Pregenerated sensors for SLC19A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040918Ensembl transcript IDs: ENSMUST00000044021.12, ENSMUST00000159230.8, ENSMUST00000169394.2
Found 153 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGTGGCTCCTGAAGCCCTGGTCCCACCAGGCCACAGGTCTGAGTaGGTGATGAATGTGACTGGAAAGCATCACAGTCACATGCGAATC | + |
|
Preference number: 1 (lower is better) Translates to: PVAPEALVPPGHRSE*VMNVTGKHHSHMRI Trigger: GATTCGCATGTGACTGTGATGCTTTCCAGTCACATTCATCACGCACTCAGACCTGTGGCCTGGTGGGACCAGGGCTTCAGGAGCCACAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR GCA 90 bp | ACGTACGCCATGGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTaGACTTTGGTCTTTCCAGTGCTGGAACTTGAGCCAGGGTCTTCC | + |
|
Preference number: 1 (lower is better) Translates to: TYAMASVTLTPPMHV*TLVFPVLELEPGSS Trigger: GGAAGACCCTGGCTCAAGTTCCAGCACTGGAAAGACCAAAGTGCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR CCA 90 bp | CCATGGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTGCACTTTaGTCTTTCCAGTGCTGGAACTTGAGCCAGGGTCTTCCACACACT | + |
|
Preference number: 1 (lower is better) Translates to: PWPLLPSLLPCTFAL*SFQCWNLSQGLPHT Trigger: AGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCACTGGAAAGACCAAAGTGCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR GCA 90 bp | AAAGGAAGACGTACGCCATGGCCTCTGTTACCCTCACTCCTCCCATaGACGTTTGCACTTTGGTCTTTCCAGTGCTGGAACTTGAGCCAG | + |
|
Preference number: 1 (lower is better) Translates to: KGRRTPWPLLPSLLP*TFALWSFQCWNLSQ Trigger: CTGGCTCAAGTTCCAGCACTGGAAAGACCAAAGTGCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGTCTTCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR CCA 90 bp | CCCTCACTCCTCCCATGCACGTTTGCACTTTGGTCTTTCCAGTGCTaGAACTTGAGCCAGGGTCTTCCACACACTTGTCAAGCTTCAGTT | + |
|
Preference number: 1 (lower is better) Translates to: PSLLPCTFALWSFQC*NLSQGLPHTCQASV Trigger: AACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCACTGGAAAGACCAAAGTGCAAACGTGCATGGGAGGAGTGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR CCA 90 bp | TTAGTGTTCTTCTCTTTCCCTAGCTGCAAAGGAAGACGTACGCCATaGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTGCACTTTGG | + |
|
Preference number: 1 (lower is better) Translates to: LVFFSFPSCKGRRTP*PLLPSLLPCTFALW Trigger: CCAAAGTGCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGTCTTCCTTTGCAGCTAGGGAAAGAGAAGAACACTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR GCA 90 bp | GCGTTGAACCCGAGCAGATACTGCCAGTGGGGAATGATTTCCATCTaGAGACACACACACACATGCGCACAAGTAACACTGAAACCAGAA | + |
|
Preference number: 1 (lower is better) Translates to: ALNPSRYCQWGMISI*RHTHTCAQVTLKPE Trigger: TTCTGGTTTCAGTGTTACTTGTGCGCATGTGTGTGTGTGTCTGCAGATGGAAATCATTCCCCACTGGCAGTATCTGCTCGGGTTCAACGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR TCA 90 bp | GTTCCGACTGATATCTTCTCGTCTTGGATAAGAAAGCCAAGACAATaGGAGGTATATGGGAATGATATTGTCTCAAGGGAAAAGAGCTCA | + |
|
Preference number: 1 (lower is better) Translates to: VPTDIFSSWIRKPRQ*EVYGNDIVSREKSS Trigger: TGAGCTCTTTTCCCTTGAGACAATATCATTCCCATATACCTCTCATTGTCTTGGCTTTCTTATCCAAGACGAGAAGATATCAGTCGGAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR CAA 90 bp | ATGAGGTGGCCGGGGCAAGTGCTGACAGAACGTGTCTGTCGAGGCTaGTACCATCCTGTGGCTCCTGAAGCCCTGGTCCCACCAGGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: MRWPGQVLTERVCRG*YHPVAPEALVPPGH Trigger: GTGGCCTGGTGGGACCAGGGCTTCAGGAGCCACAGGATGGTACAAGCCTCGACAGACACGTTCTGTCAGCACTTGCCCCGGCCACCTCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR CAA 90 bp | GCCATGGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTGCACTTaGGTCTTTCCAGTGCTGGAACTTGAGCCAGGGTCTTCCACACAC | + |
|
Preference number: 2 (lower is better) Translates to: AMASVTLTPPMHVCT*VFPVLELEPGSSTH Trigger: GTGTGTGGAAGACCCTGGCTCAAGTTCCAGCACTGGAAAGACCAAAGTGCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR TCA 90 bp | CGTGTCTGTCGAGGCTTGTACCATCCTGTGGCTCCTGAAGCCCTGGTCCCACCACTGCAAGGTGTTAGTTaGGTAGCTGCTTTGAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: RVCRGLYHPVAPEALVPPLQGVS*VAALKP Trigger: TGGCTTCAAAGCAGCTACTCAACTAACACCTTGCAG...TGGTGGGACCAGGGCTTCAGGAGCCACAGGATGGTACAAGCCTCGACAGACACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAAGTATAGGAGGAAAGAGACCAAAATGTAAGACTGGAGACTGCTACTCTGACCCATCCTGTGGCTCCTaGAGCCCTGGTCCCACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: GSIGGKRPKCKTGDCYSDPSCGS*SPGPTR Trigger: CCTGGTGGGACCAGGGCTTCAGGAGCCACAGGATGG...GTCAGAGTAGCAGTCTCCAGTCTTACATTTTGGTCTCTTTCCTCCTATACTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAAACCAGAATGAGGTGGCCGGGGCAAGTGCTGACAGAACGTGTCTGTCGAGCGGTGCAAAATCCTTaGTTGGAAGCAGCAGCACTT | + |
|
Preference number: 2 (lower is better) Translates to: TETRMRWPGQVLTERVCRAVQNP*LEAAAL Trigger: AAGTGCTGCTGCTTCCAAGCAAGGATTTTGCACCGC...TCGACAGACACGTTCTGTCAGCACTTGCCCCGGCCACCTCATTCTGGTTTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR GCA 90 bp | ACTGAAACCAGAATGAGGTGGCCGGGGCAAGTGCTGACAGAACGTGTCTGTCGATCCAAGCAGCTGCGGTaGAAAATCCTTGCTTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: TETRMRWPGQVLTERVCRSKQLR*KILAWK Trigger: CTTCCAAGCAAGGATTTTGCACCGCAGCTGCTTGGA...TCGACAGACACGTTCTGTCAGCACTTGCCCCGGCCACCTCATTCTGGTTTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR GCA 90 bp | GACGTACGCCATGGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTGCACTTTTCCAAGCAGCTGCGGTaGAAAATCCTTGCTTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: DVRHGLCYPHSSHARLHFSKQLR*KILAWK Trigger: CTTCCAAGCAAGGATTTTGCACCGCAGCTGCTTGGA...AAAGTGCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGAAGACGTACGCCATGGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTGCAGCATCACAGTCACATaGGAATCAGGGAAAGAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: RKTYAMASVTLTPPMHVCSITVT*ESGKEQ Trigger: CTGCTCTTTCCCTGATTCGCATGTGACTGTGATGCT...GCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGTCTTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCTGGAACTTGAGCCAGGGTCTTCCACACACTTGTCAAGCTTCAGTTTTGCAAGAAACCAGAATGAGGTaGCCGGGGCAAGTGCTGACA | + |
|
Preference number: 2 (lower is better) Translates to: CWNLSQGLPHTCQASVLQETRMR*PGQVLT Trigger: TGTCAGCACTTGCCCCGGCCACCTCATTCTGGTTTC...TTGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAAGTATAGGAGGAAAGAGACCAAAATGTAAGACTGGAGACTGCTACTCTGACACACTGAAACCAGAATaGGGTGGCCGGGGCAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: GSIGGKRPKCKTGDCYSDTLKPE*GGRGKC Trigger: GCACTTGCCCCGGCCACCTCATTCTGGTTTCAGTGT...GTCAGAGTAGCAGTCTCCAGTCTTACATTTTGGTCTCTTTCCTCCTATACTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGAAGACGTACGCCATGGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTGCAGAGGTATATGGGAATaGTATTGTCTCAAGGGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: RKTYAMASVTLTPPMHVCRGIWE*YCLKGK Trigger: TTTTCCCTTGAGACAATATCATTCCCATATACCTCT...GCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGTCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCTGGAACTTGAGCCAGGGTCTTCCACACACTTGTCAAGCTTCAGTTTTGCAAGCGGTGCAAAATCCTTaGTTGGAAGCAGCAGCACTT | + |
|
Preference number: 2 (lower is better) Translates to: CWNLSQGLPHTCQASVLQAVQNP*LEAAAL Trigger: AAGTGCTGCTGCTTCCAAGCAAGGATTTTGCACCGC...TTGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCTGGAACTTGAGCCAGGGTCTTCCACACACTTGTCAAGCTTCAGTTTTGCAAAACCCGAGCAGATACTaGCAGTGGGGAATGATTTCC | + |
|
Preference number: 2 (lower is better) Translates to: CWNLSQGLPHTCQASVLQNPSRY*QWGMIS Trigger: GGAAATCATTCCCCACTGGCAGTATCTGCTCGGGTT...TTGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR GCA 90 bp | CTAGGGTCTGCATTCTGCAAGTATGGCCGCGTGGTAAAATGTGGATACAGTCTTCTTTGGTCTTTCCAGTaGTGGAACTTGAGCCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: LGSAFCKYGRVVKCGYSLLWSFQ*WNLSQG Trigger: ACCCTGGCTCAAGTTCCAGCACTGGAAAGACCAAAG...AAGACTGTATCCACATTTTACCACGCGGCCATACTTGCAGAATGCAGACCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAGGGTCTGCATTCTGCAAGTATGGCCGCGTGGTAAAATGTGGATACAGTCTTTGCAAAATCCTTGCTTaGAAGCAGCAGCACTTCGGG | + |
|
Preference number: 2 (lower is better) Translates to: LGSAFCKYGRVVKCGYSLCKILA*KQQHFG Trigger: CCCGAAGTGCTGCTGCTTCCAAGCAAGGATTTTGCA...AAGACTGTATCCACATTTTACCACGCGGCCATACTTGCAGAATGCAGACCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTCCAAAAATATACAACGGTCAAATTGGGAAGAAGCACTAACTCTCATACCGTGGCTCCTGAAGCCCTaGTCCCACCAGGCCACAGGT | + |
|
Preference number: 2 (lower is better) Translates to: VSKNIQRSNWEEALTLIPWLLKP*SHQATG Trigger: ACCTGTGGCCTGGTGGGACCAGGGCTTCAGGAGCCA...CGGTATGAGAGTTAGTGCTTCTTCCCAATTTGACCGTTGTATATTTTTGGAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAGACGTACGCCATGGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTGCTATGCAAATATAAAATaGGCTCCCTGTATCTCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: RKTYAMASVTLTPPMHVCYANIK*APCISN Trigger: GTTAGAGATACAGGGAGCCCATTTTATATTTGCATA...GCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGTCTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGAAGACGTACGCCATGGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTGCTTTATAAAAAGGCTGTaGAATAATCCAGTTCCGACT | + |
|
Preference number: 2 (lower is better) Translates to: RKTYAMASVTLTPPMHVCFIKRL*NNPVPT Trigger: AGTCGGAACTGGATTATTCCACAGCCTTTTTATAAA...GCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGTCTTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR GCA 90 bp | TGCTGGAACTTGAGCCAGGGTCTTCCACACACTTGTCAAGCTTCAGTTTTGCAAGGAATGATTTCCATCTaGAGACACACACACACATGC | + |
|
Preference number: 2 (lower is better) Translates to: CWNLSQGLPHTCQASVLQGMISI*RHTHTC Trigger: GCATGTGTGTGTGTGTCTGCAGATGGAAATCATTCC...TTGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAAGTATAGGAGGAAAGAGACCAAAATGTAAGACTGGAGACTGCTACTCTGACCTGCAAGGTGTTAGTTaGGTAGCTGCTTTGAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: GSIGGKRPKCKTGDCYSDLQGVS*VAALKP Trigger: TGGCTTCAAAGCAGCTACTCAACTAACACCTTGCAG...GTCAGAGTAGCAGTCTCCAGTCTTACATTTTGGTCTCTTTCCTCCTATACTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTCCAAAAATATACAACGGTCAAATTGGGAAGAAGCACTAACTCTCATACCGGAAACCAGAATGAGGTaGCCGGGGCAAGTGCTGACA | + |
|
Preference number: 2 (lower is better) Translates to: VSKNIQRSNWEEALTLIPETRMR*PGQVLT Trigger: TGTCAGCACTTGCCCCGGCCACCTCATTCTGGTTTC...CGGTATGAGAGTTAGTGCTTCTTCCCAATTTGACCGTTGTATATTTTTGGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAAGTATAGGAGGAAAGAGACCAAAATGTAAGACTGGAGACTGCTACTCTGACAGCAGACGCGCTGCTTaGTTATTCGGTTTTTCACAA | + |
|
Preference number: 2 (lower is better) Translates to: GSIGGKRPKCKTGDCYSDSRRAA*LFGFSQ Trigger: TTGTGAAAAACCGAATAACCAAGCAGCGCGTCTGCT...GTCAGAGTAGCAGTCTCCAGTCTTACATTTTGGTCTCTTTCCTCCTATACTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CCA 90 bp | AACGTTTCCAAAAATATACAACGGTCAAATTGGGAAGAAGCACTAACTCTCATAGCTTGTACCATCCTGTaGCTCCTGAAGCCCTGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: NVSKNIQRSNWEEALTLIACTIL*LLKPWS Trigger: GGACCAGGGCTTCAGGAGCCACAGGATGGTACAAGC...TATGAGAGTTAGTGCTTCTTCCCAATTTGACCGTTGTATATTTTTGGAAACGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCTTTTCAGTTGCAATTAAGAGTCCTTCATACATAACTATTACAGACGAGCAAGCTTGTACCATCCTGTaGCTCCTGAAGCCCTGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: TFSVAIKSPSYITITDEQACTIL*LLKPWS Trigger: GGACCAGGGCTTCAGGAGCCACAGGATGGTACAAGC...TTGCTCGTCTGTAATAGTTATGTATGAAGGACTCTTAATTGCAACTGAAAAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTCCAAAAATATACAACGGTCAAATTGGGAAGAAGCACTAACTCTCATACCGTGCAAAATCCTTGCTTaGAAGCAGCAGCACTTCGGG | + |
|
Preference number: 2 (lower is better) Translates to: VSKNIQRSNWEEALTLIPCKILA*KQQHFG Trigger: CCCGAAGTGCTGCTGCTTCCAAGCAAGGATTTTGCA...CGGTATGAGAGTTAGTGCTTCTTCCCAATTTGACCGTTGTATATTTTTGGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR TCA 90 bp | CACTTGTCAAGCTTCAGTTTTGCAATCTCAGTATTGAGAATACCGTGCAGCTACGGTCAACACTCTAGTTaGAAGCACCTACCTAGATTT | + |
|
Preference number: 2 (lower is better) Translates to: HLSSFSFAISVLRIPCSYGQHSS*KHLPRF Trigger: AAATCTAGGTAGGTGCTTTCAACTAGAGTGTTGACC...GTAGCTGCACGGTATTCTCAATACTGAGATTGCAAAACTGAAGCTTGACAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR GCA 90 bp | CACTTGTCAAGCTTCAGTTTTGCAATCTCAGTATTGAGAATACCGTGCAGCTACAGACACACACACACATaGGCACAAGTAACACTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: HLSSFSFAISVLRIPCSYRHTHT*AQVTLK Trigger: TTTCAGTGTTACTTGTGCGCATGTGTGTGTGTGTCT...GTAGCTGCACGGTATTCTCAATACTGAGATTGCAAAACTGAAGCTTGACAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTTTCTTCTTGTTTCTGGGCAACCAACTTCTTATAGAGCAACAAGGAAGTATACTTTGGTCTTTCCAGTaGTGGAACTTGAGCCAGGGT | + |
|
Preference number: 2 (lower is better) Translates to: CFFLFLGNQLLIEQQGSILWSFQ*WNLSQG Trigger: ACCCTGGCTCAAGTTCCAGCACTGGAAAGACCAAAG...TATACTTCCTTGTTGCTCTATAAGAAGTTGGTTGCCCAGAAACAAGAAGAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CCA 90 bp | GACACTTCGCAATCACAATGTTTCTTCTTGTTTCTGGGCAACCAACTTCTTATAAGCAGACGCGCTGCTTaGTTATTCGGTTTTTCACAA | + |
|
Preference number: 2 (lower is better) Translates to: DTSQSQCFFLFLGNQLLISRRAA*LFGFSQ Trigger: TTGTGAAAAACCGAATAACCAAGCAGCGCGTCTGCT...TATAAGAAGTTGGTTGCCCAGAAACAAGAAGAAACATTGTGATTGCGAAGTGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTTTCTTCTTGTTTCTGGGCAACCAACTTCTTATAGAGCAACAAGGAAGTATAAGCAGATACTGCCAGTaGGGAATGATTTCCATCTGC | + |
|
Preference number: 2 (lower is better) Translates to: CFFLFLGNQLLIEQQGSISRYCQ*GMISIC Trigger: GCAGATGGAAATCATTCCCCACTGGCAGTATCTGCT...TATACTTCCTTGTTGCTCTATAAGAAGTTGGTTGCCCAGAAACAAGAAGAAACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAAGTATAGGAGGAAAGAGACCAAAATGTAAGACTGGAGACTGCTACTCTGACGATATCTTCTCGTCTTaGATAAGAAAGCCAAGACAA | + |
|
Preference number: 2 (lower is better) Translates to: GSIGGKRPKCKTGDCYSDDIFSS*IRKPRQ Trigger: TTGTCTTGGCTTTCTTATCCAAGACGAGAAGATATC...GTCAGAGTAGCAGTCTCCAGTCTTACATTTTGGTCTCTTTCCTCCTATACTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CCA 90 bp | GACACTTCGCAATCACAATGTTTCTTCTTGTTTCTGGGCAACCAACTTCTTATACGTGATGAATGTGACTaGAAAGCATCACAGTCACAT | + |
|
Preference number: 2 (lower is better) Translates to: DTSQSQCFFLFLGNQLLIRDECD*KASQSH Trigger: ATGTGACTGTGATGCTTTCCAGTCACATTCATCACG...TATAAGAAGTTGGTTGCCCAGAAACAAGAAGAAACATTGTGATTGCGAAGTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAAGTATAGGAGGAAAGAGACCAAAATGTAAGACTGGAGACTGCTACTCTGACTATGCAAATATAAAATaGGCTCCCTGTATCTCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: GSIGGKRPKCKTGDCYSDYANIK*APCISN Trigger: GTTAGAGATACAGGGAGCCCATTTTATATTTGCATA...GTCAGAGTAGCAGTCTCCAGTCTTACATTTTGGTCTCTTTCCTCCTATACTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTTTCTTCTTGTTTCTGGGCAACCAACTTCTTATAGAGCAACAAGGAAGTATAAGACACACACACACATaGGCACAAGTAACACTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: CFFLFLGNQLLIEQQGSIRHTHT*AQVTLK Trigger: TTTCAGTGTTACTTGTGCGCATGTGTGTGTGTGTCT...TATACTTCCTTGTTGCTCTATAAGAAGTTGGTTGCCCAGAAACAAGAAGAAACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTTTCTTCTTGTTTCTGGGCAACCAACTTCTTATAGAGCAACAAGGAAGTATAAGAAAGCCAAGACAATaGGAGGTATATGGGAATGAT | + |
|
Preference number: 2 (lower is better) Translates to: CFFLFLGNQLLIEQQGSIRKPRQ*EVYGND Trigger: ATCATTCCCATATACCTCTCATTGTCTTGGCTTTCT...TATACTTCCTTGTTGCTCTATAAGAAGTTGGTTGCCCAGAAACAAGAAGAAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR TCA 90 bp | GACACTTCGCAATCACAATGTTTCTTCTTGTTTCTGGGCAACCAACTTCTTATAAAGTATCTCTCAAGATaGTCTAACTGTAGGAACGAA | + |
|
Preference number: 2 (lower is better) Translates to: DTSQSQCFFLFLGNQLLIKYLSR*SNCRNE Trigger: TTCGTTCCTACAGTTAGATCATCTTGAGAGATACTT...TATAAGAAGTTGGTTGCCCAGAAACAAGAAGAAACATTGTGATTGCGAAGTGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CCA 90 bp | GACACTTCGCAATCACAATGTTTCTTCTTGTTTCTGGGCAACCAACTTCTTATATTTATAAAAAGGCTGTaGAATAATCCAGTTCCGACT | + |
|
Preference number: 2 (lower is better) Translates to: DTSQSQCFFLFLGNQLLIFIKRL*NNPVPT Trigger: AGTCGGAACTGGATTATTCCACAGCCTTTTTATAAA...TATAAGAAGTTGGTTGCCCAGAAACAAGAAGAAACATTGTGATTGCGAAGTGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAGACGTACGCCATGGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTGCTGCGGTGCAAAATCCTaGCTTGGAAGCAGCAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: RKTYAMASVTLTPPMHVCCGAKS*LGSSST Trigger: AGTGCTGCTGCTTCCAAGCAAGGATTTTGCACCGCA...GCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGTCTTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR GCA 72 bp | CGTACGCCATGGCCTCTGTTACCCTCACTCCTCCCATaGACGTTTGCACTTTGGTCTTTCCAGTGCTGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: RTPWPLLPSLLP*TFALWSFQCWN Trigger: GTTCCAGCACTGGAAAGACCAAAGTGCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGAAGACGTACGCCATGGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTGCGGGTCTTCCACACACTaGTCAAGCTTCAGTTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: RKTYAMASVTLTPPMHVCGSSTH*SSFSFA Trigger: TGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCC...GCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGTCTTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR GCA 72 bp | CTCCTCCCATGCACGTTTGCACTTTGGTCTTTCCAGTaGTGGAACTTGAGCCAGGGTCTTCCACACACTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LLPCTFALWSFQ*WNLSQGLPHTC Trigger: ACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCACTGGAAAGACCAAAGTGCAAACGTGCATGGGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR CCA 72 bp | TTCTCTTTCCCTAGCTGCAAAGGAAGACGTACGCCATaGCCTCTGTTACCCTCACTCCTCCCATGCACGTTT | + |
|
Preference number: 3 (lower is better) Translates to: FSFPSCKGRRTP*PLLPSLLPCTF Trigger: AAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGTCTTCCTTTGCAGCTAGGGAAAGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGGAACTTGAGCCAGGGTCTTCCACACACTTGTCAAGCTTCAGTTTTGCAACGTGTCTGTCGAGGCTaGTACCATCCTGTGGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CWNLSQGLPHTCQASVLQRVCRG*YHPVAP Trigger: AGGAGCCACAGGATGGTACAAGCCTCGACAGACACG...TTGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR TCA 72 bp | GCACGTTTGCACTTTGGTCTTTCCAGTGCTGGAACTTaGGCCAGGGTCTTCCACACACTTGTCAAGCTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: ARLHFGLSSAGT*ARVFHTLVKLQ Trigger: CTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCACTGGAAAGACCAAAGTGCAAACGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR CCA 72 bp | CTCCCATGCACGTTTGCACTTTGGTCTTTCCAGTGCTaGAACTTGAGCCAGGGTCTTCCACACACTTGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: LPCTFALWSFQC*NLSQGLPHTCQ Trigger: TTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCACTGGAAAGACCAAAGTGCAAACGTGCATGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR GCA 72 bp | ACCATGAGGAGTTTAAATACATCCAAGCAGCTGCGGTaGAAAATCCTTGCTTGGAAGCAGCAGCACTTCGGG | + |
|
Preference number: 3 (lower is better) Translates to: TMRSLNTSKQLR*KILAWKQQHFG Trigger: CCCGAAGTGCTGCTGCTTCCAAGCAAGGATTTTGCACCGCAGCTGCTTGGATGTATTTAAACTCCTCATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAAGTATAGGAGGAAAGAGACCAAAATGTAAGACTGGAGACTGCTACTCTGACTTCCAGTGCTGGAACTaGAGCCAGGGTCTTCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: GSIGGKRPKCKTGDCYSDFQCWN*SQGLPH Trigger: GTGTGGAAGACCCTGGCTCAAGTTCCAGCACTGGAA...GTCAGAGTAGCAGTCTCCAGTCTTACATTTTGGTCTCTTTCCTCCTATACTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR GCA 72 bp | AAGTGCATACAGTACAGCCCACTAGGGTCTGCATTCTaGAAGTATGGCCGCGTGGTAAAATGTGGATACAGT | + |
|
Preference number: 3 (lower is better) Translates to: KCIQYSPLGSAF*KYGRVVKCGYS Trigger: ACTGTATCCACATTTTACCACGCGGCCATACTTGCAGAATGCAGACCCTAGTGGGCTGTACTGTATGCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR GCA 72 bp | GCCAGGGTCTTCCACACACTTGTCAAGCTTCAGTTTTaGAATCTCAGTATTGAGAATACCGTGCAGCTACGT | + |
|
Preference number: 3 (lower is better) Translates to: ARVFHTLVKLQF*NLSIENTVQLR Trigger: ACGTAGCTGCACGGTATTCTCAATACTGAGATTGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR TCA 72 bp | CACACTTGTCAAGCTTCAGTTTTGCAATCTCAGTATTaGGAATACCGTGCAGCTACGTCCGTCTTAACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: HTCQASVLQSQY*EYRAATSVLTR Trigger: CCTTGTTAAGACGGACGTAGCTGCACGGTATTCTCAATACTGAGATTGCAAAACTGAAGCTTGACAAGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CAA 90 bp | TGTTTCTTCTTGTTTCTGGGCAACCAACTTCTTATAGAGCAACAAGGAAGTATATGCGGTGCAAAATCCTaGCTTGGAAGCAGCAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: CFFLFLGNQLLIEQQGSICGAKS*LGSSST Trigger: AGTGCTGCTGCTTCCAAGCAAGGATTTTGCACCGCA...TATACTTCCTTGTTGCTCTATAAGAAGTTGGTTGCCCAGAAACAAGAAGAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR GCA 72 bp | AAAGTACAACAGATTCTTTTCACGTCTTCATCAAAGTaGATACAGTACAGCCCACTAGGGTCTGCATTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: KVQQILFTSSSK*IQYSPLGSAFC Trigger: GCAGAATGCAGACCCTAGTGGGCTGTACTGTATGCACTTTGATGAAGACGTGAAAAGAATCTGTTGTACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR TCA 72 bp | CAAGTATGGCCGCGTGGTAAAATGTGGATACAGTCTTaGTTTAGACACGTAAAGAAGGATCAGATTAGATGC | + |
|
Preference number: 3 (lower is better) Translates to: QVWPRGKMWIQS*FRHVKKDQIRC Trigger: GCATCTAATCTGATCCTTCTTTACGTGTCTAAATCAAGACTGTATCCACATTTTACCACGCGGCCATACTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR-3UTR CAA 90 bp | GACACTTCGCAATCACAATGTTTCTTCTTGTTTCTGGGCAACCAACTTCTTATATATATGGGAATGATATaGTCTCAAGGGAAAAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: DTSQSQCFFLFLGNQLLIYMGMI*SQGKRA Trigger: AGCTCTTTTCCCTTGAGACAATATCATTCCCATATA...TATAAGAAGTTGGTTGCCCAGAAACAAGAAGAAACATTGTGATTGCGAAGTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR TCA 72 bp | GATAAGAAAGCCAAGACAATGAGAGGTATATGGGAATaGTATTGTCTCAAGGGAAAAGAGCTCATTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: DKKAKTMRGIWE*YCLKGKELILF Trigger: AAACAAAATGAGCTCTTTTCCCTTGAGACAATATCATTCCCATATACCTCTCATTGTCTTGGCTTTCTTATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR CAA 72 bp | CCGGGGCAAGTGCTGACAGAACGTGTCTGTCGAGGCTaGTACCATCCTGTGGCTCCTGAAGCCCTGGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PGQVLTERVCRG*YHPVAPEALVP Trigger: TGGGACCAGGGCTTCAGGAGCCACAGGATGGTACAAGCCTCGACAGACACGTTCTGTCAGCACTTGCCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | GACGTACGCCATGGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTGCACTTTGTCCCTGCAGCAGGATaGCAGGCTTGTACCGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DVRHGLCYPHSSHARLHFVPAAG*QACTGG Trigger: ACCTCCGGTACAAGCCTGTCATCCTGCTGCAGGGAC...AAAGTGCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAAACCAGAATGAGGTGGCCGGGGCAAGTGCTGACAGAACGTGTCTGTCGAGTCCCTGCAGCAGGATaGCAGGCTTGTACCGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TETRMRWPGQVLTERVCRVPAAG*QACTGG Trigger: ACCTCCGGTACAAGCCTGTCATCCTGCTGCAGGGAC...TCGACAGACACGTTCTGTCAGCACTTGCCCCGGCCACCTCATTCTGGTTTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAAACCAGAATGAGGTGGCCGGGGCAAGTGCTGACAGAACGTGTCTGTCGACATTCCACAGGACTCTaGACACCCGCAGCCGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TETRMRWPGQVLTERVCRHSTGL*TPAAGL Trigger: CAGACCGGCTGCGGGTGTTCAGAGTCCTGTGGAATG...TCGACAGACACGTTCTGTCAGCACTTGCCCCGGCCACCTCATTCTGGTTTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGAACTTGAGCCAGGGTCTTCCACACACTTGTCAAGCTTCAGTTTTGCAACCGCCGCCGCTCGTCTaGACACCCTGGCTGGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: CWNLSQGLPHTCQASVLQPPPLV*TPWLAR Trigger: ACGTGCCAGCCAGGGTGTCCAGACGAGCGGCGGCGG...TTGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CCA 90 bp | AGGAAGACGTACGCCATGGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTGCAGTAGGCGATTTCGGTaGCTGTGGCGATGCCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RKTYAMASVTLTPPMHVCSRRFR*LWRCRR Trigger: TCTACGGCATCGCCACAGCCACCGAAATCGCCTACT...GCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGTCTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | CGTGTCTGTCGAGGCTTGTACCATCCTGTGGCTCCTGAAGCCCTGGTCCCACCATTCTACAGTAGCTTGTaGCTTTCTGGTACATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVCRGLYHPVAPEALVPPFYSSL*LSGTCP Trigger: TGGGCATGTACCAGAAAGTCACAAGCTACTGTAGAA...TGGTGGGACCAGGGCTTCAGGAGCCACAGGATGGTACAAGCCTCGACAGACACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGAACTTGAGCCAGGGTCTTCCACACACTTGTCAAGCTTCAGTTTTGCAAAGCACCCAGCAAGGTTaGAACGGCCTCCACACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: CWNLSQGLPHTCQASVLQSTQQG*NGLHTA Trigger: GGCGGTGTGGAGGCCGTTTCAACCTTGCTGGGTGCT...TTGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | GACGTACGCCATGGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTGCACTTTTCAGGAACTGAGTGGTaGTACATAAGCCAAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: DVRHGLCYPHSSHARLHFSGTEW*YISQGP Trigger: GGGGCCTTGGCTTATGTATCACCACTCAGTTCCTGA...AAAGTGCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGGTCTGCATTCTGCAAGTATGGCCGCGTGGTAAAATGTGGATACAGTCTTCGACGGCCGGAGGTTTaGGAAGAAGCCGTAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGSAFCKYGRVVKCGYSLRRPEV*EEAVGA Trigger: TGCGCCTACGGCTTCTTCGCAAACCTCCGGCCGTCG...AAGACTGTATCCACATTTTACCACGCGGCCATACTTGCAGAATGCAGACCCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | ACTGAAACCAGAATGAGGTGGCCGGGGCAAGTGCTGACAGAACGTGTCTGTCGATCTGCACAGTGTCCATaGCATACACTGCAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TETRMRWPGQVLTERVCRSAQCP*HTLQQQ Trigger: TTGCTGCTGCAGTGTATGTCATGGACACTGTGCAGA...TCGACAGACACGTTCTGTCAGCACTTGCCCCGGCCACCTCATTCTGGTTTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CCA 90 bp | GACACTTCGCAATCACAATGTTTCTTCTTGTTTCTGGGCAACCAACTTCTTATACCGCCGCCGCTCGTCTaGACACCCTGGCTGGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: DTSQSQCFFLFLGNQLLIPPPLV*TPWLAR Trigger: ACGTGCCAGCCAGGGTGTCCAGACGAGCGGCGGCGG...TATAAGAAGTTGGTTGCCCAGAAACAAGAAGAAACATTGTGATTGCGAAGTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGAACTTGAGCCAGGGTCTTCCACACACTTGTCAAGCTTCAGTTTTGCAACTTGGGGGCTGGAGCTaGGATCTTCCTGCTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CWNLSQGLPHTCQASVLQLGGWS*DLPAFC Trigger: GCAGAAAGCAGGAAGATCCCAGCTCCAGCCCCCAAG...TTGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | CACTTGTCAAGCTTCAGTTTTGCAATCTCAGTATTGAGAATACCGTGCAGCTACAGCACCCAGCAAGGTTaGAACGGCCTCCACACCGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLSSFSFAISVLRIPCSYSTQQG*NGLHTA Trigger: GGCGGTGTGGAGGCCGTTTCAACCTTGCTGGGTGCT...GTAGCTGCACGGTATTCTCAATACTGAGATTGCAAAACTGAAGCTTGACAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR GCA 90 bp | GACGTACGCCATGGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTGCACTTTAACCACAGAGATGGCTaGGAAGTAACTGGCGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: DVRHGLCYPHSSHARLHFNHRDG*EVTGVN Trigger: ATTTACGCCAGTTACTTCGCAGCCATCTCTGTGGTT...AAAGTGCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | CTAGGGTCTGCATTCTGCAAGTATGGCCGCGTGGTAAAATGTGGATACAGTCTTCCACGACAATCAGAGTaGGCAGAGTCTGCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGSAFCKYGRVVKCGYSLPRQSE*AESAMP Trigger: TGGCATTGCAGACTCTGCTCACTCTGATTGTCGTGG...AAGACTGTATCCACATTTTACCACGCGGCCATACTTGCAGAATGCAGACCCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGAACTTGAGCCAGGGTCTTCCACACACTTGTCAAGCTTCAGTTTTGCAATCAGGAACTGAGTGGTaGTACATAAGCCAAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: CWNLSQGLPHTCQASVLQSGTEW*YISQGP Trigger: GGGGCCTTGGCTTATGTATCACCACTCAGTTCCTGA...TTGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | CACTTGTCAAGCTTCAGTTTTGCAATCTCAGTATTGAGAATACCGTGCAGCTACGCTTGGGCTCCTCCTTaGGGCCGTTCACTCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: HLSSFSFAISVLRIPCSYAWAPP*GRSLHD Trigger: GTCATGGAGTGAACGGCCTCAAGGAGGAGCCCAAGC...GTAGCTGCACGGTATTCTCAATACTGAGATTGCAAAACTGAAGCTTGACAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159230.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAAACCAGAATGAGGTGGCCGGGGCAAGTGCTGACAGAACGTGTCTGTCGACTTTATATAGCCAACTaGAAACACAGCACTAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TETRMRWPGQVLTERVCRLYIAN*KHSTST Trigger: GGTGCTAGTGCTGTGTTTGCAGTTGGCTATATAAAG...TCGACAGACACGTTCTGTCAGCACTTGCCCCGGCCACCTCATTCTGGTTTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGAACTTGAGCCAGGGTCTTCCACACACTTGTCAAGCTTCAGTTTTGCAAACCGGAGGTAGTCTGTaGCAAGGAACACGGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: CWNLSQGLPHTCQASVLQTGGSL*QGTRET Trigger: TGTTTCCCGTGTTCCTTGCCACAGACTACCTCCGGT...TTGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGAACTTGAGCCAGGGTCTTCCACACACTTGTCAAGCTTCAGTTTTGCAAGAAGAGGCTCTTCTGTaGCATAGGCAGAAACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CWNLSQGLPHTCQASVLQEEALL*HRQKPG Trigger: GCCTGGTTTCTGCCTATGCCACAGAAGAGCCTCTTC...TTGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CCA 90 bp | CACTTGTCAAGCTTCAGTTTTGCAATCTCAGTATTGAGAATACCGTGCAGCTACTGGAGGCTTGGGGGCTaGAGCTGGGATCTTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLSSFSFAISVLRIPCSYWRLGG*SWDLPA Trigger: AGCAGGAAGATCCCAGCTCCAGCCCCCAAGCCTCCA...GTAGCTGCACGGTATTCTCAATACTGAGATTGCAAAACTGAAGCTTGACAAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR CAA 72 bp | TGCACGTTTGCACTTTGGTCTTTCCAGTGCTGGAACTaGAGCCAGGGTCTTCCACACACTTGTCAAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: CTFALWSFQCWN*SQGLPHTCQAS Trigger: TGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCACTGGAAAGACCAAAGTGCAAACGTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGTATAGGAGGAAAGAGACCAAAATGTAAGACTGGAGACTGCTACTCTGACATCAGGCTGAGTCCCTaGAGCAGGATGACAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GSIGGKRPKCKTGDCYSDIRLSP*SRMTGL Trigger: CAAGCCTGTCATCCTGCTGCAGGGACTCAGCCTGAT...GTCAGAGTAGCAGTCTCCAGTCTTACATTTTGGTCTCTTTCCTCCTATACTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR GCA 90 bp | ACTGAAACCAGAATGAGGTGGCCGGGGCAAGTGCTGACAGAACGTGTCTGTCGAAGCAATCTGGAAAGTTaGTATGGTGATGAGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TETRMRWPGQVLTERVCRSNLES*YGDEYH Trigger: ATGGTACTCATCACCATAGCAACTTTCCAGATTGCT...TCGACAGACACGTTCTGTCAGCACTTGCCCCGGCCACCTCATTCTGGTTTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGGTCTGCATTCTGCAAGTATGGCCGCGTGGTAAAATGTGGATACAGTCTTAGAGTGAGCAGAGTCTaGAATGCCAGGGCAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGSAFCKYGRVVKCGYSLRVSRV*NARAMK Trigger: CTTCATTGCCCTGGCATTGCAGACTCTGCTCACTCT...AAGACTGTATCCACATTTTACCACGCGGCCATACTTGCAGAATGCAGACCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGGTCTGCATTCTGCAAGTATGGCCGCGTGGTAAAATGTGGATACAGTCTTTCCCATCCAGGAAGATaGTTAGCTGCTGGGGTATCA | + |
|
Preference number: 4 (lower is better) Translates to: LGSAFCKYGRVVKCGYSLSHPGR*LAAGVS Trigger: TGATACCCCAGCAGCTAACCATCTTCCTGGATGGGA...AAGACTGTATCCACATTTTACCACGCGGCCATACTTGCAGAATGCAGACCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044021.12 |
||
| CDS-3UTR TCA 90 bp | CACTTGTCAAGCTTCAGTTTTGCAATCTCAGTATTGAGAATACCGTGCAGCTACGGGCATAGAGCAGCATaGACCACGTCACAATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HLSSFSFAISVLRIPCSYGHRAA*TTSQSG Trigger: GCCTGATTGTGACGTGGTTCATGCTGCTCTATGCCC...GTAGCTGCACGGTATTCTCAATACTGAGATTGCAAAACTGAAGCTTGACAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGAACTTGAGCCAGGGTCTTCCACACACTTGTCAAGCTTCAGTTTTGCAAGTCCATGACATACACTaGAGCAGCAATCAGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CWNLSQGLPHTCQASVLQVHDIH*SSNQER Trigger: TCTCTCCTGATTGCTGCTGCAGTGTATGTCATGGAC...TTGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CCA 90 bp | CACTTGTCAAGCTTCAGTTTTGCAATCTCAGTATTGAGAATACCGTGCAGCTACAGTAGGCGATTTCGGTaGCTGTGGCGATGCCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLSSFSFAISVLRIPCSYSRRFR*LWRCRR Trigger: TCTACGGCATCGCCACAGCCACCGAAATCGCCTACT...GTAGCTGCACGGTATTCTCAATACTGAGATTGCAAAACTGAAGCTTGACAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | GGAAGTATAGGAGGAAAGAGACCAAAATGTAAGACTGGAGACTGCTACTCTGACAAGAATTCCAAGAACTaGATGGCCAGCAGTCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSIGGKRPKCKTGDCYSDKNSKN*MASSPW Trigger: CCAGGGACTGCTGGCCATTCAGTTCTTGGAATTCTT...GTCAGAGTAGCAGTCTCCAGTCTTACATTTTGGTCTCTTTCCTCCTATACTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGGAACTTGAGCCAGGGTCTTCCACACACTTGTCAAGCTTCAGTTTTGCAATTCTACAGTAGCTTGTaGCTTTCTGGTACATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CWNLSQGLPHTCQASVLQFYSSL*LSGTCP Trigger: TGGGCATGTACCAGAAAGTCACAAGCTACTGTAGAA...TTGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | GACACTTCGCAATCACAATGTTTCTTCTTGTTTCTGGGCAACCAACTTCTTATAGTTCAAGCTGAACAGTaGCCAGCCCACCACGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DTSQSQCFFLFLGNQLLIVQAEQ*PAHHGD Trigger: GTCTCCGTGGTGGGCTGGTCACTGTTCAGCTTGAAC...TATAAGAAGTTGGTTGCCCAGAAACAAGAAGAAACATTGTGATTGCGAAGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTCTTCTTGTTTCTGGGCAACCAACTTCTTATAGAGCAACAAGGAAGTATACATTCCACAGGACTCTaGACACCCGCAGCCGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CFFLFLGNQLLIEQQGSIHSTGL*TPAAGL Trigger: CAGACCGGCTGCGGGTGTTCAGAGTCCTGTGGAATG...TATACTTCCTTGTTGCTCTATAAGAAGTTGGTTGCCCAGAAACAAGAAGAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR GCA 90 bp | AACGTTTCCAAAAATATACAACGGTCAAATTGGGAAGAAGCACTAACTCTCATACGACGGCCGGAGGTTTaGGAAGAAGCCGTAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: NVSKNIQRSNWEEALTLIRRPEV*EEAVGA Trigger: TGCGCCTACGGCTTCTTCGCAAACCTCCGGCCGTCG...TATGAGAGTTAGTGCTTCTTCCCAATTTGACCGTTGTATATTTTTGGAAACGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGTATAGGAGGAAAGAGACCAAAATGTAAGACTGGAGACTGCTACTCTGACAGAGTGAGCAGAGTCTaGAATGCCAGGGCAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSIGGKRPKCKTGDCYSDRVSRV*NARAMK Trigger: CTTCATTGCCCTGGCATTGCAGACTCTGCTCACTCT...GTCAGAGTAGCAGTCTCCAGTCTTACATTTTGGTCTCTTTCCTCCTATACTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CCA 90 bp | TGCTGGAACTTGAGCCAGGGTCTTCCACACACTTGTCAAGCTTCAGTTTTGCAAAGGTTCGCAGCAATCTaGAAAGTTGCTATGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: CWNLSQGLPHTCQASVLQRFAAI*KVAMVM Trigger: CATCACCATAGCAACTTTCCAGATTGCTGCGAACCT...TTGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR CAA 72 bp | CCAGTGCTGGAACTTGAGCCAGGGTCTTCCACACACTaGTCAAGCTTCAGTTTTGCAATCTCAGTATTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PVLELEPGSSTH*SSFSFAISVLR Trigger: TCTCAATACTGAGATTGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | AACGTTTCCAAAAATATACAACGGTCAAATTGGGAAGAAGCACTAACTCTCATAGTTCAAGCTGAACAGTaGCCAGCCCACCACGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NVSKNIQRSNWEEALTLIVQAEQ*PAHHGD Trigger: GTCTCCGTGGTGGGCTGGTCACTGTTCAGCTTGAAC...TATGAGAGTTAGTGCTTCTTCCCAATTTGACCGTTGTATATTTTTGGAAACGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGGAACTTGAGCCAGGGTCTTCCACACACTTGTCAAGCTTCAGTTTTGCAAAGCAATCTGGAAAGTTaGTATGGTGATGAGTACCAT | + |
|
Preference number: 4 (lower is better) Translates to: CWNLSQGLPHTCQASVLQSNLES*YGDEYH Trigger: ATGGTACTCATCACCATAGCAACTTTCCAGATTGCT...TTGCAAAACTGAAGCTTGACAAGTGTGTGGAAGACCCTGGCTCAAGTTCCAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR GCA 90 bp | GGAAGTATAGGAGGAAAGAGACCAAAATGTAAGACTGGAGACTGCTACTCTGACAACCACAGAGATGGCTaGGAAGTAACTGGCGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GSIGGKRPKCKTGDCYSDNHRDG*EVTGVN Trigger: ATTTACGCCAGTTACTTCGCAGCCATCTCTGTGGTT...GTCAGAGTAGCAGTCTCCAGTCTTACATTTTGGTCTCTTTCCTCCTATACTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CCA 90 bp | GACACTTCGCAATCACAATGTTTCTTCTTGTTTCTGGGCAACCAACTTCTTATAGAAGAGGCTCTTCTGTaGCATAGGCAGAAACCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DTSQSQCFFLFLGNQLLIEEALL*HRQKPG Trigger: GCCTGGTTTCTGCCTATGCCACAGAAGAGCCTCTTC...TATAAGAAGTTGGTTGCCCAGAAACAAGAAGAAACATTGTGATTGCGAAGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | ACCTTTTCAGTTGCAATTAAGAGTCCTTCATACATAACTATTACAGACGAGCAAGGGCATAGAGCAGCATaGACCACGTCACAATCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TFSVAIKSPSYITITDEQGHRAA*TTSQSG Trigger: GCCTGATTGTGACGTGGTTCATGCTGCTCTATGCCC...TTGCTCGTCTGTAATAGTTATGTATGAAGGACTCTTAATTGCAACTGAAAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | TGTTTCTTCTTGTTTCTGGGCAACCAACTTCTTATAGAGCAACAAGGAAGTATACGTAACGTTCCATGCTaGGGTTCGCAGCAATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CFFLFLGNQLLIEQQGSIRNVPC*GSQQSG Trigger: TCCAGATTGCTGCGAACCTCAGCATGGAACGTTACG...TATACTTCCTTGTTGCTCTATAAGAAGTTGGTTGCCCAGAAACAAGAAGAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR GCA 90 bp | ACCTTTTCAGTTGCAATTAAGAGTCCTTCATACATAACTATTACAGACGAGCAAATCAGGCTGAGTCCCTaGAGCAGGATGACAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TFSVAIKSPSYITITDEQIRLSP*SRMTGL Trigger: CAAGCCTGTCATCCTGCTGCAGGGACTCAGCCTGAT...TTGCTCGTCTGTAATAGTTATGTATGAAGGACTCTTAATTGCAACTGAAAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| 3UTR CAA 72 bp | ACACACTTGTCAAGCTTCAGTTTTGCAATCTCAGTATaGAGAATACCGTGCAGCTACGTCCGTCTTAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: THLSSFSFAISV*RIPCSYVRLNK Trigger: CTTGTTAAGACGGACGTAGCTGCACGGTATTCTCAATACTGAGATTGCAAAACTGAAGCTTGACAAGTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | ACCTTTTCAGTTGCAATTAAGAGTCCTTCATACATAACTATTACAGACGAGCAACGTAACGTTCCATGCTaGGGTTCGCAGCAATCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TFSVAIKSPSYITITDEQRNVPC*GSQQSG Trigger: TCCAGATTGCTGCGAACCTCAGCATGGAACGTTACG...TTGCTCGTCTGTAATAGTTATGTATGAAGGACTCTTAATTGCAACTGAAAAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | AACGTTTCCAAAAATATACAACGGTCAAATTGGGAAGAAGCACTAACTCTCATACCACGACAATCAGAGTaGGCAGAGTCTGCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NVSKNIQRSNWEEALTLIPRQSE*AESAMP Trigger: TGGCATTGCAGACTCTGCTCACTCTGATTGTCGTGG...TATGAGAGTTAGTGCTTCTTCCCAATTTGACCGTTGTATATTTTTGGAAACGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTCTTCTTGTTTCTGGGCAACCAACTTCTTATAGAGCAACAAGGAAGTATAGAGCAGAGTCTGCAATaGCAGGGCAATGAAGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CFFLFLGNQLLIEQQGSIEQSLQ*QGNEGV Trigger: AACACCTTCATTGCCCTGGCATTGCAGACTCTGCTC...TATACTTCCTTGTTGCTCTATAAGAAGTTGGTTGCCCAGAAACAAGAAGAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CCA 90 bp | ACCTTTTCAGTTGCAATTAAGAGTCCTTCATACATAACTATTACAGACGAGCAAACCGGAGGTAGTCTGTaGCAAGGAACACGGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: TFSVAIKSPSYITITDEQTGGSL*QGTRET Trigger: TGTTTCCCGTGTTCCTTGCCACAGACTACCTCCGGT...TTGCTCGTCTGTAATAGTTATGTATGAAGGACTCTTAATTGCAACTGAAAAGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR TCA 90 bp | AACGTTTCCAAAAATATACAACGGTCAAATTGGGAAGAAGCACTAACTCTCATATCTGCACAGTGTCCATaGCATACACTGCAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: NVSKNIQRSNWEEALTLISAQCP*HTLQQQ Trigger: TTGCTGCTGCAGTGTATGTCATGGACACTGTGCAGA...TATGAGAGTTAGTGCTTCTTCCCAATTTGACCGTTGTATATTTTTGGAAACGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CCA 90 bp | ACCTTTTCAGTTGCAATTAAGAGTCCTTCATACATAACTATTACAGACGAGCAAATTCCAAGAACTGAATaGCCAGCAGTCCCTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TFSVAIKSPSYITITDEQIPRTE*PAVPGH Trigger: ATGCCCAGGGACTGCTGGCCATTCAGTTCTTGGAAT...TTGCTCGTCTGTAATAGTTATGTATGAAGGACTCTTAATTGCAACTGAAAAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR GCA 90 bp | AACGTTTCCAAAAATATACAACGGTCAAATTGGGAAGAAGCACTAACTCTCATAGTCCATGACATACACTaGAGCAGCAATCAGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: NVSKNIQRSNWEEALTLIVHDIH*SSNQER Trigger: TCTCTCCTGATTGCTGCTGCAGTGTATGTCATGGAC...TATGAGAGTTAGTGCTTCTTCCCAATTTGACCGTTGTATATTTTTGGAAACGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS GCA 90 bp | TCCCAGAAGGTAGGGCGTGAGGAACGGCTCCGACGGCCGGAGGTTTaGGAAGAAGCCGTAGGCGCAGAGCAGCGCGGTCGGCAGGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: SQKVGREERLRRPEV*EEAVGAEQRGRQEP Trigger: TGGTTCCTGCCGACCGCGCTGCTCTGCGCCTACGGCTTCTTCGCAAACCTCCGGCCGTCGGAGCCGTTCCTCACGCCCTACCTTCTGGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 ENSMUST00000169394.2 |
||
| CDS-3UTR CAA 90 bp | CGTGTCTGTCGAGGCTTGTACCATCCTGTGGCTCCTGAAGCCCTGGTCCCACCATTAGGACGTGGAGGCTaGGGGGCTGGAGCTGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RVCRGLYHPVAPEALVPPLGRGG*GAGAGI Trigger: GATCCCAGCTCCAGCCCCCAAGCCTCCACGTCCTAA...TGGTGGGACCAGGGCTTCAGGAGCCACAGGATGGTACAAGCCTCGACAGACACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CAA 90 bp | GACGTACGCCATGGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTGCACTTTCCGACGGCCGGAGGTTaGCGAAGAAGCCGTAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: DVRHGLCYPHSSHARLHFPTAGG*RRSRRR Trigger: GCGCCTACGGCTTCTTCGCAAACCTCCGGCCGTCGG...AAAGTGCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS TCA 90 bp | GAGGGCGGGAGGAATAACACATCAGGAAGTCATTCCACAGGACTCTaGACACCCGCAGCCGGTCTGGCTTGGGCTCCTCCTGTCTCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: EGGRNNTSGSHSTGL*TPAAGLAWAPPVSR Trigger: CCGAGAGACAGGAGGAGCCCAAGCCAGACCGGCTGCGGGTGTTCAGAGTCCTGTGGAATGACTTCCTGATGTGTTATTCCTCCCGCCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169394.2 |
||
| CDS-3UTR CAA 90 bp | AGGAAGACGTACGCCATGGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTGCTTAGGACGTGGAGGCTaGGGGGCTGGAGCTGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: RKTYAMASVTLTPPMHVCLGRGG*GAGAGI Trigger: GATCCCAGCTCCAGCCCCCAAGCCTCCACGTCCTAA...GCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGTCTTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS TCA 90 bp | GAGGGCGGGAGGAATAACACATCAGGAAGTCATTCCACAGGACTCTaGACACCCGCAGCCGGTCTGGCTTGGGCTCCTCCGGTTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: EGGRNNTSGSHSTGL*TPAAGLAWAPPVLP Trigger: TGGAAGAACCGGAGGAGCCCAAGCCAGACCGGCTGCGGGTGTTCAGAGTCCTGTGGAATGACTTCCTGATGTGTTATTCCTCCCGCCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044021.12 |
||
| CDS GCA 90 bp | ACGTTCAAGCTGAACAGTGACCAGCCCACCACGGAGACGAGGATCTaGCCTAGGACGGAGCCCACTGTAAAGCCCACCAAGGTGGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: TFKLNSDQPTTETRI*PRTEPTVKPTKVAL Trigger: AAGTGCCACCTTGGTGGGCTTTACAGTGGGCTCCGTCCTAGGGCAGATCCTCGTCTCCGTGGTGGGCTGGTCACTGTTCAGCTTGAACGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS CCA 90 bp | CATCAGGAAGTCATTCCACAGGACTCTGAACACCCGCAGCCGGTCTaGCTTGGGCTCCTCCTTGAGGCCGTTCACTCCATGACAGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: HQEVIPQDSEHPQPV*LGLLLEAVHSMTGG Trigger: TCCTCCTGTCATGGAGTGAACGGCCTCAAGGAGGAGCCCAAGCCAGACCGGCTGCGGGTGTTCAGAGTCCTGTGGAATGACTTCCTGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159230.8 |
||
| CDS CCA 90 bp | CATCAGGAAGTCATTCCACAGGACTCTGAACACCCGCAGCCGGTCTaGCTTGGGCTCCTCCTGTCTCTCGGTCAAGTTCTTGTCGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HQEVIPQDSEHPQPV*LGLLLSLGQVLVGS Trigger: GGACCCGACAAGAACTTGACCGAGAGACAGGAGGAGCCCAAGCCAGACCGGCTGCGGGTGTTCAGAGTCCTGTGGAATGACTTCCTGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169394.2 |
||
| CDS GCA 90 bp | AAGCCAAGGCCCCTGGCATCCACGACAATCAGAGTGAGCAGAGTCTaGAATGCCAGGGCAATGAAGGTGTTCACGCCGAACACAAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: KPRPLASTTIRVSRV*NARAMKVFTPNTRA Trigger: CGCCCTTGTGTTCGGCGTGAACACCTTCATTGCCCTGGCATTGCAGACTCTGCTCACTCTGATTGTCGTGGATGCCAGGGGCCTTGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 ENSMUST00000169394.2 |
||
| CDS GCA 90 bp | AAGGCCCCTGGCATCCACGACAATCAGAGTGAGCAGAGTCTGCAATaGCAGGGCAATGAAGGTGTTCACGCCGAACACAAGGGCGTAACG | + |
|
Preference number: 5 (lower is better) Translates to: KAPGIHDNQSEQSLQ*QGNEGVHAEHKGVT Trigger: CGTTACGCCCTTGTGTTCGGCGTGAACACCTTCATTGCCCTGGCATTGCAGACTCTGCTCACTCTGATTGTCGTGGATGCCAGGGGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 ENSMUST00000169394.2 |
||
| CDS GCA 90 bp | CAGTATAGATATAGGAGTAGTAGGCGATTTCGGTGGCTGTGGCGATaGCGTAGAAGAATTCCAAGAACTGAATGGCCAGCAGTCCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QYRYRSSRRFRWLWR*RRRIPRTEWPAVPG Trigger: CCCAGGGACTGCTGGCCATTCAGTTCTTGGAATTCTTCTACGGCATCGCCACAGCCACCGAAATCGCCTACTACTCCTATATCTATACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CAA 90 bp | CGTGTCTGTCGAGGCTTGTACCATCCTGTGGCTCCTGAAGCCCTGGTCCCACCATCATTTCTCCCCAAGTaGACCAAGATAGCTTTATAT | + |
|
Preference number: 5 (lower is better) Translates to: RVCRGLYHPVAPEALVPPSFLPK*TKIALY Trigger: ATATAAAGCTATCTTGGTCAACTTGGGGAGAAATGA...TGGTGGGACCAGGGCTTCAGGAGCCACAGGATGGTACAAGCCTCGACAGACACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS GCA 90 bp | TGCATAGCACACCCAGATGCTCTGCACAGTGTCCATGACATACACTaGAGCAGCAATCAGGAGAGAACACAGGAACAACGTCATTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CIAHPDALHSVHDIH*SSNQERTQEQRHFS Trigger: GGAGAAATGACGTTGTTCCTGTGTTCTCTCCTGATTGCTGCTGCAGTGTATGTCATGGACACTGTGCAGAGCATCTGGGTGTGCTATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 ENSMUST00000169394.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTTTCAGTTGCAATTAAGAGTCCTTCATACATAACTATTACAGACGAGCAACCGACGGCCGGAGGTTaGCGAAGAAGCCGTAGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TFSVAIKSPSYITITDEQPTAGG*RRSRRR Trigger: GCGCCTACGGCTTCTTCGCAAACCTCCGGCCGTCGG...TTGCTCGTCTGTAATAGTTATGTATGAAGGACTCTTAATTGCAACTGAAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CAA 90 bp | GACGTACGCCATGGCCTCTGTTACCCTCACTCCTCCCATGCACGTTTGCACTTTTCATTTCTCCCCAAGTaGACCAAGATAGCTTTATAT | + |
|
Preference number: 5 (lower is better) Translates to: DVRHGLCYPHSSHARLHFSFLPK*TKIALY Trigger: ATATAAAGCTATCTTGGTCAACTTGGGGAGAAATGA...AAAGTGCAAACGTGCATGGGAGGAGTGAGGGTAACAGAGGCCATGGCGTACGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CAA 90 bp | GACACTTCGCAATCACAATGTTTCTTCTTGTTTCTGGGCAACCAACTTCTTATACGCGTAGTTCACCACTaGGAAATAGCCGCAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DTSQSQCFFLFLGNQLLIRVVHH*EIAAGG Trigger: TCCACCTGCGGCTATTTCCAAGTGGTGAACTACGCG...TATAAGAAGTTGGTTGCCCAGAAACAAGAAGAAACATTGTGATTGCGAAGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS GCA 90 bp | TATGGTGATGAGTACCATGTAGATGATTCTGAAGACAACATAGGATaGATAGCACACCCAGATGCTCTGCACAGTGTCCATGACATACAC | + |
|
Preference number: 5 (lower is better) Translates to: YGDEYHVDDSEDNIG*IAHPDALHSVHDIH Trigger: GTGTATGTCATGGACACTGTGCAGAGCATCTGGGTGTGCTATGCATCCTATGTTGTCTTCAGAATCATCTACATGGTACTCATCACCATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 ENSMUST00000169394.2 |
||
| CDS-3UTR CAA 90 bp | ACCTTTTCAGTTGCAATTAAGAGTCCTTCATACATAACTATTACAGACGAGCAACGCGTAGTTCACCACTaGGAAATAGCCGCAGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TFSVAIKSPSYITITDEQRVVHH*EIAAGG Trigger: TCCACCTGCGGCTATTTCCAAGTGGTGAACTACGCG...TTGCTCGTCTGTAATAGTTATGTATGAAGGACTCTTAATTGCAACTGAAAAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS-3UTR CAA 90 bp | GTTTCCAAAAATATACAACGGTCAAATTGGGAAGAAGCACTAACTCTCATACCGAATTTAGAGGGATTTTaGACTCAATGTCCTCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: VSKNIQRSNWEEALTLIPNLEGF*TQCPPI Trigger: GATGGGAGGACATTGAGTCAAAAATCCCTCTAAATT...CGGTATGAGAGTTAGTGCTTCTTCCCAATTTGACCGTTGTATATTTTTGGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044021.12 |
||
| CDS GCA 72 bp | CTGAACAGTGACCAGCCCACCACGGAGACGAGGATCTaGCCTAGGACGGAGCCCACTGTAAAGCCCACCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LNSDQPTTETRI*PRTEPTVKPTK Trigger: CTTGGTGGGCTTTACAGTGGGCTCCGTCCTAGGGCAGATCCTCGTCTCCGTGGTGGGCTGGTCACTGTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS CAA 72 bp | CACCTTCTCCCACAATCCCTGCGCGTAGTTCACCACTaGGAAATAGCCGCAGGTGGACAGGGCCCACCACAC | + |
|
Preference number: 6 (lower is better) Translates to: HLLPQSLRVVHH*EIAAGGQGPPH Trigger: GTGTGGTGGGCCCTGTCCACCTGCGGCTATTTCCAAGTGGTGAACTACGCGCAGGGATTGTGGGAGAAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 ENSMUST00000169394.2 |
||
| CDS CAA 90 bp | AGAAGGCATCACCTTCTCCCACAATCCCTGCGCGTAGTTCACCACTaGGAAATAGCCGCAGGTGGACAGGGCCCACCACACGGACCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRHHLLPQSLRVVHH*EIAAGGQGPPHGPA Trigger: TGCTGGTCCGTGTGGTGGGCCCTGTCCACCTGCGGCTATTTCCAAGTGGTGAACTACGCGCAGGGATTGTGGGAGAAGGTGATGCCTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 ENSMUST00000169394.2 |
||
| CDS CAA 90 bp | AGGAAGTCATTCCACAGGACTCTGAACACCCGCAGCCGGTCTGGCTaGGGCTCCTCCTGTCTCTCGGTCAAGTTCTTGTCGGGTCCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RKSFHRTLNTRSRSG*GSSCLSVKFLSGPR Trigger: TCTGGGACCCGACAAGAACTTGACCGAGAGACAGGAGGAGCCCAAGCCAGACCGGCTGCGGGTGTTCAGAGTCCTGTGGAATGACTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169394.2 |
||
| CDS CCA 72 bp | GTCATTCCACAGGACTCTGAACACCCGCAGCCGGTCTaGCTTGGGCTCCTCCTGTCTCTCGGTCAAGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VIPQDSEHPQPV*LGLLLSLGQVL Trigger: AAGAACTTGACCGAGAGACAGGAGGAGCCCAAGCCAGACCGGCTGCGGGTGTTCAGAGTCCTGTGGAATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169394.2 |
||
| CDS TCA 72 bp | AGGAATAACACATCAGGAAGTCATTCCACAGGACTCTaGACACCCGCAGCCGGTCTGGCTTGGGCTCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: RNNTSGSHSTGL*TPAAGLAWAPP Trigger: CGGAGGAGCCCAAGCCAGACCGGCTGCGGGTGTTCAGAGTCCTGTGGAATGACTTCCTGATGTGTTATTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044021.12 |
||
| CDS GCA 72 bp | CCCCTGGCATCCACGACAATCAGAGTGAGCAGAGTCTaGAATGCCAGGGCAATGAAGGTGTTCACGCCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: PLASTTIRVSRV*NARAMKVFTPN Trigger: GTTCGGCGTGAACACCTTCATTGCCCTGGCATTGCAGACTCTGCTCACTCTGATTGTCGTGGATGCCAGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 ENSMUST00000169394.2 |
||
| CDS TCA 72 bp | GCCAACTGCAAACACAGCACTAGCACCCAGCAAGGTTaGAACGGCCTCCACACCGCCATTGTAGATGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ANCKHSTSTQQG*NGLHTAIVDVS Trigger: GCTGACATCTACAATGGCGGTGTGGAGGCCGTTTCAACCTTGCTGGGTGCTAGTGCTGTGTTTGCAGTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 ENSMUST00000169394.2 |
||
| CDS TCA 72 bp | AGGAATAACACATCAGGAAGTCATTCCACAGGACTCTaGACACCCGCAGCCGGTCTGGCTTGGGCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: RNNTSGSHSTGL*TPAAGLAWAPP Trigger: AGGAGGAGCCCAAGCCAGACCGGCTGCGGGTGTTCAGAGTCCTGTGGAATGACTTCCTGATGTGTTATTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000159230.8 ENSMUST00000169394.2 |
||
| CDS GCA 72 bp | GGCATCCACGACAATCAGAGTGAGCAGAGTCTGCAATaGCAGGGCAATGAAGGTGTTCACGCCGAACACAAG | + |
|
Preference number: 6 (lower is better) Translates to: GIHDNQSEQSLQ*QGNEGVHAEHK Trigger: CTTGTGTTCGGCGTGAACACCTTCATTGCCCTGGCATTGCAGACTCTGCTCACTCTGATTGTCGTGGATGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 ENSMUST00000169394.2 |
||
| CDS CAA 90 bp | AGGAAGATGGTTAGCTGCTGGGGTATCAGTAACGATGCCACCGTTTaGTACCTTGAGGCCGTTCACTCCATGACAGGAGGAAGGAATGTG | + |
|
Preference number: 6 (lower is better) Translates to: RKMVSCWGISNDATV*YLEAVHSMTGGRNV Trigger: CACATTCCTTCCTCCTGTCATGGAGTGAACGGCCTCAAGGTACAAAACGGTGGCATCGTTACTGATACCCCAGCAGCTAACCATCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044021.12 |
||
| CDS GCA 72 bp | CACCCAGATGCTCTGCACAGTGTCCATGACATACACTaGAGCAGCAATCAGGAGAGAACACAGGAACAACGT | + |
|
Preference number: 6 (lower is better) Translates to: HPDALHSVHDIH*SSNQERTQEQR Trigger: ACGTTGTTCCTGTGTTCTCTCCTGATTGCTGCTGCAGTGTATGTCATGGACACTGTGCAGAGCATCTGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 ENSMUST00000169394.2 |
||
| CDS CCA 72 bp | GGGATTTTTGACTCAATGTCCTCCCATCCAGGAAGATaGTTAGCTGCTGGGGTATCAGTAACGATGCCACCG | + |
|
Preference number: 6 (lower is better) Translates to: GIFDSMSSHPGR*LAAGVSVTMPP Trigger: CGGTGGCATCGTTACTGATACCCCAGCAGCTAACCATCTTCCTGGATGGGAGGACATTGAGTCAAAAATCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044021.12 |
||
| CDS GCA 72 bp | TATAGGAGTAGTAGGCGATTTCGGTGGCTGTGGCGATaGCGTAGAAGAATTCCAAGAACTGAATGGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: YRSSRRFRWLWR*RRRIPRTEWPA Trigger: TGCTGGCCATTCAGTTCTTGGAATTCTTCTACGGCATCGCCACAGCCACCGAAATCGCCTACTACTCCTATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||
| CDS CCA 72 bp | CTCAATGTCCTCCCATCCAGGAAGATGGTTAGCTGCTaGGGTATCAGTAACGATGCCACCGTTTTGTACCTT | + |
|
Preference number: 6 (lower is better) Translates to: LNVLPSRKMVSC*GISNDATVLYL Trigger: AAGGTACAAAACGGTGGCATCGTTACTGATACCCCAGCAGCTAACCATCTTCCTGGATGGGAGGACATTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044021.12 |
||
| CDS GCA 72 bp | GAGTACCATGTAGATGATTCTGAAGACAACATAGGATaGATAGCACACCCAGATGCTCTGCACAGTGTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: EYHVDDSEDNIG*IAHPDALHSVH Trigger: ATGGACACTGTGCAGAGCATCTGGGTGTGCTATGCATCCTATGTTGTCTTCAGAATCATCTACATGGTACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 ENSMUST00000169394.2 |
||
| CDS CCA 72 bp | TATAGATATAGGAGTAGTAGGCGATTTCGGTGGCTGTaGCGATGCCGTAGAAGAATTCCAAGAACTGAATGG | + |
|
Preference number: 6 (lower is better) Translates to: YRYRSSRRFRWL*RCRRRIPRTEW Trigger: CCATTCAGTTCTTGGAATTCTTCTACGGCATCGCCACAGCCACCGAAATCGCCTACTACTCCTATATCTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044021.12 ENSMUST00000159230.8 |
||