Pregenerated sensors for SLC17A7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070570Ensembl transcript IDs: ENSMUST00000085374.7, ENSMUST00000209634.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAGGAGTGGGGTTCCTCGACACTGCCGCTCAGGCTAGAGGTGTATaGAGTGGAAGTCCTGGAAACTGCCCCACAGTGGGAGGCCCGTGG | + |
|
Preference number: 1 (lower is better) Translates to: GGVGFLDTAAQARGV*SGSPGNCPTVGGPW Trigger: CCACGGGCCTCCCACTGTGGGGCAGTTTCCAGGACTTCCACTCCATACACCTCTAGCCTGAGCGGCAGTGTCGAGGAACCCCACTCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR GCA 90 bp | CAGGGCAGGATTTACGTCACAGAGACAGACACCAAGACACGACCCTaGCCCAGGAACAACCCTCTCCTCCCAGCCCCGCTCCCTTTCCTG | + |
|
Preference number: 1 (lower is better) Translates to: QGRIYVTETDTKTRP*PRNNPLLPAPLPFL Trigger: CAGGAAAGGGAGCGGGGCTGGGAGGAGAGGGTTGTTCCTGGGGCAGGGTCGTGTCTTGGTGTCTGTCTCTGTGACGTAAATCCTGCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR GCA 90 bp | AGGGAAAGAGGGCTGGTCGGACAGCACTGGGAACAAGGGAGGACTTaGATCTTAAGCCTGAGGCAGGGGAGGAGTGGGGTTCCTCGACAC | + |
|
Preference number: 1 (lower is better) Translates to: RERGLVGQHWEQGRT*ILSLRQGRSGVPRH Trigger: GTGTCGAGGAACCCCACTCCTCCCCTGCCTCAGGCTTAAGATGCAAGTCCTCCCTTGTTCCCAGTGCTGTCCGACCAGCCCTCTTTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR TCA 90 bp | ATTTGGAATCATTTAGCCCCTGAGGGACACACAACAAATGGCCACTaGGAAACCGAGGGCGGCCTGGAACCACCCAGGAGAATAAAGTGC | + |
|
Preference number: 1 (lower is better) Translates to: IWNHLAPEGHTTNGH*ETEGGLEPPRRIKC Trigger: GCACTTTATTCTCCTGGGTGGTTCCAGGCCGCCCTCGGTTTCTCAGTGGCCATTTGTTGTGTGTCCCTCAGGGGCTAAATGATTCCAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR-3UTR CCA 90 bp | GCGAGGGGGATCCTGAAACCACCACGGGGAGGAAGAGGTGGCCTCGAGCCGCTGCTGGTCGGACAGCACTaGGAACAAGGGAGGACTTGC | + |
|
Preference number: 2 (lower is better) Translates to: ARGILKPPRGGRGGLEPLLVGQH*EQGRTC Trigger: GCAAGTCCTCCCTTGTTCCCAGTGCTGTCCGACCAG...CAGCGGCTCGAGGCCACCTCTTCCTCCCCGTGGTGGTTTCAGGATCCCCCTCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR-3UTR CCA 90 bp | GCGAGGGGGATCCTGAAACCACCACGGGGAGGAAGAGGTGGCCTCGAGCCGCTGATGGAGTGGAAGTCCTaGAAACTGCCCCACAGTGGG | + |
|
Preference number: 2 (lower is better) Translates to: ARGILKPPRGGRGGLEPLMEWKS*KLPHSG Trigger: CCCACTGTGGGGCAGTTTCCAGGACTTCCACTCCAT...CAGCGGCTCGAGGCCACCTCTTCCTCCCCGTGGTGGTTTCAGGATCCCCCTCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR CAA 90 bp | GAGGGAAAGAGGGCTGGTCGGACAGCACTGGGAACAAGGGAGGACTaGCATCTTAAGCCTGAGGCAGGGGAGGAGTGGGGTTCCTCGACA | + |
|
Preference number: 2 (lower is better) Translates to: EGKRAGRTALGTRED*HLKPEAGEEWGSST Trigger: TGTCGAGGAACCCCACTCCTCCCCTGCCTCAGGCTTAAGATGCAAGTCCTCCCTTGTTCCCAGTGCTGTCCGACCAGCCCTCTTTCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR-3UTR GCA 90 bp | TGGCCACTGAGAAACCGAGGGCGGCCTGGAACCACCCAGGAGAATAAAGTGCAAGGAAGTCCTGGAAACTaGCCCACAGTGGGAGGCCCG | + |
|
Preference number: 2 (lower is better) Translates to: WPLRNRGRPGTTQENKVQGSPGN*PTVGGP Trigger: CGGGCCTCCCACTGTGGGGCAGTTTCCAGGACTTCC...TTGCACTTTATTCTCCTGGGTGGTTCCAGGCCGCCCTCGGTTTCTCAGTGGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR-3UTR CCA 90 bp | ATTTACGTCACAGAGACAGACACCAAGACACGACCCTGCCCCAGGAACAACCCTGAGGCAGGGGAGGAGTaGGGTTCCTCGACACTGCCG | + |
|
Preference number: 2 (lower is better) Translates to: IYVTETDTKTRPCPRNNPEAGEE*GSSTLP Trigger: CGGCAGTGTCGAGGAACCCCACTCCTCCCCTGCCTC...AGGGTTGTTCCTGGGGCAGGGTCGTGTCTTGGTGTCTGTCTCTGTGACGTAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR-3UTR TCA 90 bp | ATTTACGTCACAGAGACAGACACCAAGACACGACCCTGCCCCAGGAACAACCCTAATCTCGGGGTAGCCTaGGAATCCCTGGGGTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: IYVTETDTKTRPCPRNNPNLGVA*ESLGSW Trigger: CCAAGACCCCAGGGATTCTCAGGCTACCCCGAGATT...AGGGTTGTTCCTGGGGCAGGGTCGTGTCTTGGTGTCTGTCTCTGTGACGTAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR-3UTR TCA 90 bp | ACCACGGGGAGGAAGAGGTGGCCTCGAGCCGCTGAATTAATAGCTTTGGGCAGCCTGAGACCTGAAAACTaGGTCAGAAAAAGAGCACGG | + |
|
Preference number: 2 (lower is better) Translates to: TTGRKRWPRAAELIALGSLRPEN*VRKRAR Trigger: CCGTGCTCTTTTTCTGACTCAGTTTTCAGGTCTCAG...GCTGCCCAAAGCTATTAATTCAGCGGCTCGAGGCCACCTCTTCCTCCCCGTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR-3UTR CCA 90 bp | GACACACAACAAATGGCCACTGAGAAACCGAGGGCGGCCTGGAACCACCCAGGAACTTTCAGGGGAGTCTaGGTATCCTTGAAACTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: DTQQMATEKPRAAWNHPGTFRGV*VSLKLL Trigger: TAGCAGTTTCAAGGATACCCAGACTCCCCTGAAAGT...TCCTGGGTGGTTCCAGGCCGCCCTCGGTTTCTCAGTGGCCATTTGTTGTGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR-3UTR CCA 90 bp | ATTTACGTCACAGAGACAGACACCAAGACACGACCCTGCCCCAGGAACAACCCTCCCCGCTCCCTTTCCTaGGATTCTGTAACTTCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: IYVTETDTKTRPCPRNNPPRSLS*DSVTSL Trigger: GAGAGAAGTTACAGAATCCCAGGAAAGGGAGCGGGG...AGGGTTGTTCCTGGGGCAGGGTCGTGTCTTGGTGTCTGTCTCTGTGACGTAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR-3UTR TCA 90 bp | ATTTACGTCACAGAGACAGACACCAAGACACGACCCTGCCCCAGGAACAACCCTGACCATGAAGTCTTCTaGGTAGGGGACCACCTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: IYVTETDTKTRPCPRNNPDHEVF*VGDHLN Trigger: ATTCAGGTGGTCCCCTACTCAGAAGACTTCATGGTC...AGGGTTGTTCCTGGGGCAGGGTCGTGTCTTGGTGTCTGTCTCTGTGACGTAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR-3UTR TCA 90 bp | TGGCCACTGAGAAACCGAGGGCGGCCTGGAACCACCCAGGAGAATAAAGTGCAAAAGAGAGGAAGAGGTTaGACTGTCCCTCCAAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: WPLRNRGRPGTTQENKVQKRGRG*TVPPNK Trigger: TTTATTTGGAGGGACAGTTCAACCTCTTCCTCTCTT...TTGCACTTTATTCTCCTGGGTGGTTCCAGGCCGCCCTCGGTTTCTCAGTGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR-3UTR CAA 90 bp | GACACACAACAAATGGCCACTGAGAAACCGAGGGCGGCCTGGAACCACCCAGGACCCCGCAGGAGGCAGTaGAGAGGGAAAGAGGGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: DTQQMATEKPRAAWNHPGPRRRQ*RGKEGW Trigger: CCAGCCCTCTTTCCCTCTCAACTGCCTCCTGCGGGG...TCCTGGGTGGTTCCAGGCCGCCCTCGGTTTCTCAGTGGCCATTTGTTGTGTGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR CCA 72 bp | GGGTTCCTCGACACTGCCGCTCAGGCTAGAGGTGTATaGAGTGGAAGTCCTGGAAACTGCCCCACAGTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GFLDTAAQARGV*SGSPGNCPTVG Trigger: TCCCACTGTGGGGCAGTTTCCAGGACTTCCACTCCATACACCTCTAGCCTGAGCGGCAGTGTCGAGGAACCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR TCA 72 bp | CATTTAGCCCCTGAGGGACACACAACAAATGGCCACTaGGAAACCGAGGGCGGCCTGGAACCACCCAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: HLAPEGHTTNGH*ETEGGLEPPRR Trigger: TCTCCTGGGTGGTTCCAGGCCGCCCTCGGTTTCTCAGTGGCCATTTGTTGTGTGTCCCTCAGGGGCTAAATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR TCA 72 bp | AACCACCACGGGGAGGAAGAGGTGGCCTCGAGCCGCTaGATTAATAGCTTTGGGCAGCCACTACTGAGACCT | + |
|
Preference number: 3 (lower is better) Translates to: NHHGEEEVASSR*INSFGQPLLRP Trigger: AGGTCTCAGTAGTGGCTGCCCAAAGCTATTAATTCAGCGGCTCGAGGCCACCTCTTCCTCCCCGTGGTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR CCA 72 bp | GCAGTTGAGAGGGAAAGAGGGCTGGTCGGACAGCACTaGGAACAAGGGAGGACTTGCATCTTAAGCCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: AVERERGLVGQH*EQGRTCILSLR Trigger: CCTCAGGCTTAAGATGCAAGTCCTCCCTTGTTCCCAGTGCTGTCCGACCAGCCCTCTTTCCCTCTCAACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTCAGAAACGCTGGTGAGAATCAGTCCTGGGAACGGCGGCATTGGTGGTTAGGAGTCTGGGTATCCTaGAAACTGCTAGTGTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: SLRNAGENQSWERRHWWLGVWVS*KLLVCS Trigger: GCTGCACACTAGCAGTTTCAAGGATACCCAGACTCC...TAACCACCAATGCCGCCGTTCCCAGGACTGATTCTCACCAGCGTTTCTGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR CCA 72 bp | GGCAGAAACAAGCGGAGAACGACTTTCAGGGGAGTCTaGGTATCCTTGAAACTGCTAGTGTGCAGCTTCACC | + |
|
Preference number: 3 (lower is better) Translates to: GRNKRRTTFRGV*VSLKLLVCSFT Trigger: GGTGAAGCTGCACACTAGCAGTTTCAAGGATACCCAGACTCCCCTGAAAGTCGTTCTCCGCTTGTTTCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR TCA 72 bp | GCCTTGAAACTAATAGAGGACGACCATGAAGTCTTCTaGGTAGGGGACCACCTGAATAATCTCGGGGTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: ALKLIEDDHEVF*VGDHLNNLGVA Trigger: GGCTACCCCGAGATTATTCAGGTGGTCCCCTACTCAGAAGACTTCATGGTCGTCCTCTATTAGTTTCAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR TCA 72 bp | CGAGCCGCTGAATTAATAGCTTTGGGCAGCCACTACTaGGACCTGAAAACTGAGTCAGAAAAAGAGCACGGG | + |
|
Preference number: 3 (lower is better) Translates to: RAAELIALGSHY*DLKTESEKEHG Trigger: CCCGTGCTCTTTTTCTGACTCAGTTTTCAGGTCTCAGTAGTGGCTGCCCAAAGCTATTAATTCAGCGGCTCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTCAGAAACGCTGGTGAGAATCAGTCCTGGGAACGGCGGCATTGGTGGTTATGGAAAAATGTAGAATaGGTTAGGCGAGCCTTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SLRNAGENQSWERRHWWLWKNVE*VRRALK Trigger: TTTCAAGGCTCGCCTAACCAATTCTACATTTTTCCA...TAACCACCAATGCCGCCGTTCCCAGGACTGATTCTCACCAGCGTTTCTGAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR CCA 90 bp | ACCACGGGGAGGAAGAGGTGGCCTCGAGCCGCTGAATTAATAGCTTTGGGCAGCAGTGTGCGTGGTCACTaGCCGCCCGTCGGCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TTGRKRWPRAAELIALGSSVRGH*PPVGTQ Trigger: CTGAGTGCCGACGGGCGGCCAGTGACCACGCACACT...GCTGCCCAAAGCTATTAATTCAGCGGCTCGAGGCCACCTCTTCCTCCCCGTGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR GCA 90 bp | ACCACCACGGGGAGGAAGAGGTGGCCTCGAGCCGCTGAATTAATAGCTTTGGGCGTCTCCGCGCCTTCCTaGCGCTTCTCCAGTAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: TTTGRKRWPRAAELIALGVSAPS*RFSSNR Trigger: CCGGTTACTGGAGAAGCGGCAGGAAGGCGCGGAGAC...GCCCAAAGCTATTAATTCAGCGGCTCGAGGCCACCTCTTCCTCCCCGTGGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR GCA 90 bp | ACCACCACGGGGAGGAAGAGGTGGCCTCGAGCCGCTGAATTAATAGCTTTGGGCGGAGGCCAAAGCAGGTaGAGTCCACCACAGGCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: TTTGRKRWPRAAELIALGGGQSR*SPPQAG Trigger: ACCCGCCTGTGGTGGACTGCACCTGCTTTGGCCTCC...GCCCAAAGCTATTAATTCAGCGGCTCGAGGCCACCTCTTCCTCCCCGTGGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR CCA 90 bp | ACCACCACGGGGAGGAAGAGGTGGCCTCGAGCCGCTGAATTAATAGCTTTGGGCTTCTGCACCACCACGTaGCCCCCACGGTGGGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TTTGRKRWPRAAELIALGFCTTT*PPRWVV Trigger: CACAACCCACCGTGGGGGCCACGTGGTGGTGCAGAA...GCCCAAAGCTATTAATTCAGCGGCTCGAGGCCACCTCTTCCTCCCCGTGGTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR CCA 90 bp | TGGCCACTGAGAAACCGAGGGCGGCCTGGAACCACCCAGGAGAATAAAGTGCAAGCACTGTGCTGTGTGTaGCCCCGTAGGACGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: WPLRNRGRPGTTQENKVQALCCV*PRRTEA Trigger: CGCCTCCGTCCTACGGGGCCACACACAGCACAGTGC...TTGCACTTTATTCTCCTGGGTGGTTCCAGGCCGCCCTCGGTTTCTCAGTGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR TCA 90 bp | ACCACCACGGGGAGGAAGAGGTGGCCTCGAGCCGCTGAATTAATAGCTTTGGGCATGGTCATGACAAGGTaGGGCAGCGCCGACACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TTTGRKRWPRAAELIALGMVMTR*GSADTS Trigger: GCTGGTGTCGGCGCTGCCTCACCTTGTCATGACCAT...GCCCAAAGCTATTAATTCAGCGGCTCGAGGCCACCTCTTCCTCCCCGTGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR GCA 90 bp | AACAAGCGGAGAACGACTTTCAGGGGAGTCTGGGTATCCTTGAAACTGCTAGTGGGCGGGTCCCGAGTGTaGGTGGTCACTGGCCGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NKRRTTFRGVWVSLKLLVGGSRV*VVTGRP Trigger: CGGGCGGCCAGTGACCACGCACACTCGGGACCCGCC...CACTAGCAGTTTCAAGGATACCCAGACTCCCCTGAAAGTCGTTCTCCGCTTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR GCA 90 bp | ATTTACGTCACAGAGACAGACACCAAGACACGACCCTGCCCCAGGAACAACCCTGGGGGCCTCGGAGGCTaGACTGTGCTGTGTGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IYVTETDTKTRPCPRNNPGGLGG*TVLCVA Trigger: GGCCACACACAGCACAGTGCAGCCTCCGAGGCCCCC...AGGGTTGTTCCTGGGGCAGGGTCGTGTCTTGGTGTCTGTCTCTGTGACGTAAAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR TCA 90 bp | GACACACAACAAATGGCCACTGAGAAACCGAGGGCGGCCTGGAACCACCCAGGATCATTGCACCCACGATaGTGGGGCACACCATCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DTQQMATEKPRAAWNHPGSLHPR*WGTPSQ Trigger: CTGGGATGGTGTGCCCCATCATCGTGGGTGCAATGA...TCCTGGGTGGTTCCAGGCCGCCCTCGGTTTCTCAGTGGCCATTTGTTGTGTGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR GCA 90 bp | TCCCTCAGAAACGCTGGTGAGAATCAGTCCTGGGAACGGCGGCATTGGTGGTTAGCCACGCCCTTGGAGTaGGAGTATCCGACCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRNAGENQSWERRHWWLATPLE*EYPTTS Trigger: GCTGGTGGTCGGATACTCGCACTCCAAGGGCGTGGC...TAACCACCAATGCCGCCGTTCCCAGGACTGATTCTCACCAGCGTTTCTGAGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR GCA 90 bp | TCCCTCAGAAACGCTGGTGAGAATCAGTCCTGGGAACGGCGGCATTGGTGGTTATCGGAGGCTGCACTGTaGTGTGTGTGGCCCCGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLRNAGENQSWERRHWWLSEAAL*CVWPRR Trigger: CCTACGGGGCCACACACAGCACAGTGCAGCCTCCGA...TAACCACCAATGCCGCCGTTCCCAGGACTGATTCTCACCAGCGTTTCTGAGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR CCA 90 bp | ATTTACGTCACAGAGACAGACACCAAGACACGACCCTGCCCCAGGAACAACCCTCCCCAGCCAAGGGCATaGCAACCACCGCCCCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IYVTETDTKTRPCPRNNPPQPRA*QPPPQH Trigger: ATGCTGGGGCGGTGGTTGCCATGCCCTTGGCTGGGG...AGGGTTGTTCCTGGGGCAGGGTCGTGTCTTGGTGTCTGTCTCTGTGACGTAAAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR CCA 90 bp | GACACACAACAAATGGCCACTGAGAAACCGAGGGCGGCCTGGAACCACCCAGGAAGATGGCCACGCCCTTaGAGTGCGAGTATCCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: DTQQMATEKPRAAWNHPGRWPRP*SASIRP Trigger: TGGTCGGATACTCGCACTCCAAGGGCGTGGCCATCT...TCCTGGGTGGTTCCAGGCCGCCCTCGGTTTCTCAGTGGCCATTTGTTGTGTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR CCA 90 bp | ACCACGGGGAGGAAGAGGTGGCCTCGAGCCGCTGAATTAATAGCTTTGGGCAGCCCAGCCAGCTGGTCGTaGCCAACAAAGCCACACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TTGRKRWPRAAELIALGSPASWS*PTKPHF Trigger: GAAGTGTGGCTTTGTTGGCCACGACCAGCTGGCTGG...GCTGCCCAAAGCTATTAATTCAGCGGCTCGAGGCCACCTCTTCCTCCCCGTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR TCA 90 bp | ACCACCACGGGGAGGAAGAGGTGGCCTCGAGCCGCTGAATTAATAGCTTTGGGCCCAGCCCCACCTTGCTaGTCTCAAAGCCGAACACTT | + |
|
Preference number: 4 (lower is better) Translates to: TTTGRKRWPRAAELIALGPAPPC*SQSRTL Trigger: AAGTGTTCGGCTTTGAGATCAGCAAGGTGGGGCTGG...GCCCAAAGCTATTAATTCAGCGGCTCGAGGCCACCTCTTCCTCCCCGTGGTGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR TCA 90 bp | TGGCCACTGAGAAACCGAGGGCGGCCTGGAACCACCCAGGAGAATAAAGTGCAAGCACCAGGGAGGCTATaGGGAACACGTACTGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: WPLRNRGRPGTTQENKVQAPGRL*GTRTAT Trigger: AGTGGCAGTACGTGTTCCTCATAGCCTCCCTGGTGC...TTGCACTTTATTCTCCTGGGTGGTTCCAGGCCGCCCTCGGTTTCTCAGTGGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR TCA 90 bp | GACACACAACAAATGGCCACTGAGAAACCGAGGGCGGCCTGGAACCACCCAGGAAGACCCCATAGAAGATaGCACCGCCGTAGTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: DTQQMATEKPRAAWNHPGRPHRR*HRRSAP Trigger: TGGTGCACTACGGCGGTGTCATCTTCTATGGGGTCT...TCCTGGGTGGTTCCAGGCCGCCCTCGGTTTCTCAGTGGCCATTTGTTGTGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR GCA 90 bp | GACACACAACAAATGGCCACTGAGAAACCGAGGGCGGCCTGGAACCACCCAGGAATGAGGAACACGTACTaGCACTCCTCCCGCGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DTQQMATEKPRAAWNHPGMRNTY*HSSRVL Trigger: CAAGACGCGGGAGGAGTGGCAGTACGTGTTCCTCAT...TCCTGGGTGGTTCCAGGCCGCCCTCGGTTTCTCAGTGGCCATTTGTTGTGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR TCA 90 bp | ATTTACGTCACAGAGACAGACACCAAGACACGACCCTGCCCCAGGAACAACCCTGGCAAGCAGGGTATGTaGCCCCCTCCACCAATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: IYVTETDTKTRPCPRNNPGKQGM*PPPPIP Trigger: AGGGATTGGTGGAGGGGGTCACATACCCTGCTTGCC...AGGGTTGTTCCTGGGGCAGGGTCGTGTCTTGGTGTCTGTCTCTGTGACGTAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR GCA 90 bp | GACTTGAAACCGCCATTTTCCCTCAGAAACGCTGGTGAGAATCAGTCCTGGGAAGCTCCTCCTCAGAGATaGTGGGGTGCAGTGCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DLKPPFSLRNAGENQSWEAPPQR*WGAVPV Trigger: CACCGGCACTGCACCCCAGCATCTCTGAGGAGGAGC...TTCCCAGGACTGATTCTCACCAGCGTTTCTGAGGGAAAATGGCGGTTTCAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR CCA 90 bp | GACTTGAAACCGCCATTTTCCCTCAGAAACGCTGGTGAGAATCAGTCCTGGGAACCACCAGCAGCAGCGTaGCTTCCATCCCGAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: DLKPPFSLRNAGENQSWEPPAAA*LPSRNP Trigger: GGGGTTTCGGGATGGAAGCCACGCTGCTGCTGGTGG...TTCCCAGGACTGATTCTCACCAGCGTTTCTGAGGGAAAATGGCGGTTTCAAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR CCA 90 bp | ATTTACGTCACAGAGACAGACACCAAGACACGACCCTGCCCCAGGAACAACCCTTCACTGCCAGCCAGCTaGTCGTGGCCAACAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IYVTETDTKTRPCPRNNPSLPAS*SWPTKP Trigger: TGGCTTTGTTGGCCACGACCAGCTGGCTGGCAGTGA...AGGGTTGTTCCTGGGGCAGGGTCGTGTCTTGGTGTCTGTCTCTGTGACGTAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR TCA 90 bp | TCCCTCAGAAACGCTGGTGAGAATCAGTCCTGGGAACGGCGGCATTGGTGGTTAGGATCCTCACGAAGATaGCACAGCCATAGTGAACGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRNAGENQSWERRHWWLGSSRR*HSHSER Trigger: GCGTTCACTATGGCTGTGTCATCTTCGTGAGGATCC...TAACCACCAATGCCGCCGTTCCCAGGACTGATTCTCACCAGCGTTTCTGAGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR TCA 90 bp | ATTTACGTCACAGAGACAGACACCAAGACACGACCCTGCCCCAGGAACAACCCTCCCTCCACCAATCCCTaGAGGATCCTCACGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: IYVTETDTKTRPCPRNNPPSTNP*RILTKM Trigger: CATCTTCGTGAGGATCCTTCAGGGATTGGTGGAGGG...AGGGTTGTTCCTGGGGCAGGGTCGTGTCTTGGTGTCTGTCTCTGTGACGTAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR GCA 90 bp | TCCCTCAGAAACGCTGGTGAGAATCAGTCCTGGGAACGGCGGCATTGGTGGTTACTCCATCCTGAATACTaGACAAGGACCCCAGCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLRNAGENQSWERRHWWLLHPEY*TRTPAK Trigger: CTTGGCTGGGGTCCTTGTGCAGTATTCAGGATGGAG...TAACCACCAATGCCGCCGTTCCCAGGACTGATTCTCACCAGCGTTTCTGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR GCA 90 bp | ACCACGGGGAGGAAGAGGTGGCCTCGAGCCGCTGAATTAATAGCTTTGGGCAGCCATCCTCAATGTATTTaGGCTCCTCCTCAGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TTGRKRWPRAAELIALGSHPQCI*APPQRC Trigger: GCATCTCTGAGGAGGAGCGCAAATACATTGAGGATG...GCTGCCCAAAGCTATTAATTCAGCGGCTCGAGGCCACCTCTTCCTCCCCGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR GCA 90 bp | ATTTACGTCACAGAGACAGACACCAAGACACGACCCTGCCCCAGGAACAACCCTTTTCACTTTCGTCACTaGCAGCCAGCTGGTCGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: IYVTETDTKTRPCPRNNPFHFRH*QPAGRG Trigger: GCCACGACCAGCTGGCTGGCAGTGACGAAAGTGAAA...AGGGTTGTTCCTGGGGCAGGGTCGTGTCTTGGTGTCTGTCTCTGTGACGTAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR TCA 90 bp | GACTTGAAACCGCCATTTTCCCTCAGAAACGCTGGTGAGAATCAGTCCTGGGAAAGATGGCAAAGCCACTaGAGCCCACAGCCAGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: DLKPPFSLRNAGENQSWERWQSH*SPQPGP Trigger: TGGTCCTGGCTGTGGGCTTCAGTGGCTTTGCCATCT...TTCCCAGGACTGATTCTCACCAGCGTTTCTGAGGGAAAATGGCGGTTTCAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR CCA 90 bp | AACAAGCGGAGAACGACTTTCAGGGGAGTCTGGGTATCCTTGAAACTGCTAGTGGAGGCCGACAGTCTCTaGATCCCAGTTGAACTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NKRRTTFRGVWVSLKLLVEADSL*IPVELG Trigger: GCCCAGTTCAACTGGGATCCAGAGACTGTCGGCCTC...CACTAGCAGTTTCAAGGATACCCAGACTCCCCTGAAAGTCGTTCTCCGCTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR TCA 90 bp | GACTTGAAACCGCCATTTTCCCTCAGAAACGCTGGTGAGAATCAGTCCTGGGAAGACAGAACTCCATCCTaGATACTGCACAAGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: DLKPPFSLRNAGENQSWEDRTPS*ILHKDP Trigger: GGGGTCCTTGTGCAGTATTCAGGATGGAGTTCTGTC...TTCCCAGGACTGATTCTCACCAGCGTTTCTGAGGGAAAATGGCGGTTTCAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR GCA 90 bp | AACAAGCGGAGAACGACTTTCAGGGGAGTCTGGGTATCCTTGAAACTGCTAGTGCTTGTGCTTGGTCATTaGACCCACGATGATGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NKRRTTFRGVWVSLKLLVLVLGH*THDDGA Trigger: TGCCCCATCATCGTGGGTGCAATGACCAAGCACAAG...CACTAGCAGTTTCAAGGATACCCAGACTCCCCTGAAAGTCGTTCTCCGCTTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR CCA 90 bp | TGGCCACTGAGAAACCGAGGGCGGCCTGGAACCACCCAGGAGAATAAAGTGCAATTGGCTGCGAATTTTTaGCAGATAAATCCTCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WPLRNRGRPGTTQENKVQLAANF*QINPPG Trigger: TCCTGGAGGATTTATCTGCCAAAAATTCGCAGCCAA...TTGCACTTTATTCTCCTGGGTGGTTCCAGGCCGCCCTCGGTTTCTCAGTGGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR CCA 90 bp | GACTTGAAACCGCCATTTTCCCTCAGAAACGCTGGTGAGAATCAGTCCTGGGAATTGCTCCAGATGCCATaGCAAGCAGGGTATGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: DLKPPFSLRNAGENQSWELLQMP*QAGYVT Trigger: GGTCACATACCCTGCTTGCCATGGCATCTGGAGCAA...TTCCCAGGACTGATTCTCACCAGCGTTTCTGAGGGAAAATGGCGGTTTCAAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR TCA 90 bp | GACTTGAAACCGCCATTTTCCCTCAGAAACGCTGGTGAGAATCAGTCCTGGGAAAAAAGGAGCCATGTATaGGGCCGACAGTCTCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: DLKPPFSLRNAGENQSWEKRSHV*GRQSLD Trigger: ATCCAGAGACTGTCGGCCTCATACATGGCTCCTTTT...TTCCCAGGACTGATTCTCACCAGCGTTTCTGAGGGAAAATGGCGGTTTCAAGTC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR GCA 90 bp | TCCCTCAGAAACGCTGGTGAGAATCAGTCCTGGGAACGGCGGCATTGGTGGTTAAAAGACCCTGTTGGCTaGGAATTTTTGGCAGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLRNAGENQSWERRHWWLKDPVG*EFLADK Trigger: TTTATCTGCCAAAAATTCGCAGCCAACAGGGTCTTT...TAACCACCAATGCCGCCGTTCCCAGGACTGATTCTCACCAGCGTTTCTGAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS GCA 90 bp | ACTGGCCGCCCGTCGGCACTCAGCTCCAGTGTCTCCGCGCCTTCCTaGCGCTTCTCCAGTAACCGGTGCAGCCTCCCCAGGGCGCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TGRPSALSSSVSAPS*RFSSNRCSLPRARP Trigger: GGGGCGCGCCCTGGGGAGGCTGCACCGGTTACTGGAGAAGCGGCAGGAAGGCGCGGAGACACTGGAGCTGAGTGCCGACGGGCGGCCAGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS CCA 90 bp | GCAGGTGCAGTCCACCACAGGCGGGTCCCGAGTGTGCGTGGTCACTaGCCGCCCGTCGGCACTCAGCTCCAGTGTCTCCGCGCCTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGAVHHRRVPSVRGH*PPVGTQLQCLRAFL Trigger: CAGGAAGGCGCGGAGACACTGGAGCTGAGTGCCGACGGGCGGCCAGTGACCACGCACACTCGGGACCCGCCTGTGGTGGACTGCACCTGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS CCA 90 bp | GGCCAAAGCAGGTGCAGTCCACCACAGGCGGGTCCCGAGTGTGCGTaGTCACTGGCCGCCCGTCGGCACTCAGCTCCAGTGTCTCCGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GQSRCSPPQAGPECA*SLAARRHSAPVSPR Trigger: GCGCGGAGACACTGGAGCTGAGTGCCGACGGGCGGCCAGTGACCACGCACACTCGGGACCCGCCTGTGGTGGACTGCACCTGCTTTGGCC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS GCA 90 bp | GGGAGGCCAAAGCAGGTGCAGTCCACCACAGGCGGGTCCCGAGTGTaGGTGGTCACTGGCCGCCCGTCGGCACTCAGCTCCAGTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRPKQVQSTTGGSRV*VVTGRPSALSSSVS Trigger: GGAGACACTGGAGCTGAGTGCCGACGGGCGGCCAGTGACCACGCACACTCGGGACCCGCCTGTGGTGGACTGCACCTGCTTTGGCCTCCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS GCA 90 bp | GCGCCCCTGGGGGCTCAGCCTCGTCCTCCATTTCACTTTCGTCACTaGCAGCCAGCTGGTCGTGGCCAACAAAGCCACACTTCTCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: APLGAQPRPPFHFRH*QPAGRGQQSHTSPR Trigger: GCGAGGAGAAGTGTGGCTTTGTTGGCCACGACCAGCTGGCTGGCAGTGACGAAAGTGAAATGGAGGACGAGGCTGAGCCCCCAGGGGCGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS CCA 90 bp | CCCAAGTGTAGGGGTGACTGCCTCCTGTTTGTGGACAGACCTGTATaGGGTCTGCACCACCACGTGGCCCCCACGGTGGGTTGTGCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PKCRGDCLLFVDRPV*GLHHHVAPTVGCAV Trigger: AACAGCACAACCCACCGTGGGGGCCACGTGGTGGTGCAGACCCCATACAGGTCTGTCCACAAACAGGAGGCAGTCACCCCTACACTTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209634.2 |
||
| CDS TCA 90 bp | TCAGCGATCTGGCCTCCAATGGGTACGATGATGGTCATGACAAGGTaGGGCAGCGCCGACACCAGCCCCACCTTGCTGATCTCAAAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SAIWPPMGTMMVMTR*GSADTSPTLLISKP Trigger: CGGCTTTGAGATCAGCAAGGTGGGGCTGGTGTCGGCGCTGCCTCACCTTGTCATGACCATCATCGTACCCATTGGAGGCCAGATCGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS CCA 90 bp | GCCTCGTCCTCCATTTCACTTTCGTCACTGCCAGCCAGCTGGTCGTaGCCAACAAAGCCACACTTCTCCTCGCTCATCTCCTCCGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ASSSISLSSLPASWS*PTKPHFSSLISSGS Trigger: AGAGCCGGAGGAGATGAGCGAGGAGAAGTGTGGCTTTGTTGGCCACGACCAGCTGGCTGGCAGTGACGAAAGTGAAATGGAGGACGAGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS CCA 90 bp | GGCTCAGCCTCGTCCTCCATTTCACTTTCGTCACTGCCAGCCAGCTaGTCGTGGCCAACAAAGCCACACTTCTCCTCGCTCATCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GSASSSISLSSLPAS*SWPTKPHFSSLISS Trigger: GGAGGAGATGAGCGAGGAGAAGTGTGGCTTTGTTGGCCACGACCAGCTGGCTGGCAGTGACGAAAGTGAAATGGAGGACGAGGCTGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS-3UTR CAA 90 bp | GACACACAACAAATGGCCACTGAGAAACCGAGGGCGGCCTGGAACCACCCAGGACGGTGGGTTGTGCTGTaGTTGACCATGGACACGATG | + |
|
Preference number: 5 (lower is better) Translates to: DTQQMATEKPRAAWNHPGRWVVL*LTMDTM Trigger: CATCGTGTCCATGGTCAACAACAGCACAACCCACCG...TCCTGGGTGGTTCCAGGCCGCCCTCGGTTTCTCAGTGGCCATTTGTTGTGTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR CAA 90 bp | TCCCTCAGAAACGCTGGTGAGAATCAGTCCTGGGAACGGCGGCATTGGTGGTTAACAGGGTTCATGAGCTaGGCGCTCTCCCCGATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: SLRNAGENQSWERRHWWLTGFMS*ALSPMA Trigger: TGCCATCGGGGAGAGCGCCAAGCTCATGAACCCTGT...TAACCACCAATGCCGCCGTTCCCAGGACTGATTCTCACCAGCGTTTCTGAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS GCA 90 bp | TCTCCCCGATGGCATCCTCAATGTATTTGCGCTCCTCCTCAGAGATaGTGGGGTGCAGTGCCGGTGACTCATAGGAGACAAGCAACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPRWHPQCICAPPQR*WGAVPVTHRRQATR Trigger: TCTGGTTGCTTGTCTCCTATGAGTCACCGGCACTGCACCCCAGCATCTCTGAGGAGGAGCGCAAATACATTGAGGATGCCATCGGGGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS CCA 90 bp | CCCCGATGGCATCCTCAATGTATTTGCGCTCCTCCTCAGAGATGCTaGGGTGCAGTGCCGGTGACTCATAGGAGACAAGCAACCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: PRWHPQCICAPPQRC*GAVPVTHRRQATRT Trigger: TGTTCTGGTTGCTTGTCTCCTATGAGTCACCGGCACTGCACCCCAGCATCTCTGAGGAGGAGCGCAAATACATTGAGGATGCCATCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS-3UTR CAA 90 bp | ACCACGGGGAGGAAGAGGTGGCCTCGAGCCGCTGAATTAATAGCTTTGGGCAGCGCATCCTCAATGTATTaGCGCTCCTCCTCAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: TTGRKRWPRAAELIALGSASSMY*RSSSEM Trigger: CATCTCTGAGGAGGAGCGCAAATACATTGAGGATGC...GCTGCCCAAAGCTATTAATTCAGCGGCTCGAGGCCACCTCTTCCTCCCCGTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR CAA 90 bp | AACAAGCGGAGAACGACTTTCAGGGGAGTCTGGGTATCCTTGAAACTGCTAGTGGAGATGGCCACGCCCTaGGAGTGCGAGTATCCGACC | + |
|
Preference number: 5 (lower is better) Translates to: NKRRTTFRGVWVSLKLLVEMATP*ECEYPT Trigger: GGTCGGATACTCGCACTCCAAGGGCGTGGCCATCTC...CACTAGCAGTTTCAAGGATACCCAGACTCCCCTGAAAGTCGTTCTCCGCTTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR CAA 90 bp | CAAGCGGAGAACGACTTTCAGGGGAGTCTGGGTATCCTTGAAACTGCTAGTGTGCGCAAAAGGCTGTCGTaGCCAGCCGACTCCGTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: QAENDFQGSLGILETASVRKRLS*PADSVL Trigger: TAGAACGGAGTCGGCTGGCAACGACAGCCTTTTGCG...CACACTAGCAGTTTCAAGGATACCCAGACTCCCCTGAAAGTCGTTCTCCGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR CAA 90 bp | TGGCCACTGAGAAACCGAGGGCGGCCTGGAACCACCCAGGAGAATAAAGTGCAAGTTGGCTGCGAATTTTaGGCAGATAAATCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: WPLRNRGRPGTTQENKVQVGCEF*ADKSSR Trigger: CCTGGAGGATTTATCTGCCAAAAATTCGCAGCCAAC...TTGCACTTTATTCTCCTGGGTGGTTCCAGGCCGCCCTCGGTTTCTCAGTGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS-3UTR CAA 90 bp | AACAAGCGGAGAACGACTTTCAGGGGAGTCTGGGTATCCTTGAAACTGCTAGTGAAGGGAGGGGCCCATTaGCTCCAGATGCCATGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: NKRRTTFRGVWVSLKLLVKGGAH*LQMPWQ Trigger: TTGCCATGGCATCTGGAGCAAATGGGCCCCTCCCTT...CACTAGCAGTTTCAAGGATACCCAGACTCCCCTGAAAGTCGTTCTCCGCTTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS TCA 90 bp | AATGTATTTGCGCTCCTCCTCAGAGATGCTGGGGTGCAGTGCCGGTaGCTCATAGGAGACAAGCAACCAGAACAGGTACCAAAAGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: NVFALLLRDAGVQCR*LIGDKQPEQVPKDP Trigger: GGGATCTTTTGGTACCTGTTCTGGTTGCTTGTCTCCTATGAGTCACCGGCACTGCACCCCAGCATCTCTGAGGAGGAGCGCAAATACATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGCCATTTTGGCCATTTCCCTGGACAATGATTGTACTAAGCTAAGGTCATGGGTTGTGCTGTTGTaGACCATGGACACGATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRAILAISLDNDCTKLRSWVVLL*TMDTMA Trigger: GGCCATCGTGTCCATGGTCAACAACAGCACAACCCA...TGACCTTAGCTTAGTACAATCATTGTCCAGGGAAATGGCCAAAATGGCTCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085374.7 |
||
| CDS GCA 72 bp | GTCTCCGCGCCTTCCTGCCGCTTCTCCAGTAACCGGTaGAGCCTCCCCAGGGCGCGCCCCGCCAGCTTCCGA | + |
|
Preference number: 6 (lower is better) Translates to: VSAPSCRFSSNR*SLPRARPASFR Trigger: TCGGAAGCTGGCGGGGCGCGCCCTGGGGAGGCTGCACCGGTTACTGGAGAAGCGGCAGGAAGGCGCGGAGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS CCA 72 bp | GTCCACCACAGGCGGGTCCCGAGTGTGCGTGGTCACTaGCCGCCCGTCGGCACTCAGCTCCAGTGTCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VHHRRVPSVRGH*PPVGTQLQCLR Trigger: GCGGAGACACTGGAGCTGAGTGCCGACGGGCGGCCAGTGACCACGCACACTCGGGACCCGCCTGTGGTGGAC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS GCA 72 bp | AAGCAGGTGCAGTCCACCACAGGCGGGTCCCGAGTGTaGGTGGTCACTGGCCGCCCGTCGGCACTCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KQVQSTTGGSRV*VVTGRPSALSS Trigger: GGAGCTGAGTGCCGACGGGCGGCCAGTGACCACGCACACTCGGGACCCGCCTGTGGTGGACTGCACCTGCTT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS GCA 72 bp | CCGTCGGCACTCAGCTCCAGTGTCTCCGCGCCTTCCTaGCGCTTCTCCAGTAACCGGTGCAGCCTCCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PSALSSSVSAPS*RFSSNRCSLPR Trigger: CCTGGGGAGGCTGCACCGGTTACTGGAGAAGCGGCAGGAAGGCGCGGAGACACTGGAGCTGAGTGCCGACGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS CCA 72 bp | CCACAGCCAGGACCAGGAAGGAGATGGCCACGCCCTTaGAGTGCGAGTATCCGACCACCAGCAGCAGCGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PQPGPGRRWPRP*SASIRPPAAAW Trigger: CCACGCTGCTGCTGGTGGTCGGATACTCGCACTCCAAGGGCGTGGCCATCTCCTTCCTGGTCCTGGCTGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS CAA 72 bp | CCCACAGCCAGGACCAGGAAGGAGATGGCCACGCCCTaGGAGTGCGAGTATCCGACCACCAGCAGCAGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PTARTRKEMATP*ECEYPTTSSSV Trigger: CACGCTGCTGCTGGTGGTCGGATACTCGCACTCCAAGGGCGTGGCCATCTCCTTCCTGGTCCTGGCTGTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS GCA 72 bp | ACTGCCTCCTGTTTGTGGACAGACCTGTATGGGGTCTaGACCACCACGTGGCCCCCACGGTGGGTTGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: TASCLWTDLYGV*TTTWPPRWVVL Trigger: CAGCACAACCCACCGTGGGGGCCACGTGGTGGTGCAGACCCCATACAGGTCTGTCCACAAACAGGAGGCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000209634.2 |
||
| CDS GCA 72 bp | GCTTGGCGCTCTCCCCGATGGCATCCTCAATGTATTTaGGCTCCTCCTCAGAGATGCTGGGGTGCAGTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: AWRSPRWHPQCI*APPQRCWGAVP Trigger: CGGCACTGCACCCCAGCATCTCTGAGGAGGAGCGCAAATACATTGAGGATGCCATCGGGGAGAGCGCCAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS TCA 72 bp | TGGCCTCCAATGGGTACGATGATGGTCATGACAAGGTaGGGCAGCGCCGACACCAGCCCCACCTTGCTGATC | + |
|
Preference number: 6 (lower is better) Translates to: WPPMGTMMVMTR*GSADTSPTLLI Trigger: GATCAGCAAGGTGGGGCTGGTGTCGGCGCTGCCTCACCTTGTCATGACCATCATCGTACCCATTGGAGGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS GCA 72 bp | GTACTGCCACTCCTCCCGCGTCTTGTGCTTGGTCATTaGACCCACGATGATGGGGCACACCATCCCAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: VLPLLPRLVLGH*THDDGAHHPRQ Trigger: CTGTCTGGGATGGTGTGCCCCATCATCGTGGGTGCAATGACCAAGCACAAGACGCGGGAGGAGTGGCAGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS GCA 72 bp | GGGGCTCAGCCTCGTCCTCCATTTCACTTTCGTCACTaGCAGCCAGCTGGTCGTGGCCAACAAAGCCACACT | + |
|
Preference number: 6 (lower is better) Translates to: GAQPRPPFHFRH*QPAGRGQQSHT Trigger: AGTGTGGCTTTGTTGGCCACGACCAGCTGGCTGGCAGTGACGAAAGTGAAATGGAGGACGAGGCTGAGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS CAA 72 bp | AGCTTGGCGCTCTCCCCGATGGCATCCTCAATGTATTaGCGCTCCTCCTCAGAGATGCTGGGGTGCAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLALSPMASSMY*RSSSEMLGCSA Trigger: GGCACTGCACCCCAGCATCTCTGAGGAGGAGCGCAAATACATTGAGGATGCCATCGGGGAGAGCGCCAAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS CAA 90 bp | GGGTTCATGAGCTTGGCGCTCTCCCCGATGGCATCCTCAATGTATTaGCGCTCCTCCTCAGAGATGCTGGGGTGCAGTGCCGGTGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: GFMSLALSPMASSMY*RSSSEMLGCSAGDS Trigger: TGAGTCACCGGCACTGCACCCCAGCATCTCTGAGGAGGAGCGCAAATACATTGAGGATGCCATCGGGGAGAGCGCCAAGCTCATGAACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS TCA 72 bp | GCGCTCCTCCTCAGAGATGCTGGGGTGCAGTGCCGGTaGCTCATAGGAGACAAGCAACCAGAACAGGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: ALLLRDAGVQCR*LIGDKQPEQVP Trigger: TGGTACCTGTTCTGGTTGCTTGTCTCCTATGAGTCACCGGCACTGCACCCCAGCATCTCTGAGGAGGAGCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS CCA 72 bp | TCGTCCTCCATTTCACTTTCGTCACTGCCAGCCAGCTaGTCGTGGCCAACAAAGCCACACTTCTCCTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSISLSSLPAS*SWPTKPHFSSL Trigger: GAGCGAGGAGAAGTGTGGCTTTGTTGGCCACGACCAGCTGGCTGGCAGTGACGAAAGTGAAATGGAGGACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS CCA 72 bp | TCCATTTCACTTTCGTCACTGCCAGCCAGCTGGTCGTaGCCAACAAAGCCACACTTCTCCTCGCTCATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SISLSSLPASWS*PTKPHFSSLIS Trigger: GGAGATGAGCGAGGAGAAGTGTGGCTTTGTTGGCCACGACCAGCTGGCTGGCAGTGACGAAAGTGAAATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS CAA 90 bp | AAGCGCCTCCAGGGTGTGTTAAACTTCGTAACAGGGTTCATGAGCTaGGCGCTCTCCCCGATGGCATCCTCAATGTATTTGCGCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KRLQGVLNFVTGFMS*ALSPMASSMYLRSS Trigger: GGAGGAGCGCAAATACATTGAGGATGCCATCGGGGAGAGCGCCAAGCTCATGAACCCTGTTACGAAGTTTAACACACCCTGGAGGCGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS GCA 72 bp | TGGCATCCTCAATGTATTTGCGCTCCTCCTCAGAGATaGTGGGGTGCAGTGCCGGTGACTCATAGGAGACAA | + |
|
Preference number: 6 (lower is better) Translates to: WHPQCICAPPQR*WGAVPVTHRRQ Trigger: TTGTCTCCTATGAGTCACCGGCACTGCACCCCAGCATCTCTGAGGAGGAGCGCAAATACATTGAGGATGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS CCA 72 bp | CATCCTCAATGTATTTGCGCTCCTCCTCAGAGATGCTaGGGTGCAGTGCCGGTGACTCATAGGAGACAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: HPQCICAPPQRC*GAVPVTHRRQA Trigger: TGCTTGTCTCCTATGAGTCACCGGCACTGCACCCCAGCATCTCTGAGGAGGAGCGCAAATACATTGAGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS CAA 72 bp | CAGGGTGTGTTAAACTTCGTAACAGGGTTCATGAGCTaGGCGCTCTCCCCGATGGCATCCTCAATGTATTTG | + |
|
Preference number: 6 (lower is better) Translates to: QGVLNFVTGFMS*ALSPMASSMYL Trigger: CAAATACATTGAGGATGCCATCGGGGAGAGCGCCAAGCTCATGAACCCTGTTACGAAGTTTAACACACCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS GCA 72 bp | GGTAGCCACAATGGCAAAGCCAAAGACCCTGTTGGCTaGGAATTTTTGGCAGATAAATCCTCCAGGAATCTG | + |
|
Preference number: 6 (lower is better) Translates to: GSHNGKAKDPVG*EFLADKSSRNL Trigger: CAGATTCCTGGAGGATTTATCTGCCAAAAATTCGCAGCCAACAGGGTCTTTGGCTTTGCCATTGTGGCTACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||
| CDS CAA 72 bp | AATGGCAAAGCCAAAGACCCTGTTGGCTGCGAATTTTaGGCAGATAAATCCTCCAGGAATCTGAGTGACAAT | + |
|
Preference number: 6 (lower is better) Translates to: NGKAKDPVGCEF*ADKSSRNLSDN Trigger: ATTGTCACTCAGATTCCTGGAGGATTTATCTGCCAAAAATTCGCAGCCAACAGGGTCTTTGGCTTTGCCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000085374.7 ENSMUST00000209634.2 |
||