Pregenerated sensors for SLC18B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037455Ensembl transcript IDs: ENSMUST00000119597.8, ENSMUST00000127841.2, ENSMUST00000133289.2, ENSMUST00000134170.8, ENSMUST00000179321.8
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTGTGGGTGCAGGAAGCACGGATCACAGGAAGCTCCTCCAGCCACTaGAGTCACAGTCAAGGCACCTGTCTCTGGATCTGGATCAATCCA | + |
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Preference number: 1 (lower is better) Translates to: VWVQEARITGSSSSH*SHSQGTCLWIWINP Trigger: TGGATTGATCCAGATCCAGAGACAGGTGCCTTGACTGTGACTGCAGTGGCTGGAGGAGCTTCCTGTGATCCGTGCTTCCTGCACCCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR CCA 90 bp | CCTGACGGGCAAGGTCGGTCTTTTAGAAACACTGCTCCGGTTGGCTaGTTTGCCCTTTCTCATAGATGTTGCCTTGGTGAGCCAGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: PDGQGRSFRNTAPVG*FALSHRCCLGEPAF Trigger: GAAAGCTGGCTCACCAAGGCAACATCTATGAGAAAGGGCAAACCAGCCAACCGGAGCAGTGTTTCTAAAAGACCGACCTTGCCCGTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR CCA 90 bp | TGGTTTGCCCTTTCTCATAGATGTTGCCTTGGTGAGCCAGCTTTCTaGAACTACAGGAAGCAGAGAATGGCTCCCGGTCATGTAAATGCA | + |
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Preference number: 1 (lower is better) Translates to: WFALSHRCCLGEPAF*NYRKQRMAPGHVNA Trigger: TGCATTTACATGACCGGGAGCCATTCTCTGCTTCCTGTAGTTCCAGAAAGCTGGCTCACCAAGGCAACATCTATGAGAAAGGGCAAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR TCA 90 bp | CAAGGAGCTGAAGGGATCTGCAACCCTATAGGTGGAACAAAATTATaGACTAACCAGTACCCTGGAGCTCTTGACTCTAGCTGCATATGT | + |
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Preference number: 1 (lower is better) Translates to: QGAEGICNPIGGTKL*TNQYPGALDSSCIC Trigger: ACATATGCAGCTAGAGTCAAGAGCTCCAGGGTACTGGTTAGTTCATAATTTTGTTCCACCTATAGGGTTGCAGATCCCTTCAGCTCCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR-3UTR CCA 90 bp | CACGACTCGCTTACCTGGGCGGAGGCAGGTGTGGCCCTGCCTCGTGATGGAACACTCACAGTCAACTATTaGATGGATCACAGGGCCCCC | + |
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Preference number: 2 (lower is better) Translates to: HDSLTWAEAGVALPRDGTLTVNY*MDHRAP Trigger: GGGGGCCCTGTGATCCATCCAATAGTTGACTGTGAG...TGTTCCATCACGAGGCAGGGCCACACCTGCCTCCGCCCAGGTAAGCGAGTCGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR-3UTR CCA 90 bp | ATCACAGGGCCCCCAATGGAGGAGCTAGAGAAAATACCCAAGGAGCTGAAGGGACGCCAGGGCCAAAAGTaGGAGTGGGTGGGTAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: ITGPPMEELEKIPKELKGRQGQK*EWVGRG Trigger: GCCCCTACCCACCCACTCCCACTTTTGGCCCTGGCG...TCCCTTCAGCTCCTTGGGTATTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR-3UTR GCA 90 bp | TGCCTTGGTGAGCCAGCTTTCTGGAACTACAGGAAGCAGAGAATGGCTCCCGGTCTTCCAGGGTGTGGGTaGAGGAAGCACGGATCACAG | + |
|
Preference number: 2 (lower is better) Translates to: CLGEPAFWNYRKQRMAPGLPGCG*RKHGSQ Trigger: CTGTGATCCGTGCTTCCTGCACCCACACCCTGGAAG...ACCGGGAGCCATTCTCTGCTTCCTGTAGTTCCAGAAAGCTGGCTCACCAAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR-3UTR GCA 90 bp | GAGCCAGCTTTCTGGAACTACAGGAAGCAGAGAATGGCTCCCGGTCATGTAAATCTTCCAGGGTGTGGGTaGAGGAAGCACGGATCACAG | + |
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Preference number: 2 (lower is better) Translates to: EPAFWNYRKQRMAPGHVNLPGCG*RKHGSQ Trigger: CTGTGATCCGTGCTTCCTGCACCCACACCCTGGAAG...ATTTACATGACCGGGAGCCATTCTCTGCTTCCTGTAGTTCCAGAAAGCTGGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR CAA 90 bp | AAAAACCTGACGGGCAAGGTCGGTCTTTTAGAAACACTGCTCCGGTaGGCTGGTTTGCCCTTTCTCATAGATGTTGCCTTGGTGAGCCAG | + |
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Preference number: 2 (lower is better) Translates to: KNLTGKVGLLETLLR*AGLPFLIDVALVSQ Trigger: CTGGCTCACCAAGGCAACATCTATGAGAAAGGGCAAACCAGCCAACCGGAGCAGTGTTTCTAAAAGACCGACCTTGCCCGTCAGGTTTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR-3UTR CCA 90 bp | ATCACAGGGCCCCCAATGGAGGAGCTAGAGAAAATACCCAAGGAGCTGAAGGGAATATGTAGCAGAAGATaGCCTAGTCGGCCATCACTG | + |
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Preference number: 2 (lower is better) Translates to: ITGPPMEELEKIPKELKGICSRR*PSRPSL Trigger: CAGTGATGGCCGACTAGGCCATCTTCTGCTACATAT...TCCCTTCAGCTCCTTGGGTATTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTACTATTCTCACCAGAAAACACATGGCAATGAATATCGGTCCTTCCGGAAGGCAGACAGATCTCTGTaGGCTCCAAGCCAGTCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: VYYSHQKTHGNEYRSFRKADRSL*APSQSS Trigger: ACTTGACTGGCTTGGAGCTCACAGAGATCTGTCTGC...CTTCCGGAAGGACCGATATTCATTGCCATGTGTTTTCTGGTGAGAATAGTAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134170.8 |
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| 3UTR-3UTR CCA 90 bp | TATATGGTAGGCAGGAATTTTGCCTTTTTGACGAGTACAAACTTCAGTGTAGAGGACACTTCCAGGGTGTaGGTGCAGGAAGCACGGATC | + |
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Preference number: 2 (lower is better) Translates to: YMVGRNFAFLTSTNFSVEDTSRV*VQEARI Trigger: GATCCGTGCTTCCTGCACCCACACCCTGGAAGTGTC...CTCTACACTGAAGTTTGTACTCGTCAAAAAGGCAAAATTCCTGCCTACCATATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR-3UTR CCA 90 bp | TTGACGAGTACAAACTTCAGTGTAGAGGAAGGCCATCTTTCAAAACCGGTTTCACAAGGCACCTGTCTCTaGATCTGGATCAATCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LTSTNFSVEEGHLSKPVSQGTCL*IWINPE Trigger: CTCTGGATTGATCCAGATCCAGAGACAGGTGCCTTG...TGAAACCGGTTTTGAAAGATGGCCTTCCTCTACACTGAAGTTTGTACTCGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR-3UTR CCA 90 bp | TTGACGAGTACAAACTTCAGTGTAGAGGAAGGCCATCTTTCAAAACCGGTTTCAACTGCTCCGGTTGGCTaGTTTGCCCTTTCTCATAGA | + |
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Preference number: 2 (lower is better) Translates to: LTSTNFSVEEGHLSKPVSTAPVG*FALSHR Trigger: TCTATGAGAAAGGGCAAACCAGCCAACCGGAGCAGT...TGAAACCGGTTTTGAAAGATGGCCTTCCTCTACACTGAAGTTTGTACTCGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR-3UTR TCA 90 bp | TTAGAAAAACTGAAAGCCAAGAAATGCTCTGGACTGGGGCCTAGCAAACATATACATGTAAATGCAGCTTaGCACTTCCAGGGTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: LEKLKAKKCSGLGPSKHIHVNAA*HFQGVG Trigger: ACCCACACCCTGGAAGTGTCAAGCTGCATTTACATG...TATATGTTTGCTAGGCCCCAGTCCAGAGCATTTCTTGGCTTTCAGTTTTTCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR-3UTR TCA 90 bp | TATATGGTAGGCAGGAATTTTGCCTTTTTGACGAGTACAAACTTCAGTGTAGAGCATGTAAATGCAGCTTaGCACTTCCAGGGTGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: YMVGRNFAFLTSTNFSVEHVNAA*HFQGVG Trigger: ACCCACACCCTGGAAGTGTCAAGCTGCATTTACATG...CTCTACACTGAAGTTTGTACTCGTCAAAAAGGCAAAATTCCTGCCTACCATATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAATACCCAAGGAGCTGAAGGGATCTGCAACCCTATAGGTGGAACAAAATTAGGAGTGAACTTGGGGTaGAAAGTGAACACAAGAATA | + |
|
Preference number: 2 (lower is better) Translates to: ENTQGAEGICNPIGGTKLGVNLG*KVNTRI Trigger: TATTCTTGTGTTCACTTTTCACCCCAAGTTCACTCC...TAATTTTGTTCCACCTATAGGGTTGCAGATCCCTTCAGCTCCTTGGGTATTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR-3UTR GCA 90 bp | TTAGAAAAACTGAAAGCCAAGAAATGCTCTGGACTGGGGCCTAGCAAACATATACATACAAACTTTATATaGCCCAGTACAGGGGAACGC | + |
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Preference number: 2 (lower is better) Translates to: LEKLKAKKCSGLGPSKHIHTNFI*PSTGER Trigger: GCGTTCCCCTGTACTGGGGCATATAAAGTTTGTATG...TATATGTTTGCTAGGCCCCAGTCCAGAGCATTTCTTGGCTTTCAGTTTTTCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR-3UTR CAA 90 bp | CACGACTCGCTTACCTGGGCGGAGGCAGGTGTGGCCCTGCCTCGTGATGGAACAGCTCACAGTCAACTATaGGATGGATCACAGGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: HDSLTWAEAGVALPRDGTAHSQL*DGSQGP Trigger: GGGGCCCTGTGATCCATCCAATAGTTGACTGTGAGC...TGTTCCATCACGAGGCAGGGCCACACCTGCCTCCGCCCAGGTAAGCGAGTCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR GCA 72 bp | CAGGAAGCACGGATCACAGGAAGCTCCTCCAGCCACTaGAGTCACAGTCAAGGCACCTGTCTCTGGATCTGG | + |
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Preference number: 3 (lower is better) Translates to: QEARITGSSSSH*SHSQGTCLWIW Trigger: CCAGATCCAGAGACAGGTGCCTTGACTGTGACTGCAGTGGCTGGAGGAGCTTCCTGTGATCCGTGCTTCCTG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR GCA 72 bp | ACGACTCGCTTACCTGGGCGGAGGCAGGTGTGGCCCTaGCTCGTGATGGAACACATTTCCCAAGAGTACGAA | + |
|
Preference number: 3 (lower is better) Translates to: TTRLPGRRQVWP*LVMEHISQEYE Trigger: TTCGTACTCTTGGGAAATGTGTTCCATCACGAGGCAGGGCCACACCTGCCTCCGCCCAGGTAAGCGAGTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR-3UTR CAA 90 bp | CTTACCTGGGCGGAGGCAGGTGTGGCCCTGCCTCGTGATGGAACACATTTCCCACTCATAGATGTTGCCTaGGTGAGCCAGCTTTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: LTWAEAGVALPRDGTHFPLIDVA*VSQLSG Trigger: TCCAGAAAGCTGGCTCACCAAGGCAACATCTATGAG...TGGGAAATGTGTTCCATCACGAGGCAGGGCCACACCTGCCTCCGCCCAGGTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR TCA 72 bp | GCTTACCTGGGCGGAGGCAGGTGTGGCCCTGCCTCGTaGTGGAACACATTTCCCAAGAGTACGAAAAGTAGT | + |
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Preference number: 3 (lower is better) Translates to: AYLGGGRCGPAS*WNTFPKSTKSS Trigger: ACTACTTTTCGTACTCTTGGGAAATGTGTTCCATCACGAGGCAGGGCCACACCTGCCTCCGCCCAGGTAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR GCA 72 bp | TCATGTAAATGCAGCTTGACACTTCCAGGGTGTGGGTaGAGGAAGCACGGATCACAGGAAGCTCCTCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: SCKCSLTLPGCG*RKHGSQEAPPA Trigger: GGCTGGAGGAGCTTCCTGTGATCCGTGCTTCCTGCACCCACACCCTGGAAGTGTCAAGCTGCATTTACATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR TCA 72 bp | AAGCAGAGAATGGCTCCCGGTCATGTAAATGCAGCTTaGCACTTCCAGGGTGTGGGTGCAGGAAGCACGGAT | + |
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Preference number: 3 (lower is better) Translates to: KQRMAPGHVNAA*HFQGVGAGSTD Trigger: ATCCGTGCTTCCTGCACCCACACCCTGGAAGTGTCAAGCTGCATTTACATGACCGGGAGCCATTCTCTGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR GCA 72 bp | CTACAGGAAGCAGAGAATGGCTCCCGGTCATGTAAATaGAGCTTGACACTTCCAGGGTGTGGGTGCAGGAAG | + |
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Preference number: 3 (lower is better) Translates to: LQEAENGSRSCK*SLTLPGCGCRK Trigger: CTTCCTGCACCCACACCCTGGAAGTGTCAAGCTGCATTTACATGACCGGGAGCCATTCTCTGCTTCCTGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR CCA 72 bp | GGAGCTCTTGACTCTAGCTGCATATGTAGCAGAAGATaGCCTAGTCGGCCATCACTGGAAAGAGAGGCCCAT | + |
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Preference number: 3 (lower is better) Translates to: GALDSSCICSRR*PSRPSLEREAH Trigger: ATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCTTCTGCTACATATGCAGCTAGAGTCAAGAGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR GCA 72 bp | TGGAAAGAGAGGCCCATTGGACATACAAACTTTATATaGCCCAGTACAGGGGAACGCCAGGGCCAAAAGTGG | + |
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Preference number: 3 (lower is better) Translates to: WKERPIGHTNFI*PSTGERQGQKW Trigger: CCACTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGTATGTCCAATGGGCCTCTCTTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR CCA 72 bp | CAAGGTCGGTCTTTTAGAAACACTGCTCCGGTTGGCTaGTTTGCCCTTTCTCATAGATGTTGCCTTGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: QGRSFRNTAPVG*FALSHRCCLGE Trigger: CTCACCAAGGCAACATCTATGAGAAAGGGCAAACCAGCCAACCGGAGCAGTGTTTCTAAAAGACCGACCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR TCA 72 bp | GAAGGGATCTGCAACCCTATAGGTGGAACAAAATTATaGACTAACCAGTACCCTGGAGCTCTTGACTCTAGC | + |
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Preference number: 3 (lower is better) Translates to: EGICNPIGGTKL*TNQYPGALDSS Trigger: GCTAGAGTCAAGAGCTCCAGGGTACTGGTTAGTTCATAATTTTGTTCCACCTATAGGGTTGCAGATCCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR CCA 72 bp | AAACATATAAGTGGATGCTCACAGTCAACTATTGGATaGATCACAGGGCCCCCAATGGAGGAGCTAGAGAAA | + |
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Preference number: 3 (lower is better) Translates to: KHISGCSQSTIG*ITGPPMEELEK Trigger: TTTCTCTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGTTGACTGTGAGCATCCACTTATATGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS-3UTR GCA 90 bp | CTCCAGCCACTGCAGTCACAGTCAAGGCACCTGTCTCTGGATCTGGATCAATCCACCTCCTCCTGTCCCTaGAGGAGCCGGGGAGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: LQPLQSQSRHLSLDLDQSTSSCP*RSRGAR Trigger: GCGGGCTCCCCGGCTCCTGCAGGGACAGGAGGAGGT...GGATTGATCCAGATCCAGAGACAGGTGCCTTGACTGTGACTGCAGTGGCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS-3UTR GCA 90 bp | TGCCTTGGTGAGCCAGCTTTCTGGAACTACAGGAAGCAGAGAATGGCTCCCGGTACCTCCTCCTGTCCCTaGAGGAGCCGGGGAGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: CLGEPAFWNYRKQRMAPGTSSCP*RSRGAR Trigger: GCGGGCTCCCCGGCTCCTGCAGGGACAGGAGGAGGT...ACCGGGAGCCATTCTCTGCTTCCTGTAGTTCCAGAAAGCTGGCTCACCAAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS-3UTR GCA 90 bp | TTTTGTATCAGCATTCCGAGGCAGAGGCAGACAGATCTCTGTGAGCTCCAAGCCACCTCCTCCTGTCCCTaGAGGAGCCGGGGAGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: FCISIPRQRQTDLCELQATSSCP*RSRGAR Trigger: GCGGGCTCCCCGGCTCCTGCAGGGACAGGAGGAGGT...GGCTTGGAGCTCACAGAGATCTGTCTGCCTCTGCCTCGGAATGCTGATACAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134170.8 |
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| CDS-3UTR GCA 90 bp | CACGACTCGCTTACCTGGGCGGAGGCAGGTGTGGCCCTGCCTCGTGATGGAACAAGAGTCCATAAGCCTTaGATAGCTGCTGCCCACTCG | + |
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Preference number: 4 (lower is better) Translates to: HDSLTWAEAGVALPRDGTRVHKP*IAAAHS Trigger: CGAGTGGGCAGCAGCTATGCAAGGCTTATGGACTCT...TGTTCCATCACGAGGCAGGGCCACACCTGCCTCCGCCCAGGTAAGCGAGTCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS-3UTR CCA 90 bp | CTTACCTGGGCGGAGGCAGGTGTGGCCCTGCCTCGTGATGGAACACATTTCCCAAAAGAGAGACAGGGTTaGGTCCAGGAAGCCGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: LTWAEAGVALPRDGTHFPKERQG*VQEAEA Trigger: TGCTTCGGCTTCCTGGACCCAACCCTGTCTCTCTTT...TGGGAAATGTGTTCCATCACGAGGCAGGGCCACACCTGCCTCCGCCCAGGTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS-3UTR GCA 90 bp | CACGACTCGCTTACCTGGGCGGAGGCAGGTGTGGCCCTGCCTCGTGATGGAACATTCCAATCATGGTGTTaGTGGCTCCCTTCTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: HDSLTWAEAGVALPRDGTFQSWC*WLPSFL Trigger: CAGAAAAGAAGGGAGCCAGCAACACCATGATTGGAA...TGTTCCATCACGAGGCAGGGCCACACCTGCCTCCGCCCAGGTAAGCGAGTCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS-3UTR GCA 90 bp | AGCACGGATCACAGGAAGCTCCTCCAGCCACTGCAGTCACAGTCAAGGCACCTGAGAGTCCATAAGCCTTaGATAGCTGCTGCCCACTCG | + |
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Preference number: 4 (lower is better) Translates to: STDHRKLLQPLQSQSRHLRVHKP*IAAAHS Trigger: CGAGTGGGCAGCAGCTATGCAAGGCTTATGGACTCT...CAGGTGCCTTGACTGTGACTGCAGTGGCTGGAGGAGCTTCCTGTGATCCGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS-3UTR TCA 90 bp | AGCACGGATCACAGGAAGCTCCTCCAGCCACTGCAGTCACAGTCAAGGCACCTGGCCAGAGCTGACTTTTaGTGTGCAGAAGAGGAACAG | + |
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Preference number: 4 (lower is better) Translates to: STDHRKLLQPLQSQSRHLARADF*CAEEEQ Trigger: CTGTTCCTCTTCTGCACATCAAAAGTCAGCTCTGGC...CAGGTGCCTTGACTGTGACTGCAGTGGCTGGAGGAGCTTCCTGTGATCCGTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| 3UTR CAA 72 bp | GAAGCAGAGAATGGCTCCCGGTCATGTAAATGCAGCTaGACACTTCCAGGGTGTGGGTGCAGGAAGCACGGA | + |
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Preference number: 4 (lower is better) Translates to: EAENGSRSCKCS*TLPGCGCRKHG Trigger: TCCGTGCTTCCTGCACCCACACCCTGGAAGTGTCAAGCTGCATTTACATGACCGGGAGCCATTCTCTGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS-3UTR TCA 90 bp | CTCCAGCCACTGCAGTCACAGTCAAGGCACCTGTCTCTGGATCTGGATCAATCCTTGCATATGCACAGCTaGGCATCTCTGGGAAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: LQPLQSQSRHLSLDLDQSLHMHS*ASLGRS Trigger: CGACCTTCCCAGAGATGCTCAGCTGTGCATATGCAA...GGATTGATCCAGATCCAGAGACAGGTGCCTTGACTGTGACTGCAGTGGCTGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS-3UTR GCA 90 bp | GCTCCGGTTGGCTGGTTTGCCCTTTCTCATAGATGTTGCCTTGGTGAGCCAGCTCTCGTTCCTCCTCTGTaGCAAGGCTGTTCTGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: APVGWFALSHRCCLGEPALVPPL*QGCSEL Trigger: AAGCTCAGAACAGCCTTGGCACAGAGGAGGAACGAG...AGCTGGCTCACCAAGGCAACATCTATGAGAAAGGGCAAACCAGCCAACCGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS-3UTR GCA 90 bp | TGCCTTGGTGAGCCAGCTTTCTGGAACTACAGGAAGCAGAGAATGGCTCCCGGTAGTTTCCAGAAGGACTaGTTCCCTGGATCGGACTCT | + |
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Preference number: 4 (lower is better) Translates to: CLGEPAFWNYRKQRMAPGSFQKD*FPGSDS Trigger: AGAGTCCGATCCAGGGAAGCAGTCCTTCTGGAAACT...ACCGGGAGCCATTCTCTGCTTCCTGTAGTTCCAGAAAGCTGGCTCACCAAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179321.8 |
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| CDS-3UTR CCA 90 bp | GCTCCGGTTGGCTGGTTTGCCCTTTCTCATAGATGTTGCCTTGGTGAGCCAGCTATGACGATGCTGTTATaGCCGCACCAAAGCCTATGG | + |
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Preference number: 4 (lower is better) Translates to: APVGWFALSHRCCLGEPAMTMLL*PHQSLW Trigger: CCATAGGCTTTGGTGCGGCCATAACAGCATCGTCAT...AGCTGGCTCACCAAGGCAACATCTATGAGAAAGGGCAAACCAGCCAACCGGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS-3UTR TCA 90 bp | CTTACCTGGGCGGAGGCAGGTGTGGCCCTGCCTCGTGATGGAACACATTTCCCAAATTGTAACTCCTCCTaGGACAAACATTCCTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: LTWAEAGVALPRDGTHFPNCNSS*DKHSCY Trigger: ATAGCAGGAATGTTTGTCTCAGGAGGAGTTACAATT...TGGGAAATGTGTTCCATCACGAGGCAGGGCCACACCTGCCTCCGCCCAGGTAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR TCA 90 bp | GCTCCGGTTGGCTGGTTTGCCCTTTCTCATAGATGTTGCCTTGGTGAGCCAGCTCCATCTTGGGTAAGGTaGCAAGTTTCCAGAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: APVGWFALSHRCCLGEPAPSWVR*QVSRRT Trigger: AGTCCTTCTGGAAACTTGTCACCTTACCCAAGATGG...AGCTGGCTCACCAAGGCAACATCTATGAGAAAGGGCAAACCAGCCAACCGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR TCA 90 bp | ATCACAGGGCCCCCAATGGAGGAGCTAGAGAAAATACCCAAGGAGCTGAAGGGAGCCAGAGCTGACTTTTaGTGTGCAGAAGAGGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: ITGPPMEELEKIPKELKGARADF*CAEEEQ Trigger: CTGTTCCTCTTCTGCACATCAAAAGTCAGCTCTGGC...TCCCTTCAGCTCCTTGGGTATTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTTGGTGAGCCAGCTTTCTGGAACTACAGGAAGCAGAGAATGGCTCCCGGTGGCTCCCTTCTTTTCTaGCTCCTTAGGGAAAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: CLGEPAFWNYRKQRMAPGGSLLF*LLREKW Trigger: CCATTTTTCCCTAAGGAGGCAGAAAAGAAGGGAGCC...ACCGGGAGCCATTCTCTGCTTCCTGTAGTTCCAGAAAGCTGGCTCACCAAGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR CCA 90 bp | CTTACCTGGGCGGAGGCAGGTGTGGCCCTGCCTCGTGATGGAACACATTTCCCAAAAATGGTCCAAGGATaGAATAGGTCATCATGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTWAEAGVALPRDGTHFPKMVQG*NRSSCN Trigger: GTTGCATGATGACCTATTCCATCCTTGGACCATTTT...TGGGAAATGTGTTCCATCACGAGGCAGGGCCACACCTGCCTCCGCCCAGGTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR TCA 90 bp | AACTTCTCCATGACAAAGAGAGACAGGGTTGGGTCCAGGAAGCCGAAGCAGGAGCCATCTTGGGTAAGGTaGCAAGTTTCCAGAAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: NFSMTKRDRVGSRKPKQEPSWVR*QVSRRT Trigger: AGTCCTTCTGGAAACTTGTCACCTTACCCAAGATGG...CTCCTGCTTCGGCTTCCTGGACCCAACCCTGTCTCTCTTTGTCATGGAGAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127841.2 |
||
| CDS-3UTR TCA 90 bp | CTCCAGCCACTGCAGTCACAGTCAAGGCACCTGTCTCTGGATCTGGATCAATCCACAAGAAGCCAGAGCTaGCTTTTGATGTGCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQPLQSQSRHLSLDLDQSTRSQS*LLMCRR Trigger: TCTTCTGCACATCAAAAGTCAGCTCTGGCTTCTTGT...GGATTGATCCAGATCCAGAGACAGGTGCCTTGACTGTGACTGCAGTGGCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR GCA 90 bp | CCAGTTGACAGACTGAACTTCTCCATGACAAAGAGAGACAGGGTTGGGTCCAGGAGTTTCCAGAAGGACTaGTTCCCTGGATCGGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: PVDRLNFSMTKRDRVGSRSFQKD*FPGSDS Trigger: TGAGTCCGATCCAGGGAAGCAGTCCTTCTGGAAACT...CCTGGACCCAACCCTGTCTCTCTTTGTCATGGAGAAGTTCAGTCTGTCAACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127841.2 |
||
| 3UTR CAA 72 bp | CGGTTGGCTGGTTTGCCCTTTCTCATAGATGTTGCCTaGGTGAGCCAGCTTTCTGGAACTACAGGAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLAGLPFLIDVA*VSQLSGTTGSR Trigger: TCTGCTTCCTGTAGTTCCAGAAAGCTGGCTCACCAAGGCAACATCTATGAGAAAGGGCAAACCAGCCAACCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| 3UTR CAA 72 bp | GTCGGTCTTTTAGAAACACTGCTCCGGTTGGCTGGTTaGCCCTTTCTCATAGATGTTGCCTTGGTGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGLLETLLRLAG*PFLIDVALVSQ Trigger: CTGGCTCACCAAGGCAACATCTATGAGAAAGGGCAAACCAGCCAACCGGAGCAGTGTTTCTAAAAGACCGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| 3UTR CAA 72 bp | ACGGGCAAGGTCGGTCTTTTAGAAACACTGCTCCGGTaGGCTGGTTTGCCCTTTCTCATAGATGTTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TGKVGLLETLLR*AGLPFLIDVAL Trigger: CAAGGCAACATCTATGAGAAAGGGCAAACCAGCCAACCGGAGCAGTGTTTCTAAAAGACCGACCTTGCCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCGGTTGGCTGGTTTGCCCTTTCTCATAGATGTTGCCTTGGTGAGCCAGCTAAATCCATTTGCATATaGACAGCTGAGCATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: APVGWFALSHRCCLGEPAKSICI*TAEHLW Trigger: CCAGAGATGCTCAGCTGTGCATATGCAAATGGATTT...AGCTGGCTCACCAAGGCAACATCTATGAGAAAGGGCAAACCAGCCAACCGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR GCA 90 bp | TGCCTTGGTGAGCCAGCTTTCTGGAACTACAGGAAGCAGAGAATGGCTCCCGGTAAATCCATTTGCATATaGACAGCTGAGCATCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CLGEPAFWNYRKQRMAPGKSICI*TAEHLW Trigger: CCAGAGATGCTCAGCTGTGCATATGCAAATGGATTT...ACCGGGAGCCATTCTCTGCTTCCTGTAGTTCCAGAAAGCTGGCTCACCAAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCGGTTGGCTGGTTTGCCCTTTCTCATAGATGTTGCCTTGGTGAGCCAGCTTGTAGCCACATTGTTTaGGAAAGCCTTAGCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: APVGWFALSHRCCLGEPACSHIV*ESLSKD Trigger: ATCCTTGCTAAGGCTTTCCCAAACAATGTGGCTACA...AGCTGGCTCACCAAGGCAACATCTATGAGAAAGGGCAAACCAGCCAACCGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR CCA 90 bp | CTCCAGCCACTGCAGTCACAGTCAAGGCACCTGTCTCTGGATCTGGATCAATCCAAAATGGTCCAAGGATaGAATAGGTCATCATGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQPLQSQSRHLSLDLDQSKMVQG*NRSSCN Trigger: GTTGCATGATGACCTATTCCATCCTTGGACCATTTT...GGATTGATCCAGATCCAGAGACAGGTGCCTTGACTGTGACTGCAGTGGCTGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR TCA 90 bp | GAGCCAGCTTTCTGGAACTACAGGAAGCAGAGAATGGCTCCCGGTCATGTAAATACAAGAAGCCAGAGCTaGCTTTTGATGTGCAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EPAFWNYRKQRMAPGHVNTRSQS*LLMCRR Trigger: TCTTCTGCACATCAAAAGTCAGCTCTGGCTTCTTGT...ATTTACATGACCGGGAGCCATTCTCTGCTTCCTGTAGTTCCAGAAAGCTGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR CCA 90 bp | CAACACACTTTTGTATCAGCATTCCGAGGCAGAGGCAGACAGATCTCTGTGAGCAGATCATTCCAATCATaGTGTTGCTGGCTCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QHTFVSAFRGRGRQISVSRSFQS*CCWLPS Trigger: AGAAGGGAGCCAGCAACACCATGATTGGAATGATCT...GCTCACAGAGATCTGTCTGCCTCTGCCTCGGAATGCTGATACAAAAGTGTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134170.8 |
||
| CDS-3UTR CCA 90 bp | CAGACTGAACTTCTCCATGACAAAGAGAGACAGGGTTGGGTCCAGGAAGCCGAATGTAGCCACATTGTTTaGGAAAGCCTTAGCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QTELLHDKERQGWVQEAECSHIV*ESLSKD Trigger: ATCCTTGCTAAGGCTTTCCCAAACAATGTGGCTACA...TTCGGCTTCCTGGACCCAACCCTGTCTCTCTTTGTCATGGAGAAGTTCAGTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127841.2 |
||
| CDS-3UTR TCA 90 bp | GAAAATACCCAAGGAGCTGAAGGGATCTGCAACCCTATAGGTGGAACAAAATTATTGCATATGCACAGCTaGGCATCTCTGGGAAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: ENTQGAEGICNPIGGTKLLHMHS*ASLGRS Trigger: CGACCTTCCCAGAGATGCTCAGCTGTGCATATGCAA...TAATTTTGTTCCACCTATAGGGTTGCAGATCCCTTCAGCTCCTTGGGTATTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR TCA 90 bp | AAACATATAAGTGGATGCTCACAGTCAACTATTGGATGGATCACAGGGCCCCCACATGAAAGCTCCAACTaGCCACATGGCACCAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: KHISGCSQSTIGWITGPPHESSN*PHGTKK Trigger: CTTTTTGGTGCCATGTGGTCAGTTGGAGCTTTCATG...TGGGGGCCCTGTGATCCATCCAATAGTTGACTGTGAGCATCCACTTATATGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTATCAGCATTCCGAGGCAGAGGCAGACAGATCTCTGTGAGCTCCAAGCCAAAATGGTCCAAGGATaGAATAGGTCATCATGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: FCISIPRQRQTDLCELQAKMVQG*NRSSCN Trigger: GTTGCATGATGACCTATTCCATCCTTGGACCATTTT...GGCTTGGAGCTCACAGAGATCTGTCTGCCTCTGCCTCGGAATGCTGATACAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134170.8 |
||
| CDS-3UTR CCA 90 bp | TTGACGAGTACAAACTTCAGTGTAGAGGAAGGCCATCTTTCAAAACCGGTTTCAGAAGGACTGCTTCCCTaGATCGGACTCTTGGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: LTSTNFSVEEGHLSKPVSEGLLP*IGLLGI Trigger: TATGCCCAAGAGTCCGATCCAGGGAAGCAGTCCTTC...TGAAACCGGTTTTGAAAGATGGCCTTCCTCTACACTGAAGTTTGTACTCGTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179321.8 |
||
| CDS-3UTR TCA 90 bp | CCGGAAGTTGATCCAACACACTTTTGTATCAGCATTCCGAGGCAGAGGCAGACAAATTGTAACTCCTCCTaGGACAAACATTCCTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: PEVDPTHFCISIPRQRQTNCNSS*DKHSCY Trigger: ATAGCAGGAATGTTTGTCTCAGGAGGAGTTACAATT...TGTCTGCCTCTGCCTCGGAATGCTGATACAAAAGTGTGTTGGATCAACTTCCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134170.8 |
||
| CDS-3UTR GCA 90 bp | GTCTACTATTCTCACCAGAAAACACATGGCAATGAATATCGGTCCTTCCGGAAGGGCTCCCTTCTTTTCTaGCTCCTTAGGGAAAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: VYYSHQKTHGNEYRSFRKGSLLF*LLREKW Trigger: CCATTTTTCCCTAAGGAGGCAGAAAAGAAGGGAGCC...CTTCCGGAAGGACCGATATTCATTGCCATGTGTTTTCTGGTGAGAATAGTAGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000134170.8 |
||
| CDS-3UTR GCA 90 bp | GAAAATACCCAAGGAGCTGAAGGGATCTGCAACCCTATAGGTGGAACAAAATTAAGTTTCCAGAAGGACTaGTTCCCTGGATCGGACTCA | + |
|
Preference number: 4 (lower is better) Translates to: ENTQGAEGICNPIGGTKLSFQKD*FPGSDS Trigger: TGAGTCCGATCCAGGGAAGCAGTCCTTCTGGAAACT...TAATTTTGTTCCACCTATAGGGTTGCAGATCCCTTCAGCTCCTTGGGTATTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000119597.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCAGCTTTCTGGAACTACAGGAAGCAGAGAATGGCTCCCGGTCATGTAAATGTCTTCAAATCCATTTaGATATGCACAGCTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EPAFWNYRKQRMAPGHVNVFKSI*ICTAEH Trigger: ATGCTCAGCTGTGCATATGCAAATGGATTTGAAGAC...ATTTACATGACCGGGAGCCATTCTCTGCTTCCTGTAGTTCCAGAAAGCTGGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR CCA 90 bp | TTAGAAAAACTGAAAGCCAAGAAATGCTCTGGACTGGGGCCTAGCAAACATATAAAAGAGAGACAGGGTTaGGTCCAGGAAGCCGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LEKLKAKKCSGLGPSKHIKERQG*VQEAEA Trigger: TGCTTCGGCTTCCTGGACCCAACCCTGTCTCTCTTT...TATATGTTTGCTAGGCCCCAGTCCAGAGCATTTCTTGGCTTTCAGTTTTTCTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR TCA 90 bp | GAAAATACCCAAGGAGCTGAAGGGATCTGCAACCCTATAGGTGGAACAAAATTACATGAAAGCTCCAACTaGCCACATGGCACCAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ENTQGAEGICNPIGGTKLHESSN*PHGTKK Trigger: CTTTTTGGTGCCATGTGGTCAGTTGGAGCTTTCATG...TAATTTTGTTCCACCTATAGGGTTGCAGATCCCTTCAGCTCCTTGGGTATTTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR GCA 90 bp | GTCTACTATTCTCACCAGAAAACACATGGCAATGAATATCGGTCCTTCCGGAAGTTCCAATCATGGTGTTaGTGGCTCCCTTCTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VYYSHQKTHGNEYRSFRKFQSWC*WLPSFL Trigger: CAGAAAAGAAGGGAGCCAGCAACACCATGATTGGAA...CTTCCGGAAGGACCGATATTCATTGCCATGTGTTTTCTGGTGAGAATAGTAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134170.8 |
||
| CDS-3UTR GCA 90 bp | TATATGGTAGGCAGGAATTTTGCCTTTTTGACGAGTACAAACTTCAGTGTAGAGCTCGTTCCTCCTCTGTaGCAAGGCTGTTCTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: YMVGRNFAFLTSTNFSVELVPPL*QGCSEL Trigger: AAGCTCAGAACAGCCTTGGCACAGAGGAGGAACGAG...CTCTACACTGAAGTTTGTACTCGTCAAAAAGGCAAAATTCCTGCCTACCATATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR CCA 90 bp | TTAGAAAAACTGAAAGCCAAGAAATGCTCTGGACTGGGGCCTAGCAAACATATAATGACGATGCTGTTATaGCCGCACCAAAGCCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: LEKLKAKKCSGLGPSKHIMTMLL*PHQSLW Trigger: CCATAGGCTTTGGTGCGGCCATAACAGCATCGTCAT...TATATGTTTGCTAGGCCCCAGTCCAGAGCATTTCTTGGCTTTCAGTTTTTCTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR CCA 90 bp | AAACATATAAGTGGATGCTCACAGTCAACTATTGGATGGATCACAGGGCCCCCATGTAGCCACATTGTTTaGGAAAGCCTTAGCAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KHISGCSQSTIGWITGPPCSHIV*ESLSKD Trigger: ATCCTTGCTAAGGCTTTCCCAAACAATGTGGCTACA...TGGGGGCCCTGTGATCCATCCAATAGTTGACTGTGAGCATCCACTTATATGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR TCA 90 bp | AAACATATAAGTGGATGCTCACAGTCAACTATTGGATGGATCACAGGGCCCCCAAATTGTAACTCCTCCTaGGACAAACATTCCTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: KHISGCSQSTIGWITGPPNCNSS*DKHSCY Trigger: ATAGCAGGAATGTTTGTCTCAGGAGGAGTTACAATT...TGGGGGCCCTGTGATCCATCCAATAGTTGACTGTGAGCATCCACTTATATGTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR CCA 90 bp | TTAGAAAAACTGAAAGCCAAGAAATGCTCTGGACTGGGGCCTAGCAAACATATAAGATCATTCCAATCATaGTGTTGCTGGCTCCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LEKLKAKKCSGLGPSKHIRSFQS*CCWLPS Trigger: AGAAGGGAGCCAGCAACACCATGATTGGAATGATCT...TATATGTTTGCTAGGCCCCAGTCCAGAGCATTTCTTGGCTTTCAGTTTTTCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR GCA 90 bp | TATATGGTAGGCAGGAATTTTGCCTTTTTGACGAGTACAAACTTCAGTGTAGAGTTCCAATCATGGTGTTaGTGGCTCCCTTCTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: YMVGRNFAFLTSTNFSVEFQSWC*WLPSFL Trigger: CAGAAAAGAAGGGAGCCAGCAACACCATGATTGGAA...CTCTACACTGAAGTTTGTACTCGTCAAAAAGGCAAAATTCCTGCCTACCATATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR GCA 90 bp | TTAGAAAAACTGAAAGCCAAGAAATGCTCTGGACTGGGGCCTAGCAAACATATAGTCTTCAAATCCATTTaGATATGCACAGCTGAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: LEKLKAKKCSGLGPSKHIVFKSI*ICTAEH Trigger: ATGCTCAGCTGTGCATATGCAAATGGATTTGAAGAC...TATATGTTTGCTAGGCCCCAGTCCAGAGCATTTCTTGGCTTTCAGTTTTTCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR CAA 90 bp | CACGACTCGCTTACCTGGGCGGAGGCAGGTGTGGCCCTGCCTCGTGATGGAACAGCTAGGAGGCCCATCTaGGGTAAGGTGACAAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HDSLTWAEAGVALPRDGTARRPI*GKVTSF Trigger: GAAACTTGTCACCTTACCCAAGATGGGCCTCCTAGC...TGTTCCATCACGAGGCAGGGCCACACCTGCCTCCGCCCAGGTAAGCGAGTCGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR CAA 90 bp | AGCACGGATCACAGGAAGCTCCTCCAGCCACTGCAGTCACAGTCAAGGCACCTGCAAAGAGAGACAGGGTaGGGTCCAGGAAGCCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: STDHRKLLQPLQSQSRHLQRETG*GPGSRS Trigger: GCTTCGGCTTCCTGGACCCAACCCTGTCTCTCTTTG...CAGGTGCCTTGACTGTGACTGCAGTGGCTGGAGGAGCTTCCTGTGATCCGTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR CAA 90 bp | CTTACCTGGGCGGAGGCAGGTGTGGCCCTGCCTCGTGATGGAACACATTTCCCAGCTAGGAGGCCCATCTaGGGTAAGGTGACAAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LTWAEAGVALPRDGTHFPARRPI*GKVTSF Trigger: GAAACTTGTCACCTTACCCAAGATGGGCCTCCTAGC...TGGGAAATGTGTTCCATCACGAGGCAGGGCCACACCTGCCTCCGCCCAGGTAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR CAA 90 bp | CACGACTCGCTTACCTGGGCGGAGGCAGGTGTGGCCCTGCCTCGTGATGGAACAATTCCAATCATGGTGTaGCTGGCTCCCTTCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HDSLTWAEAGVALPRDGTIPIMV*LAPFFS Trigger: AGAAAAGAAGGGAGCCAGCAACACCATGATTGGAAT...TGTTCCATCACGAGGCAGGGCCACACCTGCCTCCGCCCAGGTAAGCGAGTCGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR CAA 90 bp | GCTCCGGTTGGCTGGTTTGCCCTTTCTCATAGATGTTGCCTTGGTGAGCCAGCTGCCGGGATGTCTCTCTaGTACTTCCTCCAGGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: APVGWFALSHRCCLGEPAAGMSL*YFLQGH Trigger: ATGACCCTGGAGGAAGTACAAGAGAGACATCCCGGC...AGCTGGCTCACCAAGGCAACATCTATGAGAAAGGGCAAACCAGCCAACCGGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR CAA 90 bp | CTTACCTGGGCGGAGGCAGGTGTGGCCCTGCCTCGTGATGGAACACATTTCCCAATGACTGTAGCCACATaGTTTGGGAAAGCCTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LTWAEAGVALPRDGTHFPMTVAT*FGKALA Trigger: TGCTAAGGCTTTCCCAAACAATGTGGCTACAGTCAT...TGGGAAATGTGTTCCATCACGAGGCAGGGCCACACCTGCCTCCGCCCAGGTAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGTATCAGCATTCCGAGGCAGAGGCAGACAGATCTCTGTGAGCTCCAAGCCGCCGGGATGTCTCTCTaGTACTTCCTCCAGGGTCAT | + |
|
Preference number: 5 (lower is better) Translates to: FCISIPRQRQTDLCELQAAGMSL*YFLQGH Trigger: ATGACCCTGGAGGAAGTACAAGAGAGACATCCCGGC...GGCTTGGAGCTCACAGAGATCTGTCTGCCTCTGCCTCGGAATGCTGATACAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134170.8 |
||
| CDS TCA 90 bp | CTCACACAGAAATCCGCCCAGGATAGGTCCCATGAAAGCTCCAACTaGCCACATGGCACCAAAAAGACCAGATACAAGTCCCAGCGTACT | + |
|
Preference number: 5 (lower is better) Translates to: LTQKSAQDRSHESSN*PHGTKKTRYKSQRT Trigger: AGTACGCTGGGACTTGTATCTGGTCTTTTTGGTGCCATGTGGTCAGTTGGAGCTTTCATGGGACCTATCCTGGGCGGATTTCTGTGTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
||
| CDS-3UTR CAA 90 bp | AAACATATAAGTGGATGCTCACAGTCAACTATTGGATGGATCACAGGGCCCCCACAAAGAGAGACAGGGTaGGGTCCAGGAAGCCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: KHISGCSQSTIGWITGPPQRETG*GPGSRS Trigger: GCTTCGGCTTCCTGGACCCAACCCTGTCTCTCTTTG...TGGGGGCCCTGTGATCCATCCAATAGTTGACTGTGAGCATCCACTTATATGTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS CCA 90 bp | TATGCTGTCTTCAAATCCATTTGCATATGCACAGCTGAGCATCTCTaGGAAGGTCGGGATGATGCTCATTCCAGCGGAGATGCCATTTAC | + |
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Preference number: 5 (lower is better) Translates to: YAVFKSICICTAEHL*EGRDDAHSSGDAIY Trigger: GTAAATGGCATCTCCGCTGGAATGAGCATCATCCCGACCTTCCCAGAGATGCTCAGCTGTGCATATGCAAATGGATTTGAAGACAGCATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS-3UTR CAA 90 bp | CAACACACTTTTGTATCAGCATTCCGAGGCAGAGGCAGACAGATCTCTGTGAGCATTCCAATCATGGTGTaGCTGGCTCCCTTCTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: QHTFVSAFRGRGRQISVSIPIMV*LAPFFS Trigger: AGAAAAGAAGGGAGCCAGCAACACCATGATTGGAAT...GCTCACAGAGATCTGTCTGCCTCTGCCTCGGAATGCTGATACAAAAGTGTGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134170.8 |
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| CDS-3UTR CAA 90 bp | GTTGACAGACTGAACTTCTCCATGACAAAGAGAGACAGGGTTGGGTCCAGGAAGATGACTGTAGCCACATaGTTTGGGAAAGCCTTAGCA | + |
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Preference number: 5 (lower is better) Translates to: VDRLNFSMTKRDRVGSRKMTVAT*FGKALA Trigger: TGCTAAGGCTTTCCCAAACAATGTGGCTACAGTCAT...CTTCCTGGACCCAACCCTGTCTCTCTTTGTCATGGAGAAGTTCAGTCTGTCAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127841.2 |
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| CDS-3UTR CAA 90 bp | GAGCCAGCTTTCTGGAACTACAGGAAGCAGAGAATGGCTCCCGGTCATGTAAATGGCAAAATGTATAGGTaGAGTGGTATCATCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: EPAFWNYRKQRMAPGHVNGKMYR*SGIISR Trigger: CCTGCTGATGATACCACTCAACCTATACATTTTGCC...ATTTACATGACCGGGAGCCATTCTCTGCTTCCTGTAGTTCCAGAAAGCTGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS-3UTR CAA 90 bp | AAACATATAAGTGGATGCTCACAGTCAACTATTGGATGGATCACAGGGCCCCCACAAAAATCTGTTCTCTaGACAGTCGCCGGGATGTCT | + |
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Preference number: 5 (lower is better) Translates to: KHISGCSQSTIGWITGPPQKSVL*TVAGMS Trigger: AGACATCCCGGCGACTGTCAAGAGAACAGATTTTTG...TGGGGGCCCTGTGATCCATCCAATAGTTGACTGTGAGCATCCACTTATATGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS GCA 90 bp | TCCGAAGATCATTCCAATCATGGTGTTGCTGGCTCCCTTCTTTTCTaGCTCCTTAGGGAAAAATGGTCCAAGGATGGAATAGGTCATCAT | + |
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Preference number: 5 (lower is better) Translates to: SEDHSNHGVAGSLLF*LLREKWSKDGIGHH Trigger: ATGATGACCTATTCCATCCTTGGACCATTTTTCCCTAAGGAGGCAGAAAAGAAGGGAGCCAGCAACACCATGATTGGAATGATCTTCGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000119597.8 ENSMUST00000133289.2 ENSMUST00000134170.8 ENSMUST00000179321.8 |
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| CDS-3UTR CAA 90 bp | TATATGGTAGGCAGGAATTTTGCCTTTTTGACGAGTACAAACTTCAGTGTAGAGGCCGGGATGTCTCTCTaGTACTTCCTCCAGGGTCAT | + |
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Preference number: 5 (lower is better) Translates to: YMVGRNFAFLTSTNFSVEAGMSL*YFLQGH Trigger: ATGACCCTGGAGGAAGTACAAGAGAGACATCCCGGC...CTCTACACTGAAGTTTGTACTCGTCAAAAAGGCAAAATTCCTGCCTACCATATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS-3UTR CAA 90 bp | TCTACTATTCTCACCAGAAAACACATGGCAATGAATATCGGTCCTTCCGGAAGTCAAAAATCTGTTCTCTaGACAGTCGCCGGGATGTCT | + |
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Preference number: 5 (lower is better) Translates to: STILTRKHMAMNIGPSGSQKSVL*TVAGMS Trigger: AGACATCCCGGCGACTGTCAAGAGAACAGATTTTTG...ACTTCCGGAAGGACCGATATTCATTGCCATGTGTTTTCTGGTGAGAATAGTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134170.8 |
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| CDS GCA 90 bp | AAAATGGTCCAAGGATGGAATAGGTCATCATGCAACCCAAGTTCATaGTTGCTGCTGATACCAGCACAAAAATCTGTTCTCTTGACAGTC | + |
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Preference number: 5 (lower is better) Translates to: KMVQGWNRSSCNPSS*LLLIPAQKSVLLTV Trigger: GACTGTCAAGAGAACAGATTTTTGTGCTGGTATCAGCAGCAAGCATGAACTTGGGTTGCATGATGACCTATTCCATCCTTGGACCATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000119597.8 ENSMUST00000133289.2 ENSMUST00000134170.8 ENSMUST00000179321.8 |
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| CDS-3UTR CAA 90 bp | TTGACGAGTACAAACTTCAGTGTAGAGGAAGGCCATCTTTCAAAACCGGTTTCAATTCCAATCATGGTGTaGCTGGCTCCCTTCTTTTCT | + |
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Preference number: 5 (lower is better) Translates to: LTSTNFSVEEGHLSKPVSIPIMV*LAPFFS Trigger: AGAAAAGAAGGGAGCCAGCAACACCATGATTGGAAT...TGAAACCGGTTTTGAAAGATGGCCTTCCTCTACACTGAAGTTTGTACTCGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS-3UTR CAA 90 bp | TTGACGAGTACAAACTTCAGTGTAGAGGAAGGCCATCTTTCAAAACCGGTTTCAGGCAAAATGTATAGGTaGAGTGGTATCATCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LTSTNFSVEEGHLSKPVSGKMYR*SGIISR Trigger: CCTGCTGATGATACCACTCAACCTATACATTTTGCC...TGAAACCGGTTTTGAAAGATGGCCTTCCTCTACACTGAAGTTTGTACTCGTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS-3UTR CAA 90 bp | TTAGAAAAACTGAAAGCCAAGAAATGCTCTGGACTGGGGCCTAGCAAACATATAATGACTGTAGCCACATaGTTTGGGAAAGCCTTAGCA | + |
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Preference number: 5 (lower is better) Translates to: LEKLKAKKCSGLGPSKHIMTVAT*FGKALA Trigger: TGCTAAGGCTTTCCCAAACAATGTGGCTACAGTCAT...TATATGTTTGCTAGGCCCCAGTCCAGAGCATTTCTTGGCTTTCAGTTTTTCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS TCA 90 bp | TTCCGGAAGTTGATCCAACACACCAAAGAGAATTGTAACTCCTCCTaGGACAAACATTCCTGCTATAAACATAAATTTGGCTCCAATGTG | + |
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Preference number: 5 (lower is better) Translates to: FRKLIQHTKENCNSS*DKHSCYKHKFGSNV Trigger: CACATTGGAGCCAAATTTATGTTTATAGCAGGAATGTTTGTCTCAGGAGGAGTTACAATTCTCTTTGGTGTGTTGGATCAACTTCCGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS CAA 90 bp | AAGCAGGAGCTGAGAGAGATGATCACGAAGGCTAGGAGGCCCATCTaGGGTAAGGTGACAAGTTTCCAGAAGGACTGCTTCCCTGGATCG | + |
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Preference number: 6 (lower is better) Translates to: KQELREMITKARRPI*GKVTSFQKDCFPGS Trigger: CGATCCAGGGAAGCAGTCCTTCTGGAAACTTGTCACCTTACCCAAGATGGGCCTCCTAGCCTTCGTGATCATCTCTCTCAGCTCCTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS CAA 72 bp | AAATCTGTTCTCTTGACAGTCGCCGGGATGTCTCTCTaGTACTTCCTCCAGGGTCATCACCTCCTCCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: KSVLLTVAGMSL*YFLQGHHLLLS Trigger: GGACAGGAGGAGGTGATGACCCTGGAGGAAGTACAAGAGAGACATCCCGGCGACTGTCAAGAGAACAGATTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000119597.8 ENSMUST00000134170.8 ENSMUST00000179321.8 |
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| CDS CAA 72 bp | GTCTCTCTTGTACTTCCTCCAGGGTCATCACCCTGCTaGAAGGTCTCAGAAACAACAACAGCAGCGGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: VSLVLPPGSSPC*KVSETTTAAAA Trigger: TGCTGCCGCTGCTGTTGTTGTTTCTGAGACCTTCAAGCAGGGTGATGACCCTGGAGGAAGTACAAGAGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133289.2 |
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| CDS TCA 72 bp | AGACAGACCCAGGAAGACCAGGCCCACGTATCCAGTTaGCAGACTGAACTTCTCCATGACAAAGAGAGACAG | + |
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Preference number: 6 (lower is better) Translates to: RQTQEDQAHVSS*QTELLHDKERQ Trigger: CTGTCTCTCTTTGTCATGGAGAAGTTCAGTCTGTCAACTGGATACGTGGGCCTGGTCTTCCTGGGTCTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS TCA 72 bp | TCTCTCTTGTACTTCCTCCAGGGTCATCACCCTGCTTaGAGGTCTCAGAAACAACAACAGCAGCGGCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: SLLYFLQGHHPA*RSQKQQQQRQQ Trigger: TTGCTGCCGCTGCTGTTGTTGTTTCTGAGACCTTCAAGCAGGGTGATGACCCTGGAGGAAGTACAAGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133289.2 |
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| CDS GCA 72 bp | GATGTCTCTCTTGTACTTCCTCCAGGGTCATCACCCTaGTTGAAGGTCTCAGAAACAACAACAGCAGCGGCA | + |
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Preference number: 6 (lower is better) Translates to: DVSLVLPPGSSP*LKVSETTTAAA Trigger: TGCCGCTGCTGTTGTTGTTTCTGAGACCTTCAAGCAGGGTGATGACCCTGGAGGAAGTACAAGAGAGACATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133289.2 |
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| CDS CAA 72 bp | CTGAGAGAGATGATCACGAAGGCTAGGAGGCCCATCTaGGGTAAGGTGACAAGTTTCCAGAAGGACTGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LREMITKARRPI*GKVTSFQKDCF Trigger: GAAGCAGTCCTTCTGGAAACTTGTCACCTTACCCAAGATGGGCCTCCTAGCCTTCGTGATCATCTCTCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS TCA 72 bp | AAATCCGCCCAGGATAGGTCCCATGAAAGCTCCAACTaGCCACATGGCACCAAAAAGACCAGATACAAGTCC | + |
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Preference number: 6 (lower is better) Translates to: KSAQDRSHESSN*PHGTKKTRYKS Trigger: GGACTTGTATCTGGTCTTTTTGGTGCCATGTGGTCAGTTGGAGCTTTCATGGGACCTATCCTGGGCGGATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS CAA 90 bp | CCAAGTTCATGCTTGCTGCTGATACCAGCACAAAAATCTGTTCTCTaGACAGTCGCCGGGATGTCTCTCTTGTACTTCCTCCAGGGTCAT | + |
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Preference number: 6 (lower is better) Translates to: PSSCLLLIPAQKSVL*TVAGMSLLYFLQGH Trigger: ATGACCCTGGAGGAAGTACAAGAGAGACATCCCGGCGACTGTCAAGAGAACAGATTTTTGTGCTGGTATCAGCAGCAAGCATGAACTTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000119597.8 ENSMUST00000133289.2 ENSMUST00000134170.8 ENSMUST00000179321.8 |
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| CDS GCA 72 bp | AAGTCCCAGCGTACTTATGCTGTCTTCAAATCCATTTaGATATGCACAGCTGAGCATCTCTGGGAAGGTCGG | + |
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Preference number: 6 (lower is better) Translates to: KSQRTYAVFKSI*ICTAEHLWEGR Trigger: CCGACCTTCCCAGAGATGCTCAGCTGTGCATATGCAAATGGATTTGAAGACAGCATAAGTACGCTGGGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS GCA 72 bp | GCCATCGAAACACCACTTAGCAGAGTCCATAAGCCTTaGATAGCTGCTGCCCACTCGAAACCAATTTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: AIETPLSRVHKP*IAAAHSKPIFS Trigger: TGAGAAAATTGGTTTCGAGTGGGCAGCAGCTATGCAAGGCTTATGGACTCTGCTAAGTGGTGTTTCGATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS CCA 72 bp | TGGATGACGATGCTGTTATGGCCGCACCAAAGCCTATaGCGTCTACTATTCTCACCAGAAAACACATGGCAA | + |
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Preference number: 6 (lower is better) Translates to: WMTMLLWPHQSL*RLLFSPENTWQ Trigger: TTGCCATGTGTTTTCTGGTGAGAATAGTAGACGCCATAGGCTTTGGTGCGGCCATAACAGCATCGTCATCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS CCA 72 bp | TTCAAATCCATTTGCATATGCACAGCTGAGCATCTCTaGGAAGGTCGGGATGATGCTCATTCCAGCGGAGAT | + |
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Preference number: 6 (lower is better) Translates to: FKSICICTAEHL*EGRDDAHSSGD Trigger: ATCTCCGCTGGAATGAGCATCATCCCGACCTTCCCAGAGATGCTCAGCTGTGCATATGCAAATGGATTTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS CAA 72 bp | TGCTTGCTGCTGATACCAGCACAAAAATCTGTTCTCTaGACAGTCGCCGGGATGTCTCTCTTGTACTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: CLLLIPAQKSVL*TVAGMSLLYFL Trigger: GAGGAAGTACAAGAGAGACATCCCGGCGACTGTCAAGAGAACAGATTTTTGTGCTGGTATCAGCAGCAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000119597.8 ENSMUST00000133289.2 ENSMUST00000134170.8 ENSMUST00000179321.8 |
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| CDS GCA 72 bp | CAGCGTACTTATGCTGTCTTCAAATCCATTTGCATATaGACAGCTGAGCATCTCTGGGAAGGTCGGGATGAT | + |
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Preference number: 6 (lower is better) Translates to: QRTYAVFKSICI*TAEHLWEGRDD Trigger: ATCATCCCGACCTTCCCAGAGATGCTCAGCTGTGCATATGCAAATGGATTTGAAGACAGCATAAGTACGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS TCA 72 bp | CCATTTACAACCAACACCAACACAAGAAGCCAGAGCTaGCTTTTGATGTGCAGAAGAGGAACAGGTCCTAAG | + |
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Preference number: 6 (lower is better) Translates to: PFTTNTNTRSQS*LLMCRRGTGPK Trigger: CTTAGGACCTGTTCCTCTTCTGCACATCAAAAGTCAGCTCTGGCTTCTTGTGTTGGTGTTGGTTGTAAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS GCA 72 bp | CATTCCAATCATGGTGTTGCTGGCTCCCTTCTTTTCTaGCTCCTTAGGGAAAAATGGTCCAAGGATGGAATA | + |
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Preference number: 6 (lower is better) Translates to: HSNHGVAGSLLF*LLREKWSKDGI Trigger: TATTCCATCCTTGGACCATTTTTCCCTAAGGAGGCAGAAAAGAAGGGAGCCAGCAACACCATGATTGGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000119597.8 ENSMUST00000133289.2 ENSMUST00000134170.8 ENSMUST00000179321.8 |
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| CDS GCA 72 bp | CAAGGATGGAATAGGTCATCATGCAACCCAAGTTCATaGTTGCTGCTGATACCAGCACAAAAATCTGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: QGWNRSSCNPSS*LLLIPAQKSVL Trigger: GAGAACAGATTTTTGTGCTGGTATCAGCAGCAAGCATGAACTTGGGTTGCATGATGACCTATTCCATCCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000119597.8 ENSMUST00000133289.2 ENSMUST00000134170.8 ENSMUST00000179321.8 |
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| CDS TCA 72 bp | AAACACATGGCAATGAATATCGGTCCTTCCGGAAGTTaGTCCAACACACCAAAGAGAATTGTAACTCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: KHMAMNIGPSGS*SNTPKRIVTPP Trigger: AGGAGGAGTTACAATTCTCTTTGGTGTGTTGGATCAACTTCCGGAAGGACCGATATTCATTGCCATGTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS CAA 72 bp | AAAACACATGGCAATGAATATCGGTCCTTCCGGAAGTaGATCCAACACACCAAAGAGAATTGTAACTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: KTHGNEYRSFRK*IQHTKENCNSS Trigger: GGAGGAGTTACAATTCTCTTTGGTGTGTTGGATCAACTTCCGGAAGGACCGATATTCATTGCCATGTGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000119597.8 ENSMUST00000179321.8 |
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| CDS CAA 90 bp | ATTGTAACTCCTCCTGAGACAAACATTCCTGCTATAAACATAAATTaGGCTCCAATGTGTACAAGGTATTTTCCAAACACCAAAGATGCC | + |
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Preference number: 6 (lower is better) Translates to: IVTPPETNIPAININ*APMCTRYFPNTKDA Trigger: GGCATCTTTGGTGTTTGGAAAATACCTTGTACACATTGGAGCCAAATTTATGTTTATAGCAGGAATGTTTGTCTCAGGAGGAGTTACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000119597.8 ENSMUST00000133289.2 ENSMUST00000134170.8 ENSMUST00000179321.8 |
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