Pregenerated sensors for SLC17A9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023393Ensembl transcript IDs: ENSMUST00000094218.4
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGCTGAGAGATCCACAGGGCGGGAACCAGGGTCTGCAAGGCAGGTaGGGACCCTGGCCCACTGCACACCGGCCCAGCTGGAGTGGCAAG | + |
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Preference number: 1 (lower is better) Translates to: VLRDPQGGNQGLQGR*GPWPTAHRPSWSGK Trigger: CTTGCCACTCCAGCTGGGCCGGTGTGCAGTGGGCCAGGGTCCTCACCTGCCTTGCAGACCCTGGTTCCCGCCCTGTGGATCTCTCAGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR TCA 90 bp | AGGACCCTGGCCCACTGCACACCGGCCCAGCTGGAGTGGCAAGCCTaGCTCCTGGAGAGAAGCAGAAACCATGGCTTCTCTATGGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: RTLAHCTPAQLEWQA*LLERSRNHGFSMVL Trigger: CAGAACCATAGAGAAGCCATGGTTTCTGCTTCTCTCCAGGAGTCAGGCTTGCCACTCCAGCTGGGCCGGTGTGCAGTGGGCCAGGGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR CCA 90 bp | CTCCTGACACAGGCCTGTGTGTACTCAGGCCTCCCCAGGAAACTGTaGTCTTGCTGTATGCTCATACGTCTGGGGTGGAGATTCCGTTTC | + |
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Preference number: 1 (lower is better) Translates to: LLTQACVYSGLPRKL*SCCMLIRLGWRFRF Trigger: GAAACGGAATCTCCACCCCAGACGTATGAGCATACAGCAAGACCACAGTTTCCTGGGGAGGCCTGAGTACACACAGGCCTGTGTCAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR CCA 90 bp | GGCTTCTCTATGGTTCTGAACGGTGTTTCTAGTGGGCCTGTCTTATaGAGACATGGTCTAATGTCTATAGACATCTTAGGTTATTGTTGC | + |
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Preference number: 1 (lower is better) Translates to: GFSMVLNGVSSGPVL*RHGLMSIDILGYCC Trigger: GCAACAATAACCTAAGATGTCTATAGACATTAGACCATGTCTCCATAAGACAGGCCCACTAGAAACACCGTTCAGAACCATAGAGAAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR-3UTR GCA 90 bp | ACCAGGGTCTGCAAGGCAGGTGAGGACCCTGGCCCACTGCACACCGGCCCAGCTATCTTAGGTTATTGTTaGTGGAGAGATGGGGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: TRVCKAGEDPGPLHTGPAILGYC*WRDGGR Trigger: CCTACCCCCATCTCTCCAGCAACAATAACCTAAGAT...AGCTGGGCCGGTGTGCAGTGGGCCAGGGTCCTCACCTGCCTTGCAGACCCTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR-3UTR TCA 90 bp | CCTGTGTGTACTCAGGCCTCCCCAGGAAACTGTGGTCTTGCTGTATGCTCATACGAGATTCCGTTTCACTaGCAGGGTTGTTATCCTCAG | + |
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Preference number: 2 (lower is better) Translates to: PVCTQASPGNCGLAVCSYEIPFH*QGCYPQ Trigger: CTGAGGATAACAACCCTGTCAGTGAAACGGAATCTC...GTATGAGCATACAGCAAGACCACAGTTTCCTGGGGAGGCCTGAGTACACACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR-3UTR CCA 90 bp | CGGCCCAGCTGGAGTGGCAAGCCTGACTCCTGGAGAGAAGCAGAAACCATGGCTTGTCTTATGGAGACATaGTCTAATGTCTATAGACAT | + |
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Preference number: 2 (lower is better) Translates to: RPSWSGKPDSWREAETMACLMET*SNVYRH Trigger: ATGTCTATAGACATTAGACCATGTCTCCATAAGACA...AGCCATGGTTTCTGCTTCTCTCCAGGAGTCAGGCTTGCCACTCCAGCTGGGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR-3UTR CCA 90 bp | TCTAGTGGGCCTGTCTTATGGAGACATGGTCTAATGTCTATAGACATCTTAGGTACTGGCAAGCGGATTTaGAGCCATGACCCTCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: SSGPVLWRHGLMSIDILGTGKRI*SHDPPP Trigger: AGGAGGAGGGTCATGGCTCCAAATCCGCTTGCCAGT...ACCTAAGATGTCTATAGACATTAGACCATGTCTCCATAAGACAGGCCCACTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR-3UTR CCA 90 bp | GCATCTTGGAGAATTCATTATCAGCTCATGAAACCACAAGCTCTACAAGAAATAGGGGTCTGTGATGTCTaGACTGCCAGGCACCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: ASWRIHYQLMKPQALQEIGVCDV*TARHLP Trigger: TGGCAGGTGCCTGGCAGTCCAGACATCACAGACCCC...TATTTCTTGTAGAGCTTGTGGTTTCATGAGCTGATAATGAATTCTCCAAGATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR-3UTR CCA 90 bp | TCTAGTGGGCCTGTCTTATGGAGACATGGTCTAATGTCTATAGACATCTTAGGTCTCCCCAGGAAACTGTaGTCTTGCTGTATGCTCATA | + |
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Preference number: 2 (lower is better) Translates to: SSGPVLWRHGLMSIDILGLPRKL*SCCMLI Trigger: TATGAGCATACAGCAAGACCACAGTTTCCTGGGGAG...ACCTAAGATGTCTATAGACATTAGACCATGTCTCCATAAGACAGGCCCACTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR-3UTR GCA 90 bp | CATTATCAGCTCATGAAACCACAAGCTCTACAAGAAATAAGTGCGGGAGGTAGAAGGAAACTGTGGTCTTaGTGTATGCTCATACGTCTG | + |
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Preference number: 2 (lower is better) Translates to: HYQLMKPQALQEISAGGRRKLWS*CMLIRL Trigger: CAGACGTATGAGCATACAGCAAGACCACAGTTTCCT...TCTACCTCCCGCACTTATTTCTTGTAGAGCTTGTGGTTTCATGAGCTGATAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR CAA 90 bp | TCTGGCAAGACTCACCACATCTATAAAGAAAATCTAATAGGCATCTaGGAGAATTCATTATCAGCTCATGAAACCACAAGCTCTACAAGA | + |
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Preference number: 2 (lower is better) Translates to: SGKTHHIYKENLIGI*ENSLSAHETTSSTR Trigger: TCTTGTAGAGCTTGTGGTTTCATGAGCTGATAATGAATTCTCCAAGATGCCTATTAGATTTTCTTTATAGATGTGGTGAGTCTTGCCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR TCA 72 bp | GATCCACAGGGCGGGAACCAGGGTCTGCAAGGCAGGTaGGGACCCTGGCCCACTGCACACCGGCCCAGCTGG | + |
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Preference number: 3 (lower is better) Translates to: DPQGGNQGLQGR*GPWPTAHRPSW Trigger: CCAGCTGGGCCGGTGTGCAGTGGGCCAGGGTCCTCACCTGCCTTGCAGACCCTGGTTCCCGCCCTGTGGATC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR TCA 72 bp | GCCCACTGCACACCGGCCCAGCTGGAGTGGCAAGCCTaGCTCCTGGAGAGAAGCAGAAACCATGGCTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: AHCTPAQLEWQA*LLERSRNHGFS Trigger: AGAGAAGCCATGGTTTCTGCTTCTCTCCAGGAGTCAGGCTTGCCACTCCAGCTGGGCCGGTGTGCAGTGGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR CCA 72 bp | CTGAACCTGAGAGAGGGCGGGACTGGCAAGCGGATTTaGAGCCATGACCCTCCTCCTGACACAGGCCTGTGT | + |
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Preference number: 3 (lower is better) Translates to: LNLREGGTGKRI*SHDPPPDTGLC Trigger: ACACAGGCCTGTGTCAGGAGGAGGGTCATGGCTCCAAATCCGCTTGCCAGTCCCGCCCTCTCTCAGGTTCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR CCA 72 bp | GCACACCGGCCCAGCTGGAGTGGCAAGCCTGACTCCTaGAGAGAAGCAGAAACCATGGCTTCTCTATGGTTC | + |
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Preference number: 3 (lower is better) Translates to: AHRPSWSGKPDS*REAETMASLWF Trigger: GAACCATAGAGAAGCCATGGTTTCTGCTTCTCTCCAGGAGTCAGGCTTGCCACTCCAGCTGGGCCGGTGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR CCA 72 bp | CAGGCCTGTGTGTACTCAGGCCTCCCCAGGAAACTGTaGTCTTGCTGTATGCTCATACGTCTGGGGTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: QACVYSGLPRKL*SCCMLIRLGWR Trigger: TCTCCACCCCAGACGTATGAGCATACAGCAAGACCACAGTTTCCTGGGGAGGCCTGAGTACACACAGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR GCA 72 bp | ACTCAGGCCTCCCCAGGAAACTGTGGTCTTGCTGTATaGTCATACGTCTGGGGTGGAGATTCCGTTTCACTG | + |
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Preference number: 3 (lower is better) Translates to: TQASPGNCGLAV*SYVWGGDSVSL Trigger: CAGTGAAACGGAATCTCCACCCCAGACGTATGAGCATACAGCAAGACCACAGTTTCCTGGGGAGGCCTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR GCA 72 bp | TGTGTGTACTCAGGCCTCCCCAGGAAACTGTGGTCTTaGTGTATGCTCATACGTCTGGGGTGGAGATTCCGT | + |
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Preference number: 3 (lower is better) Translates to: CVYSGLPRKLWS*CMLIRLGWRFR Trigger: ACGGAATCTCCACCCCAGACGTATGAGCATACAGCAAGACCACAGTTTCCTGGGGAGGCCTGAGTACACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR-3UTR CAA 90 bp | CATTATCAGCTCATGAAACCACAAGCTCTACAAGAAATAAGTGCGGGAGGTAGAGGTGCCCAGAGTAGGTaGGGGGTCAGAGCCACTCCT | + |
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Preference number: 3 (lower is better) Translates to: HYQLMKPQALQEISAGGRGAQSR*GVRATP Trigger: AGGAGTGGCTCTGACCCCCAACCTACTCTGGGCACC...TCTACCTCCCGCACTTATTTCTTGTAGAGCTTGTGGTTTCATGAGCTGATAATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR TCA 72 bp | TGGAGAGAAGCAGAAACCATGGCTTCTCTATGGTTCTaGACGGTGTTTCTAGTGGGCCTGTCTTATGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: WREAETMASLWF*TVFLVGLSYGD Trigger: GTCTCCATAAGACAGGCCCACTAGAAACACCGTTCAGAACCATAGAGAAGCCATGGTTTCTGCTTCTCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR CCA 72 bp | ATGGTTCTGAACGGTGTTTCTAGTGGGCCTGTCTTATaGAGACATGGTCTAATGTCTATAGACATCTTAGGT | + |
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Preference number: 3 (lower is better) Translates to: MVLNGVSSGPVL*RHGLMSIDILG Trigger: ACCTAAGATGTCTATAGACATTAGACCATGTCTCCATAAGACAGGCCCACTAGAAACACCGTTCAGAACCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR TCA 90 bp | GTCTGCAAGGCAGGTGAGGACCCTGGCCCACTGCACACCGGCCCAGCTGGAGTGTACAGACGGGCATGGTaGCTCGGGCGCAGTACAGCA | + |
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Preference number: 4 (lower is better) Translates to: VCKAGEDPGPLHTGPAGVYRRAW*LGRSTA Trigger: TGCTGTACTGCGCCCGAGTCACCATGCCCGTCTGTA...CACTCCAGCTGGGCCGGTGTGCAGTGGGCCAGGGTCCTCACCTGCCTTGCAGAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | ACCAGGGTCTGCAAGGCAGGTGAGGACCCTGGCCCACTGCACACCGGCCCAGCTCAAGCAGAGCACAACTaGGAGCAGATTGCCGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: TRVCKAGEDPGPLHTGPAQAEHN*EQIAAQ Trigger: CTGGGCGGCAATCTGCTCCCAGTTGTGCTCTGCTTG...AGCTGGGCCGGTGTGCAGTGGGCCAGGGTCCTCACCTGCCTTGCAGACCCTGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | ACCAGGGTCTGCAAGGCAGGTGAGGACCCTGGCCCACTGCACACCGGCCCAGCTGAAGCCAGCACAGGATaGGGCCAGGTCCTGAATGTT | + |
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Preference number: 4 (lower is better) Translates to: TRVCKAGEDPGPLHTGPAEASTG*GQVLNV Trigger: AACATTCAGGACCTGGCCCCATCCTGTGCTGGCTTC...AGCTGGGCCGGTGTGCAGTGGGCCAGGGTCCTCACCTGCCTTGCAGACCCTGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | ACCCTCCTCCTGACACAGGCCTGTGTGTACTCAGGCCTCCCCAGGAAACTGTGGCTCTGCCAGCCACACTaGTCCAGGAGCACGGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: TLLLTQACVYSGLPRKLWLCQPH*SRSTEP Trigger: AGGCTCCGTGCTCCTGGACCAGTGTGGCTGGCAGAG...CCACAGTTTCCTGGGGAGGCCTGAGTACACACAGGCCTGTGTCAGGAGGAGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | CCCATCAGCAACGTGGCTTCCTTAACAGTGGCAGTCCCACTGAACCTGAGAGAGGTCAGGAAGGCCAGGTaGCCGCTGCCGAGGTGCGCA | + |
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Preference number: 4 (lower is better) Translates to: PISNVASLTVAVPLNLREVRKAR*PLPRCA Trigger: TGCGCACCTCGGCAGCGGCCACCTGGCCTTCCTGAC...CTCTCTCAGGTTCAGTGGGACTGCCACTGTTAAGGAAGCCACGTTGCTGATGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR TCA 90 bp | ACCCTCCTCCTGACACAGGCCTGTGTGTACTCAGGCCTCCCCAGGAAACTGTGGCCCAGAAGAAGCTGCTaGGCACGATACCAGCCTCCT | + |
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Preference number: 4 (lower is better) Translates to: TLLLTQACVYSGLPRKLWPRRSC*ARYQPP Trigger: AGGAGGCTGGTATCGTGCTCAGCAGCTTCTTCTGGG...CCACAGTTTCCTGGGGAGGCCTGAGTACACACAGGCCTGTGTCAGGAGGAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR TCA 90 bp | AAGGTGCCCAGAGTAGGTTGGGGGTCAGAGCCACTCCTGAACATCTACCAGCACGCCCCAGGCGGAGGCTaGCAGCAAGATGACCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: KVPRVGWGSEPLLNIYQHAPGGG*QQDDLL Trigger: GAGAAGGTCATCTTGCTGTCAGCCTCCGCCTGGGGC...GTGCTGGTAGATGTTCAGGAGTGGCTCTGACCCCCAACCTACTCTGGGCACCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR GCA 90 bp | CAGGCCTGTGTGTACTCAGGCCTCCCCAGGAAACTGTGGTCTTGCTGTATGCTCACCAGGTCCACCCTCTaGGCCTTCCCGAACACCAGG | + |
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Preference number: 4 (lower is better) Translates to: QACVYSGLPRKLWSCCMLTRSTL*AFPNTR Trigger: CCTGGTGTTCGGGAAGGCGCAGAGGGTGGACCTGGT...GAGCATACAGCAAGACCACAGTTTCCTGGGGAGGCCTGAGTACACACAGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | GGTGAGACCTCCCATCAGCAACGTGGCTTCCTTAACAGTGGCAGTCCCACTGAAACCAGGGTCCCGACCTaGGAGCCAGCACCCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: GETSHQQRGFLNSGSPTETRVPT*EPAPTV Trigger: CACTGTGGGTGCTGGCTCCCAGGTCGGGACCCTGGT...TTCAGTGGGACTGCCACTGTTAAGGAAGCCACGTTGCTGATGGGAGGTCTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR TCA 90 bp | ACCCTCCTCCTGACACAGGCCTGTGTGTACTCAGGCCTCCCCAGGAAACTGTGGAGGCTGACAGCAAGATaGCCTTCTCTCCTCCGATGC | + |
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Preference number: 4 (lower is better) Translates to: TLLLTQACVYSGLPRKLWRLTAR*PSLLRC Trigger: GCATCGGAGGAGAGAAGGTCATCTTGCTGTCAGCCT...CCACAGTTTCCTGGGGAGGCCTGAGTACACACAGGCCTGTGTCAGGAGGAGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | GTCTGCAAGGCAGGTGAGGACCCTGGCCCACTGCACACCGGCCCAGCTGGAGTGACTGAAATACCACTGTaGTTGAAGGTCTGGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: VCKAGEDPGPLHTGPAGVTEIPL*LKVWKP Trigger: TGGCTTCCAGACCTTCAACCACAGTGGTATTTCAGT...CACTCCAGCTGGGCCGGTGTGCAGTGGGCCAGGGTCCTCACCTGCCTTGCAGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR TCA 90 bp | CATCAGCAACGTGGCTTCCTTAACAGTGGCAGTCCCACTGAACCTGAGAGAGGGTGGGGAAGGTCTCCTTaGAGAAGGTGGGCAGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HQQRGFLNSGSPTEPERGWGRSP*RRWAAR Trigger: CCTGGCTGCCCACCTTCTTCAAGGAGACCTTCCCCA...CCCTCTCTCAGGTTCAGTGGGACTGCCACTGTTAAGGAAGCCACGTTGCTGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR TCA 90 bp | CTGGCAAGCGGATTTGGAGCCATGACCCTCCTCCTGACACAGGCCTGTGTGTACTCCAGGGGACTACATTaGAGACCCAGCCCTTGGAGT | + |
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Preference number: 4 (lower is better) Translates to: LASGFGAMTLLLTQACVYSRGLH*RPSPWS Trigger: ACTCCAAGGGCTGGGTCTTCAATGTAGTCCCCTGGA...GTACACACAGGCCTGTGTCAGGAGGAGGGTCATGGCTCCAAATCCGCTTGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR TCA 90 bp | ACCCTCCTCCTGACACAGGCCTGTGTGTACTCAGGCCTCCCCAGGAAACTGTGGCAGGGCAAAAATGCTTaGCAGACCAAGGCCCATGAC | + |
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Preference number: 4 (lower is better) Translates to: TLLLTQACVYSGLPRKLWQGKNA*QTKAHD Trigger: GTCATGGGCCTTGGTCTGTCAAGCATTTTTGCCCTG...CCACAGTTTCCTGGGGAGGCCTGAGTACACACAGGCCTGTGTCAGGAGGAGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | GGTGAGACCTCCCATCAGCAACGTGGCTTCCTTAACAGTGGCAGTCCCACTGAAGGTCTCCTCTGGGATTaGCTGCATCAGGCTAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: GETSHQQRGFLNSGSPTEGLLWD*LHQARA Trigger: CGCTCTAGCCTGATGCAGCCAATCCCAGAGGAGACC...TTCAGTGGGACTGCCACTGTTAAGGAAGCCACGTTGCTGATGGGAGGTCTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | GTACTCAGGCCTCCCCAGGAAACTGTGGTCTTGCTGTATGCTCATACGTCTGGGCTTGCGGGTCTCCTCTaGGATTGGCTGCATCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: VLRPPQETVVLLYAHTSGLAGLL*DWLHQA Trigger: AGCCTGATGCAGCCAATCCCAGAGGAGACCCGCAAG...CCCAGACGTATGAGCATACAGCAAGACCACAGTTTCCTGGGGAGGCCTGAGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR TCA 90 bp | CAGGCCTGTGTGTACTCAGGCCTCCCCAGGAAACTGTGGTCTTGCTGTATGCTCCAAGGTGAGGCCACCTaGGAAGTAGAAGACACTCTG | + |
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Preference number: 4 (lower is better) Translates to: QACVYSGLPRKLWSCCMLQGEAT*EVEDTL Trigger: CAGAGTGTCTTCTACTTCTCAGGTGGCCTCACCTTG...GAGCATACAGCAAGACCACAGTTTCCTGGGGAGGCCTGAGTACACACAGGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | CATCAGCAACGTGGCTTCCTTAACAGTGGCAGTCCCACTGAACCTGAGAGAGGGAGGCCCCTGCAGTGTTaGCTACACCAAACAGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: HQQRGFLNSGSPTEPERGRPLQC*LHQTGS Trigger: GCTTCCTGTTTGGTGTAGCCAACACTGCAGGGGCCT...CCCTCTCTCAGGTTCAGTGGGACTGCCACTGTTAAGGAAGCCACGTTGCTGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR CAA 72 bp | CTGTGTGTACTCAGGCCTCCCCAGGAAACTGTGGTCTaGCTGTATGCTCATACGTCTGGGGTGGAGATTCCG | + |
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Preference number: 4 (lower is better) Translates to: LCVLRPPQETVV*LYAHTSGVEIP Trigger: CGGAATCTCCACCCCAGACGTATGAGCATACAGCAAGACCACAGTTTCCTGGGGAGGCCTGAGTACACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR TCA 90 bp | ACCCTCCTCCTGACACAGGCCTGTGTGTACTCAGGCCTCCCCAGGAAACTGTGGGAAGCCAATGGAAGCTaGTGCAAAGATCATAGCCTT | + |
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Preference number: 4 (lower is better) Translates to: TLLLTQACVYSGLPRKLWEANGS*CKDHSL Trigger: AAGGCTATGATCTTTGCATCAGCTTCCATTGGCTTC...CCACAGTTTCCTGGGGAGGCCTGAGTACACACAGGCCTGTGTCAGGAGGAGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | GTACTCAGGCCTCCCCAGGAAACTGTGGTCTTGCTGTATGCTCATACGTCTGGGTCTGGGACAGCAGACTaGTCAGGGCTGGAAAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: VLRPPQETVVLLYAHTSGSGTAD*SGLESR Trigger: TCTACTTTCCAGCCCTGACCAGTCTGCTGTCCCAGA...CCCAGACGTATGAGCATACAGCAAGACCACAGTTTCCTGGGGAGGCCTGAGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR GCA 90 bp | GTACTCAGGCCTCCCCAGGAAACTGTGGTCTTGCTGTATGCTCATACGTCTGGGGACACAGGGCAAAAATaGTTGACAGACCAAGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: VLRPPQETVVLLYAHTSGDTGQK*LTDQGP Trigger: TGGGCCTTGGTCTGTCAAGCATTTTTGCCCTGTGTC...CCCAGACGTATGAGCATACAGCAAGACCACAGTTTCCTGGGGAGGCCTGAGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR TCA 90 bp | GGTGAGACCTCCCATCAGCAACGTGGCTTCCTTAACAGTGGCAGTCCCACTGAACCAGGTCCTGAATGTTaGCTGAAATACCACTGTGGT | + |
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Preference number: 4 (lower is better) Translates to: GETSHQQRGFLNSGSPTEPGPEC*LKYHCG Trigger: ACCACAGTGGTATTTCAGTCAACATTCAGGACCTGG...TTCAGTGGGACTGCCACTGTTAAGGAAGCCACGTTGCTGATGGGAGGTCTCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR GCA 90 bp | ACTCCTGAACATCTACCAGCACACAACACATCCTTAACACAAAAGTCTTGTCAGCCTTCTCTCCTCCGATaGGATCCCCAAGGTGGCCGC | + |
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Preference number: 4 (lower is better) Translates to: TPEHLPAHNTSLTQKSCQPSLLR*DPQGGR Trigger: GCGGCCACCTTGGGGATCGCATCGGAGGAGAGAAGG...CTGACAAGACTTTTGTGTTAAGGATGTGTTGTGTGCTGGTAGATGTTCAGGAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR GCA 90 bp | CATTATCAGCTCATGAAACCACAAGCTCTACAAGAAATAAGTGCGGGAGGTAGACCGCAGAAGGGGTCTTaGGGGTCTCCTCTGGGATTG | + |
|
Preference number: 4 (lower is better) Translates to: HYQLMKPQALQEISAGGRPQKGS*GSPLGL Trigger: CAATCCCAGAGGAGACCCGCAAGACCCCTTCTGCGG...TCTACCTCCCGCACTTATTTCTTGTAGAGCTTGTGGTTTCATGAGCTGATAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR TCA 90 bp | TTAACACAAAAGTCTTGTCAGGAAACAACCCTCACTGTGGCCGGTGAGACCTCCAAATACCACTGTGGTTaGAGGTCTGGAAGCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LTQKSCQETTLTVAGETSKYHCG*RSGSQW Trigger: CCATTGGCTTCCAGACCTTCAACCACAGTGGTATTT...GGAGGTCTCACCGGCCACAGTGAGGGTTGTTTCCTGACAAGACTTTTGTGTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR GCA 90 bp | TCTAGTGGGCCTGTCTTATGGAGACATGGTCTAATGTCTATAGACATCTTAGGTAGTACAGCAGGCAGGTaGCCAGGAGCAGGATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSGPVLWRHGLMSIDILGSTAGR*PGAGFL Trigger: CAGGAATCCTGCTCCTGGGCACCTGCCTGCTGTACT...ACCTAAGATGTCTATAGACATTAGACCATGTCTCCATAAGACAGGCCCACTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | CATTATCAGCTCATGAAACCACAAGCTCTACAAGAAATAAGTGCGGGAGGTAGAAGAGGTCCTCATGAGTaGGGACCAGGTCCACCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HYQLMKPQALQEISAGGRRGPHE*GPGPPS Trigger: AGAGGGTGGACCTGGTCCCCACTCATGAGGACCTCT...TCTACCTCCCGCACTTATTTCTTGTAGAGCTTGTGGTTTCATGAGCTGATAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | TCTAGTGGGCCTGTCTTATGGAGACATGGTCTAATGTCTATAGACATCTTAGGTGCACTTTGGAGGGCTTaGTCACAGGTAGGCCTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SSGPVLWRHGLMSIDILGALWRA*SQVGLE Trigger: CTCAAGGCCTACCTGTGACCAAGCCCTCCAAAGTGC...ACCTAAGATGTCTATAGACATTAGACCATGTCTCCATAAGACAGGCCCACTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | TCTAGTGGGCCTGTCTTATGGAGACATGGTCTAATGTCTATAGACATCTTAGGTGTCTCCAGGGCACTTTaGAGGGCTTGGTCACAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSGPVLWRHGLMSIDILGVSRAL*RAWSQV Trigger: TACCTGTGACCAAGCCCTCCAAAGTGCCCTGGAGAC...ACCTAAGATGTCTATAGACATTAGACCATGTCTCCATAAGACAGGCCCACTAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | TTAACACAAAAGTCTTGTCAGGAAACAACCCTCACTGTGGCCGGTGAGACCTCCAGGTCTGGAAGCCAATaGAAGCTGATGCAAAGATCA | + |
|
Preference number: 4 (lower is better) Translates to: LTQKSCQETTLTVAGETSRSGSQ*KLMQRS Trigger: TGATCTTTGCATCAGCTTCCATTGGCTTCCAGACCT...GGAGGTCTCACCGGCCACAGTGAGGGTTGTTTCCTGACAAGACTTTTGTGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR TCA 90 bp | ATGGAGACATGGTCTAATGTCTATAGACATCTTAGGTTATTGTTGCTGGAGAGAACGCCCAGAGCAAGGTaGGGCCACCTGAGAAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: METWSNVYRHLRLLLLERTPRAR*GHLRSR Trigger: TCTACTTCTCAGGTGGCCTCACCTTGCTCTGGGCGT...TCTCTCCAGCAACAATAACCTAAGATGTCTATAGACATTAGACCATGTCTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | ACATGGTCTAATGTCTATAGACATCTTAGGTTATTGTTGCTGGAGAGATGGGGGCAAAGTCCTGGCTCATaGCAACAGTACAGACGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TWSNVYRHLRLLLLERWGQSPGS*QQYRRA Trigger: TGCCCGTCTGTACTGTTGCCATGAGCCAGGACTTTG...CCCCCATCTCTCCAGCAACAATAACCTAAGATGTCTATAGACATTAGACCATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
||
| CDS-3UTR CCA 90 bp | CATTATCAGCTCATGAAACCACAAGCTCTACAAGAAATAAGTGCGGGAGGTAGACTCTCCTGTACTTTCTaGGACAGCAGACTGGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HYQLMKPQALQEISAGGRLSCTF*DSRLVR Trigger: CCTGACCAGTCTGCTGTCCCAGAAAGTACAGGAGAG...TCTACCTCCCGCACTTATTTCTTGTAGAGCTTGTGGTTTCATGAGCTGATAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | ACTCCTGAACATCTACCAGCACACAACACATCCTTAACACAAAAGTCTTGTCAGTTCCAGCCAAAGTCCTaGCTCATGGCAACAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: TPEHLPAHNTSLTQKSCQFQPKS*LMATVQ Trigger: CTGTACTGTTGCCATGAGCCAGGACTTTGGCTGGAA...CTGACAAGACTTTTGTGTTAAGGATGTGTTGTGTGCTGGTAGATGTTCAGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | ATGGAGACATGGTCTAATGTCTATAGACATCTTAGGTTATTGTTGCTGGAGAGACAGACTGGTCAGGGCTaGAAAGTAGACACCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: METWSNVYRHLRLLLLERQTGQG*KVDTLE Trigger: CTCCAAGGTGTCTACTTTCCAGCCCTGACCAGTCTG...TCTCTCCAGCAACAATAACCTAAGATGTCTATAGACATTAGACCATGTCTCCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CCA 90 bp | ACTCCTGAACATCTACCAGCACACAACACATCCTTAACACAAAAGTCTTGTCAGCTGTGGTTGAAGGTCTaGAAGCCAATGGAAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TPEHLPAHNTSLTQKSCQLWLKV*KPMEAD Trigger: ATCAGCTTCCATTGGCTTCCAGACCTTCAACCACAG...CTGACAAGACTTTTGTGTTAAGGATGTGTTGTGTGCTGGTAGATGTTCAGGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR TCA 90 bp | GCATCTTGGAGAATTCATTATCAGCTCATGAAACCACAAGCTCTACAAGAAATAAGGAAGCTTGTGGTATaGCCCAGACACAGGGCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASWRIHYQLMKPQALQEIRKLVV*PRHRAK Trigger: TTTTGCCCTGTGTCTGGGTCATACCACAAGCTTCCT...TATTTCTTGTAGAGCTTGTGGTTTCATGAGCTGATAATGAATTCTCCAAGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| 3UTR CAA 72 bp | ACTCACCACATCTATAAAGAAAATCTAATAGGCATCTaGGAGAATTCATTATCAGCTCATGAAACCACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: THHIYKENLIGI*ENSLSAHETTS Trigger: GCTTGTGGTTTCATGAGCTGATAATGAATTCTCCAAGATGCCTATTAGATTTTCTTTATAGATGTGGTGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CCA 90 bp | CAGTACAGCAGGCAGGTGCCCAGGAGCAGGATTCCTGTCCAGGCCTaGCATTCAGGCCTGGACCACCGTGTATCCTCTGCTGCCGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: QYSRQVPRSRIPVQA*HSGLDHRVSSAAAE Trigger: TTCTGCGGCAGCAGAGGATACACGGTGGTCCAGGCCTGAATGCCAGGCCTGGACAGGAATCCTGCTCCTGGGCACCTGCCTGCTGTACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS TCA 90 bp | GGCCGCCCACCACCTGAGTCAGGCAGTAGCCCCAGAAGAAGCTGCTaGGCACGATACCAGCCTCCTTCTTGTTCCAGCCAAAGTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRPPPESGSSPRRSC*ARYQPPSCSSQSPG Trigger: GCCAGGACTTTGGCTGGAACAAGAAGGAGGCTGGTATCGTGCTCAGCAGCTTCTTCTGGGGCTACTGCCTGACTCAGGTGGTGGGCGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS GCA 90 bp | AGGATTCGAGAGAATGTCAGGAAGGCCAGGTGGCCGCTGCCGAGGTaGGCAAGCAGTGGTGTGGTGACAGTAATGAAGCCCCAGGCGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RIRENVRKARWPLPR*ASSGVVTVMKPQAE Trigger: CTCCGCCTGGGGCTTCATTACTGTCACCACACCACTGCTTGCGCACCTCGGCAGCGGCCACCTGGCCTTCCTGACATTCTCTCGAATCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CAA 90 bp | CTGGCAAGCGGATTTGGAGCCATGACCCTCCTCCTGACACAGGCCTGTGTGTACGTGCCCAGCCCCAGGTaGCTGATGATGGCTACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LASGFGAMTLLLTQACVYVPSPR*LMMATR Trigger: CCTGGTAGCCATCATCAGCAACCTGGGGCTGGGCAC...GTACACACAGGCCTGTGTCAGGAGGAGGGTCATGGCTCCAAATCCGCTTGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS TCA 90 bp | GCAGACTGGTCAGGGCTGGAAAGTAGACACCTTGGAGCAGACCGGTaGGGATTCGAGAGAATGTCAGGAAGGCCAGGTGGCCGCTGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: ADWSGLESRHLGADR*GFERMSGRPGGRCR Trigger: TCGGCAGCGGCCACCTGGCCTTCCTGACATTCTCTCGAATCCTCACCGGTCTGCTCCAAGGTGTCTACTTTCCAGCCCTGACCAGTCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CCA 90 bp | TGGAGCAGACCGGTGAGGATTCGAGAGAATGTCAGGAAGGCCAGGTaGCCGCTGCCGAGGTGCGCAAGCAGTGGTGTGGTGACAGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: WSRPVRIRENVRKAR*PLPRCASSGVVTVM Trigger: CATTACTGTCACCACACCACTGCTTGCGCACCTCGGCAGCGGCCACCTGGCCTTCCTGACATTCTCTCGAATCCTCACCGGTCTGCTCCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CCA 90 bp | CACTCAGACACACGCCTACCACACCTGCTAAGGCCCCTGCAGTGTTaGCTACACCAAACAGGAAGCCAGCACAGGATGGGGCCAGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: HSDTRLPHLLRPLQC*LHQTGSQHRMGPGP Trigger: AGGACCTGGCCCCATCCTGTGCTGGCTTCCTGTTTGGTGTAGCCAACACTGCAGGGGCCTTAGCAGGTGTGGTAGGCGTGTGTCTGAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CCA 90 bp | CTGCTGAGCACGATACCAGCCTCCTTCTTGTTCCAGCCAAAGTCCTaGCTCATGGCAACAGTACAGACGGGCATGGTGACTCGGGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLSTIPASFLFQPKS*LMATVQTGMVTRAQ Trigger: CTGCGCCCGAGTCACCATGCCCGTCTGTACTGTTGCCATGAGCCAGGACTTTGGCTGGAACAAGAAGGAGGCTGGTATCGTGCTCAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS TCA 90 bp | CAGGTACCTGTACACATAGTACGCCCAGAGCAAGGTGAGGCCACCTaGGAAGTAGAAGACACTCTGCCAGCCACACTGGTCCAGGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: QVPVHIVRPEQGEAT*EVEDTLPATLVQEH Trigger: GTGCTCCTGGACCAGTGTGGCTGGCAGAGTGTCTTCTACTTCTCAGGTGGCCTCACCTTGCTCTGGGCGTACTATGTGTACAGGTACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CAA 90 bp | CAGGCCTGTGTGTACTCAGGCCTCCCCAGGAAACTGTGGTCTTGCTGTATGCTCATCCAGGGGACTACATaGAAGACCCAGCCCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: QACVYSGLPRKLWSCCMLIQGTT*KTQPLE Trigger: CTCCAAGGGCTGGGTCTTCAATGTAGTCCCCTGGAT...GAGCATACAGCAAGACCACAGTTTCCTGGGGAGGCCTGAGTACACACAGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CAA 90 bp | AAGGTGCCCAGAGTAGGTTGGGGGTCAGAGCCACTCCTGAACATCTACCAGCACATACCAGCCTCCTTCTaGTTCCAGCCAAAGTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KVPRVGWGSEPLLNIYQHIPASF*FQPKSW Trigger: CCAGGACTTTGGCTGGAACAAGAAGGAGGCTGGTAT...GTGCTGGTAGATGTTCAGGAGTGGCTCTGACCCCCAACCTACTCTGGGCACCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CCA 90 bp | TCTCTCGCTCTCCTGTACTTTCTGGGACAGCAGACTGGTCAGGGCTaGAAAGTAGACACCTTGGAGCAGACCGGTGAGGATTCGAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SLALLYFLGQQTGQG*KVDTLEQTGEDSRE Trigger: TTCTCTCGAATCCTCACCGGTCTGCTCCAAGGTGTCTACTTTCCAGCCCTGACCAGTCTGCTGTCCCAGAAAGTACAGGAGAGCGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CAA 90 bp | GGTGAGACCTCCCATCAGCAACGTGGCTTCCTTAACAGTGGCAGTCCCACTGAATGGAAAGTAGACACCTaGGAGCAGACCGGTGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GETSHQQRGFLNSGSPTEWKVDT*EQTGED Trigger: ATCCTCACCGGTCTGCTCCAAGGTGTCTACTTTCCA...TTCAGTGGGACTGCCACTGTTAAGGAAGCCACGTTGCTGATGGGAGGTCTCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CAA 90 bp | CTGGCAAGCGGATTTGGAGCCATGACCCTCCTCCTGACACAGGCCTGTGTGTACGAAATACCACTGTGGTaGAAGGTCTGGAAGCCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LASGFGAMTLLLTQACVYEIPLW*KVWKPM Trigger: CATTGGCTTCCAGACCTTCAACCACAGTGGTATTTC...GTACACACAGGCCTGTGTCAGGAGGAGGGTCATGGCTCCAAATCCGCTTGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS TCA 90 bp | TTGGCTACACCAAACAGGAAGCCAGCACAGGATGGGGCCAGGTCCTaGATGTTGACTGAAATACCACTGTGGTTGAAGGTCTGGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LATPNRKPAQDGARS*MLTEIPLWLKVWKP Trigger: TGGCTTCCAGACCTTCAACCACAGTGGTATTTCAGTCAACATTCAGGACCTGGCCCCATCCTGTGCTGGCTTCCTGTTTGGTGTAGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS TCA 90 bp | CTTGAGGAAGCTTGTGGTATGACCCAGACACAGGGCAAAAATGCTTaGCAGACCAAGGCCCATGACCTGCATGAACTTACGCACCGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LEEACGMTQTQGKNA*QTKAHDLHELTHRD Trigger: ATCACGGTGCGTAAGTTCATGCAGGTCATGGGCCTTGGTCTGTCAAGCATTTTTGCCCTGTGTCTGGGTCATACCACAAGCTTCCTCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS TCA 90 bp | ATGGAAGCTGATGCAAAGATCATAGCCTTGAGGAAGCTTGTGGTATaGCCCAGACACAGGGCAAAAATGCTTGACAGACCAAGGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: MEADAKIIALRKLVV*PRHRAKMLDRPRPM Trigger: CATGGGCCTTGGTCTGTCAAGCATTTTTGCCCTGTGTCTGGGTCATACCACAAGCTTCCTCAAGGCTATGATCTTTGCATCAGCTTCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CAA 90 bp | ACTCCTGAACATCTACCAGCACACAACACATCCTTAACACAAAAGTCTTGTCAGTTGAAGACCCAGCCCTaGGAGTTGGGGAAGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPEHLPAHNTSLTQKSCQLKTQP*ELGKVS Trigger: GGAGACCTTCCCCAACTCCAAGGGCTGGGTCTTCAA...CTGACAAGACTTTTGTGTTAAGGATGTGTTGTGTGCTGGTAGATGTTCAGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS-3UTR CAA 90 bp | ATGGAGACATGGTCTAATGTCTATAGACATCTTAGGTTATTGTTGCTGGAGAGATGTCTCCAGGGCACTTaGGAGGGCTTGGTCACAGGT | + |
|
Preference number: 5 (lower is better) Translates to: METWSNVYRHLRLLLLERCLQGT*EGLVTG Trigger: ACCTGTGACCAAGCCCTCCAAAGTGCCCTGGAGACA...TCTCTCCAGCAACAATAACCTAAGATGTCTATAGACATTAGACCATGTCTCCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CCA 72 bp | GAAGGCCAGGTGGCCGCTGCCGAGGTGCGCAAGCAGTaGTGTGGTGACAGTAATGAAGCCCCAGGCGGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: EGQVAAAEVRKQ*CGDSNEAPGGG Trigger: GCCTCCGCCTGGGGCTTCATTACTGTCACCACACCACTGCTTGCGCACCTCGGCAGCGGCCACCTGGCCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CCA 72 bp | CTCTGCTGCCGCAGAAGGGGTCTTGCGGGTCTCCTCTaGGATTGGCTGCATCAGGCTAGAGCGCTGGGATGG | + |
|
Preference number: 6 (lower is better) Translates to: LCCRRRGLAGLL*DWLHQARALGW Trigger: CCATCCCAGCGCTCTAGCCTGATGCAGCCAATCCCAGAGGAGACCCGCAAGACCCCTTCTGCGGCAGCAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CCA 72 bp | GGAGCAGGATTCCTGTCCAGGCCTGGCATTCAGGCCTaGACCACCGTGTATCCTCTGCTGCCGCAGAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GAGFLSRPGIQA*TTVYPLLPQKG Trigger: CCCCTTCTGCGGCAGCAGAGGATACACGGTGGTCCAGGCCTGAATGCCAGGCCTGGACAGGAATCCTGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CCA 72 bp | CCGGTGAGGATTCGAGAGAATGTCAGGAAGGCCAGGTaGCCGCTGCCGAGGTGCGCAAGCAGTGGTGTGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PVRIRENVRKAR*PLPRCASSGVV Trigger: CACCACACCACTGCTTGCGCACCTCGGCAGCGGCCACCTGGCCTTCCTGACATTCTCTCGAATCCTCACCGG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CAA 90 bp | TCAGGCCTGGACCACCGTGTATCCTCTGCTGCCGCAGAAGGGGTCTaGCGGGTCTCCTCTGGGATTGGCTGCATCAGGCTAGAGCGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SGLDHRVSSAAAEGV*RVSSGIGCIRLERW Trigger: CCAGCGCTCTAGCCTGATGCAGCCAATCCCAGAGGAGACCCGCAAGACCCCTTCTGCGGCAGCAGAGGATACACGGTGGTCCAGGCCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS TCA 72 bp | AGTCCTGGCTCATGGCAACAGTACAGACGGGCATGGTaGCTCGGGCGCAGTACAGCAGGCAGGTGCCCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPGSWQQYRRAW*LGRSTAGRCPG Trigger: TCCTGGGCACCTGCCTGCTGTACTGCGCCCGAGTCACCATGCCCGTCTGTACTGTTGCCATGAGCCAGGACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CCA 72 bp | AGGCAGGTGCCCAGGAGCAGGATTCCTGTCCAGGCCTaGCATTCAGGCCTGGACCACCGTGTATCCTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RQVPRSRIPVQA*HSGLDHRVSSA Trigger: AGCAGAGGATACACGGTGGTCCAGGCCTGAATGCCAGGCCTGGACAGGAATCCTGCTCCTGGGCACCTGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CAA 90 bp | CCACTCAGACACACGCCTACCACACCTGCTAAGGCCCCTGCAGTGTaGGCTACACCAAACAGGAAGCCAGCACAGGATGGGGCCAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLRHTPTTPAKAPAV*ATPNRKPAQDGARS Trigger: GGACCTGGCCCCATCCTGTGCTGGCTTCCTGTTTGGTGTAGCCAACACTGCAGGGGCCTTAGCAGGTGTGGTAGGCGTGTGTCTGAGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CAA 90 bp | ACCCTCTGCGCCTTCCCGAACACCAGGAAGGTGCCCAGCCCCAGGTaGCTGATGATGGCTACCAGGTGGAACACACAGGTCCAGGAACCA | + |
|
Preference number: 6 (lower is better) Translates to: TLCAFPNTRKVPSPR*LMMATRWNTQVQEP Trigger: TGGTTCCTGGACCTGTGTGTTCCACCTGGTAGCCATCATCAGCAACCTGGGGCTGGGCACCTTCCTGGTGTTCGGGAAGGCGCAGAGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
||
| CDS GCA 72 bp | GAGAATGTCAGGAAGGCCAGGTGGCCGCTGCCGAGGTaGGCAAGCAGTGGTGTGGTGACAGTAATGAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ENVRKARWPLPR*ASSGVVTVMKP Trigger: GGGCTTCATTACTGTCACCACACCACTGCTTGCGCACCTCGGCAGCGGCCACCTGGCCTTCCTGACATTCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CAA 72 bp | GACCACCGTGTATCCTCTGCTGCCGCAGAAGGGGTCTaGCGGGTCTCCTCTGGGATTGGCTGCATCAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: DHRVSSAAAEGV*RVSSGIGCIRL Trigger: TAGCCTGATGCAGCCAATCCCAGAGGAGACCCGCAAGACCCCTTCTGCGGCAGCAGAGGATACACGGTGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
||
| CDS CCA 72 bp | ACACGCCTACCACACCTGCTAAGGCCCCTGCAGTGTTaGCTACACCAAACAGGAAGCCAGCACAGGATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: TRLPHLLRPLQC*LHQTGSQHRMG Trigger: CCCCATCCTGTGCTGGCTTCCTGTTTGGTGTAGCCAACACTGCAGGGGCCTTAGCAGGTGTGGTAGGCGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
||
| CDS CCA 72 bp | GTGCCCAGCCCCAGGTTGCTGATGATGGCTACCAGGTaGAACACACAGGTCCAGGAACCAGTGGTCTCGATC | + |
|
Preference number: 6 (lower is better) Translates to: VPSPRLLMMATR*NTQVQEPVVSI Trigger: GATCGAGACCACTGGTTCCTGGACCTGTGTGTTCCACCTGGTAGCCATCATCAGCAACCTGGGGCTGGGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CAA 72 bp | CACACGCCTACCACACCTGCTAAGGCCCCTGCAGTGTaGGCTACACCAAACAGGAAGCCAGCACAGGATGGG | + |
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Preference number: 6 (lower is better) Translates to: HTPTTPAKAPAV*ATPNRKPAQDG Trigger: CCCATCCTGTGCTGGCTTCCTGTTTGGTGTAGCCAACACTGCAGGGGCCTTAGCAGGTGTGGTAGGCGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS TCA 72 bp | CAGGGCACTTTGGAGGGCTTGGTCACAGGTAGGCCTTaGGCAAGGAATCCCAGGGCCAGGACAAGGTCTTTC | + |
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Preference number: 6 (lower is better) Translates to: QGTLEGLVTGRP*ARNPRARTRSF Trigger: GAAAGACCTTGTCCTGGCCCTGGGATTCCTTGCTCAAGGCCTACCTGTGACCAAGCCCTCCAAAGTGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS TCA 72 bp | TCAGGGCTGGAAAGTAGACACCTTGGAGCAGACCGGTaGGGATTCGAGAGAATGTCAGGAAGGCCAGGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SGLESRHLGADR*GFERMSGRPGG Trigger: GCCACCTGGCCTTCCTGACATTCTCTCGAATCCTCACCGGTCTGCTCCAAGGTGTCTACTTTCCAGCCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CCA 72 bp | TGGCTACCAGGTGGAACACACAGGTCCAGGAACCAGTaGTCTCGATCAGGTAGCCACTCAGACACACGCCTA | + |
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Preference number: 6 (lower is better) Translates to: WLPGGTHRSRNQ*SRSGSHSDTRL Trigger: TAGGCGTGTGTCTGAGTGGCTACCTGATCGAGACCACTGGTTCCTGGACCTGTGTGTTCCACCTGGTAGCCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CAA 90 bp | ATTGCCAGCATCCAGGGGACTACATTGAAGACCCAGCCCTTGGAGTaGGGGAAGGTCTCCTTGAAGAAGGTGGGCAGCCAGGAGAGTAGA | + |
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Preference number: 6 (lower is better) Translates to: IASIQGTTLKTQPLE*GKVSLKKVGSQESR Trigger: TCTACTCTCCTGGCTGCCCACCTTCTTCAAGGAGACCTTCCCCAACTCCAAGGGCTGGGTCTTCAATGTAGTCCCCTGGATGCTGGCAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS CCA 72 bp | CTCTCTCGCTCTCCTGTACTTTCTGGGACAGCAGACTaGTCAGGGCTGGAAAGTAGACACCTTGGAGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: LSRSPVLSGTAD*SGLESRHLGAD Trigger: GTCTGCTCCAAGGTGTCTACTTTCCAGCCCTGACCAGTCTGCTGTCCCAGAAAGTACAGGAGAGCGAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS TCA 72 bp | GCCAGCACAGGATGGGGCCAGGTCCTGAATGTTGACTaGAATACCACTGTGGTTGAAGGTCTGGAAGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: ASTGWGQVLNVD*NTTVVEGLEAN Trigger: ATTGGCTTCCAGACCTTCAACCACAGTGGTATTTCAGTCAACATTCAGGACCTGGCCCCATCCTGTGCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS TCA 72 bp | GCTTGTGGTATGACCCAGACACAGGGCAAAAATGCTTaGCAGACCAAGGCCCATGACCTGCATGAACTTACG | + |
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Preference number: 6 (lower is better) Translates to: ACGMTQTQGKNA*QTKAHDLHELT Trigger: CGTAAGTTCATGCAGGTCATGGGCCTTGGTCTGTCAAGCATTTTTGCCCTGTGTCTGGGTCATACCACAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS TCA 72 bp | ACCACTGTGGTTGAAGGTCTGGAAGCCAATGGAAGCTaGTGCAAAGATCATAGCCTTGAGGAAGCTTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: TTVVEGLEANGS*CKDHSLEEACG Trigger: ACCACAAGCTTCCTCAAGGCTATGATCTTTGCATCAGCTTCCATTGGCTTCCAGACCTTCAACCACAGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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| CDS TCA 72 bp | GATGCAAAGATCATAGCCTTGAGGAAGCTTGTGGTATaGCCCAGACACAGGGCAAAAATGCTTGACAGACCA | + |
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Preference number: 6 (lower is better) Translates to: DAKIIALRKLVV*PRHRAKMLDRP Trigger: TGGTCTGTCAAGCATTTTTGCCCTGTGTCTGGGTCATACCACAAGCTTCCTCAAGGCTATGATCTTTGCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094218.4 |
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