Pregenerated sensors for SLC19A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001436Ensembl transcript IDs: ENSMUST00000105410.10, ENSMUST00000130703.8, ENSMUST00000131031.2, ENSMUST00000132984.2, ENSMUST00000133059.8, ENSMUST00000136150.8, ENSMUST00000136925.8, ENSMUST00000144234.8
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATGGCTCAGAGGAGGAGTCCTGGGTCCTGCTGAGGCCTTACGCCTaGGGGCCCAGGACCAGGCTTCTTGAAGCAAGGAGCCTAAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: NGSEEESWVLLRPYA*GPRTRLLEARSLRQ Trigger: CTGCCTTAGGCTCCTTGCTTCAAGAAGCCTGGTCCTGGGCCCTCAGGCGTAAGGCCTCAGCAGGACCCAGGACTCCTCCTCTGAGCCATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131031.2 |
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| 3UTR GCA 90 bp | GATGCTCCCAGCCGGTTCCTAGTGAGATGCTGGTCTGCTCCTGCATaGGGAAACACCTTCTCCACCTGCCTCCTCACTGGCCCACCAGAC | + |
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Preference number: 1 (lower is better) Translates to: DAPSRFLVRCWSAPA*GNTFSTCLLTGPPD Trigger: GTCTGGTGGGCCAGTGAGGAGGCAGGTGGAGAAGGTGTTTCCGCATGCAGGAGCAGACCAGCATCTCACTAGGAACCGGCTGGGAGCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR CCA 90 bp | CAGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTaGGCTACCTCACTAGCCCTAAGGGGCAGACATGATTTGCCCAGA | + |
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Preference number: 1 (lower is better) Translates to: QATGTLQAQRTLAGI*ATSLALRGRHDLPR Trigger: TCTGGGCAAATCATGTCTGCCCCTTAGGGCTAGTGAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR CCA 90 bp | GGCCCAGGTGAGGACATACAAGGTCTGATGAAGGCTCCTCAGAAATaGCCAACAACTCAGCCAGCCTTGGAGGCCCAGCCAGGGCTCCAA | + |
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Preference number: 1 (lower is better) Translates to: GPGEDIQGLMKAPQK*PTTQPALEAQPGLQ Trigger: TTGGAGCCCTGGCTGGGCCTCCAAGGCTGGCTGAGTTGTTGGCCATTTCTGAGGAGCCTTCATCAGACCTTGTATGTCCTCACCTGGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR CCA 90 bp | AGGGCTGTGCCATCTAGGAACCCTTGGCATGTCAGCACTCCTCCATaGCACACACCAACCTGCAGGCCTATGGCCCAGGGAAACCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: RAVPSRNPWHVSTPP*HTPTCRPMAQGNQR Trigger: CCTTTGGTTTCCCTGGGCCATAGGCCTGCAGGTTGGTGTGTGCCATGGAGGAGTGCTGACATGCCAAGGGTTCCTAGATGGCACAGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR GCA 90 bp | AGGAACCCTTGGCATGTCAGCACTCCTCCATGGCACACACCAACCTaGAGGCCTATGGCCCAGGGAAACCAAAGGCTTTCACAGGTTGCC | + |
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Preference number: 1 (lower is better) Translates to: RNPWHVSTPPWHTPT*RPMAQGNQRLSQVA Trigger: GGCAACCTGTGAAAGCCTTTGGTTTCCCTGGGCCATAGGCCTGCAGGTTGGTGTGTGCCATGGAGGAGTGCTGACATGCCAAGGGTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR GCA 90 bp | CTTTACATGGCAGGACTGCGCCCTCACTTCACGTGTCTCCTCAGATaGTCCCAGCCGGTTCCTAGTGAGATGCTGGTCTGCTCCTGCATG | + |
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Preference number: 1 (lower is better) Translates to: LYMAGLRPHFTCLLR*SQPVPSEMLVCSCM Trigger: CATGCAGGAGCAGACCAGCATCTCACTAGGAACCGGCTGGGAGCATCTGAGGAGACACGTGAAGTGAGGGCGCAGTCCTGCCATGTAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR GCA 90 bp | GTGAGATGCTGGTCTGCTCCTGCATGCGGAAACACCTTCTCCACCTaGCTCCTCACTGGCCCACCAGACTTAACACCAAGTTTCAATGAC | + |
|
Preference number: 1 (lower is better) Translates to: VRCWSAPACGNTFST*LLTGPPDLTPSFND Trigger: GTCATTGAAACTTGGTGTTAAGTCTGGTGGGCCAGTGAGGAGGCAGGTGGAGAAGGTGTTTCCGCATGCAGGAGCAGACCAGCATCTCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR CCA 90 bp | TTAACACCAAGTTTCAATGACAGGGCTGTGCCATCTAGGAACCCTTaGCATGTCAGCACTCCTCCATGGCACACACCAACCTGCAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: LTPSFNDRAVPSRNP*HVSTPPWHTPTCRP Trigger: AGGCCTGCAGGTTGGTGTGTGCCATGGAGGAGTGCTGACATGCCAAGGGTTCCTAGATGGCACAGCCCTGTCATTGAAACTTGGTGTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR CCA 90 bp | GACTGTCCTGGGTTCAGTCTGCAGGAAGTCTGCACTGAGAGATTTTaGCAAGCTGGAGGCAAGTTCAAGCTTTACATGGCAGGACTGCGC | + |
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Preference number: 1 (lower is better) Translates to: DCPGFSLQEVCTERF*QAGGKFKLYMAGLR Trigger: GCGCAGTCCTGCCATGTAAAGCTTGAACTTGCCTCCAGCTTGCCAAAATCTCTCAGTGCAGACTTCCTGCAGACTGAACCCAGGACAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR CCA 90 bp | AAACATCTCCTCCTCTCTGTAAACAAAGCATCAACAAACAGGAAATaGCTCAGAGGAGGAGTCCTGGGTCCTGCTGAGGCCTTACGCCTG | + |
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Preference number: 1 (lower is better) Translates to: KHLLLSVNKASTNRK*LRGGVLGPAEALRL Trigger: CAGGCGTAAGGCCTCAGCAGGACCCAGGACTCCTCCTCTGAGCCATTTCCTGTTTGTTGATGCTTTGTTTACAGAGAGGAGGAGATGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131031.2 |
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| 3UTR TCA 90 bp | GCTCAAGGCCATCAGGTCTTGACGATCACCAATAGGGATGTGACATaGAAGTTAAGGAGCTGTAACCATGCGAAGTCATTGGTCCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: AQGHQVLTITNRDVT*KLRSCNHAKSLVQA Trigger: GGCCTGGACCAATGACTTCGCATGGTTACAGCTCCTTAACTTTCATGTCACATCCCTATTGGTGATCGTCAAGACCTGATGGCCTTGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR GCA 90 bp | AGGACAGACAGACTTGACTGTCCTGGGTTCAGTCTGCAGGAAGTCTaGACTGAGAGATTTTGGCAAGCTGGAGGCAAGTTCAAGCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: RTDRLDCPGFSLQEV*TERFWQAGGKFKLY Trigger: GTAAAGCTTGAACTTGCCTCCAGCTTGCCAAAATCTCTCAGTGCAGACTTCCTGCAGACTGAACCCAGGACAGTCAAGTCTGTCTGTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR CCA 90 bp | TCCCGACAACCACATGGTGGTTATGAAATCATTTATAATGAGATCTaGTGCCCTCTTCTGGTGTGTAAGTATACCTGCAGATGTAATACT | + |
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Preference number: 1 (lower is better) Translates to: SRQPHGGYEIIYNEI*CPLLVCKYTCRCNT Trigger: AGTATTACATCTGCAGGTATACTTACACACCAGAAGAGGGCACCAGATCTCATTATAAATGATTTCATAACCACCATGTGGTTGTCGGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR GCA 90 bp | CGACAACCACATGGTGGTTATGAAATCATTTATAATGAGATCTGGTaGCCTCTTCTGGTGTGTAAGTATACCTGCAGATGTAATACTATA | + |
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Preference number: 1 (lower is better) Translates to: RQPHGGYEIIYNEIW*PLLVCKYTCRCNTI Trigger: TATAGTATTACATCTGCAGGTATACTTACACACCAGAAGAGGGCACCAGATCTCATTATAAATGATTTCATAACCACCATGTGGTTGTCG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGGGCAGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGCCAGGCTGGTTCAGGTaGAGTGCAAACAGGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: LGQATGTLQAQRTLAGIWPGWFR*SANRRG Trigger: GCCCCTCCTGTTTGCACTCCACCTGAACCAGCCTGG...CCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCTGCCCTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAGGAGCCTAGGGCAGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGGGCAGACATGATTTaGCCAGAGCTTCCCAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: ARSLGQATGTLQAQRTLAGADMI*PELPRA Trigger: TGCTCTGGGAAGCTCTGGGCAAATCATGTCTGCCCC...AGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCTGCCCTAGGCTCCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCAGTGGCCTGGCACGTaGTTCACAAAGCCAGGGAGC | + |
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Preference number: 2 (lower is better) Translates to: RQLAPCRLSGPWLASGLPQWPGT*FTKPGS Trigger: GCTCCCTGGCTTTGTGAACCACGTGCCAGGCCACTG...AGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR-3UTR CCA 90 bp | GCAGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACAGACTCGCAGTGGCCTaGCACGTGGTTCACAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: AGNWHPAGSADLGWHLGYRLAVA*HVVHKA Trigger: GGCTTTGTGAACCACGTGCCAGGCCACTGCGAGTCT...GTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR-3UTR TCA 90 bp | GGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCCCTAAGGGGCAGACATaGTTTGCCCAGAGCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: GNWHPAGSADLGWHLGYLPKGQT*FAQSFP Trigger: TGGGAAGCTCTGGGCAAATCATGTCTGCCCCTTAGG...GAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR-3UTR CCA 90 bp | GCCTGGCACGTGGTTCACAAAGCCAGGGAGCTGCCCTTGAGTGTCGGTAGCAGGCCAGGCTGGTTCAGGTaGAGTGCAAACAGGAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: AWHVVHKARELPLSVGSRPGWFR*SANRRG Trigger: GCCCCTCCTGTTTGCACTCCACCTGAACCAGCCTGG...CCTGCTACCGACACTCAAGGGCAGCTCCCTGGCTTTGTGAACCACGTGCCAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCACTAGCATCAGGCCCAGGCTaGTTCAGGTGGAGTGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: TGTLQAQRTLAGIWATSLASGPG*FRWSAN Trigger: GTTTGCACTCCACCTGAACCAGCCTGGGCCTGATGC...TAGTGAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR-3UTR CCA 90 bp | ACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCACTAAGACTCGCAGTGGCCTaGCACGTGGTTCACAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: TGTLQAQRTLAGIWATSLRLAVA*HVVHKA Trigger: GGCTTTGTGAACCACGTGCCAGGCCACTGCGAGTCT...TAGTGAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR-3UTR TCA 90 bp | CTAGGGCAGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCCATTGCTAAAGCATaGAGTAGGCTGGGTTTAGGG | + |
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Preference number: 2 (lower is better) Translates to: LGQATGTLQAQRTLAGIWAIAKA*SRLGLG Trigger: CCCTAAACCCAGCCTACTTCATGCTTTAGCAATGGC...CCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCTGCCCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR-3UTR TCA 90 bp | AACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCACTCCTAAGGGGCAGACATaGTTTGCCCAGAGCTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: NWHPAGSADLGWHLGYLTPKGQT*FAQSFP Trigger: TGGGAAGCTCTGGGCAAATCATGTCTGCCCCTTAGG...AGTGAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGCACTCCTCCATGGCACACACCAACCTGCAGGCCTATGGCCCAGGGAAACCCAAAGGTCCAACCTaGACCTGGACAGGAGCGGGT | + |
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Preference number: 2 (lower is better) Translates to: CQHSSMAHTNLQAYGPGKPKGPT*TWTGAG Trigger: ACCCGCTCCTGTCCAGGTCCAGGTTGGACCTTTGGG...TTTCCCTGGGCCATAGGCCTGCAGGTTGGTGTGTGCCATGGAGGAGTGCTGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR-3UTR GCA 90 bp | CGGTTCCTAGTGAGATGCTGGTCTGCTCCTGCATGCGGAAACACCTTCTCCACCCCAACCAAGGGGTTCTaGCTAGCTCCCTCCTGGACT | + |
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Preference number: 2 (lower is better) Translates to: RFLVRCWSAPACGNTFSTPTKGF*LAPSWT Trigger: AGTCCAGGAGGGAGCTAGGCAGAACCCCTTGGTTGG...GGTGGAGAAGGTGTTTCCGCATGCAGGAGCAGACCAGCATCTCACTAGGAACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGCTGGCATCTGGGCTACCTCACTAGCCCTAAGGGGCAGACATGATTTGCCCGCATCAGGCCCAGGCTaGTTCAGGTGGAGTGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: LAGIWATSLALRGRHDLPASGPG*FRWSAN Trigger: GTTTGCACTCCACCTGAACCAGCCTGGGCCTGATGC...GGGCAAATCATGTCTGCCCCTTAGGGCTAGTGAGGTAGCCCAGATGCCAGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR-3UTR GCA 90 bp | ACACCAACCTGCAGGCCTATGGCCCAGGGAAACCAAAGGCTTTCACAGGTTGCCCTTCACCACATCCAGTaGCCCTGGAAACGTGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: TPTCRPMAQGNQRLSQVALHHIQ*PWKREP Trigger: AGGCTCACGTTTCCAGGGGCACTGGATGTGGTGAAG...GGCAACCTGTGAAAGCCTTTGGTTTCCCTGGGCCATAGGCCTGCAGGTTGGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR-3UTR CCA 90 bp | AACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCACTTTAAGGAGGGTTCTGTaGCCTAACCTAAAGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: NWHPAGSADLGWHLGYLTLRRVL*PNLKAP Trigger: AGGAGCCTTTAGGTTAGGCCACAGAACCCTCCTTAA...AGTGAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGCATGTCAGCACTCCTCCATGGCACACACCAACCTGCAGGCCTATGGCCCAAAGGCTCCTCAGAAATaGCCAACAACTCAGCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: LACQHSSMAHTNLQAYGPKAPQK*PTTQPA Trigger: GGCTGGCTGAGTTGTTGGCCATTTCTGAGGAGCCTT...TGGGCCATAGGCCTGCAGGTTGGTGTGTGCCATGGAGGAGTGCTGACATGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR-3UTR TCA 90 bp | CGGTTCCTAGTGAGATGCTGGTCTGCTCCTGCATGCGGAAACACCTTCTCCACCGCTCCCTCCTGGACTTaGACACTTCAGACATCATCC | + |
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Preference number: 2 (lower is better) Translates to: RFLVRCWSAPACGNTFSTAPSWT*TLQTSS Trigger: GGATGATGTCTGAAGTGTTCAAGTCCAGGAGGGAGC...GGTGGAGAAGGTGTTTCCGCATGCAGGAGCAGACCAGCATCTCACTAGGAACCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR-3UTR TCA 90 bp | TTGGCTGGCATCTGGGCTACCTCACTAGCCCTAAGGGGCAGACATGATTTGCCCGCCATTGCTAAAGCATaGAGTAGGCTGGGTTTAGGG | + |
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Preference number: 2 (lower is better) Translates to: LAGIWATSLALRGRHDLPAIAKA*SRLGLG Trigger: CCCTAAACCCAGCCTACTTCATGCTTTAGCAATGGC...GGGCAAATCATGTCTGCCCCTTAGGGCTAGTGAGGTAGCCCAGATGCCAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCAATGCTATCTGATACCAGCTCCAACCAAGGGGTTCTGCCTAGCTCCCTCCTCTGGTGCCCTCTTCTaGTGTGTAAGTATACCTGCA | + |
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Preference number: 2 (lower is better) Translates to: GQCYLIPAPTKGFCLAPSSGALF*CVSIPA Trigger: TGCAGGTATACTTACACACCAGAAGAGGGCACCAGA...GGAGGGAGCTAGGCAGAACCCCTTGGTTGGAGCTGGTATCAGATAGCATTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR-3UTR TCA 90 bp | AAAACATCTCCTCCTCTCTGTAAACAAAGCATCAACAAACAGGAAATGGCTCAGAGTCCTGGGTCCTGCTaGGGCCTTACGCCTGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: KTSPPLCKQSINKQEMAQSPGSC*GLTPEG Trigger: GCCCTCAGGCGTAAGGCCTCAGCAGGACCCAGGACT...CTGAGCCATTTCCTGTTTGTTGATGCTTTGTTTACAGAGAGGAGGAGATGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131031.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGCATGTCAGCACTCCTCCATGGCACACACCAACCTGCAGGCCTATGGCCCAATTTATAATGAGATCTaGTGCCCTCTTCTGGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: LACQHSSMAHTNLQAYGPIYNEI*CPLLVC Trigger: ACACACCAGAAGAGGGCACCAGATCTCATTATAAAT...TGGGCCATAGGCCTGCAGGTTGGTGTGTGCCATGGAGGAGTGCTGACATGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR-3UTR CAA 90 bp | GCCAGGAGCCTAGGGCAGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGCCAGGGAGCTGCCCTaGAGTGTCGGTAGCAGGCTA | + |
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Preference number: 3 (lower is better) Translates to: ARSLGQATGTLQAQRTLAARELP*SVGSRL Trigger: TAGCCTGCTACCGACACTCAAGGGCAGCTCCCTGGC...AGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCTGCCCTAGGCTCCTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR CCA 72 bp | GGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTaGCATCTGGGCTACCTCACTAGCCCTAAGGGGCAG | + |
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Preference number: 3 (lower is better) Translates to: GNWHPAGSADLG*HLGYLTSPKGQ Trigger: CTGCCCCTTAGGGCTAGTGAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR TCA 72 bp | GAGGAGGAGTCCTGGGTCCTGCTGAGGCCTTACGCCTaGGGGCCCAGGACCAGGCTTCTTGAAGCAAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: EEESWVLLRPYA*GPRTRLLEARS Trigger: GCTCCTTGCTTCAAGAAGCCTGGTCCTGGGCCCTCAGGCGTAAGGCCTCAGCAGGACCCAGGACTCCTCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131031.2 |
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| 3UTR CCA 72 bp | GTATGGCAGCATAGCCAGGAGCCTAGGGCAGGCAACTaGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCAT | + |
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Preference number: 3 (lower is better) Translates to: VWQHSQEPRAGN*HPAGSADLGWH Trigger: ATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCTGCCCTAGGCTCCTGGCTATGCTGCCATAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR-3UTR CAA 90 bp | GGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCAGGGGCAGACATGATTaGCCCAGAGCTTCCCAGAGC | + |
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Preference number: 3 (lower is better) Translates to: GNWHPAGSADLGWHLGYLRGRHD*PRASQS Trigger: GCTCTGGGAAGCTCTGGGCAAATCATGTCTGCCCCT...GAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR CCA 72 bp | CGACTGGGAGCACTGTGTGTAGCATCAGGCCCAGGCTaGTTCAGGTGGAGTGCAAACAGGAGGGGCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: RLGALCVASGPG*FRWSANRRGCL Trigger: GAGGCAGCCCCTCCTGTTTGCACTCCACCTGAACCAGCCTGGGCCTGATGCTACACACAGTGCTCCCAGTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR-3UTR CAA 90 bp | AGGCCCAGCCAGGGCTCCAAGTCCCAAAGGTCCAACCTGGACCTGGACAGGAGCTGGCTAACTTCGGGGTaGGAGAGATGGTTCAGAGGC | + |
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Preference number: 3 (lower is better) Translates to: RPSQGSKSQRSNLDLDRSWLTSG*ERWFRG Trigger: GCCTCTGAACCATCTCTCCAACCCCGAAGTTAGCCA...GCTCCTGTCCAGGTCCAGGTTGGACCTTTGGGACTTGGAGCCCTGGCTGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR-3UTR CAA 90 bp | TTGGCTGGCATCTGGGCTACCTCACTAGCCCTAAGGGGCAGACATGATTTGCCCGCCAGGGAGCTGCCCTaGAGTGTCGGTAGCAGGCTA | + |
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Preference number: 3 (lower is better) Translates to: LAGIWATSLALRGRHDLPARELP*SVGSRL Trigger: TAGCCTGCTACCGACACTCAAGGGCAGCTCCCTGGC...GGGCAAATCATGTCTGCCCCTTAGGGCTAGTGAGGTAGCCCAGATGCCAGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| 3UTR GCA 72 bp | AGCCGGTTCCTAGTGAGATGCTGGTCTGCTCCTGCATaGGGAAACACCTTCTCCACCTGCCTCCTCACTGGC | + |
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Preference number: 3 (lower is better) Translates to: SRFLVRCWSAPA*GNTFSTCLLTG Trigger: GCCAGTGAGGAGGCAGGTGGAGAAGGTGTTTCCGCATGCAGGAGCAGACCAGCATCTCACTAGGAACCGGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| 3UTR TCA 72 bp | GAGGCCTTACGCCTGAGGGCCCAGGACCAGGCTTCTTaGAGCAAGGAGCCTAAGGCAGGAAGGCAGTTTACA | + |
|
Preference number: 3 (lower is better) Translates to: EALRLRAQDQAS*SKEPKAGRQFT Trigger: TGTAAACTGCCTTCCTGCCTTAGGCTCCTTGCTTCAAGAAGCCTGGTCCTGGGCCCTCAGGCGTAAGGCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131031.2 |
||
| 3UTR GCA 72 bp | GTCTCCTCAGATGCTCCCAGCCGGTTCCTAGTGAGATaGTGGTCTGCTCCTGCATGCGGAAACACCTTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VSSDAPSRFLVR*WSAPACGNTFS Trigger: GGAGAAGGTGTTTCCGCATGCAGGAGCAGACCAGCATCTCACTAGGAACCGGCTGGGAGCATCTGAGGAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| 3UTR CCA 72 bp | GCCAGGGCTCCAAGTCCCAAAGGTCCAACCTGGACCTaGACAGGAGCGGGTAGGGGCACATGGATAGATAAA | + |
|
Preference number: 3 (lower is better) Translates to: ARAPSPKGPTWT*TGAGRGTWIDK Trigger: TTTATCTATCCATGTGCCCCTACCCGCTCCTGTCCAGGTCCAGGTTGGACCTTTGGGACTTGGAGCCCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| 3UTR GCA 72 bp | TGGCATGTCAGCACTCCTCCATGGCACACACCAACCTaGAGGCCTATGGCCCAGGGAAACCAAAGGCTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: WHVSTPPWHTPT*RPMAQGNQRLS Trigger: TGAAAGCCTTTGGTTTCCCTGGGCCATAGGCCTGCAGGTTGGTGTGTGCCATGGAGGAGTGCTGACATGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| 3UTR CCA 72 bp | TCTTCTTGGCAAGCAATAGACAACCCAGACTCGCAGTaGCCTGGCACGTGGTTCACAAAGCCAGGGAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: SSWQAIDNPDSQ*PGTWFTKPGSC Trigger: GCAGCTCCCTGGCTTTGTGAACCACGTGCCAGGCCACTGCGAGTCTGGGTTGTCTATTGCTTGCCAAGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| 3UTR GCA 72 bp | GCCTATGGCCCAGGGAAACCAAAGGCTTTCACAGGTTaGCTAGGTGGTAACCCAGCCTGGTTATCATCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: AYGPGKPKAFTG*LGGNPAWLSSL Trigger: GAGGGATGATAACCAGGCTGGGTTACCACCTAGGCAACCTGTGAAAGCCTTTGGTTTCCCTGGGCCATAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| 3UTR GCA 72 bp | AAGCTGGAGGCAAGTTCAAGCTTTACATGGCAGGACTaGGCCCTCACTTCACGTGTCTCCTCAGATGCTCCC | + |
|
Preference number: 3 (lower is better) Translates to: KLEASSSFTWQD*ALTSRVSSDAP Trigger: GGGAGCATCTGAGGAGACACGTGAAGTGAGGGCGCAGTCCTGCCATGTAAAGCTTGAACTTGCCTCCAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| 3UTR CCA 72 bp | AGTTTCAATGACAGGGCTGTGCCATCTAGGAACCCTTaGCATGTCAGCACTCCTCCATGGCACACACCAACC | + |
|
Preference number: 3 (lower is better) Translates to: SFNDRAVPSRNP*HVSTPPWHTPT Trigger: GGTTGGTGTGTGCCATGGAGGAGTGCTGACATGCCAAGGGTTCCTAGATGGCACAGCCCTGTCATTGAAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| 3UTR CCA 72 bp | CTCCTCTCTGTAAACAAAGCATCAACAAACAGGAAATaGCTCAGAGGAGGAGTCCTGGGTCCTGCTGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLSVNKASTNRK*LRGGVLGPAEA Trigger: GGCCTCAGCAGGACCCAGGACTCCTCCTCTGAGCCATTTCCTGTTTGTTGATGCTTTGTTTACAGAGAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131031.2 |
||
| 3UTR CCA 72 bp | GATTTTGGCAAGCTGGAGGCAAGTTCAAGCTTTACATaGCAGGACTGCGCCCTCACTTCACGTGTCTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: DFGKLEASSSFT*QDCALTSRVSS Trigger: TGAGGAGACACGTGAAGTGAGGGCGCAGTCCTGCCATGTAAAGCTTGAACTTGCCTCCAGCTTGCCAAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| 3UTR GCA 72 bp | AGACTTGACTGTCCTGGGTTCAGTCTGCAGGAAGTCTaGACTGAGAGATTTTGGCAAGCTGGAGGCAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: RLDCPGFSLQEV*TERFWQAGGKF Trigger: GAACTTGCCTCCAGCTTGCCAAAATCTCTCAGTGCAGACTTCCTGCAGACTGAACCCAGGACAGTCAAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| 3UTR CCA 72 bp | GGGTTCAGTCTGCAGGAAGTCTGCACTGAGAGATTTTaGCAAGCTGGAGGCAAGTTCAAGCTTTACATGGCA | + |
|
Preference number: 3 (lower is better) Translates to: GFSLQEVCTERF*QAGGKFKLYMA Trigger: TGCCATGTAAAGCTTGAACTTGCCTCCAGCTTGCCAAAATCTCTCAGTGCAGACTTCCTGCAGACTGAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| 3UTR TCA 72 bp | CATCAGGTCTTGACGATCACCAATAGGGATGTGACATaGAAGTTAAGGAGCTGTAACCATGCGAAGTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: HQVLTITNRDVT*KLRSCNHAKSL Trigger: CAATGACTTCGCATGGTTACAGCTCCTTAACTTTCATGTCACATCCCTATTGGTGATCGTCAAGACCTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| 3UTR CCA 72 bp | CCACATGGTGGTTATGAAATCATTTATAATGAGATCTaGTGCCCTCTTCTGGTGTGTAAGTATACCTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PHGGYEIIYNEI*CPLLVCKYTCR Trigger: TCTGCAGGTATACTTACACACCAGAAGAGGGCACCAGATCTCATTATAAATGATTTCATAACCACCATGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| 3UTR GCA 72 bp | CATGGTGGTTATGAAATCATTTATAATGAGATCTGGTaGCCTCTTCTGGTGTGTAAGTATACCTGCAGATGT | + |
|
Preference number: 3 (lower is better) Translates to: HGGYEIIYNEIW*PLLVCKYTCRC Trigger: ACATCTGCAGGTATACTTACACACCAGAAGAGGGCACCAGATCTCATTATAAATGATTTCATAACCACCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| 3UTR CCA 72 bp | ATGAAATCATTTATAATGAGATCTGGTGCCCTCTTCTaGTGTGTAAGTATACCTGCAGATGTAATACTATAT | + |
|
Preference number: 3 (lower is better) Translates to: MKSFIMRSGALF*CVSIPADVILY Trigger: ATATAGTATTACATCTGCAGGTATACTTACACACCAGAAGAGGGCACCAGATCTCATTATAAATGATTTCAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR CCA 90 bp | AACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCACTGGACTCCTCAGCTCCTaGGCCTGGGCCAGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NWHPAGSADLGWHLGYLTGLLSS*AWARGW Trigger: CCAGCCCCTGGCCCAGGCCCAGGAGCTGAGGAGTCC...AGTGAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR CCA 90 bp | CATCAGGCCCAGGCTGGTTCAGGTGGAGTGCAAACAGGAGGGGCTGCCTCTGAGGGACTCCTCAGCTCCTaGGCCTGGGCCAGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HQAQAGSGGVQTGGAASEGLLSS*AWARGW Trigger: CCAGCCCCTGGCCCAGGCCCAGGAGCTGAGGAGTCC...CTCAGAGGCAGCCCCTCCTGTTTGCACTCCACCTGAACCAGCCTGGGCCTGATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGGAGCCTAGGGCAGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTTGCGGGCCGCCATGGTaGCGCTGTAGAAGACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARSLGQATGTLQAQRTLACGPPW*RCRRLP Trigger: TGGAAGTCTTCTACAGCGTCACCATGGCGGCCCGCA...AGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCTGCCCTAGGCTCCTGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR CCA 90 bp | GGGGCTGCCTCTGAGTCAGGAATCCCGCCGCTGAACTGGGATGAAGCTAGGAAGCTCAGCTCCTGGGCCTaGGCCAGGGGCTGGTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GAASESGIPPLNWDEARKLSSWA*ARGWWR Trigger: TCGCCACCAGCCCCTGGCCCAGGCCCAGGAGCTGAG...CTTCCTAGCTTCATCCCAGTTCAGCGGCGGGATTCCTGACTCAGAGGCAGCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACATCGCAGGTAGTCGGTaGGCAGGAAGACCGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: AGNWHPAGSADLGWHLGYIAGSR*AGRPGP Trigger: TGGTCCCGGTCTTCCTGCTCACCGACTACCTGCGAT...GTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR TCA 90 bp | GGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCTGCGGGCCGCCATGGTaGCGCTGTAGAAGACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GNWHPAGSADLGWHLGYLCGPPW*RCRRLP Trigger: TGGAAGTCTTCTACAGCGTCACCATGGCGGCCCGCA...GAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR CCA 90 bp | TGGCACGTGGTTCACAAAGCCAGGGAGCTGCCCTTGAGTGTCGGTAGCAGGCTACTCAGCTCCTGGGCCTaGGCCAGGGGCTGGTGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: WHVVHKARELPLSVGSRLLSSWA*ARGWWR Trigger: TCGCCACCAGCCCCTGGCCCAGGCCCAGGAGCTGAG...TAGCCTGCTACCGACACTCAAGGGCAGCTCCCTGGCTTTGTGAACCACGTGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR TCA 90 bp | GCAGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCGATCACACCTGCGATaGCCAGCTTGGACCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGNWHPAGSADLGWHLGYRSHLR*PAWTTE Trigger: CTCTGTGGTCCAAGCTGGTCATCGCAGGTGTGATCG...GTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCCAGCCAGGGCTCCAAGTCCCAAAGGTCCAACCTGGACCTGGACAGGAGCCTCACCATGACCACATaGTGGGCTTCCCTCCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RPSQGSKSQRSNLDLDRSLTMTT*WASLPQ Trigger: TTGGGGGAGGGAAGCCCATCATGTGGTCATGGTGAG...GCTCCTGTCCAGGTCCAGGTTGGACCTTTGGGACTTGGAGCCCTGGCTGGGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR GCA 90 bp | GGGGCTGCCTCTGAGTCAGGAATCCCGCCGCTGAACTGGGATGAAGCTAGGAAGGTGAGTAGCTGGCCATaGGCTGGTAGCGGGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GAASESGIPPLNWDEARKVSSWP*AGSGRG Trigger: ACCCCTCCCGCTACCAGCGCATGGCCAGCTACTCAC...CTTCCTAGCTTCATCCCAGTTCAGCGGCGGGATTCCTGACTCAGAGGCAGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGACTCGCAGTGGCCTGGCACGTGGTTCACAAAGCCAGGGAGCTGCCCTTGCCCTGTCGTCCTCCATaGCATCCTCTGAGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRLAVAWHVVHKARELPLPCRPP*HPLRAA Trigger: AGCTGCTCTCAGAGGATGGCATGGAGGACGACAGGG...CAAGGGCAGCTCCCTGGCTTTGTGAACCACGTGCCAGGCCACTGCGAGTCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGGCAGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGTGCGATCTAGTTTCCTaGTTTCTGGCCGGTCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGQATGTLQAQRTLAGIWCDLVS*FLAGQA Trigger: GGCCTGACCGGCCAGAAACCAGGAAACTAGATCGCA...CCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCTGCCCTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR TCA 90 bp | AGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTAGTAGCCTGAAGAGTTaGAGACCCACCAGAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RQLAPCRLSGPWLASGLPSSLKS*RPTRGT Trigger: GGTGCCTCTGGTGGGTCTTCAACTCTTCAGGCTACT...AGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCACTACGATCACACCTGCGATaGCCAGCTTGGACCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGTLQAQRTLAGIWATSLRSHLR*PAWTTE Trigger: CTCTGTGGTCCAAGCTGGTCATCGCAGGTGTGATCG...TAGTGAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR GCA 90 bp | CATCAGGCCCAGGCTGGTTCAGGTGGAGTGCAAACAGGAGGGGCTGCCTCTGAGGTATGCCTGCTTTTCTaGCACCTGGCCAGTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HQAQAGSGGVQTGGAASEVCLLF*HLASGH Trigger: GTGCCCACTGGCCAGGTGGCAGAAAAGCAGGCATAC...CTCAGAGGCAGCCCCTCCTGTTTGCACTCCACCTGAACCAGCCTGGGCCTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR GCA 90 bp | CCCAGACTCGCAGTGGCCTGGCACGTGGTTCACAAAGCCAGGGAGCTGCCCTTGCCAGTTCACTTAGCATaGGCACCAGGAAGGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRLAVAWHVVHKARELPLPVHLA*APGRSP Trigger: GGGACTCCTTCCTGGTGCGCATGCTAAGTGAACTGG...CAAGGGCAGCTCCCTGGCTTTGTGAACCACGTGCCAGGCCACTGCGAGTCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR GCA 90 bp | AACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCACTCCCTGTCGTCCTCCATaGCATCCTCTGAGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NWHPAGSADLGWHLGYLTPCRPP*HPLRAA Trigger: AGCTGCTCTCAGAGGATGGCATGGAGGACGACAGGG...AGTGAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR CCA 90 bp | CATCAGGCCCAGGCTGGTTCAGGTGGAGTGCAAACAGGAGGGGCTGCCTCTGAGGTTCGTGGTCCTGCCTaGGCTCTTCGTATGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HQAQAGSGGVQTGGAASEVRGPA*ALRMPA Trigger: AGCAGGCATACGAAGAGCCCAGGCAGGACCACGAAC...CTCAGAGGCAGCCCCTCCTGTTTGCACTCCACCTGAACCAGCCTGGGCCTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGGGCTCCAAGTCCCAAAGGTCCAACCTGGACCTGGACAGGAGCGGGTAGGTGCGATCTAGTTTCCTaGTTTCTGGCCGGTCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: ARAPSPKGPTWTWTGAGRCDLVS*FLAGQA Trigger: GGCCTGACCGGCCAGAAACCAGGAAACTAGATCGCA...CCTACCCGCTCCTGTCCAGGTCCAGGTTGGACCTTTGGGACTTGGAGCCCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR CCA 90 bp | CTAGGGCAGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGTACAGAAAACCAGGCTaGCCTGGATGGCGATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: LGQATGTLQAQRTLAGIWYRKPG*PGWRSH Trigger: GTGTGATCGCCATCCAGGCCAGCCTGGTTTTCTGTA...CCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCTGCCCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR TCA 90 bp | TGGCACGTGGTTCACAAAGCCAGGGAGCTGCCCTTGAGTGTCGGTAGCAGGCTAATCGCAGGTAGTCGGTaGGCAGGAAGACCGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: WHVVHKARELPLSVGSRLIAGSR*AGRPGP Trigger: TGGTCCCGGTCTTCCTGCTCACCGACTACCTGCGAT...TAGCCTGCTACCGACACTCAAGGGCAGCTCCCTGGCTTTGTGAACCACGTGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR TCA 90 bp | ACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCACTAAGTAGCCTGAAGAGTTaGAGACCCACCAGAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: TGTLQAQRTLAGIWATSLSSLKS*RPTRGT Trigger: GGTGCCTCTGGTGGGTCTTCAACTCTTCAGGCTACT...TAGTGAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR TCA 90 bp | GCCAGGAGCCTAGGGCAGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTCATGCACATAGTAGGTaGTCAGGTAGTAGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: ARSLGQATGTLQAQRTLAHAHSR*SGSSLK Trigger: CTTCAGGCTACTACCTGATCACCTACTATGTGCATG...AGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCTGCCCTAGGCTCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR TCA 90 bp | CTTGGCATGTCAGCACTCCTCCATGGCACACACCAACCTGCAGGCCTATGGCCCCGATCACACCTGCGATaGCCAGCTTGGACCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGMSALLHGTHQPAGLWPRSHLR*PAWTTE Trigger: CTCTGTGGTCCAAGCTGGTCATCGCAGGTGTGATCG...GGGCCATAGGCCTGCAGGTTGGTGTGTGCCATGGAGGAGTGCTGACATGCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR TCA 90 bp | TGGCTCAGAGGAGGAGTCCTGGGTCCTGCTGAGGCCTTACGCCTGAGGGCCCAGAGGGAAGACGCAATCTaGAAAGTGGCAATGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: WLRGGVLGPAEALRLRAQREDAI*KVAMGT Trigger: TGTGCCCATTGCCACTTTTCAGATTGCGTCTTCCCT...CTGGGCCCTCAGGCGTAAGGCCTCAGCAGGACCCAGGACTCCTCCTCTGAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131031.2 |
||
| CDS-3UTR TCA 90 bp | CTAGGGCAGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGAGGGAAGACGCAATCTaGAAAGTGGCAATGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LGQATGTLQAQRTLAGIWREDAI*KVAMGT Trigger: TGTGCCCATTGCCACTTTTCAGATTGCGTCTTCCCT...CCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCTGCCCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR GCA 90 bp | CGACTGGGAGCACTGTGTGTAGCATCAGGCCCAGGCTGGTTCAGGTGGAGTGCATGTGCACGACAGATGTaGCCAGCAGCAGCAACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLGALCVASGPGWFRWSACARQM*PAAATA Trigger: GGCTGTTGCTGCTGCTGGGCACATCTGTCGTGCACA...TGCACTCCACCTGAACCAGCCTGGGCCTGATGCTACACACAGTGCTCCCAGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR GCA 90 bp | TTGGCTGGCATCTGGGCTACCTCACTAGCCCTAAGGGGCAGACATGATTTGCCCGTGAGTAGCTGGCCATaGGCTGGTAGCGGGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAGIWATSLALRGRHDLPVSSWP*AGSGRG Trigger: ACCCCTCCCGCTACCAGCGCATGGCCAGCTACTCAC...GGGCAAATCATGTCTGCCCCTTAGGGCTAGTGAGGTAGCCCAGATGCCAGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGCATAGCCAGGAGCCTAGGGCAGGCAACTGGCACCCTGCAGGCTCAGCGGTGCAAGTGCCCAGCATaGGATCTAGTTTCCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSIARSLGQATGTLQAQRCKCPA*DLVSWF Trigger: AAACCAGGAAACTAGATCGCATGCTGGGCACTTGCA...CCGCTGAGCCTGCAGGGTGCCAGTTGCCTGCCCTAGGCTCCTGGCTATGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGGCACGTGGTTCACAAAGCCAGGGAGCTGCCCTTGAGTGTCGGTAGCAGGCAGGATTTCAGTTCGTaGTCCTGCCTGGGCTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: AWHVVHKARELPLSVGSRQDFSS*SCLGSS Trigger: CGAAGAGCCCAGGCAGGACCACGAACTGAAATCCTG...CCTGCTACCGACACTCAAGGGCAGCTCCCTGGCTTTGTGAACCACGTGCCAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGACTCGCAGTGGCCTGGCACGTGGTTCACAAAGCCAGGGAGCTGCCCTTGTACAGAAAACCAGGCTaGCCTGGATGGCGATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PRLAVAWHVVHKARELPLYRKPG*PGWRSH Trigger: GTGTGATCGCCATCCAGGCCAGCCTGGTTTTCTGTA...CAAGGGCAGCTCCCTGGCTTTGTGAACCACGTGCCAGGCCACTGCGAGTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR TCA 90 bp | ACACCAACCTGCAGGCCTATGGCCCAGGGAAACCAAAGGCTTTCACAGGTTGCCATCGCAGGTAGTCGGTaGGCAGGAAGACCGGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: TPTCRPMAQGNQRLSQVAIAGSR*AGRPGP Trigger: TGGTCCCGGTCTTCCTGCTCACCGACTACCTGCGAT...GGCAACCTGTGAAAGCCTTTGGTTTCCCTGGGCCATAGGCCTGCAGGTTGGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR TCA 90 bp | GGCCAATGCTATCTGATACCAGCTCCAACCAAGGGGTTCTGCCTAGCTCCCTCCAGGAGGCCCTCACCATaGCCACATGATGGGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GQCYLIPAPTKGFCLAPSRRPSP*PHDGLP Trigger: GGGAAGCCCATCATGTGGTCATGGTGAGGGCCTCCT...GGAGGGAGCTAGGCAGAACCCCTTGGTTGGAGCTGGTATCAGATAGCATTGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTTTACATGGCAGGACTGCGCCCTCACTTCACGTGTCTCCTCAGATGCTCCGTGAGTAGCTGGCCATaGGCTGGTAGCGGGAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLYMAGLRPHFTCLLRCSVSSWP*AGSGRG Trigger: ACCCCTCCCGCTACCAGCGCATGGCCAGCTACTCAC...GGAGCATCTGAGGAGACACGTGAAGTGAGGGCGCAGTCCTGCCATGTAAAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR GCA 90 bp | GGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCTGCAAGTGCCCAGCATaGGATCTAGTTTCCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: GNWHPAGSADLGWHLGYLCKCPA*DLVSWF Trigger: AAACCAGGAAACTAGATCGCATGCTGGGCACTTGCA...GAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGGCACGTGGTTCACAAAGCCAGGGAGCTGCCCTTGAGTGTCGGTAGCAGGAGGAGTCCCTGCAAGTaGCCAGCATGCGATCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AWHVVHKARELPLSVGSRRSPCK*PACDLV Trigger: AACTAGATCGCATGCTGGGCACTTGCAGGGACTCCT...CCTGCTACCGACACTCAAGGGCAGCTCCCTGGCTTTGTGAACCACGTGCCAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR GCA 90 bp | AACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCACTAGGAGTCCCTGCAAGTaGCCAGCATGCGATCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: NWHPAGSADLGWHLGYLTRSPCK*PACDLV Trigger: AACTAGATCGCATGCTGGGCACTTGCAGGGACTCCT...AGTGAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR CCA 90 bp | TGGCACGTGGTTCACAAAGCCAGGGAGCTGCCCTTGAGTGTCGGTAGCAGGCTAGTTCGTGGTCCTGCCTaGGCTCTTCGTATGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WHVVHKARELPLSVGSRLVRGPA*ALRMPA Trigger: AGCAGGCATACGAAGAGCCCAGGCAGGACCACGAAC...TAGCCTGCTACCGACACTCAAGGGCAGCTCCCTGGCTTTGTGAACCACGTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR CCA 90 bp | CGACTGGGAGCACTGTGTGTAGCATCAGGCCCAGGCTGGTTCAGGTGGAGTGCATGCGATCTAGTTTCCTaGTTTCTGGCCGGTCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLGALCVASGPGWFRWSACDLVS*FLAGQA Trigger: GGCCTGACCGGCCAGAAACCAGGAAACTAGATCGCA...TGCACTCCACCTGAACCAGCCTGGGCCTGATGCTACACACAGTGCTCCCAGTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR CCA 90 bp | GGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCTCTGAAAAGTGGCAATaGGCACAAGGAACTGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GNWHPAGSADLGWHLGYLSEKWQ*AQGTGR Trigger: CCTACCAGTTCCTTGTGCCCATTGCCACTTTTCAGA...GAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR CCA 90 bp | AGCCAGGAGCCTAGGGCAGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCACGCAATCTGAAAAGTaGCAATGGGCACAAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SQEPRAGNWHPAGSADLGTQSEK*QWAQGT Trigger: AGTTCCTTGTGCCCATTGCCACTTTTCAGATTGCGT...GCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCTGCCCTAGGCTCCTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR TCA 90 bp | CATGAGGATCTGTGGGTGACTGTCAGAATGATGGAGCGCATCTCTCCAGGCCCCCGATCACACCTGCGATaGCCAGCTTGGACCACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HEDLWVTVRMMERISPGPRSHLR*PAWTTE Trigger: CTCTGTGGTCCAAGCTGGTCATCGCAGGTGTGATCG...GGGGCCTGGAGAGATGCGCTCCATCATTCTGACAGTCACCCACAGATCCTCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131031.2 |
||
| CDS-3UTR TCA 90 bp | CATCAGGCCCAGGCTGGTTCAGGTGGAGTGCAAACAGGAGGGGCTGCCTCTGAGAGGGAAGACGCAATCTaGAAAGTGGCAATGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HQAQAGSGGVQTGGAASEREDAI*KVAMGT Trigger: TGTGCCCATTGCCACTTTTCAGATTGCGTCTTCCCT...CTCAGAGGCAGCCCCTCCTGTTTGCACTCCACCTGAACCAGCCTGGGCCTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR GCA 90 bp | TTGGCTGGCATCTGGGCTACCTCACTAGCCCTAAGGGGCAGACATGATTTGCCCGTATGCCTGCTTTTCTaGCACCTGGCCAGTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LAGIWATSLALRGRHDLPVCLLF*HLASGH Trigger: GTGCCCACTGGCCAGGTGGCAGAAAAGCAGGCATAC...GGGCAAATCATGTCTGCCCCTTAGGGCTAGTGAGGTAGCCCAGATGCCAGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR GCA 90 bp | CGGTTCCTAGTGAGATGCTGGTCTGCTCCTGCATGCGGAAACACCTTCTCCACCGTATGCCTGCTTTTCTaGCACCTGGCCAGTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RFLVRCWSAPACGNTFSTVCLLF*HLASGH Trigger: GTGCCCACTGGCCAGGTGGCAGAAAAGCAGGCATAC...GGTGGAGAAGGTGTTTCCGCATGCAGGAGCAGACCAGCATCTCACTAGGAACCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR GCA 90 bp | CGGTTCCTAGTGAGATGCTGGTCTGCTCCTGCATGCGGAAACACCTTCTCCACCTGTGCACGACAGATGTaGCCAGCAGCAGCAACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RFLVRCWSAPACGNTFSTCARQM*PAAATA Trigger: GGCTGTTGCTGCTGCTGGGCACATCTGTCGTGCACA...GGTGGAGAAGGTGTTTCCGCATGCAGGAGCAGACCAGCATCTCACTAGGAACCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR GCA 90 bp | TGGCACGTGGTTCACAAAGCCAGGGAGCTGCCCTTGAGTGTCGGTAGCAGGCTACCAGTTCACTTAGCATaGGCACCAGGAAGGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WHVVHKARELPLSVGSRLPVHLA*APGRSP Trigger: GGGACTCCTTCCTGGTGCGCATGCTAAGTGAACTGG...TAGCCTGCTACCGACACTCAAGGGCAGCTCCCTGGCTTTGTGAACCACGTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTCCTGGGTCCTGCTGAGGCCTTACGCCTGAGGGCCCAGGACCAGGCTTCTGATCCCAAAGACCAATaGACAGAGCTCTTTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: GVLGPAEALRLRAQDQASDPKDQ*TELFRQ Trigger: CTGTCTAAAGAGCTCTGTGCATTGGTCTTTGGGATC...AGAAGCCTGGTCCTGGGCCCTCAGGCGTAAGGCCTCAGCAGGACCCAGGACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131031.2 |
||
| CDS-3UTR CCA 90 bp | ACACCAACCTGCAGGCCTATGGCCCAGGGAAACCAAAGGCTTTCACAGGTTGCCGTTCGTGGTCCTGCCTaGGCTCTTCGTATGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPTCRPMAQGNQRLSQVAVRGPA*ALRMPA Trigger: AGCAGGCATACGAAGAGCCCAGGCAGGACCACGAAC...GGCAACCTGTGAAAGCCTTTGGTTTCCCTGGGCCATAGGCCTGCAGGTTGGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR CCA 90 bp | TTGGCATGTCAGCACTCCTCCATGGCACACACCAACCTGCAGGCCTATGGCCCACAGGATTTCAGTTCGTaGTCCTGCCTGGGCTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LACQHSSMAHTNLQAYGPQDFSS*SCLGSS Trigger: CGAAGAGCCCAGGCAGGACCACGAACTGAAATCCTG...TGGGCCATAGGCCTGCAGGTTGGTGTGTGCCATGGAGGAGTGCTGACATGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCCAGCCAGGGCTCCAAGTCCCAAAGGTCCAACCTGGACCTGGACAGGAGCCAGATGTCCCGGATCTaGAACATACAGAAAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RPSQGSKSQRSNLDLDRSQMSRI*NIQKTR Trigger: CCTGGTTTTCTGTATGTTCCAGATCCGGGACATCTG...GCTCCTGTCCAGGTCCAGGTTGGACCTTTGGGACTTGGAGCCCTGGCTGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| 3UTR CAA 72 bp | GCCTGGCACGTGGTTCACAAAGCCAGGGAGCTGCCCTaGAGTGTCGGTAGCAGGCTACAGCCATTGCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AWHVVHKARELP*SVGSRLQPLLK Trigger: CTTTAGCAATGGCTGTAGCCTGCTACCGACACTCAAGGGCAGCTCCCTGGCTTTGTGAACCACGTGCCAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR TCA 90 bp | GCCTGGCACGTGGTTCACAAAGCCAGGGAGCTGCCCTTGAGTGTCGGTAGCAGGTGTAGAAGACTTCCATaGGTTGCATGTGCACGACAG | + |
|
Preference number: 4 (lower is better) Translates to: AWHVVHKARELPLSVGSRCRRLP*VACARQ Trigger: CTGTCGTGCACATGCAACTCATGGAAGTCTTCTACA...CCTGCTACCGACACTCAAGGGCAGCTCCCTGGCTTTGTGAACCACGTGCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR CCA 90 bp | TGTCAGCACTCCTCCATGGCACACACCAACCTGCAGGCCTATGGCCCAGGGAAATACAGAAAACCAGGCTaGCCTGGATGGCGATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: CQHSSMAHTNLQAYGPGKYRKPG*PGWRSH Trigger: GTGTGATCGCCATCCAGGCCAGCCTGGTTTTCTGTA...TTTCCCTGGGCCATAGGCCTGCAGGTTGGTGTGTGCCATGGAGGAGTGCTGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGGCACGTGGTTCACAAAGCCAGGGAGCTGCCCTTGAGTGTCGGTAGCAGGCAGATGTCCCGGATCTaGAACATACAGAAAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AWHVVHKARELPLSVGSRQMSRI*NIQKTR Trigger: CCTGGTTTTCTGTATGTTCCAGATCCGGGACATCTG...CCTGCTACCGACACTCAAGGGCAGCTCCCTGGCTTTGTGAACCACGTGCCAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR CCA 90 bp | AACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCACTCAGATGTCCCGGATCTaGAACATACAGAAAACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NWHPAGSADLGWHLGYLTQMSRI*NIQKTR Trigger: CCTGGTTTTCTGTATGTTCCAGATCCGGGACATCTG...AGTGAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTACGCAATCTGAAAAGTaGCAATGGGCACAAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: RQLAPCRLSGPWLASGLPTQSEK*QWAQGT Trigger: AGTTCCTTGTGCCCATTGCCACTTTTCAGATTGCGT...AGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR CCA 90 bp | CTTGGCATGTCAGCACTCCTCCATGGCACACACCAACCTGCAGGCCTATGGCCCTTCCTGCTCCAAATGTaGGCCACACTCTGCATACTC | + |
|
Preference number: 4 (lower is better) Translates to: LGMSALLHGTHQPAGLWPFLLQM*ATLCIL Trigger: GAGTATGCAGAGTGTGGCCCACATTTGGAGCAGGAA...GGGCCATAGGCCTGCAGGTTGGTGTGTGCCATGGAGGAGTGCTGACATGCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR TCA 90 bp | CGACTGGGAGCACTGTGTGTAGCATCAGGCCCAGGCTGGTTCAGGTGGAGTGCACATGCACATAGTAGGTaGTCAGGTAGTAGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLGALCVASGPGWFRWSAHAHSR*SGSSLK Trigger: CTTCAGGCTACTACCTGATCACCTACTATGTGCATG...TGCACTCCACCTGAACCAGCCTGGGCCTGATGCTACACACAGTGCTCCCAGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR GCA 90 bp | AACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCACTGATCCCAAAGACCAATaGACAGAGCTCTTTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: NWHPAGSADLGWHLGYLTDPKDQ*TELFRQ Trigger: CTGTCTAAAGAGCTCTGTGCATTGGTCTTTGGGATC...AGTGAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR TCA 90 bp | TTGGCTGGCATCTGGGCTACCTCACTAGCCCTAAGGGGCAGACATGATTTGCCCGATCAGGTAGTAGCCTaGAGAGTTGAAGACCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LAGIWATSLALRGRHDLPDQVVA*RVEDPP Trigger: TGGTGGGTCTTCAACTCTTCAGGCTACTACCTGATC...GGGCAAATCATGTCTGCCCCTTAGGGCTAGTGAGGTAGCCCAGATGCCAGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR TCA 90 bp | TGTCAGCACTCCTCCATGGCACACACCAACCTGCAGGCCTATGGCCCAGGGAAACATGCACATAGTAGGTaGTCAGGTAGTAGCCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: CQHSSMAHTNLQAYGPGKHAHSR*SGSSLK Trigger: CTTCAGGCTACTACCTGATCACCTACTATGTGCATG...TTTCCCTGGGCCATAGGCCTGCAGGTTGGTGTGTGCCATGGAGGAGTGCTGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTCACTGGCCCACCAGACTTAACACCAAGTTTCAATGACAGGGCTGTGCCACCAGTTCACTTAGCATaGGCACCAGGAAGGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLTGPPDLTPSFNDRAVPPVHLA*APGRSP Trigger: GGGACTCCTTCCTGGTGCGCATGCTAAGTGAACTGG...TGGCACAGCCCTGTCATTGAAACTTGGTGTTAAGTCTGGTGGGCCAGTGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR GCA 90 bp | ACACCAACCTGCAGGCCTATGGCCCAGGGAAACCAAAGGCTTTCACAGGTTGCCTGCAAGTGCCCAGCATaGGATCTAGTTTCCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TPTCRPMAQGNQRLSQVACKCPA*DLVSWF Trigger: AAACCAGGAAACTAGATCGCATGCTGGGCACTTGCA...GGCAACCTGTGAAAGCCTTTGGTTTCCCTGGGCCATAGGCCTGCAGGTTGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR GCA 90 bp | AGCCCCTACTCTTTGAGGACAGACAGACTTGACTGTCCTGGGTTCAGTCTGCAGAGGAGTCCCTGCAAGTaGCCAGCATGCGATCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SPYSLRTDRLDCPGFSLQRSPCK*PACDLV Trigger: AACTAGATCGCATGCTGGGCACTTGCAGGGACTCCT...CTGCAGACTGAACCCAGGACAGTCAAGTCTGTCTGTCCTCAAAGAGTAGGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR GCA 90 bp | TGGCACGTGGTTCACAAAGCCAGGGAGCTGCCCTTGAGTGTCGGTAGCAGGCTAGATCCCAAAGACCAATaGACAGAGCTCTTTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: WHVVHKARELPLSVGSRLDPKDQ*TELFRQ Trigger: CTGTCTAAAGAGCTCTGTGCATTGGTCTTTGGGATC...TAGCCTGCTACCGACACTCAAGGGCAGCTCCCTGGCTTTGTGAACCACGTGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGGCTTCTTGAAGCAAGGAGCCTAAGGCAGGAAGGCAGTTTACACAGCAGGTACAGAAAACCAGGCTaGCCTGGATGGCGATCACAC | + |
|
Preference number: 4 (lower is better) Translates to: TRLLEARSLRQEGSLHSRYRKPG*PGWRSH Trigger: GTGTGATCGCCATCCAGGCCAGCCTGGTTTTCTGTA...CCTGCTGTGTAAACTGCCTTCCTGCCTTAGGCTCCTTGCTTCAAGAAGCCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131031.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCTGGCATCTGGGCTACCTCACTAGCCCTAAGGGGCAGACATGATTTGCCCTCTGAAAAGTGGCAATaGGCACAAGGAACTGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAGIWATSLALRGRHDLPSEKWQ*AQGTGR Trigger: CCTACCAGTTCCTTGTGCCCATTGCCACTTTTCAGA...GGGCAAATCATGTCTGCCCCTTAGGGCTAGTGAGGTAGCCCAGATGCCAGCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
||
| CDS-3UTR TCA 90 bp | TCAAGCTTTACATGGCAGGACTGCGCCCTCACTTCACGTGTCTCCTCAGATGCTTGTAGAAGACTTCCATaGGTTGCATGTGCACGACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSFTWQDCALTSRVSSDACRRLP*VACARQ Trigger: CTGTCGTGCACATGCAACTCATGGAAGTCTTCTACA...AGCATCTGAGGAGACACGTGAAGTGAGGGCGCAGTCCTGCCATGTAAAGCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR CCA 90 bp | TGTCAGAATGATGGAGCGCATCTCTCCAGGCCCCTGGATGGAGAGCGATCAGAAACGCAATCTGAAAAGTaGCAATGGGCACAAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: CQNDGAHLSRPLDGERSETQSEK*QWAQGT Trigger: AGTTCCTTGTGCCCATTGCCACTTTTCAGATTGCGT...TTCTGATCGCTCTCCATCCAGGGGCCTGGAGAGATGCGCTCCATCATTCTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131031.2 |
||
| CDS-3UTR CCA 90 bp | AAGCTTTACATGGCAGGACTGCGCCCTCACTTCACGTGTCTCCTCAGATGCTCCACGCAATCTGAAAAGTaGCAATGGGCACAAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: KLYMAGLRPHFTCLLRCSTQSEK*QWAQGT Trigger: AGTTCCTTGTGCCCATTGCCACTTTTCAGATTGCGT...GGAGCATCTGAGGAGACACGTGAAGTGAGGGCGCAGTCCTGCCATGTAAAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGGCTAAGAGCACTGGCTATTCTTCCAGAGGTACTGAGTTCAATTCCCGACGATCCCAAAGACCAATaGACAGAGCTCTTTAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: QRLRALAILPEVLSSIPDDPKDQ*TELFRQ Trigger: CTGTCTAAAGAGCTCTGTGCATTGGTCTTTGGGATC...GTCGGGAATTGAACTCAGTACCTCTGGAAGAATAGCCAGTGCTCTTAGCCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR TCA 90 bp | GGTACTGAGTTCAATTCCCGACAACCACATGGTGGTTATGAAATCATTTATAATTGCGGGCCGCCATGGTaGCGCTGTAGAAGACTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTEFNSRQPHGGYEIIYNCGPPW*RCRRLP Trigger: TGGAAGTCTTCTACAGCGTCACCATGGCGGCCCGCA...ATTATAAATGATTTCATAACCACCATGTGGTTGTCGGGAATTGAACTCAGTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTCCTCTCTGTAAACAAAGCATCAACAAACAGGAAATGGCTCAGAGGAGGATCTGAAAAGTGGCAATaGGCACAAGGAACTGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLSVNKASTNRKWLRGGSEKWQ*AQGTGR Trigger: CCTACCAGTTCCTTGTGCCCATTGCCACTTTTCAGA...TCCTCCTCTGAGCCATTTCCTGTTTGTTGATGCTTTGTTTACAGAGAGGAGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131031.2 |
||
| CDS-3UTR TCA 90 bp | GGTACTGAGTTCAATTCCCGACAACCACATGGTGGTTATGAAATCATTTATAATAGTAGCCTGAAGAGTTaGAGACCCACCAGAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GTEFNSRQPHGGYEIIYNSSLKS*RPTRGT Trigger: GGTGCCTCTGGTGGGTCTTCAACTCTTCAGGCTACT...ATTATAAATGATTTCATAACCACCATGTGGTTGTCGGGAATTGAACTCAGTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGTTCAATTCCCGACAACCACATGGTGGTTATGAAATCATTTATAATGAGACCTCCCCCAAAGACATaGCACTCAAGTGGGGGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LSSIPDNHMVVMKSFIMRPPPKT*HSSGGL Trigger: TAAGCCCCCACTTGAGTGCCATGTCTTTGGGGGAGG...TCTCATTATAAATGATTTCATAACCACCATGTGGTTGTCGGGAATTGAACTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| CDS-3UTR CCA 90 bp | CAAGTTACTTCTCTCAAGTGTCCAAAACATCTCCTCCTCTCTGTAAACAAAGCACAGATGTCCCGGATCTaGAACATACAGAAAACCAGG | + |
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Preference number: 4 (lower is better) Translates to: QVTSLKCPKHLLLSVNKAQMSRI*NIQKTR Trigger: CCTGGTTTTCTGTATGTTCCAGATCCGGGACATCTG...TGCTTTGTTTACAGAGAGGAGGAGATGTTTTGGACACTTGAGAGAAGTAACTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131031.2 |
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| CDS-3UTR TCA 90 bp | GGTACTGAGTTCAATTCCCGACAACCACATGGTGGTTATGAAATCATTTATAATGATCAGGTAGTAGCCTaGAGAGTTGAAGACCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GTEFNSRQPHGGYEIIYNDQVVA*RVEDPP Trigger: TGGTGGGTCTTCAACTCTTCAGGCTACTACCTGATC...ATTATAAATGATTTCATAACCACCATGTGGTTGTCGGGAATTGAACTCAGTACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| CDS-3UTR TCA 90 bp | CTGAGTTCAATTCCCGACAACCACATGGTGGTTATGAAATCATTTATAATGAGAAGGGAAGACGCAATCTaGAAAGTGGCAATGGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSSIPDNHMVVMKSFIMRREDAI*KVAMGT Trigger: TGTGCCCATTGCCACTTTTCAGATTGCGTCTTCCCT...TCTCATTATAAATGATTTCATAACCACCATGTGGTTGTCGGGAATTGAACTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| CDS-3UTR CCA 90 bp | GGTACTGAGTTCAATTCCCGACAACCACATGGTGGTTATGAAATCATTTATAATTCTGAAAAGTGGCAATaGGCACAAGGAACTGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTEFNSRQPHGGYEIIYNSEKWQ*AQGTGR Trigger: CCTACCAGTTCCTTGTGCCCATTGCCACTTTTCAGA...ATTATAAATGATTTCATAACCACCATGTGGTTGTCGGGAATTGAACTCAGTACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| CDS CCA 90 bp | CTCCTCAGCTCCTGGGCCTGGGCCAGGGGCTGGTGGCGACCACGCTaGCAGTACCTTAAGCCATCCAGCCCCGCCCAGGCAAAGCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: LLSSWAWARGWWRPR*QYLKPSSPAQAKQV Trigger: CACCTGCTTTGCCTGGGCGGGGCTGGATGGCTTAAGGTACTGCCAGCGTGGTCGCCACCAGCCCCTGGCCCAGGCCCAGGAGCTGAGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| CDS CCA 90 bp | GTCTCCAAGGGACTCCTCAGCTCCTGGGCCTGGGCCAGGGGCTGGTaGCGACCACGCTGGCAGTACCTTAAGCCATCCAGCCCCGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VSKGLLSSWAWARGW*RPRWQYLKPSSPAQ Trigger: CTGGGCGGGGCTGGATGGCTTAAGGTACTGCCAGCGTGGTCGCCACCAGCCCCTGGCCCAGGCCCAGGAGCTGAGGAGTCCCTTGGAGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| CDS CCA 90 bp | GAAGTCTCCAAGGGACTCCTCAGCTCCTGGGCCTGGGCCAGGGGCTaGTGGCGACCACGCTGGCAGTACCTTAAGCCATCCAGCCCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: EVSKGLLSSWAWARG*WRPRWQYLKPSSPA Trigger: GGCGGGGCTGGATGGCTTAAGGTACTGCCAGCGTGGTCGCCACCAGCCCCTGGCCCAGGCCCAGGAGCTGAGGAGTCCCTTGGAGACTTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| CDS-3UTR CAA 90 bp | GGAGTCCTGGGTCCTGCTGAGGCCTTACGCCTGAGGGCCCAGGACCAGGCTTCTCCTGCGATGACCAGCTaGGACCACAGAGTCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: GVLGPAEALRLRAQDQASPAMTS*DHRVQR Trigger: CCGCTGGACTCTGTGGTCCAAGCTGGTCATCGCAGG...AGAAGCCTGGTCCTGGGCCCTCAGGCGTAAGGCCTCAGCAGGACCCAGGACTCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131031.2 |
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| CDS TCA 90 bp | GCCCAACACAGAGCTGATGAAGACTCCCAGCAGTACTGCCGCCCGTaGGTAGCTGGCCATGCGCTGGTAGCGGGAGGGGTGCACCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: AQHRADEDSQQYCRP*VAGHALVAGGVHQG Trigger: TCCCTGGTGCACCCCTCCCGCTACCAGCGCATGGCCAGCTACTCACGGGCGGCAGTACTGCTGGGAGTCTTCATCAGCTCTGTGTTGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105410.10 ENSMUST00000132984.2 ENSMUST00000136150.8 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS-3UTR CAA 90 bp | AGGCAACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCCTGCGATGACCAGCTaGGACCACAGAGTCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RQLAPCRLSGPWLASGLPPAMTS*DHRVQR Trigger: CCGCTGGACTCTGTGGTCCAAGCTGGTCATCGCAGG...AGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGTTGCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| CDS-3UTR CAA 90 bp | GCCAGGGCTCCAAGTCCCAAAGGTCCAACCTGGACCTGGACAGGAGCGGGTAGGCCTGCGATGACCAGCTaGGACCACAGAGTCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ARAPSPKGPTWTWTGAGRPAMTS*DHRVQR Trigger: CCGCTGGACTCTGTGGTCCAAGCTGGTCATCGCAGG...CCTACCCGCTCCTGTCCAGGTCCAGGTTGGACCTTTGGGACTTGGAGCCCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| CDS CCA 90 bp | ATCGCTTGCACAGAAGTCTCCAAGGGACTCCTCAGCTCCTGGGCCTaGGCCAGGGGCTGGTGGCGACCACGCTGGCAGTACCTTAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IACTEVSKGLLSSWA*ARGWWRPRWQYLKP Trigger: TGGCTTAAGGTACTGCCAGCGTGGTCGCCACCAGCCCCTGGCCCAGGCCCAGGAGCTGAGGAGTCCCTTGGAGACTTCTGTGCAAGCGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| CDS-3UTR CAA 90 bp | CATCAGGCCCAGGCTGGTTCAGGTGGAGTGCAAACAGGAGGGGCTGCCTCTGAGCCTGCGATGACCAGCTaGGACCACAGAGTCCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: HQAQAGSGGVQTGGAASEPAMTS*DHRVQR Trigger: CCGCTGGACTCTGTGGTCCAAGCTGGTCATCGCAGG...CTCAGAGGCAGCCCCTCCTGTTTGCACTCCACCTGAACCAGCCTGGGCCTGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| CDS GCA 90 bp | GAGGGCTGCGGTCCCCTTAGGTCTCCATCCTGTAGGCTTATCGCTTaGACAGAAGTCTCCAAGGGACTCCTCAGCTCCTGGGCCTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: EGCGPLRSPSCRLIA*TEVSKGLLSSWAWA Trigger: GGCCCAGGCCCAGGAGCTGAGGAGTCCCTTGGAGACTTCTGTGCAAGCGATAAGCCTACAGGATGGAGACCTAAGGGGACCGCAGCCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| CDS GCA 90 bp | CACTTAGCATGCGCACCAGGAAGGAGTCCCTGCAAGTGCCCAGCATaGGATCTAGTTTCCTGGTTTCTGGCCGGTCAGGCCCCGGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HLACAPGRSPCKCPA*DLVSWFLAGQAPGA Trigger: TGCACCCGGGGCCTGACCGGCCAGAAACCAGGAAACTAGATCGCATGCTGGGCACTTGCAGGGACTCCTTCCTGGTGCGCATGCTAAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105410.10 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS CCA 90 bp | CCAGGAAGGAGTCCCTGCAAGTGCCCAGCATGCGATCTAGTTTCCTaGTTTCTGGCCGGTCAGGCCCCGGGTGCATCTGATCCAGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PGRSPCKCPACDLVS*FLAGQAPGASDPAH Trigger: GTGAGCTGGATCAGATGCACCCGGGGCCTGACCGGCCAGAAACCAGGAAACTAGATCGCATGCTGGGCACTTGCAGGGACTCCTTCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105410.10 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS CCA 90 bp | CAACAGCCACACGCACACGAAGCTCAGGCACTGCAGGACCAAGACTaGCTTGTATCGCAGGTAGTCGGTGAGCAGGAAGACCGGGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: QQPHAHEAQALQDQD*LVSQVVGEQEDRDQ Trigger: CTGGTCCCGGTCTTCCTGCTCACCGACTACCTGCGATACAAGCCAGTCTTGGTCCTGCAGTGCCTGAGCTTCGTGTGCGTGTGGCTGTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105410.10 ENSMUST00000132984.2 ENSMUST00000136150.8 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS TCA 90 bp | ACATACAGAAAACCAGGCTGGCCTGGATGGCGATCACACCTGCGATaGCCAGCTTGGACCACAGAGTCCAGCGGATGCTCAGGAAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TYRKPGWPGWRSHLR*PAWTTESSGCSGSR Trigger: CCGGCTTCCTGAGCATCCGCTGGACTCTGTGGTCCAAGCTGGTCATCGCAGGTGTGATCGCCATCCAGGCCAGCCTGGTTTTCTGTATGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105410.10 ENSMUST00000131031.2 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS-3UTR CAA 90 bp | TGGCACGTGGTTCACAAAGCCAGGGAGCTGCCCTTGAGTGTCGGTAGCAGGCTAGAGACGCAGCTGTGGTaGCCGAGCATTTTCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: WHVVHKARELPLSVGSRLETQLW*PSIFHQ Trigger: CTGGTGGAAAATGCTCGGCAACCACAGCTGCGTCTC...TAGCCTGCTACCGACACTCAAGGGCAGCTCCCTGGCTTTGTGAACCACGTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| CDS TCA 90 bp | AGTCTCTGTCCCCTGACAGTGAAGCACACCAGGAGGCCCTCACCATaGCCACATGATGGGCTTCCCTCCCCCAAAGACATGGCACTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLCPLTVKHTRRPSP*PHDGLPSPKDMALK Trigger: CTTGAGTGCCATGTCTTTGGGGGAGGGAAGCCCATCATGTGGTCATGGTGAGGGCCTCCTGGTGTGCTTCACTGTCAGGGGACAGAGACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| CDS GCA 90 bp | CTCCAAATGTGGGCCACACTCTGCATACTCCAGGGACAATGGACCTaGAGTCTCTGTCCCCTGACAGTGAAGCACACCAGGAGGCCCTCA | + |
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Preference number: 5 (lower is better) Translates to: LQMWATLCILQGQWT*SLCPLTVKHTRRPS Trigger: TGAGGGCCTCCTGGTGTGCTTCACTGTCAGGGGACAGAGACTGCAGGTCCATTGTCCCTGGAGTATGCAGAGTGTGGCCCACATTTGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| CDS-3UTR CAA 90 bp | GGAGTCCTGGGTCCTGCTGAGGCCTTACGCCTGAGGGCCCAGGACCAGGCTTCTGTAGCTAGGAAAGTGTaGATCCCAAAGACCAATGCA | + |
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Preference number: 5 (lower is better) Translates to: GVLGPAEALRLRAQDQASVARKV*IPKTNA Trigger: TGCATTGGTCTTTGGGATCAACACTTTCCTAGCTAC...AGAAGCCTGGTCCTGGGCCCTCAGGCGTAAGGCCTCAGCAGGACCCAGGACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131031.2 |
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| CDS GCA 90 bp | GACGCAGCTGTGGTTGCCGAGCATTTTCCACCAGTTCACTTAGCATaGGCACCAGGAAGGAGTCCCTGCAAGTGCCCAGCATGCGATCTA | + |
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Preference number: 5 (lower is better) Translates to: DAAVVAEHFPPVHLA*APGRSPCKCPACDL Trigger: TAGATCGCATGCTGGGCACTTGCAGGGACTCCTTCCTGGTGCGCATGCTAAGTGAACTGGTGGAAAATGCTCGGCAACCACAGCTGCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105410.10 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS GCA 90 bp | CTGGAACATACAGAAAACCAGGCTGGCCTGGATGGCGATCACACCTaGGATGACCAGCTTGGACCACAGAGTCCAGCGGATGCTCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: LEHTENQAGLDGDHT*DDQLGPQSPADAQE Trigger: TTCCTGAGCATCCGCTGGACTCTGTGGTCCAAGCTGGTCATCGCAGGTGTGATCGCCATCCAGGCCAGCCTGGTTTTCTGTATGTTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105410.10 ENSMUST00000131031.2 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS CCA 90 bp | ACCCAGATGTCCCGGATCTGGAACATACAGAAAACCAGGCTGGCCTaGATGGCGATCACACCTGCGATGACCAGCTTGGACCACAGAGTC | + |
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Preference number: 5 (lower is better) Translates to: TQMSRIWNIQKTRLA*MAITPAMTSLDHRV Trigger: GACTCTGTGGTCCAAGCTGGTCATCGCAGGTGTGATCGCCATCCAGGCCAGCCTGGTTTTCTGTATGTTCCAGATCCGGGACATCTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105410.10 ENSMUST00000131031.2 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS CCA 90 bp | TTCCTGCTCCAAATGTGGGCCACACTCTGCATACTCCAGGGACAATaGACCTGCAGTCTCTGTCCCCTGACAGTGAAGCACACCAGGAGG | + |
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Preference number: 5 (lower is better) Translates to: FLLQMWATLCILQGQ*TCSLCPLTVKHTRR Trigger: CCTCCTGGTGTGCTTCACTGTCAGGGGACAGAGACTGCAGGTCCATTGTCCCTGGAGTATGCAGAGTGTGGCCCACATTTGGAGCAGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| CDS-3UTR CAA 90 bp | ACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCACTAGAAGACTTCCATGAGTaGCATGTGCACGACAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: TGTLQAQRTLAGIWATSLEDFHE*HVHDRC Trigger: ACATCTGTCGTGCACATGCAACTCATGGAAGTCTTC...TAGTGAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| CDS-3UTR CAA 90 bp | CGACTGGGAGCACTGTGTGTAGCATCAGGCCCAGGCTGGTTCAGGTGGAGTGCAGAAGACTTCCATGAGTaGCATGTGCACGACAGATGT | + |
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Preference number: 5 (lower is better) Translates to: RLGALCVASGPGWFRWSAEDFHE*HVHDRC Trigger: ACATCTGTCGTGCACATGCAACTCATGGAAGTCTTC...TGCACTCCACCTGAACCAGCCTGGGCCTGATGCTACACACAGTGCTCCCAGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| CDS-3UTR CAA 90 bp | TCAAGCTTTACATGGCAGGACTGCGCCCTCACTTCACGTGTCTCCTCAGATGCTGAGACGCAGCTGTGGTaGCCGAGCATTTTCCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSFTWQDCALTSRVSSDAETQLW*PSIFHQ Trigger: CTGGTGGAAAATGCTCGGCAACCACAGCTGCGTCTC...AGCATCTGAGGAGACACGTGAAGTGAGGGCGCAGTCCTGCCATGTAAAGCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| CDS-3UTR CAA 90 bp | ACTGGCACCCTGCAGGCTCAGCGGACCTTGGCTGGCATCTGGGCTACCTCACTAGTAGCTAGGAAAGTGTaGATCCCAAAGACCAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: TGTLQAQRTLAGIWATSLVARKV*IPKTNA Trigger: TGCATTGGTCTTTGGGATCAACACTTTCCTAGCTAC...TAGTGAGGTAGCCCAGATGCCAGCCAAGGTCCGCTGAGCCTGCAGGGTGCCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| CDS-3UTR CAA 90 bp | CGACTGGGAGCACTGTGTGTAGCATCAGGCCCAGGCTGGTTCAGGTGGAGTGCAGTAGCTAGGAAAGTGTaGATCCCAAAGACCAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: RLGALCVASGPGWFRWSAVARKV*IPKTNA Trigger: TGCATTGGTCTTTGGGATCAACACTTTCCTAGCTAC...TGCACTCCACCTGAACCAGCCTGGGCCTGATGCTACACACAGTGCTCCCAGTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| CDS-3UTR CAA 90 bp | GGCCAATGCTATCTGATACCAGCTCCAACCAAGGGGTTCTGCCTAGCTCCCTCCGAAGACTTCCATGAGTaGCATGTGCACGACAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: GQCYLIPAPTKGFCLAPSEDFHE*HVHDRC Trigger: ACATCTGTCGTGCACATGCAACTCATGGAAGTCTTC...GGAGGGAGCTAGGCAGAACCCCTTGGTTGGAGCTGGTATCAGATAGCATTGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| CDS-3UTR CAA 90 bp | AAGCTTTACATGGCAGGACTGCGCCCTCACTTCACGTGTCTCCTCAGATGCTCCGTAGCTAGGAAAGTGTaGATCCCAAAGACCAATGCA | + |
|
Preference number: 5 (lower is better) Translates to: KLYMAGLRPHFTCLLRCSVARKV*IPKTNA Trigger: TGCATTGGTCTTTGGGATCAACACTTTCCTAGCTAC...GGAGCATCTGAGGAGACACGTGAAGTGAGGGCGCAGTCCTGCCATGTAAAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| CDS CCA 72 bp | GGACTCCTCAGCTCCTGGGCCTGGGCCAGGGGCTGGTaGCGACCACGCTGGCAGTACCTTAAGCCATCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GLLSSWAWARGW*RPRWQYLKPSS Trigger: GCTGGATGGCTTAAGGTACTGCCAGCGTGGTCGCCACCAGCCCCTGGCCCAGGCCCAGGAGCTGAGGAGTCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| CDS CCA 72 bp | AAGGGACTCCTCAGCTCCTGGGCCTGGGCCAGGGGCTaGTGGCGACCACGCTGGCAGTACCTTAAGCCATCC | + |
|
Preference number: 6 (lower is better) Translates to: KGLLSSWAWARG*WRPRWQYLKPS Trigger: GGATGGCTTAAGGTACTGCCAGCGTGGTCGCCACCAGCCCCTGGCCCAGGCCCAGGAGCTGAGGAGTCCCTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| CDS TCA 72 bp | TTCCTGGTTTCTGGCCGGTCAGGCCCCGGGTGCATCTaGTCCAGCTCACAGGGCAAGGCTCCACGCGCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: FLVSGRSGPGCI*SSSQGKAPRAS Trigger: GCTTGCGCGTGGAGCCTTGCCCTGTGAGCTGGATCAGATGCACCCGGGGCCTGACCGGCCAGAAACCAGGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105410.10 ENSMUST00000136150.8 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS TCA 72 bp | TCCAGCGGATGCTCAGGAAGCCGGCGGAGAAGGACGTaGTGGCGCTCAGCAGTGTGGAGGCGGCATCTACGG | + |
|
Preference number: 6 (lower is better) Translates to: SSGCSGSRRRRT*WRSAVWRRHLR Trigger: CCGTAGATGCCGCCTCCACACTGCTGAGCGCCATCACGTCCTTCTCCGCCGGCTTCCTGAGCATCCGCTGGA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000105410.10 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS TCA 72 bp | AGAGCTGATGAAGACTCCCAGCAGTACTGCCGCCCGTaGGTAGCTGGCCATGCGCTGGTAGCGGGAGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RADEDSQQYCRP*VAGHALVAGGV Trigger: CACCCCTCCCGCTACCAGCGCATGGCCAGCTACTCACGGGCGGCAGTACTGCTGGGAGTCTTCATCAGCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000105410.10 ENSMUST00000132984.2 ENSMUST00000136150.8 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS TCA 72 bp | GCAGGACCAAGACTGGCTTGTATCGCAGGTAGTCGGTaGGCAGGAAGACCGGGACCAGCACAGCCAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGPRLACIAGSR*AGRPGPAQPGG Trigger: CCCACCTGGCTGTGCTGGTCCCGGTCTTCCTGCTCACCGACTACCTGCGATACAAGCCAGTCTTGGTCCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105410.10 ENSMUST00000132984.2 ENSMUST00000136150.8 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS CAA 90 bp | GGCGATGCGGGCCGCCATGGTGACGCTGTAGAAGACTTCCATGAGTaGCATGTGCACGACAGATGTGCCCAGCAGCAGCAACAGCCACAC | + |
|
Preference number: 6 (lower is better) Translates to: GDAGRHGDAVEDFHE*HVHDRCAQQQQQPH Trigger: GTGTGGCTGTTGCTGCTGCTGGGCACATCTGTCGTGCACATGCAACTCATGGAAGTCTTCTACAGCGTCACCATGGCGGCCCGCATCGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105410.10 ENSMUST00000132984.2 ENSMUST00000136150.8 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS TCA 72 bp | AAACCAGGCTGGCCTGGATGGCGATCACACCTGCGATaGCCAGCTTGGACCACAGAGTCCAGCGGATGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: KPGWPGWRSHLR*PAWTTESSGCS Trigger: TGAGCATCCGCTGGACTCTGTGGTCCAAGCTGGTCATCGCAGGTGTGATCGCCATCCAGGCCAGCCTGGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000105410.10 ENSMUST00000131031.2 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS TCA 72 bp | CCCCTGACAGTGAAGCACACCAGGAGGCCCTCACCATaGCCACATGATGGGCTTCCCTCCCCCAAAGACATG | + |
|
Preference number: 6 (lower is better) Translates to: PLTVKHTRRPSP*PHDGLPSPKDM Trigger: CATGTCTTTGGGGGAGGGAAGCCCATCATGTGGTCATGGTGAGGGCCTCCTGGTGTGCTTCACTGTCAGGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| CDS GCA 72 bp | TGGCTTCGACTCTTAAGTCTCCCCTGTCGTCCTCCATaGCATCCTCTGAGAGCAGCTGTGGCGCTGAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: WLRLLSLPCRPP*HPLRAAVALRA Trigger: AGCCCTCAGCGCCACAGCTGCTCTCAGAGGATGGCATGGAGGACGACAGGGGAGACTTAAGAGTCGAAGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| CDS CCA 72 bp | CCAGGCATCGCCAGGATTTCAGTTCGTGGTCCTGCCTaGGCTCTTCGTATGCCTGCTTTTCTGCCACCTGGC | + |
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Preference number: 6 (lower is better) Translates to: PGIARISVRGPA*ALRMPAFLPPG Trigger: GCCAGGTGGCAGAAAAGCAGGCATACGAAGAGCCCAGGCAGGACCACGAACTGAAATCCTGGCGATGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000105410.10 ENSMUST00000130703.8 ENSMUST00000132984.2 ENSMUST00000133059.8 ENSMUST00000136150.8 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS CCA 72 bp | AGTCCCTGCAAGTGCCCAGCATGCGATCTAGTTTCCTaGTTTCTGGCCGGTCAGGCCCCGGGTGCATCTGAT | + |
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Preference number: 6 (lower is better) Translates to: SPCKCPACDLVS*FLAGQAPGASD Trigger: ATCAGATGCACCCGGGGCCTGACCGGCCAGAAACCAGGAAACTAGATCGCATGCTGGGCACTTGCAGGGACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000105410.10 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS GCA 72 bp | ACAGAAAACCAGGCTGGCCTGGATGGCGATCACACCTaGGATGACCAGCTTGGACCACAGAGTCCAGCGGAT | + |
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Preference number: 6 (lower is better) Translates to: TENQAGLDGDHT*DDQLGPQSPAD Trigger: ATCCGCTGGACTCTGTGGTCCAAGCTGGTCATCGCAGGTGTGATCGCCATCCAGGCCAGCCTGGTTTTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000105410.10 ENSMUST00000131031.2 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS CCA 72 bp | CACGCACACGAAGCTCAGGCACTGCAGGACCAAGACTaGCTTGTATCGCAGGTAGTCGGTGAGCAGGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: HAHEAQALQDQD*LVSQVVGEQED Trigger: GTCTTCCTGCTCACCGACTACCTGCGATACAAGCCAGTCTTGGTCCTGCAGTGCCTGAGCTTCGTGTGCGTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000105410.10 ENSMUST00000132984.2 ENSMUST00000136150.8 ENSMUST00000136925.8 ENSMUST00000144234.8 |
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| CDS TCA 72 bp | AGTGAAGCACACCAGGAGGCCCTCACCATGACCACATaGTGGGCTTCCCTCCCCCAAAGACATGGCACTCAA | + |
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Preference number: 6 (lower is better) Translates to: SEAHQEALTMTT*WASLPQRHGTQ Trigger: TTGAGTGCCATGTCTTTGGGGGAGGGAAGCCCATCATGTGGTCATGGTGAGGGCCTCCTGGTGTGCTTCACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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| CDS GCA 72 bp | GGTCCCCTTAGGTCTCCATCCTGTAGGCTTATCGCTTaGACAGAAGTCTCCAAGGGACTCCTCAGCTCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GPLRSPSCRLIA*TEVSKGLLSSW Trigger: CCAGGAGCTGAGGAGTCCCTTGGAGACTTCTGTGCAAGCGATAAGCCTACAGGATGGAGACCTAAGGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105410.10 ENSMUST00000144234.8 |
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| CDS CCA 72 bp | CATGACCACATGATGGGCTTCCCTCCCCCAAAGACATaGCACTCAAGTGGGGGCTTACCTGATCACGGACTT | + |
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Preference number: 6 (lower is better) Translates to: HDHMMGFPPPKT*HSSGGLPDHGL Trigger: AAGTCCGTGATCAGGTAAGCCCCCACTTGAGTGCCATGTCTTTGGGGGAGGGAAGCCCATCATGTGGTCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000136925.8 |
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