCTTGGGAGGGTG | + |
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Preference number: 4 (lower is better) Translates to: FLQSTGGCNRSTLSETGGLLHYR*KNLGRV Trigger: CACCCTCCCAAGATTCTTCCATCTATAATGGAGCAG...TCCTCCTGTTTCGCTAAGTGTACTTCTGTTGCAACCTCCAGTGCTCTGAAGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR TCA 90 bp | TTCAGTGTTGAAGAGGAACTCTCAGCAATGGGACCAAACCTAGTCATTCCTTCAATGCCTCTGAAGGCCTaGACATGGAGAAAAACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSVEEELSAMGPNLVIPSMPLKA*TWRKTQ Trigger: TTGGGTTTTTCTCCATGTTCAGGCCTTCAGAGGCAT...TGAAGGAATGACTAGGTTTGGTCCCATTGCTGAGAGTTCCTCTTCAACACTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR TCA 90 bp | GCAACAGAAGTACACTTAGCGAAACAGGAGGAAAATCATCCCAGGCGCTGCCTTAAAGTGTCTCAAAGCTaGATTTTCTGGATCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ATEVHLAKQEENHPRRCLKVSQS*IFWIWV Trigger: AACCCAGATCCAGAAAATTCAGCTTTGAGACACTTT...AAGGCAGCGCCTGGGATGATTTTCCTCCTGTTTCGCTAAGTGTACTTCTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR TCA 90 bp | GCAACAGAAGTACACTTAGCGAAACAGGAGGAAAATCATCCCAGGCGCTGCCTTAGGTTAACTGCAATCTaGAAGACTGCGATGGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: ATEVHLAKQEENHPRRCLRLTAI*KTAMVI Trigger: TATAACCATCGCAGTCTTTCAGATTGCAGTTAACCT...AAGGCAGCGCCTGGGATGATTTTCCTCCTGTTTCGCTAAGTGTACTTCTGTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR TCA 90 bp | TTCCTTCAGAGCACTGGAGGTTGCAACAGAAGTACACTTAGCGAAACAGGAGGAATAGTCATGATGGTCTaGATCACCAAGGCGATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLQSTGGCNRSTLSETGGIVMMV*ITKAIK Trigger: CTTTATCGCCTTGGTGATTCAGACCATCATGACTAT...TCCTCCTGTTTCGCTAAGTGTACTTCTGTTGCAACCTCCAGTGCTCTGAAGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR TCA 90 bp | CAGAGCACTGGAGGTTGCAACAGAAGTACACTTAGCGAAACAGGAGGAAAATCACTTTCGGCACTTAGCTaGGCAGAGAATGTATATGCT | + |
|
Preference number: 4 (lower is better) Translates to: QSTGGCNRSTLSETGGKSLSALS*AENVYA Trigger: AGCATATACATTCTCTGCTCAGCTAAGTGCCGAAAG...TGATTTTCCTCCTGTTTCGCTAAGTGTACTTCTGTTGCAACCTCCAGTGCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CCA 90 bp | CAGAGCACTGGAGGTTGCAACAGAAGTACACTTAGCGAAACAGGAGGAAAATCAATGAGCATCACACCTTaGCCAAACAAGAGAAACAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSTGGCNRSTLSETGGKSMSITP*PNKRNR Trigger: CCTGTTTCTCTTGTTTGGCCAAGGTGTGATGCTCAT...TGATTTTCCTCCTGTTTCGCTAAGTGTACTTCTGTTGCAACCTCCAGTGCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CCA 90 bp | CTCTGGCATTTAAAAATTAAATCCATGGGGCCAAGGATATATCTTAGTGACAGATGGCTCTTGTGGGTGTaGCTCATTAGGGCTCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LWHLKIKSMGPRIYLSDRWLLWV*LIRAPG Trigger: ACCCGGAGCCCTAATGAGCCACACCCACAAGAGCCA...TCTGTCACTAAGATATATCCTTGGCCCCATGGATTTAATTTTTAAATGCCAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR GCA 90 bp | TTCCTTCAGAGCACTGGAGGTTGCAACAGAAGTACACTTAGCGAAACAGGAGGAAGCAGAGAATGTATATaGTTCTCATTAGGAAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: FLQSTGGCNRSTLSETGGSRECI*FSLGRP Trigger: GGGTCTTCCTAATGAGAAGCATATACATTCTCTGCT...TCCTCCTGTTTCGCTAAGTGTACTTCTGTTGCAACCTCCAGTGCTCTGAAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CCA 90 bp | CTCTGGCATTTAAAAATTAAATCCATGGGGCCAAGGATATATCTTAGTGACAGACCAAGAGTTGCTCGGTaGAGTTCTGCAGCTGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LWHLKIKSMGPRIYLSDRPRVAR*SSAAGV Trigger: GACTCCAGCTGCAGAACTCCACCGAGCAACTCTTGG...TCTGTCACTAAGATATATCCTTGGCCCCATGGATTTAATTTTTAAATGCCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CCA 90 bp | TTCAGTGTTGAAGAGGAACTCTCAGCAATGGGACCAAACCTAGTCATTCCTTCAAGCAGAGTATCACAGTaGGATAAACCCAAGAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: FSVEEELSAMGPNLVIPSSRVSQ*DKPKSC Trigger: GCAACTCTTGGGTTTATCCCACTGTGATACTCTGCT...TGAAGGAATGACTAGGTTTGGTCCCATTGCTGAGAGTTCCTCTTCAACACTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CCA 90 bp | GCAACAGAAGTACACTTAGCGAAACAGGAGGAAAATCATCCCAGGCGCTGCCTTCTATCGGACTTTGCATaGAAAAACATGCTCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: ATEVHLAKQEENHPRRCLLSDFA*KNMLFL Trigger: TAAGAAGAGCATGTTTTTCCATGCAAAGTCCGATAG...AAGGCAGCGCCTGGGATGATTTTCCTCCTGTTTCGCTAAGTGTACTTCTGTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CCA 90 bp | CAGAGCACTGGAGGTTGCAACAGAAGTACACTTAGCGAAACAGGAGGAAAATCACTCCAAATGTTGCTATaGCCTCTACTGCTCCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: QSTGGCNRSTLSETGGKSLQMLL*PLLLHY Trigger: ATAATGGAGCAGTAGAGGCCATAGCAACATTTGGAG...TGATTTTCCTCCTGTTTCGCTAAGTGTACTTCTGTTGCAACCTCCAGTGCTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CCA 90 bp | GTGTCCAGTAGCTCCTTTATCCTGCAGTCATGTCTTCCCTCTTGTAATGGAATGTTTCTGATAGTGTTCTaGGCTGACCATGCTGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: VSSSSFILQSCLPSCNGMFLIVF*ADHAVY Trigger: ATATACAGCATGGTCAGCCCAGAACACTATCAGAAA...CATTCCATTACAAGAGGGAAGACATGACTGCAGGATAAAGGAGCTACTGGACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR TCA 90 bp | CCAAACAAGGGTTGTCAGCTGTTAATATTGGTGGTTAATATTGTCAATTTGACATCATCTCTGGGCTGGTaGGATTCTTGCTGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PNKGCQLLILVVNIVNLTSSLGW*DSCWVL Trigger: CAGAACCCAGCAAGAATCTCACCAGCCCAGAGATGA...TGTCAAATTGACAATATTAACCACCAATATTAACAGCTGACAACCCTTGTTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR GCA 90 bp | CCAAACAAGGGTTGTCAGCTGTTAATATTGGTGGTTAATATTGTCAATTTGACACTGAGTGAGTTCTGTTaGTCTGGGCTTCCTTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PNKGCQLLILVVNIVNLTLSEFC*SGLPWA Trigger: TGCCCAAGGAAGCCCAGAGCAACAGAACTCACTCAG...TGTCAAATTGACAATATTAACCACCAATATTAACAGCTGACAACCCTTGTTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CCA 90 bp | GCGAAACAGGAGGAAAATCATCCCAGGCGCTGCCTTTTTAGATCCACAAAGTACCTAGATTCTTTGAATTaGCAAACAATTCTGAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AKQEENHPRRCLFRSTKYLDSLN*QTILSE Trigger: CTCACTCAGAATTGTTTGCCAATTCAAAGAATCTAG...GTACTTTGTGGATCTAAAAAGGCAGCGCCTGGGATGATTTTCCTCCTGTTTCGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR TCA 90 bp | CCAAACAAGGGTTGTCAGCTGTTAATATTGGTGGTTAATATTGTCAATTTGACAACTCAGCTGTTTGCATaGGCATCACACCTTGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PNKGCQLLILVVNIVNLTTQLFA*ASHLGQ Trigger: TTGGCCAAGGTGTGATGCTCATGCAAACAGCTGAGT...TGTCAAATTGACAATATTAACCACCAATATTAACAGCTGACAACCCTTGTTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR GCA 90 bp | CTTAACAGAACTAGAATTTCCAAGTTCTTGATATTCATGGGGACCCCAAACAAGAAGAACTCAGCTGTTTaGATGAGCATCACACCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNRTRISKFLIFMGTPNKKNSAV*MSITPW Trigger: CCAAGGTGTGATGCTCATGCAAACAGCTGAGTTCTT...CTTGTTTGGGGTCCCCATGAATATCAAGAACTTGGAAATTCTAGTTCTGTTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR GCA 90 bp | CTTTACTTCTTGATTGAAGATGCAATGTGTCCAGTAGCTCCTTTATCCTGCAGTTGCTATGGCCTCTACTaGTCCATTATAGATGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LYFLIEDAMCPVAPLSCSCYGLY*SIIDGR Trigger: TCTTCCATCTATAATGGAGCAGTAGAGGCCATAGCA...ACTGCAGGATAAAGGAGCTACTGGACACATTGCATCTTCAATCAAGAAGTAAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR GCA 90 bp | TTCAGTGTTGAAGAGGAACTCTCAGCAATGGGACCAAACCTAGTCATTCCTTCATGCAATCTGAAAGACTaGGATGGTTATAAGAAACGA | + |
|
Preference number: 4 (lower is better) Translates to: FSVEEELSAMGPNLVIPSCNLKD*DGYKKR Trigger: TCGTTTCTTATAACCATCGCAGTCTTTCAGATTGCA...TGAAGGAATGACTAGGTTTGGTCCCATTGCTGAGAGTTCCTCTTCAACACTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CCA 90 bp | CTCTGGCATTTAAAAATTAAATCCATGGGGCCAAGGATATATCTTAGTGACAGACTCATTTGTCATCTCTaGGCTGGTGAGATTCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWHLKIKSMGPRIYLSDRLICHL*AGEILA Trigger: AGCAAGAATCTCACCAGCCCAGAGATGACAAATGAG...TCTGTCACTAAGATATATCCTTGGCCCCATGGATTTAATTTTTAAATGCCAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR CAA 72 bp | ATGGGGACCCCAAACAAGGGTTGTCAGCTGTTAATATaGGTGGTTAATATTGTCAATTTGACAAGATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: MGTPNKGCQLLI*VVNIVNLTRSG Trigger: TCCAGATCTTGTCAAATTGACAATATTAACCACCAATATTAACAGCTGACAACCCTTGTTTGGGGTCCCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR TCA 90 bp | CCAAACAAGGGTTGTCAGCTGTTAATATTGGTGGTTAATATTGTCAATTTGACATGCGTGAGTAATTCATaGGAAACAGAGATCCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PNKGCQLLILVVNIVNLTCVSNS*ETEILR Trigger: TCGCAGGATCTCTGTTTCTCATGAATTACTCACGCA...TGTCAAATTGACAATATTAACCACCAATATTAACAGCTGACAACCCTTGTTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CCA 90 bp | CTCTGGCATTTAAAAATTAAATCCATGGGGCCAAGGATATATCTTAGTGACAGAAGTACATTGTTCCAGTaGCTTTGGACAATCGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWHLKIKSMGPRIYLSDRSTLFQ*LWTIVS Trigger: AGAGACGATTGTCCAAAGCCACTGGAACAATGTACT...TCTGTCACTAAGATATATCCTTGGCCCCATGGATTTAATTTTTAAATGCCAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| 3UTR CAA 72 bp | TTCTTAGAACTTAACAGAACTAGAATTTCCAAGTTCTaGATATTCATGGGGACCCCAAACAAGGGTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLELNRTRISKF*IFMGTPNKGCQ Trigger: CTGACAACCCTTGTTTGGGGTCCCCATGAATATCAAGAACTTGGAAATTCTAGTTCTGTTAAGTTCTAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR GCA 90 bp | CCAAACAAGGGTTGTCAGCTGTTAATATTGGTGGTTAATATTGTCAATTTGACAGTCTCTATCGGACTTTaGATGGAAAAACATGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PNKGCQLLILVVNIVNLTVSIGL*MEKHAL Trigger: AAGAGCATGTTTTTCCATGCAAAGTCCGATAGAGAC...TGTCAAATTGACAATATTAACCACCAATATTAACAGCTGACAACCCTTGTTTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CAA 90 bp | CTGAGGTGGGAAGATTCACTGGAAATGTGGGCAGCACCATCCCCTTGGCTGGGGAGTAGTGACTGGCAGTaGGAGCCCTCTTTGATCTAC | + |
|
Preference number: 5 (lower is better) Translates to: LRWEDSLEMWAAPSPWLGSSDWQ*EPSLIY Trigger: GTAGATCAAAGAGGGCTCCAACTGCCAGTCACTACT...CCCCAGCCAAGGGGATGGTGCTGCCCACATTTCCAGTGAATCTTCCCACCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CAA 90 bp | CTGAGGTGGGAAGATTCACTGGAAATGTGGGCAGCACCATCCCCTTGGCTGGGGATAGATGGAAGAATCTaGGGAGGGTGCCTTGTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRWEDSLEMWAAPSPWLGIDGRI*GGCLVF Trigger: GAACACAAGGCACCCTCCCAAGATTCTTCCATCTAT...CCCCAGCCAAGGGGATGGTGCTGCCCACATTTCCAGTGAATCTTCCCACCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CAA 90 bp | GTGTCCAGTAGCTCCTTTATCCTGCAGTCATGTCTTCCCTCTTGTAATGGAATGAAGCTCCTCCAAATGTaGCTATGGCCTCTACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VSSSSFILQSCLPSCNGMKLLQM*LWPLLL Trigger: GAGCAGTAGAGGCCATAGCAACATTTGGAGGAGCTT...CATTCCATTACAAGAGGGAAGACATGACTGCAGGATAAAGGAGCTACTGGACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CAA 90 bp | GTGTCCAGTAGCTCCTTTATCCTGCAGTCATGTCTTCCCTCTTGTAATGGAATGATTGTTCCAGTGGCTTaGGACAATCGTCTCTATCGG | + |
|
Preference number: 5 (lower is better) Translates to: VSSSSFILQSCLPSCNGMIVPVA*DNRLYR Trigger: CCGATAGAGACGATTGTCCAAAGCCACTGGAACAAT...CATTCCATTACAAGAGGGAAGACATGACTGCAGGATAAAGGAGCTACTGGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS GCA 90 bp | CCTCTAGATTCTTTGAATTGGCAAACAATTCTGAGTGAGTTCTGTTaGTCTGGGCTTCCTTGGGCACAGTACATTGTTCCAGTGGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PLDSLNWQTILSEFC*SGLPWAQYIVPVAL Trigger: CAAAGCCACTGGAACAATGTACTGTGCCCAAGGAAGCCCAGAGCAACAGAACTCACTCAGAATTGTTTGCCAATTCAAAGAATCTAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045560.15 ENSMUST00000164473.2 |
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| CDS-3UTR CAA 90 bp | TTCAGTGTTGAAGAGGAACTCTCAGCAATGGGACCAAACCTAGTCATTCCTTCATTTTCTGGATCTGGGTaGCTCATCTCTCTGTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FSVEEELSAMGPNLVIPSFSGSG*LISLSS Trigger: AGAGGACAGAGAGATGAGCAACCCAGATCCAGAAAA...TGAAGGAATGACTAGGTTTGGTCCCATTGCTGAGAGTTCCTCTTCAACACTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CAA 90 bp | CTCTGGCATTTAAAAATTAAATCCATGGGGCCAAGGATATATCTTAGTGACAGATTGCTCTGGGCTTCCTaGGGCACAGTACATTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LWHLKIKSMGPRIYLSDRLLWAS*GTVHCS Trigger: GGAACAATGTACTGTGCCCAAGGAAGCCCAGAGCAA...TCTGTCACTAAGATATATCCTTGGCCCCATGGATTTAATTTTTAAATGCCAGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
||
| CDS-3UTR CAA 90 bp | TTCCTTCAGAGCACTGGAGGTTGCAACAGAAGTACACTTAGCGAAACAGGAGGATGTCCTCTAGATTCTTaGAATTGGCAAACAATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLQSTGGCNRSTLSETGGCPLDS*NWQTIL Trigger: CAGAATTGTTTGCCAATTCAAAGAATCTAGAGGACA...TCCTCCTGTTTCGCTAAGTGTACTTCTGTTGCAACCTCCAGTGCTCTGAAGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS-3UTR CAA 90 bp | CCAAACAAGGGTTGTCAGCTGTTAATATTGGTGGTTAATATTGTCAATTTGACAGGGCTGGTGAGATTCTaGCTGGGTTCTGACAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PNKGCQLLILVVNIVNLTGLVRF*LGSDRN Trigger: ATTCCTGTCAGAACCCAGCAAGAATCTCACCAGCCC...TGTCAAATTGACAATATTAACCACCAATATTAACAGCTGACAACCCTTGTTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS GCA 90 bp | ACCAATGCGCAAAGTGTCTCAAAGCTGAATTTTCTGGATCTGGGTTaGTCATCTCTCTGTCCTCTAGATTCTTTGAATTGGCAAACAATT | + |
|
Preference number: 5 (lower is better) Translates to: TNAQSVSKLNFLDLG*SSLCPLDSLNWQTI Trigger: AATTGTTTGCCAATTCAAAGAATCTAGAGGACAGAGAGATGAGCAACCCAGATCCAGAAAATTCAGCTTTGAGACACTTTGCGCATTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045560.15 ENSMUST00000164473.2 |
||
| CDS-3UTR CAA 90 bp | CCAAACAAGGGTTGTCAGCTGTTAATATTGGTGGTTAATATTGTCAATTTGACACTTGGGCACAGTACATaGTTCCAGTGGCTTTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: PNKGCQLLILVVNIVNLTLGHST*FQWLWT Trigger: TGTCCAAAGCCACTGGAACAATGTACTGTGCCCAAG...TGTCAAATTGACAATATTAACCACCAATATTAACAGCTGACAACCCTTGTTTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045560.15 |
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| CDS CAA 72 bp | AGTTCTGTTGCTCTGGGCTTCCTTGGGCACAGTACATaGTTCCAGTGGCTTTGGACAATCGTCTCTATCGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSVALGFLGHST*FQWLWTIVSIG Trigger: TCCGATAGAGACGATTGTCCAAAGCCACTGGAACAATGTACTGTGCCCAAGGAAGCCCAGAGCAACAGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045560.15 ENSMUST00000164473.2 |
||
| CDS CAA 90 bp | CAAACAGGAAGGATCTCATTTGTCATCTCTGGGCTGGTGAGATTCTaGCTGGGTTCTGACAGGAATGGGATTAAGAATGCCTCTGAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QTGRISFVISGLVRF*LGSDRNGIKNASEG Trigger: GCCTTCAGAGGCATTCTTAATCCCATTCCTGTCAGAACCCAGCAAGAATCTCACCAGCCCAGAGATGACAAATGAGATCCTTCCTGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045560.15 ENSMUST00000164473.2 |
||
| CDS TCA 72 bp | CAGATCCTGGAACCAATGCGCAAAGTGTCTCAAAGCTaGATTTTCTGGATCTGGGTTGCTCATCTCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: QILEPMRKVSQS*IFWIWVAHLSV Trigger: GACAGAGAGATGAGCAACCCAGATCCAGAAAATTCAGCTTTGAGACACTTTGCGCATTGGTTCCAGGATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045560.15 ENSMUST00000164473.2 |
||
| CDS GCA 72 bp | TCTTTGAATTGGCAAACAATTCTGAGTGAGTTCTGTTaGTCTGGGCTTCCTTGGGCACAGTACATTGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SLNWQTILSEFC*SGLPWAQYIVP Trigger: TGGAACAATGTACTGTGCCCAAGGAAGCCCAGAGCAACAGAACTCACTCAGAATTGTTTGCCAATTCAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045560.15 ENSMUST00000164473.2 |
||
| CDS CAA 72 bp | GATCTGGGTTGCTCATCTCTCTGTCCTCTAGATTCTTaGAATTGGCAAACAATTCTGAGTGAGTTCTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: DLGCSSLCPLDS*NWQTILSEFCC Trigger: GCAACAGAACTCACTCAGAATTGTTTGCCAATTCAAAGAATCTAGAGGACAGAGAGATGAGCAACCCAGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045560.15 ENSMUST00000164473.2 |
||
| CDS CAA 90 bp | AATTTTCTGGATCTGGGTTGCTCATCTCTCTGTCCTCTAGATTCTTaGAATTGGCAAACAATTCTGAGTGAGTTCTGTTGCTCTGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: NFLDLGCSSLCPLDS*NWQTILSEFCCSGL Trigger: AAGCCCAGAGCAACAGAACTCACTCAGAATTGTTTGCCAATTCAAAGAATCTAGAGGACAGAGAGATGAGCAACCCAGATCCAGAAAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045560.15 ENSMUST00000164473.2 |
||
| CDS TCA 72 bp | GAATGTATATGCTTCTCATTAGGAAGACCCCCGCAATaGCAGCGAAGTAACTCCCATAAACTAAAAACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: ECICFSLGRPPQ*QRSNSHKLKTE Trigger: CTCAGTTTTTAGTTTATGGGAGTTACTTCGCTGTCATTGCGGGGGTCTTCCTAATGAGAAGCATATACATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045560.15 ENSMUST00000164473.2 |
||
| CDS CAA 72 bp | GCAAAGTGTCTCAAAGCTGAATTTTCTGGATCTGGGTaGCTCATCTCTCTGTCCTCTAGATTCTTTGAATTG | + |
|
Preference number: 6 (lower is better) Translates to: AKCLKAEFSGSG*LISLSSRFFEL Trigger: CAATTCAAAGAATCTAGAGGACAGAGAGATGAGCAACCCAGATCCAGAAAATTCAGCTTTGAGACACTTTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045560.15 ENSMUST00000164473.2 |
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