Pregenerated sensors for SLC18A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025094Ensembl transcript IDs: ENSMUST00000026084.5
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAGCAATGGATGGCGTGACTAAGACAGCTCTTAAGTCATCTCACTaGAGACACATGTACACAGTTAAACATTGGGCAACGTTAGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: PAMDGVTKTALKSSH*RHMYTVKHWATLEG Trigger: CCCCTCTAACGTTGCCCAATGTTTAACTGTGTACATGTGTCTCCAGTGAGATGACTTAAGAGCTGTCTTAGTCACGCCATCCATTGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR CCA 90 bp | CTCAAAAGCAGAAATGACAGGAATCAGTTATTGTATATGGTATTGTaGGTAAGGACAACTACAAGGCCTCTCTCACATCACATCACAAGG | + |
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Preference number: 1 (lower is better) Translates to: LKSRNDRNQLLYMVL*VRTTTRPLSHHITR Trigger: CCTTGTGATGTGATGTGAGAGAGGCCTTGTAGTTGTCCTTACCCACAATACCATATACAATAACTGATTCCTGTCATTTCTGCTTTTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR-3UTR TCA 90 bp | CAAGGCATCCTGGAGAAGGTTAAGCCCTGCCCTTTTAGCCATGTAAGAGCAGCCCCACCTCTTTCCAGGTaGGTGGTTATAACAGAAAAC | + |
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Preference number: 2 (lower is better) Translates to: QGILEKVKPCPFSHVRAAPPLSR*VVITEN Trigger: GTTTTCTGTTATAACCACTCACCTGGAAAGAGGTGG...GGCTGCTCTTACATGGCTAAAAGGGCAGGGCTTAACCTTCTCCAGGATGCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCACATCACATCACAAGGCATCCTGGAGAAGGTTAAGCCCTGCCCTTTTAGCAACACTTGGATGACCTaGAAGCAGGTGAGAGATGTG | + |
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Preference number: 2 (lower is better) Translates to: SHITSQGILEKVKPCPFSNTWMT*KQVRDV Trigger: CACATCTCTCACCTGCTTGCAGGTCATCCAAGTGTT...GCTAAAAGGGCAGGGCTTAACCTTCTCCAGGATGCCTTGTGATGTGATGTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR-3UTR TCA 90 bp | TCTCACATCACATCACAAGGCATCCTGGAGAAGGTTAAGCCCTGCCCTTTTAGCGCCAGCAAAGGTTTATaGATAAGTCTGAAAGATGGC | + |
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Preference number: 2 (lower is better) Translates to: SHITSQGILEKVKPCPFSASKGL*ISLKDG Trigger: GCCATCTTTCAGACTTATTCATAAACCTTTGCTGGC...GCTAAAAGGGCAGGGCTTAACCTTCTCCAGGATGCCTTGTGATGTGATGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR-3UTR CCA 90 bp | ATCACATCACAAGGCATCCTGGAGAAGGTTAAGCCCTGCCCTTTTAGCCATGTACTTAAGTCATCTCACTaGAGACACATGTACACAGTT | + |
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Preference number: 2 (lower is better) Translates to: ITSQGILEKVKPCPFSHVLKSSH*RHMYTV Trigger: AACTGTGTACATGTGTCTCCAGTGAGATGACTTAAG...TACATGGCTAAAAGGGCAGGGCTTAACCTTCTCCAGGATGCCTTGTGATGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR-3UTR TCA 90 bp | TTCTATACTGTGTTTGCATTCCGGAAGATTGTAGTCTCATACAAAGCAATTGTACAGCAATGGATGGCGTaGCTAAGACAGCTCTTAAGT | + |
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Preference number: 2 (lower is better) Translates to: FYTVFAFRKIVVSYKAIVQQWMA*LRQLLS Trigger: ACTTAAGAGCTGTCTTAGTCACGCCATCCATTGCTG...TACAATTGCTTTGTATGAGACTACAATCTTCCGGAATGCAAACACAGTATAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR-3UTR TCA 90 bp | GCAGTCAAAAGGAAGTTGAGTATTCATTACTACCTCACTAAGATTTTTGTGTCTCTGCTGCCAATGATATaGCACAGAAAACCATTTACA | + |
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Preference number: 2 (lower is better) Translates to: AVKRKLSIHYYLTKIFVSLLPMI*HRKPFT Trigger: TGTAAATGGTTTTCTGTGTCATATCATTGGCAGCAG...AGACACAAAAATCTTAGTGAGGTAGTAATGAATACTCAACTTCCTTTTGACTGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR CAA 90 bp | ACTAAAGTGCAACCAGCACAGATACAGTTAGCAGTCAAAAGGAAGTaGAGTATTCATTACTACCTCACTAAGATTTTTGTGTCTGAATTA | + |
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Preference number: 2 (lower is better) Translates to: TKVQPAQIQLAVKRK*SIHYYLTKIFVSEL Trigger: TAATTCAGACACAAAAATCTTAGTGAGGTAGTAATGAATACTCAACTTCCTTTTGACTGCTAACTGTATCTGTGCTGGTTGCACTTTAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR-3UTR TCA 90 bp | TTCTATACTGTGTTTGCATTCCGGAAGATTGTAGTCTCATACAAAGCAATTGTAAATTACTGCTGCCAATaGTATGACACAGAAAACCAT | + |
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Preference number: 2 (lower is better) Translates to: FYTVFAFRKIVVSYKAIVNYCCQ*YDTENH Trigger: ATGGTTTTCTGTGTCATATCATTGGCAGCAGTAATT...TACAATTGCTTTGTATGAGACTACAATCTTCCGGAATGCAAACACAGTATAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR CCA 72 bp | GATGGCGTGACTAAGACAGCTCTTAAGTCATCTCACTaGAGACACATGTACACAGTTAAACATTGGGCAACG | + |
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Preference number: 3 (lower is better) Translates to: DGVTKTALKSSH*RHMYTVKHWAT Trigger: CGTTGCCCAATGTTTAACTGTGTACATGTGTCTCCAGTGAGATGACTTAAGAGCTGTCTTAGTCACGCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR-3UTR CAA 90 bp | ATCACATCACAAGGCATCCTGGAGAAGGTTAAGCCCTGCCCTTTTAGCCATGTATTCTTTATAAGGCTGTaGGCAGTCGATCATAACCAT | + |
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Preference number: 3 (lower is better) Translates to: ITSQGILEKVKPCPFSHVFFIRL*AVDHNH Trigger: ATGGTTATGATCGACTGCCAACAGCCTTATAAAGAA...TACATGGCTAAAAGGGCAGGGCTTAACCTTCTCCAGGATGCCTTGTGATGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR TCA 72 bp | TTTGGTTGTTTTACTCTATGCCAGCAATGGATGGCGTaGCTAAGACAGCTCTTAAGTCATCTCACTGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: FGCFTLCQQWMA*LRQLLSHLTGD Trigger: GTCTCCAGTGAGATGACTTAAGAGCTGTCTTAGTCACGCCATCCATTGCTGGCATAGAGTAAAACAACCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR-3UTR CAA 90 bp | ATAAATCTTCAGAGAGCTGTAAGTTCTTTGTTCTGGTACATGCACAGTCTCTTTAGAGTGGGAACCCAATaGTCCCTTAAACACACCAGA | + |
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Preference number: 3 (lower is better) Translates to: INLQRAVSSLFWYMHSLFRVGTQ*SLKHTR Trigger: TCTGGTGTGTTTAAGGGACAATTGGGTTCCCACTCT...AAAGAGACTGTGCATGTACCAGAACAAAGAACTTACAGCTCTCTGAAGATTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR-3UTR CAA 90 bp | AGTGTTGGTATACAATGCATTGTCTTACACGATTCTGTTTCTCAGACTGCTAGTAAGTATCACCTTTGGTaGTTTTACTCTATGCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: SVGIQCIVLHDSVSQTASKYHLW*FYSMPA Trigger: TGCTGGCATAGAGTAAAACAACCAAAGGTGATACTT...ACTAGCAGTCTGAGAAACAGAATCGTGTAAGACAATGCATTGTATACCAACACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR-3UTR CAA 90 bp | TTCTATACTGTGTTTGCATTCCGGAAGATTGTAGTCTCATACAAAGCAATTGTAACAACACATTCAGTGTaGGTATACAATGCATTGTCT | + |
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Preference number: 3 (lower is better) Translates to: FYTVFAFRKIVVSYKAIVTTHSV*VYNALS Trigger: AGACAATGCATTGTATACCAACACTGAATGTGTTGT...TACAATTGCTTTGTATGAGACTACAATCTTCCGGAATGCAAACACAGTATAGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR TCA 72 bp | CAGCTTGATGATAGCCTTGTTTACTGTTCCAGAACATaGACTGGATTGATAAACCTTAACATATTCAACCTT | + |
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Preference number: 3 (lower is better) Translates to: QLDDSLVYCSRT*TGLINLNIFNL Trigger: AAGGTTGAATATGTTAAGGTTTATCAATCCAGTTCATGTTCTGGAACAGTAAACAAGGCTATCATCAAGCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR GCA 72 bp | GACAGATACTATTTGAGACAAATTCTATACTGTGTTTaGATTCCGGAAGATTGTAGTCTCATACAAAGCAAT | + |
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Preference number: 3 (lower is better) Translates to: DRYYLRQILYCV*IPEDCSLIQSN Trigger: ATTGCTTTGTATGAGACTACAATCTTCCGGAATGCAAACACAGTATAGAATTTGTCTCAAATAGTATCTGTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CCA 90 bp | CAAGGCATCCTGGAGAAGGTTAAGCCCTGCCCTTTTAGCCATGTAAGAGCAGCCCATCTGTGTACACGCTaGCCAGCATGCCCATCCCAG | + |
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Preference number: 4 (lower is better) Translates to: QGILEKVKPCPFSHVRAAHLCTR*PACPSQ Trigger: CTGGGATGGGCATGCTGGCCAGCGTGTACACAGATG...GGCTGCTCTTACATGGCTAAAAGGGCAGGGCTTAACCTTCTCCAGGATGCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR TCA 90 bp | TATCACCTTTGGTTGTTTTACTCTATGCCAGCAATGGATGGCGTGACTAAGACACGGAAGTGGAGGCTGTaGGCGCTGGCCTGGCAGTCT | + |
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Preference number: 4 (lower is better) Translates to: YHLWLFYSMPAMDGVTKTRKWRL*ALAWQS Trigger: AGACTGCCAGGCCAGCGCTCACAGCCTCCACTTCCG...TGTCTTAGTCACGCCATCCATTGCTGGCATAGAGTAAAACAACCAAAGGTGATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR TCA 90 bp | ATCACATCACAAGGCATCCTGGAGAAGGTTAAGCCCTGCCCTTTTAGCCATGTACATCCCAGCCACAGATaGGCAAGAGGAGCCGATTCC | + |
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Preference number: 4 (lower is better) Translates to: ITSQGILEKVKPCPFSHVHPSHR*ARGADS Trigger: GGAATCGGCTCCTCTTGCTCATCTGTGGCTGGGATG...TACATGGCTAAAAGGGCAGGGCTTAACCTTCTCCAGGATGCCTTGTGATGTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CCA 90 bp | GGCTTAAGAGTGGGAACCCAATTGTCCCTTAAACACACCAGACTTCACATCACCGGTCTTTGTCTTCACTaGGGCAGTCGGGAGGGACAG | + |
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Preference number: 4 (lower is better) Translates to: GLRVGTQLSLKHTRLHITGLCLH*GSREGQ Trigger: CTGTCCCTCCCGACTGCCCCAGTGAAGACAAAGACC...GGTGATGTGAAGTCTGGTGTGTTTAAGGGACAATTGGGTTCCCACTCTTAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR GCA 90 bp | ATCACATCACAAGGCATCCTGGAGAAGGTTAAGCCCTGCCCTTTTAGCCATGTAAAGGCAACGCCCAGCTaGCACTTTCGGGAACACATG | + |
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Preference number: 4 (lower is better) Translates to: ITSQGILEKVKPCPFSHVKATPS*HFREHM Trigger: CATGTGTTCCCGAAAGTGGCAGCTGGGCGTTGCCTT...TACATGGCTAAAAGGGCAGGGCTTAACCTTCTCCAGGATGCCTTGTGATGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CCA 90 bp | ATCACATCACAAGGCATCCTGGAGAAGGTTAAGCCCTGCCCTTTTAGCCATGTAGAGGGACAGTCGTGTTaGTCACAGTGTGCTGTGTGG | + |
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Preference number: 4 (lower is better) Translates to: ITSQGILEKVKPCPFSHVEGQSC*SQCAVW Trigger: CCACACAGCACACTGTGACCAACACGACTGTCCCTC...TACATGGCTAAAAGGGCAGGGCTTAACCTTCTCCAGGATGCCTTGTGATGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR TCA 90 bp | GCAATGGATGGCGTGACTAAGACAGCTCTTAAGTCATCTCACTGGAGACACATGTGGAGCCTGCAGCGATaGGAATGTATGGGTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: AMDGVTKTALKSSHWRHMWSLQR*ECMGPS Trigger: TGAAGGACCCATACATTCTCATCGCTGCAGGCTCCA...CATGTGTCTCCAGTGAGATGACTTAAGAGCTGTCTTAGTCACGCCATCCATTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CCA 90 bp | CAAGGCATCCTGGAGAAGGTTAAGCCCTGCCCTTTTAGCCATGTAAGAGCAGCCTTAATGGGGCAGTTGTaGTCCATGAGGATAGCCATT | + |
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Preference number: 4 (lower is better) Translates to: QGILEKVKPCPFSHVRAALMGQL*SMRIAI Trigger: AATGGCTATCCTCATGGACCACAACTGCCCCATTAA...GGCTGCTCTTACATGGCTAAAAGGGCAGGGCTTAACCTTCTCCAGGATGCCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR TCA 90 bp | TTCTATACTGTGTTTGCATTCCGGAAGATTGTAGTCTCATACAAAGCAATTGTAGGTGGTAGCCTTGGGTaGCTCCCCTCCTGGGAGGCC | + |
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Preference number: 4 (lower is better) Translates to: FYTVFAFRKIVVSYKAIVGGSLG*LPSWEA Trigger: GGCCTCCCAGGAGGGGAGTCACCCAAGGCTACCACC...TACAATTGCTTTGTATGAGACTACAATCTTCCGGAATGCAAACACAGTATAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR TCA 90 bp | AGTGTTGGTATACAATGCATTGTCTTACACGATTCTGTTTCTCAGACTGCTAGTGCGCGAGGAACACGATaGACAGGATCAGCTTGCGCG | + |
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Preference number: 4 (lower is better) Translates to: SVGIQCIVLHDSVSQTASARGTR*TGSACA Trigger: CGCGCAAGCTGATCCTGTTCATCGTGTTCCTCGCGC...ACTAGCAGTCTGAGAAACAGAATCGTGTAAGACAATGCATTGTATACCAACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CCA 90 bp | CAGGAATCAGTTATTGTATATGGTATTGTGGGTAAGGACAACTACAAGGCCTCTTGGCTGCACTCGGGATaGCTGGAGCACAAAGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: QESVIVYGIVGKDNYKASWLHSG*LEHKEL Trigger: CAGCTCTTTGTGCTCCAGCCATCCCGAGTGCAGCCA...AGAGGCCTTGTAGTTGTCCTTACCCACAATACCATATACAATAACTGATTCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CCA 90 bp | TATCACCTTTGGTTGTTTTACTCTATGCCAGCAATGGATGGCGTGACTAAGACAATAAGAGATGCTCGCTaGCAGGAAGGCAACGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: YHLWLFYSMPAMDGVTKTIRDAR*QEGNAQ Trigger: CTGGGCGTTGCCTTCCTGCCAGCGAGCATCTCTTAT...TGTCTTAGTCACGCCATCCATTGCTGGCATAGAGTAAAACAACCAAAGGTGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR GCA 90 bp | GCAGTCAAAAGGAAGTTGAGTATTCATTACTACCTCACTAAGATTTTTGTGTCTGAGGAGCCGATTCCCTaGAGGGACCTGGCGATCAGC | + |
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Preference number: 4 (lower is better) Translates to: AVKRKLSIHYYLTKIFVSEEPIP*RDLAIS Trigger: GCTGATCGCCAGGTCCCTGCAGGGAATCGGCTCCTC...AGACACAAAAATCTTAGTGAGGTAGTAATGAATACTCAACTTCCTTTTGACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CCA 90 bp | GCAATGGATGGCGTGACTAAGACAGCTCTTAAGTCATCTCACTGGAGACACATGAGTCCACCATCCCAATaGCAAAACCAACTCCAAAGT | + |
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Preference number: 4 (lower is better) Translates to: AMDGVTKTALKSSHWRHMSPPSQ*QNQLQS Trigger: ACTTTGGAGTTGGTTTTGCCATTGGGATGGTGGACT...CATGTGTCTCCAGTGAGATGACTTAAGAGCTGTCTTAGTCACGCCATCCATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR TCA 90 bp | ATAAATCTTCAGAGAGCTGTAAGTTCTTTGTTCTGGTACATGCACAGTCTCTTTAGAGGTGTCCCCTTCTaGCTTTCTGGCTGCACTCGG | + |
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Preference number: 4 (lower is better) Translates to: INLQRAVSSLFWYMHSLFRGVPF*LSGCTR Trigger: CCGAGTGCAGCCAGAAAGTCAGAAGGGGACACCTCT...AAAGAGACTGTGCATGTACCAGAACAAAGAACTTACAGCTCTCTGAAGATTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CCA 90 bp | GCAGTCAAAAGGAAGTTGAGTATTCATTACTACCTCACTAAGATTTTTGTGTCTGGAGGCTGTGAGCGCTaGCCTGGCAGTCTGGATTTC | + |
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Preference number: 4 (lower is better) Translates to: AVKRKLSIHYYLTKIFVSGGCER*PGSLDF Trigger: GAAATCCAGACTGCCAGGCCAGCGCTCACAGCCTCC...AGACACAAAAATCTTAGTGAGGTAGTAATGAATACTCAACTTCCTTTTGACTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR TCA 90 bp | ATCACATCACAAGGCATCCTGGAGAAGGTTAAGCCCTGCCCTTTTAGCCATGTAAAATATTGGTTCCAATaGGATAAGAGATGCTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: ITSQGILEKVKPCPFSHVKYWFQ*DKRCSL Trigger: CAGCGAGCATCTCTTATCTCATTGGAACCAATATTT...TACATGGCTAAAAGGGCAGGGCTTAACCTTCTCCAGGATGCCTTGTGATGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CCA 90 bp | TTCTATACTGTGTTTGCATTCCGGAAGATTGTAGTCTCATACAAAGCAATTGTAGGGTTGGTGAGGAGCTaGACAGTGGCTTTGGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: FYTVFAFRKIVVSYKAIVGLVRS*TVALEA Trigger: TGCCTCCAAAGCCACTGTCCAGCTCCTCACCAACCC...TACAATTGCTTTGTATGAGACTACAATCTTCCGGAATGCAAACACAGTATAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CCA 90 bp | ATCACATCACAAGGCATCCTGGAGAAGGTTAAGCCCTGCCCTTTTAGCCATGTAAGAATCCAGCAAACATaGGAATTGGATAGCCAATTC | + |
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Preference number: 4 (lower is better) Translates to: ITSQGILEKVKPCPFSHVRIQQT*ELDSQF Trigger: GAATTGGCTATCCAATTCCCATGTTTGCTGGATTCT...TACATGGCTAAAAGGGCAGGGCTTAACCTTCTCCAGGATGCCTTGTGATGTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CCA 90 bp | TTCTATACTGTGTTTGCATTCCGGAAGATTGTAGTCTCATACAAAGCAATTGTATTCCCTGCAGGGACCTaGCGATCAGCAGGAAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: FYTVFAFRKIVVSYKAIVFPAGT*RSAGRH Trigger: ATGCCTTCCTGCTGATCGCCAGGTCCCTGCAGGGAA...TACAATTGCTTTGTATGAGACTACAATCTTCCGGAATGCAAACACAGTATAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CCA 90 bp | GCAGTCAAAAGGAAGTTGAGTATTCATTACTACCTCACTAAGATTTTTGTGTCTGGGCGGGCTCCAGCATaGCTATCCCCATGTTTGCAA | + |
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Preference number: 4 (lower is better) Translates to: AVKRKLSIHYYLTKIFVSGRAPA*LSPCLQ Trigger: TTGCAAACATGGGGATAGCCATGCTGGAGCCCGCCC...AGACACAAAAATCTTAGTGAGGTAGTAATGAATACTCAACTTCCTTTTGACTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR TCA 90 bp | CTGAAAAGACATATCAGTGTTGTCATGCTTAGAAAAGTTATTCTACCCAGCACATGGAGCACAAAGAGCTaGATAGCTCCATCCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: LKRHISVVMLRKVILPSTWSTKS*IAPSKS Trigger: GCTCTTGGATGGAGCTATTCAGCTCTTTGTGCTCCA...TGTGCTGGGTAGAATAACTTTTCTAAGCATGACAACACTGATATGTCTTTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR GCA 90 bp | CTGAAAAGACATATCAGTGTTGTCATGCTTAGAAAAGTTATTCTACCCAGCACAGCAGAAGGCTACATCTaGAATGGCATACACACTCCC | + |
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Preference number: 4 (lower is better) Translates to: LKRHISVVMLRKVILPSTAEGYI*NGIHTP Trigger: GGGAGTGTGTATGCCATTGCAGATGTAGCCTTCTGC...TGTGCTGGGTAGAATAACTTTTCTAAGCATGACAACACTGATATGTCTTTTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR GCA 90 bp | AGGTGTCCTAACCACTCTATTATCTTTCTTAACATAATCGTGTTAGCCGTGAACCCAAGGAAAGCCAATTaGCTTTGCAATAGCACCACC | + |
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Preference number: 4 (lower is better) Translates to: RCPNHSIIFLNIIVLAVNPRKAN*LCNSTT Trigger: GGTGGTGCTATTGCAAAGGCAATTGGCTTTCCTTGG...GTTCACGGCTAACACGATTATGTTAAGAAAGATAATAGAGTGGTTAGGACACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CCA 90 bp | GAGTTCACTAACAGCATTAACTGGCACACTGAAAAGACATATCAGTGTTGTCATGCTGGCCTGGCAGTCTaGATTTCCGTAGTATTTTTC | + |
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Preference number: 4 (lower is better) Translates to: EFTNSINWHTEKTYQCCHAGLAV*ISVVFF Trigger: GAAAAATACTACGGAAATCCAGACTGCCAGGCCAGC...ATGACAACACTGATATGTCTTTTCAGTGTGCCAGTTAATGCTGTTAGTGAACTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR TCA 90 bp | TATCACCTTTGGTTGTTTTACTCTATGCCAGCAATGGATGGCGTGACTAAGACAGGCTGGACATTATTCTaGGTGTACATCTTTGTCTTA | + |
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Preference number: 4 (lower is better) Translates to: YHLWLFYSMPAMDGVTKTGWTLF*VYIFVL Trigger: TAAGACAAAGATGTACACTCAGAATAATGTCCAGCC...TGTCTTAGTCACGCCATCCATTGCTGGCATAGAGTAAAACAACCAAAGGTGATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CCA 90 bp | CTGAAAAGACATATCAGTGTTGTCATGCTTAGAAAAGTTATTCTACCCAGCACAAGCGATGAGAATGTATaGGTCCTTCAGCAAGGTCGT | + |
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Preference number: 4 (lower is better) Translates to: LKRHISVVMLRKVILPSTSDENV*VLQQGR Trigger: ACGACCTTGCTGAAGGACCCATACATTCTCATCGCT...TGTGCTGGGTAGAATAACTTTTCTAAGCATGACAACACTGATATGTCTTTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR CAA 72 bp | CAGTCGATCATAACCATGAAAAAGAAAGTATCACCTTaGGTTGTTTTACTCTATGCCAGCAATGGATGGCGT | + |
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Preference number: 4 (lower is better) Translates to: QSIITMKKKVSP*VVLLYASNGWR Trigger: ACGCCATCCATTGCTGGCATAGAGTAAAACAACCAAAGGTGATACTTTCTTTTTCATGGTTATGATCGACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR CAA 72 bp | AGCAGAAATGACAGGAATCAGTTATTGTATATGGTATaGTGGGTAAGGACAACTACAAGGCCTCTCTCACAT | + |
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Preference number: 4 (lower is better) Translates to: SRNDRNQLLYMV*WVRTTTRPLSH Trigger: ATGTGAGAGAGGCCTTGTAGTTGTCCTTACCCACAATACCATATACAATAACTGATTCCTGTCATTTCTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR GCA 90 bp | AGGTGTCCTAACCACTCTATTATCTTTCTTAACATAATCGTGTTAGCCGTGAACTATAGTAAGAGAAGATaGTGTGGAAGCTTTCGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RCPNHSIIFLNIIVLAVNYSKRR*CGSFRK Trigger: CTTCCGAAAGCTTCCACAGCATCTTCTCTTACTATA...GTTCACGGCTAACACGATTATGTTAAGAAAGATAATAGAGTGGTTAGGACACCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| 3UTR CAA 72 bp | CTTTCCTCTGCTTTCAGAACATTCACTTTTTACCCCTaGTTGGCTTTAATTACTGCTGCCAATGATATGACA | + |
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Preference number: 4 (lower is better) Translates to: LSSAFRTFTFYP*LALITAANDMT Trigger: TGTCATATCATTGGCAGCAGTAATTAAAGCCAACAAGGGGTAAAAAGTGAATGTTCTGAAAGCAGAGGAAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CCA 90 bp | AGCAGCAGCGCGAGGAACACGATGAACAGGATCAGCTTGCGCGAGTaGCGGCTGTCCCGCAGCCATCGCAGCAGCACCAGATCGCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: SSSARNTMNRISLRE*RLSRSHRSSTRSLR Trigger: CCTGAGCGATCTGGTGCTGCTGCGATGGCTGCGGGACAGCCGCCACTCGCGCAAGCTGATCCTGTTCATCGTGTTCCTCGCGCTGCTGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CCA 90 bp | CAATCCCCATGGCGTTACCCCTCTCTTCATCATCTGTGTACACGCTaGCCAGCATGCCCATCCCAGCCACAGATGAGCAAGAGGAGCCGA | + |
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Preference number: 5 (lower is better) Translates to: QSPWRYPSLHHLCTR*PACPSQPQMSKRSR Trigger: TCGGCTCCTCTTGCTCATCTGTGGCTGGGATGGGCATGCTGGCCAGCGTGTACACAGATGATGAAGAGAGGGGTAACGCCATGGGGATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CCA 90 bp | GGTCGTAAGAGGTGTCCCCTTCTGACTTTCTGGCTGCACTCGGGATaGCTGGAGCACAAAGAGCTGAATAGCTCCATCCAAGAGCACCAA | + |
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Preference number: 5 (lower is better) Translates to: GRKRCPLLTFWLHSG*LEHKELNSSIQEHQ Trigger: TTGGTGCTCTTGGATGGAGCTATTCAGCTCTTTGTGCTCCAGCCATCCCGAGTGCAGCCAGAAAGTCAGAAGGGGACACCTCTTACGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CCA 90 bp | GCAGCCCAACTTGCACATTCTCATTTAGAAGGTCTTTGTCTTCACTaGGGCAGTCGGGAGGGACAGTCGTGTTGGTCACAGTGTGCTGTG | + |
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Preference number: 5 (lower is better) Translates to: AAQLAHSHLEGLCLH*GSREGQSCWSQCAV Trigger: CACAGCACACTGTGACCAACACGACTGTCCCTCCCGACTGCCCCAGTGAAGACAAAGACCTTCTAAATGAGAATGTGCAAGTTGGGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CCA 90 bp | AGAGAAGATGCTGTGGAAGCTTTCGGAAGTGGAGGCTGTGAGCGCTaGCCTGGCAGTCTGGATTTCCGTAGTATTTTTCTCGTGCTTAAT | + |
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Preference number: 5 (lower is better) Translates to: REDAVEAFGSGGCER*PGSLDFRSIFLVLN Trigger: ATTAAGCACGAGAAAAATACTACGGAAATCCAGACTGCCAGGCCAGCGCTCACAGCCTCCACTTCCGAAAGCTTCCACAGCATCTTCTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CCA 90 bp | CCAATTCTGTTGGTTAGAAGTCCTATGAATGGGTTGGTGAGGAGCTaGACAGTGGCTTTGGAGGCAAACAGCAGCCCAACTTGCACATTC | + |
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Preference number: 5 (lower is better) Translates to: PILLVRSPMNGLVRS*TVALEANSSPTCTF Trigger: GAATGTGCAAGTTGGGCTGCTGTTTGCCTCCAAAGCCACTGTCCAGCTCCTCACCAACCCATTCATAGGACTTCTAACCAACAGAATTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS TCA 90 bp | ACCTTCCCATTTTGTGTGCAAGTATCCCAAAAATATTGGTTCCAATaGGATAAGAGATGCTCGCTGGCAGGAAGGCAACGCCCAGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: TFPFCVQVSQKYWFQ*DKRCSLAGRQRPAA Trigger: GGCAGCTGGGCGTTGCCTTCCTGCCAGCGAGCATCTCTTATCTCATTGGAACCAATATTTTTGGGATACTTGCACACAAAATGGGAAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS TCA 90 bp | TCAGATTCTTCATCATCACCGACGGGGTACGGCTGGACATTATTCTaGGTGTACATCTTTGTCTTAATGGGGCAGTTGTGGTCCATGAGG | + |
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Preference number: 5 (lower is better) Translates to: SDSSSSPTGYGWTLF*VYIFVLMGQLWSMR Trigger: CCTCATGGACCACAACTGCCCCATTAAGACAAAGATGTACACTCAGAATAATGTCCAGCCGTACCCCGTCGGTGATGATGAAGAATCTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CAA 90 bp | AGTGTTGGTATACAATGCATTGTCTTACACGATTCTGTTTCTCAGACTGCTAGTATGAACAGGATCAGCTaGCGCGAGTGGCGGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: SVGIQCIVLHDSVSQTASMNRIS*REWRLS Trigger: GGACAGCCGCCACTCGCGCAAGCTGATCCTGTTCAT...ACTAGCAGTCTGAGAAACAGAATCGTGTAAGACAATGCATTGTATACCAACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CAA 90 bp | AGTGTTGGTATACAATGCATTGTCTTACACGATTCTGTTTCTCAGACTGCTAGTACGGTGAGCAGCATGTaGTCTAGCAGCAGCGCGAGG | + |
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Preference number: 5 (lower is better) Translates to: SVGIQCIVLHDSVSQTASTVSSM*SSSSAR Trigger: CCTCGCGCTGCTGCTAGACAACATGCTGCTCACCGT...ACTAGCAGTCTGAGAAACAGAATCGTGTAAGACAATGCATTGTATACCAACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CAA 90 bp | ATCACATCACAAGGCATCCTGGAGAAGGTTAAGCCCTGCCCTTTTAGCCATGTATCATTTAGAAGGTCTTaGTCTTCACTGGGGCAGTCG | + |
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Preference number: 5 (lower is better) Translates to: ITSQGILEKVKPCPFSHVSFRRS*SSLGQS Trigger: CGACTGCCCCAGTGAAGACAAAGACCTTCTAAATGA...TACATGGCTAAAAGGGCAGGGCTTAACCTTCTCCAGGATGCCTTGTGATGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS GCA 90 bp | AATTATCCCAATAATTGTCATGAGCCAAGGAAAGCCAATTGCCTTTaGAATAGCACCACCAGCAGAGGGACCGATAGCATACCCCATGCA | + |
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Preference number: 5 (lower is better) Translates to: NYPNNCHEPRKANCL*NSTTSRGTDSIPHA Trigger: TGCATGGGGTATGCTATCGGTCCCTCTGCTGGTGGTGCTATTGCAAAGGCAATTGGCTTTCCTTGGCTCATGACAATTATTGGGATAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CAA 90 bp | GCAATGGATGGCGTGACTAAGACAGCTCTTAAGTCATCTCACTGGAGACACATGAGCCACCTTCCCATTTaGTGTGCAAGTATCCCAAAA | + |
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Preference number: 5 (lower is better) Translates to: AMDGVTKTALKSSHWRHMSHLPI*CASIPK Trigger: TTTTGGGATACTTGCACACAAAATGGGAAGGTGGCT...CATGTGTCTCCAGTGAGATGACTTAAGAGCTGTCTTAGTCACGCCATCCATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS GCA 90 bp | AATATCAATTATCCCAATAATTGTCATGAGCCAAGGAAAGCCAATTaGCTTTGCAATAGCACCACCAGCAGAGGGACCGATAGCATACCC | + |
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Preference number: 5 (lower is better) Translates to: NINYPNNCHEPRKAN*LCNSTTSRGTDSIP Trigger: GGGTATGCTATCGGTCCCTCTGCTGGTGGTGCTATTGCAAAGGCAATTGGCTTTCCTTGGCTCATGACAATTATTGGGATAATTGATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS-3UTR CAA 90 bp | GCAGTCAAAAGGAAGTTGAGTATTCATTACTACCTCACTAAGATTTTTGTGTCTGTCTTAATGGGGCAGTaGTGGTCCATGAGGATAGCC | + |
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Preference number: 5 (lower is better) Translates to: AVKRKLSIHYYLTKIFVSVLMGQ*WSMRIA Trigger: GGCTATCCTCATGGACCACAACTGCCCCATTAAGAC...AGACACAAAAATCTTAGTGAGGTAGTAATGAATACTCAACTTCCTTTTGACTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CAA 72 bp | AGCAGCAGCGCGAGGAACACGATGAACAGGATCAGCTaGCGCGAGTGGCGGCTGTCCCGCAGCCATCGCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSSARNTMNRIS*REWRLSRSHRS Trigger: GCTGCGATGGCTGCGGGACAGCCGCCACTCGCGCAAGCTGATCCTGTTCATCGTGTTCCTCGCGCTGCTGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CCA 72 bp | GCGAGGAACACGATGAACAGGATCAGCTTGCGCGAGTaGCGGCTGTCCCGCAGCCATCGCAGCAGCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: ARNTMNRISLRE*RLSRSHRSSTR Trigger: TCTGGTGCTGCTGCGATGGCTGCGGGACAGCCGCCACTCGCGCAAGCTGATCCTGTTCATCGTGTTCCTCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS GCA 72 bp | GGGCAGTCGGGAGGGACAGTCGTGTTGGTCACAGTGTaGTGTGTGGTGGTAGCCTTGGGTGACTCCCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: GQSGGTVVLVTV*CVVVALGDSPP Trigger: AGGAGGGGAGTCACCCAAGGCTACCACCACACAGCACACTGTGACCAACACGACTGTCCCTCCCGACTGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CAA 90 bp | ATGTTGTCTAGCAGCAGCGCGAGGAACACGATGAACAGGATCAGCTaGCGCGAGTGGCGGCTGTCCCGCAGCCATCGCAGCAGCACCAGA | + |
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Preference number: 6 (lower is better) Translates to: MLSSSSARNTMNRIS*REWRLSRSHRSSTR Trigger: TCTGGTGCTGCTGCGATGGCTGCGGGACAGCCGCCACTCGCGCAAGCTGATCCTGTTCATCGTGTTCCTCGCGCTGCTGCTAGACAACAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CAA 90 bp | AGAAGGTCTTTGTCTTCACTGGGGCAGTCGGGAGGGACAGTCGTGTaGGTCACAGTGTGCTGTGTGGTGGTAGCCTTGGGTGACTCCCCT | + |
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Preference number: 6 (lower is better) Translates to: RRSLSSLGQSGGTVV*VTVCCVVVALGDSP Trigger: AGGGGAGTCACCCAAGGCTACCACCACACAGCACACTGTGACCAACACGACTGTCCCTCCCGACTGCCCCAGTGAAGACAAAGACCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CAA 72 bp | TTGTCTTCACTGGGGCAGTCGGGAGGGACAGTCGTGTaGGTCACAGTGTGCTGTGTGGTGGTAGCCTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: LSSLGQSGGTVV*VTVCCVVVALG Trigger: ACCCAAGGCTACCACCACACAGCACACTGTGACCAACACGACTGTCCCTCCCGACTGCCCCAGTGAAGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS TCA 72 bp | TCTGGCTGCACTCGGGATGGCTGGAGCACAAAGAGCTaGATAGCTCCATCCAAGAGCACCAAGGCAGCAAGC | + |
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Preference number: 6 (lower is better) Translates to: SGCTRDGWSTKS*IAPSKSTKAAS Trigger: GCTTGCTGCCTTGGTGCTCTTGGATGGAGCTATTCAGCTCTTTGTGCTCCAGCCATCCCGAGTGCAGCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CCA 72 bp | TGGCGTTACCCCTCTCTTCATCATCTGTGTACACGCTaGCCAGCATGCCCATCCCAGCCACAGATGAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: WRYPSLHHLCTR*PACPSQPQMSK Trigger: CTTGCTCATCTGTGGCTGGGATGGGCATGCTGGCCAGCGTGTACACAGATGATGAAGAGAGGGGTAACGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CAA 72 bp | CTGGGAATGATGGGAACTACGACGGTGAGCAGCATGTaGTCTAGCAGCAGCGCGAGGAACACGATGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: LGMMGTTTVSSM*SSSSARNTMNR Trigger: CCTGTTCATCGTGTTCCTCGCGCTGCTGCTAGACAACATGCTGCTCACCGTCGTAGTTCCCATCATTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CCA 72 bp | GCTGTGGAAGCTTTCGGAAGTGGAGGCTGTGAGCGCTaGCCTGGCAGTCTGGATTTCCGTAGTATTTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: AVEAFGSGGCER*PGSLDFRSIFL Trigger: GAGAAAAATACTACGGAAATCCAGACTGCCAGGCCAGCGCTCACAGCCTCCACTTCCGAAAGCTTCCACAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CCA 72 bp | AGGTGTCCCCTTCTGACTTTCTGGCTGCACTCGGGATaGCTGGAGCACAAAGAGCTGAATAGCTCCATCCAA | + |
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Preference number: 6 (lower is better) Translates to: RCPLLTFWLHSG*LEHKELNSSIQ Trigger: TTGGATGGAGCTATTCAGCTCTTTGTGCTCCAGCCATCCCGAGTGCAGCCAGAAAGTCAGAAGGGGACACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CCA 72 bp | TGCAAAGCAGATGGAGCCTGCAGCGATGAGAATGTATaGGTCCTTCAGCAAGGTCGTAAGAGGTGTCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: CKADGACSDENV*VLQQGRKRCPL Trigger: AAGGGGACACCTCTTACGACCTTGCTGAAGGACCCATACATTCTCATCGCTGCAGGCTCCATCTGCTTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CAA 90 bp | GAGGCAAACAGCAGCCCAACTTGCACATTCTCATTTAGAAGGTCTTaGTCTTCACTGGGGCAGTCGGGAGGGACAGTCGTGTTGGTCACA | + |
|
Preference number: 6 (lower is better) Translates to: EANSSPTCTFSFRRS*SSLGQSGGTVVLVT Trigger: TGTGACCAACACGACTGTCCCTCCCGACTGCCCCAGTGAAGACAAAGACCTTCTAAATGAGAATGTGCAAGTTGGGCTGCTGTTTGCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS CCA 72 bp | CTTGCACATTCTCATTTAGAAGGTCTTTGTCTTCACTaGGGCAGTCGGGAGGGACAGTCGTGTTGGTCACAG | + |
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Preference number: 6 (lower is better) Translates to: LAHSHLEGLCLH*GSREGQSCWSQ Trigger: CTGTGACCAACACGACTGTCCCTCCCGACTGCCCCAGTGAAGACAAAGACCTTCTAAATGAGAATGTGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS TCA 72 bp | TCATCATCACCGACGGGGTACGGCTGGACATTATTCTaGGTGTACATCTTTGTCTTAATGGGGCAGTTGTGG | + |
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Preference number: 6 (lower is better) Translates to: SSSPTGYGWTLF*VYIFVLMGQLW Trigger: CCACAACTGCCCCATTAAGACAAAGATGTACACTCAGAATAATGTCCAGCCGTACCCCGTCGGTGATGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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| CDS GCA 72 bp | TATCCCAATAATTGTCATGAGCCAAGGAAAGCCAATTaGCTTTGCAATAGCACCACCAGCAGAGGGACCGAT | + |
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Preference number: 6 (lower is better) Translates to: YPNNCHEPRKAN*LCNSTTSRGTD Trigger: ATCGGTCCCTCTGCTGGTGGTGCTATTGCAAAGGCAATTGGCTTTCCTTGGCTCATGACAATTATTGGGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026084.5 |
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