Pregenerated sensors for SLC18A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036330Ensembl transcript IDs: ENSMUST00000037478.13
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGGAAGGAAGGGAGTTGCCCAGAGGAGAGGAAAGTGAGACCCATTaGATCTGTGATGATCTGGTCCCCTGGGACACTGAGATTCACGCC | + |
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Preference number: 1 (lower is better) Translates to: KEGRELPRGEESETH*ICDDLVPWDTEIHA Trigger: GGCGTGAATCTCAGTGTCCCAGGGGACCAGATCATCACAGATTCAATGGGTCTCACTTTCCTCTCCTCTGGGCAACTCCCTTCCTTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR TCA 90 bp | AGCCCTGGTTTCACAGGCACGTTGTTCAGCACTGCCTGCAGGAAGTaGGTCACCCCTTGCAGAACTTGTCTCAACTCAGCTTTAATCAGC | + |
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Preference number: 1 (lower is better) Translates to: SPGFTGTLFSTACRK*VTPCRTCLNSALIS Trigger: GCTGATTAAAGCTGAGTTGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTGAACAACGTGCCTGTGAAACCAGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR TCA 90 bp | CAGAGCAGACATAACACAGACCTAGGAAAAGTGCTTATTTCCCTTTaGTTGGATGATGAGGAAAGCCAGAAGGCTTCATTTGATGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: QSRHNTDLGKVLISL*LDDEESQKASFDEV Trigger: AACTTCATCAAATGAAGCCTTCTGGCTTTCCTCATCATCCAATCAAAGGGAAATAAGCACTTTTCCTAGGTCTGTGTTATGTCTGCTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR-3UTR CCA 90 bp | CGTTGTTCAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTTGTCTCAGATGATCTGGTCCCCTaGGACACTGAGATTCACGCC | + |
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Preference number: 2 (lower is better) Translates to: RCSALPAGSESPLAELVSDDLVP*DTEIHA Trigger: GGCGTGAATCTCAGTGTCCCAGGGGACCAGATCATC...TGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTGAACAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR-3UTR CCA 90 bp | CGTTGTTCAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTTGTCTCACCTCATGGGGTCACCTaGAATGAGGCCCAGATATCA | + |
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Preference number: 2 (lower is better) Translates to: RCSALPAGSESPLAELVSPHGVT*NEAQIS Trigger: TGATATCTGGGCCTCATTCCAGGTGACCCCATGAGG...TGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTGAACAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR CAA 90 bp | GTTGTTCAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTaGTCTCAACTCAGCTTTAATCAGCTTCGCTTTGGCCTGGCAGGA | + |
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Preference number: 2 (lower is better) Translates to: VVQHCLQEVSHPLQN*SQLSFNQLRFGLAG Trigger: TCCTGCCAGGCCAAAGCGAAGCTGATTAAAGCTGAGTTGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTGAACAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR CAA 90 bp | CACAGGCACGTTGTTCAGCACTGCCTGCAGGAAGTGAGTCACCCCTaGCAGAACTTGTCTCAACTCAGCTTTAATCAGCTTCGCTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: HRHVVQHCLQEVSHP*QNLSQLSFNQLRFG Trigger: GCCAAAGCGAAGCTGATTAAAGCTGAGTTGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTGAACAACGTGCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR-3UTR CCA 90 bp | CGTTGTTCAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTTGTCTCAAGCACATTGGGAGAGTaGTGGGTTGTACTTACAGGT | + |
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Preference number: 2 (lower is better) Translates to: RCSALPAGSESPLAELVSSTLGE*WVVLTG Trigger: ACCTGTAAGTACAACCCACCACTCTCCCAATGTGCT...TGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTGAACAACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR-3UTR TCA 90 bp | TCTACTAGGAAATACACGTTTGGGGGAAATTTCAAGTTTCTTTTTGCTTCATGCTGGGGTCACCTGGAATaGGGCCCAGATATCACCCTC | + |
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Preference number: 2 (lower is better) Translates to: STRKYTFGGNFKFLFASCWGHLE*GPDITL Trigger: GAGGGTGATATCTGGGCCTCATTCCAGGTGACCCCA...GCATGAAGCAAAAAGAAACTTGAAATTTCCCCCAAACGTGTATTTCCTAGTAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR-3UTR CCA 90 bp | TCTACTAGGAAATACACGTTTGGGGGAAATTTCAAGTTTCTTTTTGCTTCATGCTTATTTCCCTTTGATTaGATGATGAGGAAAGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: STRKYTFGGNFKFLFASCLFPFD*MMRKAR Trigger: TCTGGCTTTCCTCATCATCCAATCAAAGGGAAATAA...GCATGAAGCAAAAAGAAACTTGAAATTTCCCCCAAACGTGTATTTCCTAGTAGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR TCA 72 bp | AGGGAGTTGCCCAGAGGAGAGGAAAGTGAGACCCATTaGATCTGTGATGATCTGGTCCCCTGGGACACTGAG | + |
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Preference number: 3 (lower is better) Translates to: RELPRGEESETH*ICDDLVPWDTE Trigger: CTCAGTGTCCCAGGGGACCAGATCATCACAGATTCAATGGGTCTCACTTTCCTCTCCTCTGGGCAACTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR TCA 72 bp | TTCACAGGCACGTTGTTCAGCACTGCCTGCAGGAAGTaGGTCACCCCTTGCAGAACTTGTCTCAACTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: FTGTLFSTACRK*VTPCRTCLNSA Trigger: AGCTGAGTTGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTGAACAACGTGCCTGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR-3UTR CAA 90 bp | TACACGTTTGGGGGAAATTTCAAGTTTCTTTTTGCTTCATGCAGGGAACCCTTGAGAAGAAAGGAAGGCTaGCCATTTGTAGCCCTGGTT | + |
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Preference number: 3 (lower is better) Translates to: YTFGGNFKFLFASCREPLRRKEG*PFVALV Trigger: AACCAGGGCTACAAATGGCAAGCCTTCCTTTCTTCT...CAAGGGTTCCCTGCATGAAGCAAAAAGAAACTTGAAATTTCCCCCAAACGTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR-3UTR CAA 90 bp | TCTACTAGGAAATACACGTTTGGGGGAAATTTCAAGTTTCTTTTTGCTTCATGCGAAGTGAGTCACCCCTaGCAGAACTTGTCTCAACTC | + |
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Preference number: 3 (lower is better) Translates to: STRKYTFGGNFKFLFASCEVSHP*QNLSQL Trigger: GAGTTGAGACAAGTTCTGCAAGGGGTGACTCACTTC...GCATGAAGCAAAAAGAAACTTGAAATTTCCCCCAAACGTGTATTTCCTAGTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR GCA 72 bp | GAAATACACGTTTGGGGGAAATTTCAAGTTTCTTTTTaGTTCATGCAGGGAACCCTTGAGTCTAATGCAATG | + |
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Preference number: 3 (lower is better) Translates to: EIHVWGKFQVSF*FMQGTLESNAM Trigger: CATTGCATTAGACTCAAGGGTTCCCTGCATGAAGCAAAAAGAAACTTGAAATTTCCCCCAAACGTGTATTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR CCA 72 bp | CCTGCTACAAAACCATCTGGTTCTTCATGTCTGAATTaGCTAATTGACTTACTCATTGACACGTGTGAACAA | + |
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Preference number: 3 (lower is better) Translates to: PATKPSGSSCLN*LIDLLIDTCEQ Trigger: TTGTTCACACGTGTCAATGAGTAAGTCAATTAGCCAATTCAGACATGAAGAACCAGATGGTTTTGTAGCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR GCA 72 bp | ACGTTTGGGGGAAATTTCAAGTTTCTTTTTGCTTCATaGAGGGAACCCTTGAGTCTAATGCAATGTTGTTTA | + |
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Preference number: 3 (lower is better) Translates to: TFGGNFKFLFAS*REPLSLMQCCL Trigger: TAAACAACATTGCATTAGACTCAAGGGTTCCCTGCATGAAGCAAAAAGAAACTTGAAATTTCCCCCAAACGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR TCA 90 bp | CGTTGTTCAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTTGTCTCACTGAGCCAGCTTCGGTaGCTGGAGGAGGGATGGTAC | + |
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Preference number: 4 (lower is better) Translates to: RCSALPAGSESPLAELVSLSQLR*LEEGWY Trigger: GTACCATCCCTCCTCCAGTCACCGAAGCTGGCTCAG...TGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTGAACAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR TCA 90 bp | CAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTTGTCTCAACTCAGCAAAGGTTCGTGCCAATaGGGTAGGCCACACTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: QHCLQEVSHPLQNLSQLSKGSCQ*GRPHWQ Trigger: CTGCCAGTGTGGCCTACCTCATTGGCACGAACCTTT...GCTGAGTTGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CCA 90 bp | CAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTTGTCTCAACTCAGCGCTGTTCTCTCCCAGTaGAAACTCCTTCGTGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: QHCLQEVSHPLQNLSQLSAVLSQ*KLLRGP Trigger: AGGCCCACGAAGGAGTTTCCACTGGGAGAGAACAGC...GCTGAGTTGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR GCA 90 bp | CGTTGTTCAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTTGTCTCATTAGCTGGTGGGTTCTaGAGGAAGCAGCAGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: RCSALPAGSESPLAELVSLAGGF*RKQQRG Trigger: CCCTCTCTGCTGCTTCCTGCAGAACCCACCAGCTAA...TGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTGAACAACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR TCA 90 bp | TGCCCAGAGGAGAGGAAAGTGAGACCCATTGAATCTGTGATGATCTGGTCCCCTTGGGCACCACCACAGTaGGCAGCATATTGTCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: CPEERKVRPIESVMIWSPWAPPQ*AAYCPG Trigger: TCCTGGACAATATGCTGCTCACTGTGGTGGTGCCCA...AGGGGACCAGATCATCACAGATTCAATGGGTCTCACTTTCCTCTCCTCTGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR TCA 90 bp | TGCCCAGAGGAGAGGAAAGTGAGACCCATTGAATCTGTGATGATCTGGTCCCCTCCAGGAAGGCCAAGATaGGGAATGGTGAGGACTTGC | + |
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Preference number: 4 (lower is better) Translates to: CPEERKVRPIESVMIWSPPGRPR*GMVRTC Trigger: GCAAGTCCTCACCATTCCTCATCTTGGCCTTCCTGG...AGGGGACCAGATCATCACAGATTCAATGGGTCTCACTTTCCTCTCCTCTGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CCA 90 bp | TGCCCAGAGGAGAGGAAAGTGAGACCCATTGAATCTGTGATGATCTGGTCCCCTTCGCATACAGGAAGGTaGGCACAATGGGCACCACCA | + |
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Preference number: 4 (lower is better) Translates to: CPEERKVRPIESVMIWSPSHTGR*AQWAPP Trigger: TGGTGGTGCCCATTGTGCCCACCTTCCTGTATGCGA...AGGGGACCAGATCATCACAGATTCAATGGGTCTCACTTTCCTCTCCTCTGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CCA 90 bp | TGCCCAGAGGAGAGGAAAGTGAGACCCATTGAATCTGTGATGATCTGGTCCCCTGAGGTGAGAGCTTGCTaGGAGCTTACAGAAGGACCC | + |
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Preference number: 4 (lower is better) Translates to: CPEERKVRPIESVMIWSPEVRAC*ELTEGP Trigger: GGGTCCTTCTGTAAGCTCCCAGCAAGCTCTCACCTC...AGGGGACCAGATCATCACAGATTCAATGGGTCTCACTTTCCTCTCCTCTGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CCA 90 bp | CAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTTGTCTCAACTCAGCAAAGTGGAGTCCCCATaGCACTCTCAGGAGACACTT | + |
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Preference number: 4 (lower is better) Translates to: QHCLQEVSHPLQNLSQLSKVESP*HSQETL Trigger: AAGTGTCTCCTGAGAGTGCCATGGGGACTCCACTTT...GCTGAGTTGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR TCA 90 bp | CAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTTGTCTCAACTCAGCGTACACAGAGCAAGCTaGTACCTACAGCTACCATTC | + |
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Preference number: 4 (lower is better) Translates to: QHCLQEVSHPLQNLSQLSVHRAS*YLQLPF Trigger: GAATGGTAGCTGTAGGTATCAGCTTGCTCTGTGTAC...GCTGAGTTGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR GCA 90 bp | TGCCCAGAGGAGAGGAAAGTGAGACCCATTGAATCTGTGATGATCTGGTCCCCTAGCTCCATCCAGAAGTaGCAGGAAGGCCAAGATGAG | + |
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Preference number: 4 (lower is better) Translates to: CPEERKVRPIESVMIWSPSSIQK*QEGQDE Trigger: CTCATCTTGGCCTTCCTGGCACTTCTGGATGGAGCT...AGGGGACCAGATCATCACAGATTCAATGGGTCTCACTTTCCTCTCCTCTGGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CCA 90 bp | CGTTGTTCAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTTGTCTCAGAAGATCCAATGCCTTaGAGAGTTCGGGCCACAAAC | + |
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Preference number: 4 (lower is better) Translates to: RCSALPAGSESPLAELVSEDPMP*RVRATN Trigger: GTTTGTGGCCCGAACTCTCCAAGGCATTGGATCTTC...TGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTGAACAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR CAA 72 bp | CACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTaGTCTCAACTCAGCTTTAATCAGCTTCGCTTTGGC | + |
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Preference number: 4 (lower is better) Translates to: HCLQEVSHPLQN*SQLSFNQLRFG Trigger: GCCAAAGCGAAGCTGATTAAAGCTGAGTTGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR TCA 90 bp | CGTTGTTCAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTTGTCTCAAGACCAAAAATATTGTaGGCCAGAGGTACACAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RCSALPAGSESPLAELVSRPKIL*ARGTQS Trigger: GCTCTGTGTACCTCTGGCTCACAATATTTTTGGTCT...TGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTGAACAACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR GCA 90 bp | CGTTGTTCAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTTGTCTCAACAGCAGGGCATAGGTaGCAGAGAAAGCAAACATTA | + |
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Preference number: 4 (lower is better) Translates to: RCSALPAGSESPLAELVSTAGHR*QRKQTL Trigger: TAATGTTTGCTTTCTCTGGCACCTATGCCCTGCTGT...TGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTGAACAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR GCA 90 bp | TGCCCAGAGGAGAGGAAAGTGAGACCCATTGAATCTGTGATGATCTGGTCCCCTTCGAAGGCCATAGGATaGAAAACTGGAGAGCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: CPEERKVRPIESVMIWSPSKAIG*KTGELH Trigger: ATGGAGCTCTCCAGTTTTGCATCCTATGGCCTTCGA...AGGGGACCAGATCATCACAGATTCAATGGGTCTCACTTTCCTCTCCTCTGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CCA 90 bp | CGTTGTTCAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTTGTCTCACATAGGATGCAAAACTaGAGAGCTCCATCCAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: RCSALPAGSESPLAELVSHRMQN*RAPSRS Trigger: ACTTCTGGATGGAGCTCTCCAGTTTTGCATCCTATG...TGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTGAACAACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CCA 90 bp | TGCCCAGAGGAGAGGAAAGTGAGACCCATTGAATCTGTGATGATCTGGTCCCCTTCTGCATCATCCAGATaGGTAGCGTGGGCTCTAATA | + |
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Preference number: 4 (lower is better) Translates to: CPEERKVRPIESVMIWSPSASSR*VAWALI Trigger: TATTAGAGCCCACGCTACCCATCTGGATGATGCAGA...AGGGGACCAGATCATCACAGATTCAATGGGTCTCACTTTCCTCTCCTCTGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| 3UTR CAA 72 bp | GTTGTTCAGCACTGCCTGCAGGAAGTGAGTCACCCCTaGCAGAACTTGTCTCAACTCAGCTTTAATCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: VVQHCLQEVSHP*QNLSQLSFNQL Trigger: AAGCTGATTAAAGCTGAGTTGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTGAACAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CCA 90 bp | CGTTGTTCAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTTGTCTCAAAGAGGTCCTACAAATaGGTTAACCAGAAGTTGCAT | + |
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Preference number: 4 (lower is better) Translates to: RCSALPAGSESPLAELVSKRSYK*VNQKLH Trigger: ATGCAACTTCTGGTTAACCCATTTGTAGGACCTCTT...TGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTGAACAACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CCA 90 bp | TACACGTTTGGGGGAAATTTCAAGTTTCTTTTTGCTTCATGCAGGGAACCCTTGCTCCTCCTCCTTAGCTaGTGGGTTCTGCAGGAAGCA | + |
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Preference number: 4 (lower is better) Translates to: YTFGGNFKFLFASCREPLLLLLS*WVLQEA Trigger: TGCTTCCTGCAGAACCCACCAGCTAAGGAGGAGGAG...CAAGGGTTCCCTGCATGAAGCAAAAAGAAACTTGAAATTTCCCCCAAACGTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR GCA 90 bp | AAAAATGTAGCCAAATGTCACATGATGTACAACACCCACTGTATTTTCCCACACACCAGCTTCCGGGACTaGCTCCCTTCCTTCAGCAGT | + |
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Preference number: 4 (lower is better) Translates to: KNVAKCHMMYNTHCIFPHTSFRD*LPSFSS Trigger: ACTGCTGAAGGAAGGGAGGCAGTCCCGGAAGCTGGT...GTGTGGGAAAATACAGTGGGTGTTGTACATCATGTGACATTTGGCTACATTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR GCA 90 bp | CGTTGTTCAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTTGTCTCAAAGAACTCTATCCCTTaGAAGCAGTTGTTTTTAGGT | + |
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Preference number: 4 (lower is better) Translates to: RCSALPAGSESPLAELVSKNSIP*KQLFLG Trigger: ACCTAAAAACAACTGCTTGCAAGGGATAGAGTTCTT...TGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTGAACAACG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CCA 90 bp | AAAAATGTAGCCAAATGTCACATGATGTACAACACCCACTGTATTTTCCCACACTCCTTCGTGGGCCTCTaGATTGTGTACATCTGGGTC | + |
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Preference number: 4 (lower is better) Translates to: KNVAKCHMMYNTHCIFPHSFVGL*IVYIWV Trigger: GACCCAGATGTACACAATCCAGAGGCCCACGAAGGA...GTGTGGGAAAATACAGTGGGTGTTGTACATCATGTGACATTTGGCTACATTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR TCA 90 bp | TCTACTAGGAAATACACGTTTGGGGGAAATTTCAAGTTTCTTTTTGCTTCATGCCCACCAGGTATCCCATaGTGGGCATCAGAGAGGAAT | + |
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Preference number: 4 (lower is better) Translates to: STRKYTFGGNFKFLFASCPPGIP*WASERN Trigger: ATTCCTCTCTGATGCCCATCATGGGATACCTGGTGG...GCATGAAGCAAAAAGAAACTTGAAATTTCCCCCAAACGTGTATTTCCTAGTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR GCA 90 bp | TACACGTTTGGGGGAAATTTCAAGTTTCTTTTTGCTTCATGCAGGGAACCCTTGGGAATGGTGAGGACTTaGCCACAAATTCATACATCA | + |
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Preference number: 4 (lower is better) Translates to: YTFGGNFKFLFASCREPLGMVRT*PQIHTS Trigger: TGATGTATGAATTTGTGGGCAAGTCCTCACCATTCC...CAAGGGTTCCCTGCATGAAGCAAAAAGAAACTTGAAATTTCCCCCAAACGTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR GCA 90 bp | TCTACTAGGAAATACACGTTTGGGGGAAATTTCAAGTTTCTTTTTGCTTCATGCCAGGCAGATGGAACCTaGTGCTACCAGAATGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: STRKYTFGGNFKFLFASCQADGT*CYQNVR Trigger: CCTTACATTCTGGTAGCAGCAGGTTCCATCTGCCTG...GCATGAAGCAAAAAGAAACTTGAAATTTCCCCCAAACGTGTATTTCCTAGTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CCA 90 bp | TACACGTTTGGGGGAAATTTCAAGTTTCTTTTTGCTTCATGCAGGGAACCCTTGCTTCTACAGTCATGGTaGTGTTGTCAAAGAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: YTFGGNFKFLFASCREPLLLQSW*CCQRRR Trigger: TCTCCTTCTTTGACAACACCACCATGACTGTAGAAG...CAAGGGTTCCCTGCATGAAGCAAAAAGAAACTTGAAATTTCCCCCAAACGTGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CCA 90 bp | AAAAATGTAGCCAAATGTCACATGATGTACAACACCCACTGTATTTTCCCACACCCAAAGCAATTCCCATaGCTCTTCCTCTCTCGTAGT | + |
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Preference number: 4 (lower is better) Translates to: KNVAKCHMMYNTHCIFPHPKQFP*LFLSRS Trigger: ACTACGAGAGAGGAAGAGCCATGGGAATTGCTTTGG...GTGTGGGAAAATACAGTGGGTGTTGTACATCATGTGACATTTGGCTACATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CCA 90 bp | TCTACTAGGAAATACACGTTTGGGGGAAATTTCAAGTTTCTTTTTGCTTCATGCGAGAAGTGTCAAAAGTaGAGTCCCCATGGCACTCTC | + |
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Preference number: 4 (lower is better) Translates to: STRKYTFGGNFKFLFASCEKCQK*SPHGTL Trigger: GAGAGTGCCATGGGGACTCCACTTTTGACACTTCTC...GCATGAAGCAAAAAGAAACTTGAAATTTCCCCCAAACGTGTATTTCCTAGTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CCA 90 bp | TCTACTAGGAAATACACGTTTGGGGGAAATTTCAAGTTTCTTTTTGCTTCATGCAATCCACCATGCCTATaGCAAAGCCAAGGCCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: STRKYTFGGNFKFLFASCNPPCL*QSQGLH Trigger: ATGCAGGCCTTGGCTTTGCCATAGGCATGGTGGATT...GCATGAAGCAAAAAGAAACTTGAAATTTCCCCCAAACGTGTATTTCCTAGTAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR TCA 90 bp | TCTACTAGGAAATACACGTTTGGGGGAAATTTCAAGTTTCTTTTTGCTTCATGCCAAGATGAGGAATGGTaGGGACTTGCCCACAAATTC | + |
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Preference number: 4 (lower is better) Translates to: STRKYTFGGNFKFLFASCQDEEW*GLAHKF Trigger: GAATTTGTGGGCAAGTCCTCACCATTCCTCATCTTG...GCATGAAGCAAAAAGAAACTTGAAATTTCCCCCAAACGTGTATTTCCTAGTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR GCA 90 bp | AAAAATGTAGCCAAATGTCACATGATGTACAACACCCACTGTATTTTCCCACACAAAATGAAGATCCAATaGCTTGGAGAGTTCGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: KNVAKCHMMYNTHCIFPHKMKIQ*LGEFGP Trigger: TGGCCCGAACTCTCCAAGGCATTGGATCTTCATTTT...GTGTGGGAAAATACAGTGGGTGTTGTACATCATGTGACATTTGGCTACATTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CCA 90 bp | TCTACTAGGAAATACACGTTTGGGGGAAATTTCAAGTTTCTTTTTGCTTCATGCACCGACCCATCTTGTTaGCCAACACACCAAAAAGGT | + |
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Preference number: 4 (lower is better) Translates to: STRKYTFGGNFKFLFASCTDPSC*PTHQKG Trigger: ACCTTTTTGGTGTGTTGGCCAACAAGATGGGTCGGT...GCATGAAGCAAAAAGAAACTTGAAATTTCCCCCAAACGTGTATTTCCTAGTAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR TCA 90 bp | AAAAATGTAGCCAAATGTCACATGATGTACAACACCCACTGTATTTTCCCACACGAATGTAAGGATCTTTaGGAAGTGTCAAAAGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: KNVAKCHMMYNTHCIFPHECKDL*EVSKVE Trigger: CTCCACTTTTGACACTTCTCAAAGATCCTTACATTC...GTGTGGGAAAATACAGTGGGTGTTGTACATCATGTGACATTTGGCTACATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS CCA 90 bp | GTGGGCCTCTGGATTGTGTACATCTGGGTCTCTGTGGGGCATTCCTaGTTCAGAATTGCAAGCTCCTCCTCCTTAGCTGGTGGGTTCTGC | + |
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Preference number: 5 (lower is better) Translates to: VGLWIVYIWVSVGHS*FRIASSSSLAGGFC Trigger: GCAGAACCCACCAGCTAAGGAGGAGGAGCTTGCAATTCTGAACCAGGAATGCCCCACAGAGACCCAGATGTACACAATCCAGAGGCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS GCA 90 bp | TGGCCAGCATCCCAAGCCCTGCAACAGATGAAAATGAAGATCCAATaGCTTGGAGAGTTCGGGCCACAAACAGCAGGGCATAGGTGCCAG | + |
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Preference number: 5 (lower is better) Translates to: WPASQALQQMKMKIQ*LGEFGPQTAGHRCQ Trigger: CTGGCACCTATGCCCTGCTGTTTGTGGCCCGAACTCTCCAAGGCATTGGATCTTCATTTTCATCTGTTGCAGGGCTTGGGATGCTGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS GCA 90 bp | GAGTCCCCATGGCACTCTCAGGAGACACTTTCGAAGGCCATAGGATaGAAAACTGGAGAGCTCCATCCAGAAGTGCCAGGAAGGCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: ESPWHSQETLSKAIG*KTGELHPEVPGRPR Trigger: TCTTGGCCTTCCTGGCACTTCTGGATGGAGCTCTCCAGTTTTGCATCCTATGGCCTTCGAAAGTGTCTCCTGAGAGTGCCATGGGGACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS CCA 90 bp | GGATCATCGCTGTTCTCTCCCAGTGGAAACTCCTTCGTGGGCCTCTaGATTGTGTACATCTGGGTCTCTGTGGGGCATTCCTGGTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: GSSLFSPSGNSFVGL*IVYIWVSVGHSWFR Trigger: TCTGAACCAGGAATGCCCCACAGAGACCCAGATGTACACAATCCAGAGGCCCACGAAGGAGTTTCCACTGGGAGAGAACAGCGATGATCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CAA 90 bp | CAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTTGTCTCAACTCAGCCACCGACCCATCTTGTaGGCCAACACACCAAAAAGG | + |
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Preference number: 5 (lower is better) Translates to: QHCLQEVSHPLQNLSQLSHRPIL*ANTPKR Trigger: CCTTTTTGGTGTGTTGGCCAACAAGATGGGTCGGTG...GCTGAGTTGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS CCA 90 bp | GGGGCATTCCTGGTTCAGAATTGCAAGCTCCTCCTCCTTAGCTGGTaGGTTCTGCAGGAAGCAGCAGAGAGGGGCATAGATGATGTTGAT | + |
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Preference number: 5 (lower is better) Translates to: GAFLVQNCKLLLLSW*VLQEAAERGIDDVD Trigger: ATCAACATCATCTATGCCCCTCTCTGCTGCTTCCTGCAGAACCCACCAGCTAAGGAGGAGGAGCTTGCAATTCTGAACCAGGAATGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS CCA 90 bp | TGTGGGGCATTCCTGGTTCAGAATTGCAAGCTCCTCCTCCTTAGCTaGTGGGTTCTGCAGGAAGCAGCAGAGAGGGGCATAGATGATGTT | + |
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Preference number: 5 (lower is better) Translates to: CGAFLVQNCKLLLLS*WVLQEAAERGIDDV Trigger: AACATCATCTATGCCCCTCTCTGCTGCTTCCTGCAGAACCCACCAGCTAAGGAGGAGGAGCTTGCAATTCTGAACCAGGAATGCCCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CAA 90 bp | CGTTGTTCAGCACTGCCTGCAGGAAGTGAGTCACCCCTTGCAGAACTTGTCTCAAGCCACCGACCCATCTaGTTGGCCAACACACCAAAA | + |
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Preference number: 5 (lower is better) Translates to: RCSALPAGSESPLAELVSSHRPI*LANTPK Trigger: TTTTGGTGTGTTGGCCAACAAGATGGGTCGGTGGCT...TGAGACAAGTTCTGCAAGGGGTGACTCACTTCCTGCAGGCAGTGCTGAACAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS TCA 90 bp | GAGAGCTCCATCCAGAAGTGCCAGGAAGGCCAAGATGAGGAATGGTaGGGACTTGCCCACAAATTCATACATCACACTTCCAAAAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: ESSIQKCQEGQDEEW*GLAHKFIHHTSKRC Trigger: GCACCTTTTGGAAGTGTGATGTATGAATTTGTGGGCAAGTCCTCACCATTCCTCATCTTGGCCTTCCTGGCACTTCTGGATGGAGCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CAA 90 bp | TGCCCAGAGGAGAGGAAAGTGAGACCCATTGAATCTGTGATGATCTGGTCCCCTACAGTCATGGTGGTGTaGTCAAAGAAGGAGAAGGTG | + |
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Preference number: 5 (lower is better) Translates to: CPEERKVRPIESVMIWSPTVMVV*SKKEKV Trigger: CACCTTCTCCTTCTTTGACAACACCACCATGACTGT...AGGGGACCAGATCATCACAGATTCAATGGGTCTCACTTTCCTCTCCTCTGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS TCA 90 bp | TGCAAAACTGGAGAGCTCCATCCAGAAGTGCCAGGAAGGCCAAGATaGGGAATGGTGAGGACTTGCCCACAAATTCATACATCACACTTC | + |
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Preference number: 5 (lower is better) Translates to: CKTGELHPEVPGRPR*GMVRTCPQIHTSHF Trigger: GAAGTGTGATGTATGAATTTGTGGGCAAGTCCTCACCATTCCTCATCTTGGCCTTCCTGGCACTTCTGGATGGAGCTCTCCAGTTTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CAA 90 bp | TGCCCAGAGGAGAGGAAAGTGAGACCCATTGAATCTGTGATGATCTGGTCCCCTGAAGAGTTGATGTCTTaGAACTCTGTCGCATACAGG | + |
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Preference number: 5 (lower is better) Translates to: CPEERKVRPIESVMIWSPEELMS*NSVAYR Trigger: CCTGTATGCGACAGAGTTCAAAGACATCAACTCTTC...AGGGGACCAGATCATCACAGATTCAATGGGTCTCACTTTCCTCTCCTCTGGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CAA 90 bp | TGCCCAGAGGAGAGGAAAGTGAGACCCATTGAATCTGTGATGATCTGGTCCCCTATCCCTTGCAAGCAGTaGTTTTTAGGTACTGAGCCA | + |
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Preference number: 5 (lower is better) Translates to: CPEERKVRPIESVMIWSPIPCKQ*FLGTEP Trigger: TGGCTCAGTACCTAAAAACAACTGCTTGCAAGGGAT...AGGGGACCAGATCATCACAGATTCAATGGGTCTCACTTTCCTCTCCTCTGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS TCA 90 bp | GCAAAGCCAAGGCCTGCATTGGGTCCAATAAGACCAAAAATATTGTaGGCCAGAGGTACACAGAGCAAGCTGATACCTACAGCTACCATT | + |
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Preference number: 5 (lower is better) Translates to: AKPRPALGPIRPKIL*ARGTQSKLIPTATI Trigger: AATGGTAGCTGTAGGTATCAGCTTGCTCTGTGTACCTCTGGCTCACAATATTTTTGGTCTTATTGGACCCAATGCAGGCCTTGGCTTTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CAA 90 bp | TCTACTAGGAAATACACGTTTGGGGGAAATTTCAAGTTTCTTTTTGCTTCATGCAGGAGAGGTGAGAGCTaGCTGGGAGCTTACAGAAGG | + |
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Preference number: 5 (lower is better) Translates to: STRKYTFGGNFKFLFASCRRGES*LGAYRR Trigger: CCTTCTGTAAGCTCCCAGCAAGCTCTCACCTCTCCT...GCATGAAGCAAAAAGAAACTTGAAATTTCCCCCAAACGTGTATTTCCTAGTAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS-3UTR CAA 90 bp | AAAAATGTAGCCAAATGTCACATGATGTACAACACCCACTGTATTTTCCCACACGTTGCATCAAAGCCTTaGAAGCAAATAGAATCCCAA | + |
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Preference number: 5 (lower is better) Translates to: KNVAKCHMMYNTHCIFPHVASKP*KQIESQ Trigger: TTGGGATTCTATTTGCTTCAAAGGCTTTGATGCAAC...GTGTGGGAAAATACAGTGGGTGTTGTACATCATGTGACATTTGGCTACATTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS GCA 72 bp | CATCTGGGTCTCTGTGGGGCATTCCTGGTTCAGAATTaGAAGCTCCTCCTCCTTAGCTGGTGGGTTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: HLGLCGAFLVQN*KLLLLSWWVLQ Trigger: CTGCAGAACCCACCAGCTAAGGAGGAGGAGCTTGCAATTCTGAACCAGGAATGCCCCACAGAGACCCAGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS CCA 72 bp | CTGTTCTCTCCCAGTGGAAACTCCTTCGTGGGCCTCTaGATTGTGTACATCTGGGTCTCTGTGGGGCATTCC | + |
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Preference number: 6 (lower is better) Translates to: LFSPSGNSFVGL*IVYIWVSVGHS Trigger: GGAATGCCCCACAGAGACCCAGATGTACACAATCCAGAGGCCCACGAAGGAGTTTCCACTGGGAGAGAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS CCA 72 bp | TTCCTGGTTCAGAATTGCAAGCTCCTCCTCCTTAGCTaGTGGGTTCTGCAGGAAGCAGCAGAGAGGGGCATA | + |
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Preference number: 6 (lower is better) Translates to: FLVQNCKLLLLS*WVLQEAAERGI Trigger: TATGCCCCTCTCTGCTGCTTCCTGCAGAACCCACCAGCTAAGGAGGAGGAGCTTGCAATTCTGAACCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS CCA 72 bp | CTCCTCACTGCCAGGATCATCGCTGTTCTCTCCCAGTaGAAACTCCTTCGTGGGCCTCTGGATTGTGTACAT | + |
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Preference number: 6 (lower is better) Translates to: LLTARIIAVLSQ*KLLRGPLDCVH Trigger: ATGTACACAATCCAGAGGCCCACGAAGGAGTTTCCACTGGGAGAGAACAGCGATGATCCTGGCAGTGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS GCA 72 bp | TGGCACTCTCAGGAGACACTTTCGAAGGCCATAGGATaGAAAACTGGAGAGCTCCATCCAGAAGTGCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: WHSQETLSKAIG*KTGELHPEVPG Trigger: TCCTGGCACTTCTGGATGGAGCTCTCCAGTTTTGCATCCTATGGCCTTCGAAAGTGTCTCCTGAGAGTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS CAA 72 bp | ACCATTCCAACAAGGGAGCACAGCCACCGACCCATCTaGTTGGCCAACACACCAAAAAGGTTCGTGCCAATG | + |
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Preference number: 6 (lower is better) Translates to: TIPTREHSHRPI*LANTPKRFVPM Trigger: CATTGGCACGAACCTTTTTGGTGTGTTGGCCAACAAGATGGGTCGGTGGCTGTGCTCCCTTGTTGGAATGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS CAA 90 bp | TGGGAGCTTACAGAAGGACCCCTAAGCAGAGAAGAGTTGATGTCTTaGAACTCTGTCGCATACAGGAAGGTGGGCACAATGGGCACCACC | + |
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Preference number: 6 (lower is better) Translates to: WELTEGPLSREELMS*NSVAYRKVGTMGTT Trigger: GGTGGTGCCCATTGTGCCCACCTTCCTGTATGCGACAGAGTTCAAAGACATCAACTCTTCTCTGCTTAGGGGTCCTTCTGTAAGCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS CAA 90 bp | CCATCCAGAAGTGCCAGGAAGGCCAAGATGAGGAATGGTGAGGACTaGCCCACAAATTCATACATCACACTTCCAAAAGGTGCTCCCACC | + |
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Preference number: 6 (lower is better) Translates to: PSRSARKAKMRNGED*PTNSYITLPKGAPT Trigger: GGTGGGAGCACCTTTTGGAAGTGTGATGTATGAATTTGTGGGCAAGTCCTCACCATTCCTCATCTTGGCCTTCCTGGCACTTCTGGATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS TCA 72 bp | GGAGAGCTCCATCCAGAAGTGCCAGGAAGGCCAAGATaGGGAATGGTGAGGACTTGCCCACAAATTCATACA | + |
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Preference number: 6 (lower is better) Translates to: GELHPEVPGRPR*GMVRTCPQIHT Trigger: TGTATGAATTTGTGGGCAAGTCCTCACCATTCCTCATCTTGGCCTTCCTGGCACTTCTGGATGGAGCTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS GCA 72 bp | TCCCAAGCCCTGCAACAGATGAAAATGAAGATCCAATaGCTTGGAGAGTTCGGGCCACAAACAGCAGGGCAT | + |
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Preference number: 6 (lower is better) Translates to: SQALQQMKMKIQ*LGEFGPQTAGH Trigger: ATGCCCTGCTGTTTGTGGCCCGAACTCTCCAAGGCATTGGATCTTCATTTTCATCTGTTGCAGGGCTTGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS GCA 72 bp | GGCGACTCCCATGTTGGCCAGGCAGATGGAACCTGCTaGTACCAGAATGTAAGGATCTTTGAGAAGTGTCAA | + |
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Preference number: 6 (lower is better) Translates to: GDSHVGQADGTC*YQNVRIFEKCQ Trigger: TTGACACTTCTCAAAGATCCTTACATTCTGGTAGCAGCAGGTTCCATCTGCCTGGCCAACATGGGAGTCGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS CCA 72 bp | TGGATTGTGTACATCTGGGTCTCTGTGGGGCATTCCTaGTTCAGAATTGCAAGCTCCTCCTCCTTAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: WIVYIWVSVGHS*FRIASSSSLAG Trigger: ACCAGCTAAGGAGGAGGAGCTTGCAATTCTGAACCAGGAATGCCCCACAGAGACCCAGATGTACACAATCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS GCA 72 bp | CTTGGAGAGTTCGGGCCACAAACAGCAGGGCATAGGTaGCAGAGAAAGCAAACATTAGTGTGGAGAGAAACA | + |
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Preference number: 6 (lower is better) Translates to: LGEFGPQTAGHR*QRKQTLVWRET Trigger: TGTTTCTCTCCACACTAATGTTTGCTTTCTCTGGCACCTATGCCCTGCTGTTTGTGGCCCGAACTCTCCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS CAA 72 bp | ACAGAAGGACCCCTAAGCAGAGAAGAGTTGATGTCTTaGAACTCTGTCGCATACAGGAAGGTGGGCACAATG | + |
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Preference number: 6 (lower is better) Translates to: TEGPLSREELMS*NSVAYRKVGTM Trigger: CATTGTGCCCACCTTCCTGTATGCGACAGAGTTCAAAGACATCAACTCTTCTCTGCTTAGGGGTCCTTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS CAA 72 bp | AGTGCCAGGAAGGCCAAGATGAGGAATGGTGAGGACTaGCCCACAAATTCATACATCACACTTCCAAAAGGT | + |
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Preference number: 6 (lower is better) Translates to: SARKAKMRNGED*PTNSYITLPKG Trigger: ACCTTTTGGAAGTGTGATGTATGAATTTGTGGGCAAGTCCTCACCATTCCTCATCTTGGCCTTCCTGGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS TCA 72 bp | CAAAAATATTGTGAGCCAGAGGTACACAGAGCAAGCTaGTACCTACAGCTACCATTCCAACAAGGGAGCACA | + |
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Preference number: 6 (lower is better) Translates to: QKYCEPEVHRAS*YLQLPFQQGST Trigger: TGTGCTCCCTTGTTGGAATGGTAGCTGTAGGTATCAGCTTGCTCTGTGTACCTCTGGCTCACAATATTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS TCA 72 bp | AGGCCTGCATTGGGTCCAATAAGACCAAAAATATTGTaGGCCAGAGGTACACAGAGCAAGCTGATACCTACA | + |
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Preference number: 6 (lower is better) Translates to: RPALGPIRPKIL*ARGTQSKLIPT Trigger: TGTAGGTATCAGCTTGCTCTGTGTACCTCTGGCTCACAATATTTTTGGTCTTATTGGACCCAATGCAGGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS CCA 72 bp | TACCAGAATGTAAGGATCTTTGAGAAGTGTCAAAAGTaGAGTCCCCATGGCACTCTCAGGAGACACTTTCGA | + |
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Preference number: 6 (lower is better) Translates to: YQNVRIFEKCQK*SPHGTLRRHFR Trigger: TCGAAAGTGTCTCCTGAGAGTGCCATGGGGACTCCACTTTTGACACTTCTCAAAGATCCTTACATTCTGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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| CDS GCA 72 bp | TTCGGTGACTGGAGGAGGGATGGTACCATTTATCCATaGTACACGAAAAGGTACATGTTCTTCTACAGTCAT | + |
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Preference number: 6 (lower is better) Translates to: FGDWRRDGTIYP*YTKRYMFFYSH Trigger: ATGACTGTAGAAGAACATGTACCTTTTCGTGTAGCATGGATAAATGGTACCATCCCTCCTCCAGTCACCGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000037478.13 |
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