Pregenerated sensors for SLC17A6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030500Ensembl transcript IDs: ENSMUST00000032710.7, ENSMUST00000207945.2
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGGCTCTCATAAGACACCAGAAGCCAGAACATGTACCAGACCATaGCAAAGCTTCCATACACATAAAATACTGACGACCATCCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: QGSHKTPEARTCTRP*QSFHTHKILTTIQC Trigger: ACACTGGATGGTCGTCAGTATTTTATGTGTATGGAAGCTTTGGCATGGTCTGGTACATGTTCTGGCTTCTGGTGTCTTATGAGAGCCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR GCA 90 bp | CTCCTCTATGTACCTACGTTCTTCATCTGTAATGGTAGGATGCTTTaGAGGGCTCTCATAAGACACCAGAAGCCAGAACATGTACCAGAC | + |
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Preference number: 1 (lower is better) Translates to: LLYVPTFFICNGRML*RALIRHQKPEHVPD Trigger: GTCTGGTACATGTTCTGGCTTCTGGTGTCTTATGAGAGCCCTGCAAAGCATCCTACCATTACAGATGAAGAACGTAGGTACATAGAGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR TCA 90 bp | ATCACAAACGAAAGGACAAATGGCCTGAATGAAGACGGCATAACGTaGCAACTGCCACAGATTGCACTTGATGGGAATCTCATGGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: ITNERTNGLNEDGIT*QLPQIALDGNLMVC Trigger: ACAGACCATGAGATTCCCATCAAGTGCAATCTGTGGCAGTTGTCACGTTATGCCGTCTTCATTCAGGCCATTTGTCCTTTCGTTTGTGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| 3UTR TCA 90 bp | CCGTGGGAAGGACAGGGTGTGCATTGTCTTTTCCTACACTTAACATaGCTCACTGCAAACATTCTCTTAACAAATGGATCGGGTATAACA | + |
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Preference number: 1 (lower is better) Translates to: PWEGQGVHCLFLHLT*LTANILLTNGSGIT Trigger: TGTTATACCCGATCCATTTGTTAAGAGAATGTTTGCAGTGAGTCATGTTAAGTGTAGGAAAAGACAATGCACACCCTGTCCTTCCCACGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR GCA 90 bp | AGTGATAGGCATGTACCAACCATCTCAGCCAACTCATCGTTGGTTTaGCTTTCTCATTCATATTCTTCATTTCCATTCTGTCCTCAAGAC | + |
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Preference number: 1 (lower is better) Translates to: SDRHVPTISANSSLV*LSHSYSSFPFCPQD Trigger: GTCTTGAGGACAGAATGGAAATGAAGAATATGAATGAGAAAGGCAAACCAACGATGAGTTGGCTGAGATGGTTGGTACATGCCTATCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR CCA 90 bp | TCAGAACTTCATTTGTCCTTCCTACTTAAAAGTGTATGTGTGTGGTaGGGAGGAAACACTACCAAAAAGAGAACAGGAAAGCTACATCCC | + |
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Preference number: 1 (lower is better) Translates to: SELHLSFLLKSVCVW*GGNTTKKRTGKLHP Trigger: GGGATGTAGCTTTCCTGTTCTCTTTTTGGTAGTGTTTCCTCCCCACCACACACATACACTTTTAAGTAGGAAGGACAAATGAAGTTCTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR TCA 90 bp | ACCAGACAGATCAAATACCCAAAACTGACAGGTAAACACACCAGGTaGCATTTTGCAGTAAATTGGGATGTGCATTCTTATCAGCGCAAA | + |
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Preference number: 1 (lower is better) Translates to: TRQIKYPKLTGKHTR*HFAVNWDVHSYQRK Trigger: TTTGCGCTGATAAGAATGCACATCCCAATTTACTGCAAAATGTCACCTGGTGTGTTTACCTGTCAGTTTTGGGTATTTGATCTGTCTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| 3UTR GCA 90 bp | GCTACCACAAGCAACATGGGGATAATTTACACACAGGAGGTTTTATaGTTTGCACTTATTGCTTGGTACACAAATGTTGCAGTTCCTGTT | + |
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Preference number: 1 (lower is better) Translates to: ATTSNMGIIYTQEVL*FALIAWYTNVAVPV Trigger: AACAGGAACTGCAACATTTGTGTACCAAGCAATAAGTGCAAAGCATAAAACCTCCTGTGTGTAAATTATCCCCATGTTGCTTGTGGTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| 3UTR CCA 90 bp | AAAAGAGAACAGGAAAGCTACATCCCAGCTATAAGAGTGAATCTTTaGCTATGGGAAGGCTCTCACTCTTACCTTATTCTTTGTCATTGC | + |
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Preference number: 1 (lower is better) Translates to: KREQESYIPAIRVNL*LWEGSHSYLILCHC Trigger: GCAATGACAAAGAATAAGGTAAGAGTGAGAGCCTTCCCATAGCCAAAGATTCACTCTTATAGCTGGGATGTAGCTTTCCTGTTCTCTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR TCA 90 bp | AAGACAATAGTAGCCTTCCTCATAAAACTACCTCGGAATCTGAATTaGGGTCGACAAATAAAGCCGGGGAAAGCTGCTTATCTATGTTAT | + |
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Preference number: 1 (lower is better) Translates to: KTIVAFLIKLPRNLN*GRQIKPGKAAYLCY Trigger: ATAACATAGATAAGCAGCTTTCCCCGGCTTTATTTGTCGACCTCAATTCAGATTCCGAGGTAGTTTTATGAGGAAGGCTACTATTGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR CCA 90 bp | AGCTTGAGAAACAGCTTGCTTAATTATTGTGGAGGTGGATCATATTaGAGCTACTATAGAGATCTGTCCCTCAGAACTTCATTTGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: SLRNSLLNYCGGGSY*SYYRDLSLRTSFVL Trigger: AAGGACAAATGAAGTTCTGAGGGACAGATCTCTATAGTAGCTCCAATATGATCCACCTCCACAATAATTAAGCAAGCTGTTTCTCAAGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR GCA 90 bp | AGGACAGGGTGTGCATTGTCTTTTCCTACACTTAACATGACTCACTaGAAACATTCTCTTAACAAATGGATCGGGTATAACAAAGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: RTGCALSFPTLNMTH*KHSLNKWIGYNKER Trigger: TCTTTCTTTGTTATACCCGATCCATTTGTTAAGAGAATGTTTGCAGTGAGTCATGTTAAGTGTAGGAAAAGACAATGCACACCCTGTCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR TCA 90 bp | ACTGGCATATCTTGGAGCAATATCCAAGTGATTAACATTGAAACCTaGAATATACACAGAAGCTTTGGCTCAAGGCAACATAAACTTGTA | + |
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Preference number: 1 (lower is better) Translates to: TGISWSNIQVINIET*NIHRSFGSRQHKLV Trigger: TACAAGTTTATGTTGCCTTGAGCCAAAGCTTCTGTGTATATTTCAGGTTTCAATGTTAATCACTTGGATATTGCTCCAAGATATGCCAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR TCA 90 bp | GGTAGTGAATGGGGGAGCATGGAGCATACCCCTCCCTTTACAAGCTCTCATTCAGCCACAGATTGCACTTaGTGGGAATCTCATGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: GSEWGSMEHTPPFTSSHSATDCT*WESHGL Trigger: CAGACCATGAGATTCCCATCAAGTGCAATCTGTGGC...TGAATGAGAGCTTGTAAAGGGAGGGGTATGCTCCATGCTCCCCCATTCACTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| 3UTR-3UTR CCA 90 bp | TCACATTGTATATTTGCAGTAGCAGGGCCTCCAGTCAAGAGCACAGGACACCAGGTGAATGGGGGAGCATaGAGCATACCCCTCCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: SHCIFAVAGPPVKSTGHQVNGGA*SIPLPL Trigger: TAAAGGGAGGGGTATGCTCCATGCTCCCCCATTCAC...CTGGTGTCCTGTGCTCTTGACTGGAGGCCCTGCTACTGCAAATATACAATGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| 3UTR-3UTR TCA 90 bp | CAAGTCCCTGGTACAGAACTTCAGATCACACCATCCCAGAAGACACTGAGTACAAGACGGGCATGGATGTaGAAAACTTCCTCCATGGGG | + |
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Preference number: 2 (lower is better) Translates to: QVPGTELQITPSQKTLSTRRAWM*KTSSMG Trigger: CCCCATGGAGGAAGTTTTTCACATCCATGCCCGTCT...TGTACTCAGTGTCTTCTGGGATGGTGTGATCTGAAGTTCTGTACCAGGGACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR GCA 90 bp | AACAGTCAGCTTTTCACAATGGAGAATCAAGGACACCGTGGGAAGGACAGGGTGAGGAAATCTGCAATTTaGCCCCCGATAGGCACAATG | + |
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Preference number: 2 (lower is better) Translates to: NSQLFTMENQGHRGKDRVRKSAI*PPIGTM Trigger: CATTGTGCCTATCGGGGGGCAAATTGCAGATTTCCT...CACCCTGTCCTTCCCACGGTGTCCTTGATTCTCCATTGTGAAAAGCTGACTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGGGCCTCCAGTCAAGAGCACAGGACACCAGACAGATCAAATACCCAAAACCACAAACACTACAAATaGATCCAGCAACTAGCATCG | + |
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Preference number: 2 (lower is better) Translates to: SRASSQEHRTPDRSNTQNHKHYK*IQQLAS Trigger: CGATGCTAGTTGCTGGATTCATTTGTAGTGTTTGTG...GTTTTGGGTATTTGATCTGTCTGGTGTCCTGTGCTCTTGACTGGAGGCCCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| 3UTR-3UTR TCA 90 bp | ATGATAGGGCAAACCATCCCCGACAGCGTGCCAACGCCATTTGAAATGCCCATTCAGTGGGGAGAAAGGTaGACAGTAATAAAGCTAAGT | + |
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Preference number: 2 (lower is better) Translates to: MIGQTIPDSVPTPFEMPIQWGER*TVIKLS Trigger: ACTTAGCTTTATTACTGTTCACCTTTCTCCCCACTG...AATGGGCATTTCAAATGGCGTTGGCACGCTGTCGGGGATGGTTTGCCCTATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR GCA 90 bp | TGTATGTGTGTGGTGGGGAGGAAACACTACCAAAAAGAGAACAGGAAAGCTACAGCAGCGTGGCTTCCATaGCAAAACCCCCACAATTCA | + |
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Preference number: 2 (lower is better) Translates to: CMCVVGRKHYQKENRKATAAWLP*QNPHNS Trigger: TGAATTGTGGGGGTTTTGGCATGGAAGCCACGCTGC...TGTAGCTTTCCTGTTCTCTTTTTGGTAGTGTTTCCTCCCCACCACACACATACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR TCA 90 bp | ATGATAGGGCAAACCATCCCCGACAGCGTGCCAACGCCATTTGAAATGCCCATTACATGCCAACCTTGCTaGTTTCAAATCCAAAAACCT | + |
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Preference number: 2 (lower is better) Translates to: MIGQTIPDSVPTPFEMPITCQPC*FQIQKP Trigger: AGGTTTTTGGATTTGAAATCAGCAAGGTTGGCATGT...AATGGGCATTTCAAATGGCGTTGGCACGCTGTCGGGGATGGTTTGCCCTATCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR TCA 90 bp | AACAGTCAGCTTTTCACAATGGAGAATCAAGGACACCGTGGGAAGGACAGGGTGTCTCACTGTAGTTGTTaGGAGAATTTGCTTGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: NSQLFTMENQGHRGKDRVSHCSC*ENLLAP Trigger: AGGAGCAAGCAAATTCTCTCAACAACTACAGTGAGA...CACCCTGTCCTTCCCACGGTGTCCTTGATTCTCCATTGTGAAAAGCTGACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR GCA 90 bp | TCACATTGTATATTTGCAGTAGCAGGGCCTCCAGTCAAGAGCACAGGACACCAGCACCAGGTGACATTTTaGAGTAAATTGGGATGTGCA | + |
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Preference number: 2 (lower is better) Translates to: SHCIFAVAGPPVKSTGHQHQVTF*SKLGCA Trigger: TGCACATCCCAATTTACTGCAAAATGTCACCTGGTG...CTGGTGTCCTGTGCTCTTGACTGGAGGCCCTGCTACTGCAAATATACAATGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| 3UTR CAA 90 bp | GGCCCGAGTGATAGGCATGTACCAACCATCTCAGCCAACTCATCGTaGGTTTGCCTTTCTCATTCATATTCTTCATTTCCATTCTGTCCT | + |
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Preference number: 2 (lower is better) Translates to: GPSDRHVPTISANSS*VCLSHSYSSFPFCP Trigger: AGGACAGAATGGAAATGAAGAATATGAATGAGAAAGGCAAACCAACGATGAGTTGGCTGAGATGGTTGGTACATGCCTATCACTCGGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR TCA 90 bp | GGTAGTGAATGGGGGAGCATGGAGCATACCCCTCCCTTTACAAGCTCTCATTCAATTATAGTCAATACCTaGTCTAGCCATCTTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: GSEWGSMEHTPPFTSSHSIIVNT*SSHLSC Trigger: ACAGGAAAGATGGCTAGATCAGGTATTGACTATAAT...TGAATGAGAGCTTGTAAAGGGAGGGGTATGCTCCATGCTCCCCCATTCACTACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| 3UTR-3UTR TCA 90 bp | AACAGTCAGCTTTTCACAATGGAGAATCAAGGACACCGTGGGAAGGACAGGGTGATACACATAAAATACTaGCGACCATCCAGTGTACTG | + |
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Preference number: 2 (lower is better) Translates to: NSQLFTMENQGHRGKDRVIHIKY*RPSSVL Trigger: CAGTACACTGGATGGTCGTCAGTATTTTATGTGTAT...CACCCTGTCCTTCCCACGGTGTCCTTGATTCTCCATTGTGAAAAGCTGACTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR CCA 90 bp | TACAGAACTTCAGATCACACCATCCCAGAAGACACTGAGTACATACTATATGCTGAATCAAGGACACCGTaGGAAGGACAGGGTGTGCAT | + |
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Preference number: 2 (lower is better) Translates to: YRTSDHTIPEDTEYILYAESRTP*EGQGVH Trigger: ATGCACACCCTGTCCTTCCCACGGTGTCCTTGATTC...AGCATATAGTATGTACTCAGTGTCTTCTGGGATGGTGTGATCTGAAGTTCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR CAA 90 bp | TCACAATGGAGAATCAAGGACACCGTGGGAAGGACAGGGTGTGCATaGTCTTTTCCTACACTTAACATGACTCACTGCAAACATTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: SQWRIKDTVGRTGCA*SFPTLNMTHCKHSL Trigger: AAGAGAATGTTTGCAGTGAGTCATGTTAAGTGTAGGAAAAGACAATGCACACCCTGTCCTTCCCACGGTGTCCTTGATTCTCCATTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGGGCCTCCAGTCAAGAGCACAGGACACCAGACAGATCAAATACCCAAAACTTGATGGGAATCTCATaGTCTGTTTTGAATTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: SRASSQEHRTPDRSNTQNLMGIS*SVLNSD Trigger: ATCTGAATTCAAAACAGACCATGAGATTCCCATCAA...GTTTTGGGTATTTGATCTGTCTGGTGTCCTGTGCTCTTGACTGGAGGCCCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| 3UTR-3UTR CCA 90 bp | TGTATGTGTGTGGTGGGGAGGAAACACTACCAAAAAGAGAACAGGAAAGCTACAGTGAATCTTTGGCTATaGGAAGGCTCTCACTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: CMCVVGRKHYQKENRKATVNLWL*EGSHSY Trigger: GTAAGAGTGAGAGCCTTCCCATAGCCAAAGATTCAC...TGTAGCTTTCCTGTTCTCTTTTTGGTAGTGTTTCCTCCCCACCACACACATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR GCA 90 bp | TACAGAACTTCAGATCACACCATCCCAGAAGACACTGAGTACATACTATATGCTTTGCGCTCTCTCCAATaGTCTCCTCTATGTACCTAC | + |
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Preference number: 2 (lower is better) Translates to: YRTSDHTIPEDTEYILYALRSLQ*SPLCTY Trigger: GTAGGTACATAGAGGAGAGCATTGGAGAGAGCGCAA...AGCATATAGTATGTACTCAGTGTCTTCTGGGATGGTGTGATCTGAAGTTCTGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR GCA 90 bp | ACTACCAAAAAGAGAACAGGAAAGCTACATCCCAGCTATAAGAGTGAATCTTTGGACAAGGTGAGGGACTaGAGACAACATGCCAACCTT | + |
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Preference number: 2 (lower is better) Translates to: TTKKRTGKLHPSYKSESLDKVRD*RQHANL Trigger: AAGGTTGGCATGTTGTCTGCAGTCCCTCACCTTGTC...CAAAGATTCACTCTTATAGCTGGGATGTAGCTTTCCTGTTCTCTTTTTGGTAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR CCA 90 bp | AAAGTAGAAATTGCAATCCCCAAACCCAACATTAGGTGTATGCTTGTTTTTGGTCTGTCAGGTAGTGAATaGGGGAGCATGGAGCATACC | + |
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Preference number: 2 (lower is better) Translates to: KVEIAIPKPNIRCMLVFGLSGSE*GSMEHT Trigger: GGTATGCTCCATGCTCCCCCATTCACTACCTGACAG...ACCAAAAACAAGCATACACCTAATGTTGGGTTTGGGGATTGCAATTTCTACTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| 3UTR-3UTR CCA 90 bp | TCACATTGTATATTTGCAGTAGCAGGGCCTCCAGTCAAGAGCACAGGACACCAGCATTTTGCAGTAAATTaGGATGTGCATTCTTATCAG | + |
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Preference number: 2 (lower is better) Translates to: SHCIFAVAGPPVKSTGHQHFAVN*DVHSYQ Trigger: CTGATAAGAATGCACATCCCAATTTACTGCAAAATG...CTGGTGTCCTGTGCTCTTGACTGGAGGCCCTGCTACTGCAAATATACAATGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| 3UTR-3UTR TCA 90 bp | ACCACAAGCAACATGGGGATAATTTACACACAGGAGGTTTTATGCTTTGCACTTTGCTCTCTAAAATGGTaGTGGGTCCAACGAATACCT | + |
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Preference number: 2 (lower is better) Translates to: TTSNMGIIYTQEVLCFALCSLKW*WVQRIP Trigger: AGGTATTCGTTGGACCCATCACCATTTTAGAGAGCA...AAGTGCAAAGCATAAAACCTCCTGTGTGTAAATTATCCCCATGTTGCTTGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| 3UTR-3UTR GCA 90 bp | CTCCAGTCAAGAGCACAGGACACCAGACAGATCAAATACCCAAAACTGACAGGTTTGAACAGCAAGACTTaGTTGGTTGATATGTTTACA | + |
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Preference number: 2 (lower is better) Translates to: LQSRAQDTRQIKYPKLTGLNSKT*LVDMFT Trigger: TGTAAACATATCAACCAAGCAAGTCTTGCTGTTCAA...ACCTGTCAGTTTTGGGTATTTGATCTGTCTGGTGTCCTGTGCTCTTGACTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| 3UTR-3UTR GCA 90 bp | TACAGAACTTCAGATCACACCATCCCAGAAGACACTGAGTACATACTATATGCTAATGGTAGGATGCTTTaGAGGGCTCTCATAAGACAC | + |
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Preference number: 2 (lower is better) Translates to: YRTSDHTIPEDTEYILYANGRML*RALIRH Trigger: GTGTCTTATGAGAGCCCTGCAAAGCATCCTACCATT...AGCATATAGTATGTACTCAGTGTCTTCTGGGATGGTGTGATCTGAAGTTCTGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR CCA 90 bp | TACAGAACTTCAGATCACACCATCCCAGAAGACACTGAGTACATACTATATGCTGTCAGCTTTTCACAATaGAGAATCAAGGACACCGTG | + |
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Preference number: 2 (lower is better) Translates to: YRTSDHTIPEDTEYILYAVSFSQ*RIKDTV Trigger: CACGGTGTCCTTGATTCTCCATTGTGAAAAGCTGAC...AGCATATAGTATGTACTCAGTGTCTTCTGGGATGGTGTGATCTGAAGTTCTGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAAAAAGAGAACAGGAAAGCTACATCCCAGCTATAAGAGTGAATCTTTGGCTACATGTACCAGACCATaGCAAAGCTTCCATACACAT | + |
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Preference number: 2 (lower is better) Translates to: TKKRTGKLHPSYKSESLATCTRP*QSFHTH Trigger: ATGTGTATGGAAGCTTTGGCATGGTCTGGTACATGT...AGCCAAAGATTCACTCTTATAGCTGGGATGTAGCTTTCCTGTTCTCTTTTTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR CCA 90 bp | AAAAAGAGAACAGGAAAGCTACATCCCAGCTATAAGAGTGAATCTTTGGCTATGAGCTCCTGCAGAAGTTaGCAACAATTATCGCGTAGA | + |
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Preference number: 2 (lower is better) Translates to: KKRTGKLHPSYKSESLAMSSCRS*QQLSRR Trigger: TCTACGCGATAATTGTTGCCAACTTCTGCAGGAGCT...CATAGCCAAAGATTCACTCTTATAGCTGGGATGTAGCTTTCCTGTTCTCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR CAA 90 bp | AAAAAGAGAACAGGAAAGCTACATCCCAGCTATAAGAGTGAATCTTaGGCTATGGGAAGGCTCTCACTCTTACCTTATTCTTTGTCATTG | + |
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Preference number: 2 (lower is better) Translates to: KKRTGKLHPSYKSES*AMGRLSLLPYSLSL Trigger: CAATGACAAAGAATAAGGTAAGAGTGAGAGCCTTCCCATAGCCAAAGATTCACTCTTATAGCTGGGATGTAGCTTTCCTGTTCTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR GCA 90 bp | GAACTTCAGATCACACCATCCCAGAAGACACTGAGTACATACTATATGCTAAACAAAAAGTCCAGCTCCTaGAGAAGTTGGCAACAATTA | + |
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Preference number: 2 (lower is better) Translates to: ELQITPSQKTLSTYYMLNKKSSS*RSWQQL Trigger: TAATTGTTGCCAACTTCTGCAGGAGCTGGACTTTTT...GTTTAGCATATAGTATGTACTCAGTGTCTTCTGGGATGGTGTGATCTGAAGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR GCA 90 bp | CTATATGCTAAACAGTCAGCTTTTCACAATGGAGAATCAAGGACACCGTGGGAAGTTGTTGAGAGAATTTaGTTGCTCCTTAGGAAATCT | + |
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Preference number: 2 (lower is better) Translates to: LYAKQSAFHNGESRTPWEVVERI*LLLRKS Trigger: AGATTTCCTAAGGAGCAAGCAAATTCTCTCAACAAC...TTCCCACGGTGTCCTTGATTCTCCATTGTGAAAAGCTGACTGTTTAGCATATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAAAAAGAGAACAGGAAAGCTACATCCCAGCTATAAGAGTGAATCTTTGGCTGATACTGGCATATCTTaGAGCAATATCCAAGTGATT | + |
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Preference number: 2 (lower is better) Translates to: TKKRTGKLHPSYKSESLADTGIS*SNIQVI Trigger: AATCACTTGGATATTGCTCCAAGATATGCCAGTATC...AGCCAAAGATTCACTCTTATAGCTGGGATGTAGCTTTCCTGTTCTCTTTTTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCAACATGGGGATAATTTACACACAGGAGGTTTTATGCTTTGCACTTATTGCCAAGACTTGCTTGGTTaGTATGTTTACATGTTCACA | + |
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Preference number: 2 (lower is better) Translates to: KQHGDNLHTGGFMLCTYCQDLLG*YVYMFT Trigger: TGTGAACATGTAAACATATCAACCAAGCAAGTCTTG...GCAATAAGTGCAAAGCATAAAACCTCCTGTGTGTAAATTATCCCCATGTTGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| 3UTR CAA 90 bp | CAAAATATCACACACTGTGCACTCCTAGTAAGAGTTCAGTACAGTTaGCTAGCTACACAATATAGTTCTTCATTGAAAGATATAGCCACT | + |
|
Preference number: 2 (lower is better) Translates to: QNITHCALLVRVQYS*LATQYSSSLKDIAT Trigger: AGTGGCTATATCTTTCAATGAAGAACTATATTGTGTAGCTAGCAAACTGTACTGAACTCTTACTAGGAGTGCACAGTGTGTGATATTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| 3UTR-3UTR GCA 90 bp | AAAGTAGAAATTGCAATCCCCAAACCCAACATTAGGTGTATGCTTGTTTTTGGTAAATATCACACACTGTaGACTCCTAGTAAGAGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: KVEIAIPKPNIRCMLVFGKYHTL*TPSKSS Trigger: TGAACTCTTACTAGGAGTGCACAGTGTGTGATATTT...ACCAAAAACAAGCATACACCTAATGTTGGGTTTGGGGATTGCAATTTCTACTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| 3UTR CCA 72 bp | CAGTCAGCTTTTCACAATGGAGAATCAAGGACACCGTaGGAAGGACAGGGTGTGCATTGTCTTTTCCTACAC | + |
|
Preference number: 3 (lower is better) Translates to: QSAFHNGESRTP*EGQGVHCLFLH Trigger: GTGTAGGAAAAGACAATGCACACCCTGTCCTTCCCACGGTGTCCTTGATTCTCCATTGTGAAAAGCTGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAGTCAAGAGCACAGGACACCAGACAGATCAAATACCCAAAACTGACAGGTTGCCACAGATTGCACTaGATGGGAATCTCATGGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LQSRAQDTRQIKYPKLTGCHRLH*MGISWS Trigger: AGACCATGAGATTCCCATCAAGTGCAATCTGTGGCA...ACCTGTCAGTTTTGGGTATTTGATCTGTCTGGTGTCCTGTGCTCTTGACTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGGGCCTCCAGTCAAGAGCACAGGACACCAGACAGATCAAATACCCAAAACCTTTGCACTTATTGCTaGGTACACAAATGTTGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SRASSQEHRTPDRSNTQNLCTYC*VHKCCS Trigger: ACTGCAACATTTGTGTACCAAGCAATAAGTGCAAAG...GTTTTGGGTATTTGATCTGTCTGGTGTCCTGTGCTCTTGACTGGAGGCCCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| 3UTR TCA 72 bp | GAAAGGACAAATGGCCTGAATGAAGACGGCATAACGTaGCAACTGCCACAGATTGCACTTGATGGGAATCTC | + |
|
Preference number: 3 (lower is better) Translates to: ERTNGLNEDGIT*QLPQIALDGNL Trigger: GAGATTCCCATCAAGTGCAATCTGTGGCAGTTGTCACGTTATGCCGTCTTCATTCAGGCCATTTGTCCTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| 3UTR GCA 72 bp | GTACCTACGTTCTTCATCTGTAATGGTAGGATGCTTTaGAGGGCTCTCATAAGACACCAGAAGCCAGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: VPTFFICNGRML*RALIRHQKPEH Trigger: ATGTTCTGGCTTCTGGTGTCTTATGAGAGCCCTGCAAAGCATCCTACCATTACAGATGAAGAACGTAGGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| 3UTR GCA 72 bp | GAGAGAATTTGCTTGCTCCTTAGGAAATCTGCAATTTaGCCCCCGATAGGCACAATGATTGTCATGACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: ERICLLLRKSAI*PPIGTMIVMTR Trigger: CCTTGTCATGACAATCATTGTGCCTATCGGGGGGCAAATTGCAGATTTCCTAAGGAGCAAGCAAATTCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| 3UTR GCA 72 bp | AAACCATCCCCGACAGCGTGCCAACGCCATTTGAAATaGCCATTAAGATACTGGCATATCTTGGAGCAATAT | + |
|
Preference number: 3 (lower is better) Translates to: KPSPTACQRHLK*PLRYWHILEQY Trigger: ATATTGCTCCAAGATATGCCAGTATCTTAATGGGCATTTCAAATGGCGTTGGCACGCTGTCGGGGATGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCCAGTCAAGAGCACAGGACACCAGACAGATCAAATACCCAAAACTGACAGGTGCAAGACTTGCTTGGTaGATATGTTTACATGTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: LQSRAQDTRQIKYPKLTGARLAW*ICLHVH Trigger: GTGAACATGTAAACATATCAACCAAGCAAGTCTTGC...ACCTGTCAGTTTTGGGTATTTGATCTGTCTGGTGTCCTGTGCTCTTGACTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAAAAGAGAACAGGAAAGCTACATCCCAGCTATAAGAGTGAATCTTTGGCTTTGCACCTAGCAGATTaGCGCTCTCTCCAATGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: TKKRTGKLHPSYKSESLALHLAD*RSLQCS Trigger: AGAGCATTGGAGAGAGCGCAAATCTGCTAGGTGCAA...AGCCAAAGATTCACTCTTATAGCTGGGATGTAGCTTTCCTGTTCTCTTTTTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTATGTGTGTGGTGGGGAGGAAACACTACCAAAAAGAGAACAGGAAAGCTACAAGGACAGGGTGTGCATaGTCTTTTCCTACACTTAAC | + |
|
Preference number: 3 (lower is better) Translates to: CMCVVGRKHYQKENRKATRTGCA*SFPTLN Trigger: GTTAAGTGTAGGAAAAGACAATGCACACCCTGTCCT...TGTAGCTTTCCTGTTCTCTTTTTGGTAGTGTTTCCTCCCCACCACACACATACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| 3UTR TCA 72 bp | GTAGCCTTCCTCATAAAACTACCTCGGAATCTGAATTaGGGTCGACAAATAAAGCCGGGGAAAGCTGCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: VAFLIKLPRNLN*GRQIKPGKAAY Trigger: ATAAGCAGCTTTCCCCGGCTTTATTTGTCGACCTCAATTCAGATTCCGAGGTAGTTTTATGAGGAAGGCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| 3UTR GCA 72 bp | CATAAGACACCAGAAGCCAGAACATGTACCAGACCATaGCAAAGCTTCCATACACATAAAATACTGACGACC | + |
|
Preference number: 3 (lower is better) Translates to: HKTPEARTCTRP*QSFHTHKILTT Trigger: GGTCGTCAGTATTTTATGTGTATGGAAGCTTTGGCATGGTCTGGTACATGTTCTGGCTTCTGGTGTCTTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCAAAAAGAGAACAGGAAAGCTACATCCCAGCTATAAGAGTGAATCTTTGGCTGCGTGCCAACGCCATTaGAAATGCCCATTAAGATAC | + |
|
Preference number: 3 (lower is better) Translates to: TKKRTGKLHPSYKSESLAACQRH*KCPLRY Trigger: GTATCTTAATGGGCATTTCAAATGGCGTTGGCACGC...AGCCAAAGATTCACTCTTATAGCTGGGATGTAGCTTTCCTGTTCTCTTTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| 3UTR CCA 72 bp | CAGTTCACATCTCTTTACTCAGCACAGCAAAGGTTATaGTCACATGATAGTACTCTGAGACACAAAGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QFTSLYSAQQRL*SHDSTLRHKAE Trigger: CTCTGCTTTGTGTCTCAGAGTACTATCATGTGACCATAACCTTTGCTGTGCTGAGTAAAGAGATGTGAACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| 3UTR CCA 72 bp | CAGGAAAGCTACATCCCAGCTATAAGAGTGAATCTTTaGCTATGGGAAGGCTCTCACTCTTACCTTATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: QESYIPAIRVNL*LWEGSHSYLIL Trigger: AAGAATAAGGTAAGAGTGAGAGCCTTCCCATAGCCAAAGATTCACTCTTATAGCTGGGATGTAGCTTTCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| 3UTR TCA 72 bp | GGACAGGGTGTGCATTGTCTTTTCCTACACTTAACATaGCTCACTGCAAACATTCTCTTAACAAATGGATCG | + |
|
Preference number: 3 (lower is better) Translates to: GQGVHCLFLHLT*LTANILLTNGS Trigger: CGATCCATTTGTTAAGAGAATGTTTGCAGTGAGTCATGTTAAGTGTAGGAAAAGACAATGCACACCCTGTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| 3UTR CCA 72 bp | AGCTACATCCCAGCTATAAGAGTGAATCTTTGGCTATaGGAAGGCTCTCACTCTTACCTTATTCTTTGTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SYIPAIRVNLWL*EGSHSYLILCH Trigger: ATGACAAAGAATAAGGTAAGAGTGAGAGCCTTCCCATAGCCAAAGATTCACTCTTATAGCTGGGATGTAGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| 3UTR GCA 72 bp | CATGTACCAACCATCTCAGCCAACTCATCGTTGGTTTaGCTTTCTCATTCATATTCTTCATTTCCATTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: HVPTISANSSLV*LSHSYSSFPFC Trigger: ACAGAATGGAAATGAAGAATATGAATGAGAAAGGCAAACCAACGATGAGTTGGCTGAGATGGTTGGTACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| 3UTR CCA 72 bp | AACAGCTTGCTTAATTATTGTGGAGGTGGATCATATTaGAGCTACTATAGAGATCTGTCCCTCAGAACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: NSLLNYCGGGSY*SYYRDLSLRTS Trigger: TGAAGTTCTGAGGGACAGATCTCTATAGTAGCTCCAATATGATCCACCTCCACAATAATTAAGCAAGCTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| 3UTR GCA 72 bp | AGCAACATGGGGATAATTTACACACAGGAGGTTTTATaGTTTGCACTTATTGCTTGGTACACAAATGTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: SNMGIIYTQEVL*FALIAWYTNVA Trigger: TGCAACATTTGTGTACCAAGCAATAAGTGCAAAGCATAAAACCTCCTGTGTGTAAATTATCCCCATGTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| 3UTR TCA 72 bp | CTCCATGATAGACACATAATGATTATAGTCAATACCTaGTCTAGCCATCTTTCCTGTTCCACTATGTCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: LHDRHIMIIVNT*SSHLSCSTMSL Trigger: TAGAGACATAGTGGAACAGGAAAGATGGCTAGATCAGGTATTGACTATAATCATTATGTGTCTATCATGGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| 3UTR TCA 72 bp | ATCAAATACCCAAAACTGACAGGTAAACACACCAGGTaGCATTTTGCAGTAAATTGGGATGTGCATTCTTAT | + |
|
Preference number: 3 (lower is better) Translates to: IKYPKLTGKHTR*HFAVNWDVHSY Trigger: ATAAGAATGCACATCCCAATTTACTGCAAAATGTCACCTGGTGTGTTTACCTGTCAGTTTTGGGTATTTGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| 3UTR TCA 72 bp | TCTTGGAGCAATATCCAAGTGATTAACATTGAAACCTaGAATATACACAGAAGCTTTGGCTCAAGGCAACAT | + |
|
Preference number: 3 (lower is better) Translates to: SWSNIQVINIET*NIHRSFGSRQH Trigger: ATGTTGCCTTGAGCCAAAGCTTCTGTGTATATTTCAGGTTTCAATGTTAATCACTTGGATATTGCTCCAAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| 3UTR GCA 72 bp | TGTGCATTGTCTTTTCCTACACTTAACATGACTCACTaGAAACATTCTCTTAACAAATGGATCGGGTATAAC | + |
|
Preference number: 3 (lower is better) Translates to: CALSFPTLNMTH*KHSLNKWIGYN Trigger: GTTATACCCGATCCATTTGTTAAGAGAATGTTTGCAGTGAGTCATGTTAAGTGTAGGAAAAGACAATGCACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| 3UTR CCA 72 bp | CTTAACATGACTCACTGCAAACATTCTCTTAACAAATaGATCGGGTATAACAAAGAAAGAAAAGGTCAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LNMTHCKHSLNK*IGYNKERKGQW Trigger: CCACTGACCTTTTCTTTCTTTGTTATACCCGATCCATTTGTTAAGAGAATGTTTGCAGTGAGTCATGTTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| CDS-3UTR CCA 90 bp | ATGATAGGGCAAACCATCCCCGACAGCGTGCCAACGCCATTTGAAATGCCCATTCCTCTGTCAGCTCGATaGTCTCTCGGTTGTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MIGQTIPDSVPTPFEMPIPLSAR*SLGCPA Trigger: AGCAGGACAACCGAGAGACCATCGAGCTGACAGAGG...AATGGGCATTTCAAATGGCGTTGGCACGCTGTCGGGGATGGTTTGCCCTATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| CDS-3UTR CCA 90 bp | GGTAGTGAATGGGGGAGCATGGAGCATACCCCTCCCTTTACAAGCTCTCATTCACAGAAGAACGATCCGTaGATCATCCCCACGGTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GSEWGSMEHTPPFTSSHSQKNDP*IIPTVS Trigger: CGAGACCGTGGGGATGATCCACGGATCGTTCTTCTG...TGAATGAGAGCTTGTAAAGGGAGGGGTATGCTCCATGCTCCCCCATTCACTACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR GCA 90 bp | TCACATTGTATATTTGCAGTAGCAGGGCCTCCAGTCAAGAGCACAGGACACCAGGTCTCTCGGTTGTCCTaGTTCTTCTCCAGCACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHCIFAVAGPPVKSTGHQVSRLS*FFSSTL Trigger: CAGGGTGCTGGAGAAGAAGCAGGACAACCGAGAGAC...CTGGTGTCCTGTGCTCTTGACTGGAGGCCCTGCTACTGCAAATATACAATGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR TCA 90 bp | TCACATTGTATATTTGCAGTAGCAGGGCCTCCAGTCAAGAGCACAGGACACCAGAGACGGGCATGGATGTaGAAAACTTCCTCCATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHCIFAVAGPPVKSTGHQRRAWM*KTSSMG Trigger: CCCCATGGAGGAAGTTTTTCACATCCATGCCCGTCT...CTGGTGTCCTGTGCTCTTGACTGGAGGCCCTGCTACTGCAAATATACAATGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR GCA 90 bp | CAGTCCAGTGTAATAAATAAGTGCAGTTTGCATGATCCAGTAGCTTTGGCTTCCGCAGGCCGAAGCACGTaGAGTCGCATAGCGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSSVINKCSLHDPVALASAGRST*SRIAEP Trigger: AGGCTCCGCTATGCGACTGCACGTGCTTCGGCCTGC...GGAAGCCAAAGCTACTGGATCATGCAAACTGCACTTATTTATTACACTGGACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR GCA 90 bp | CTATATGCTAAACAGTCAGCTTTTCACAATGGAGAATCAAGGACACCGTGGGAAGCAGGCCGAAGCACGTaGAGTCGCATAGCGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LYAKQSAFHNGESRTPWEAGRST*SRIAEP Trigger: AGGCTCCGCTATGCGACTGCACGTGCTTCGGCCTGC...TTCCCACGGTGTCCTTGATTCTCCATTGTGAAAAGCTGACTGTTTAGCATATAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| CDS-3UTR GCA 90 bp | AGCAGGGCCTCCAGTCAAGAGCACAGGACACCAGACAGATCAAATACCCAAAACGACAAGGTGAGGGACTaGAGACAACATGCCAACCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRASSQEHRTPDRSNTQNDKVRD*RQHANL Trigger: AAGGTTGGCATGTTGTCTGCAGTCCCTCACCTTGTC...GTTTTGGGTATTTGATCTGTCTGGTGTCCTGTGCTCTTGACTGGAGGCCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR GCA 90 bp | AACAGTCAGCTTTTCACAATGGAGAATCAAGGACACCGTGGGAAGGACAGGGTGGGGCATTGCAATGACTaGTCCAGCATAGGAACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NSQLFTMENQGHRGKDRVGHCND*SSIGTS Trigger: GGAGGTTCCTATGCTGGAGCAGTCATTGCAATGCCC...CACCCTGTCCTTCCCACGGTGTCCTTGATTCTCCATTGTGAAAAGCTGACTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| CDS-3UTR CCA 90 bp | ATGATAGGGCAAACCATCCCCGACAGCGTGCCAACGCCATTTGAAATGCCCATTCACTCTGGCTGCAGATaGGATCAGCATATTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: MIGQTIPDSVPTPFEMPIHSGCR*DQHIEG Trigger: ACCCTCAATATGCTGATCCCATCTGCAGCCAGAGTG...AATGGGCATTTCAAATGGCGTTGGCACGCTGTCGGGGATGGTTTGCCCTATCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| CDS-3UTR GCA 90 bp | CTCCAGTCAAGAGCACAGGACACCAGACAGATCAAATACCCAAAACTGACAGGTTTGCGCTCTCTCCAATaGTCTCCTCTATGTACCTAC | + |
|
Preference number: 4 (lower is better) Translates to: LQSRAQDTRQIKYPKLTGLRSLQ*SPLCTY Trigger: GTAGGTACATAGAGGAGAGCATTGGAGAGAGCGCAA...ACCTGTCAGTTTTGGGTATTTGATCTGTCTGGTGTCCTGTGCTCTTGACTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR GCA 90 bp | TCACATTGTATATTTGCAGTAGCAGGGCCTCCAGTCAAGAGCACAGGACACCAGACCATAGTGGACGAGTaGAGCAATGAGGAAGACATA | + |
|
Preference number: 4 (lower is better) Translates to: SHCIFAVAGPPVKSTGHQTIVDE*SNEEDI Trigger: TATGTCTTCCTCATTGCTGCACTCGTCCACTATGGT...CTGGTGTCCTGTGCTCTTGACTGGAGGCCCTGCTACTGCAAATATACAATGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR TCA 90 bp | GGTAGTGAATGGGGGAGCATGGAGCATACCCCTCCCTTTACAAGCTCTCATTCAACATGCCAACCTTGCTaGTTTCAAATCCAAAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: GSEWGSMEHTPPFTSSHSTCQPC*FQIQKP Trigger: AGGTTTTTGGATTTGAAATCAGCAAGGTTGGCATGT...TGAATGAGAGCTTGTAAAGGGAGGGGTATGCTCCATGCTCCCCCATTCACTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR GCA 90 bp | GCTATAAGAGTGAATCTTTGGCTATGGGAAGGCTCTCACTCTTACCTTATTCTTGTCTCTCGGTTGTCCTaGTTCTTCTCCAGCACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: AIRVNLWLWEGSHSYLILVSRLS*FFSSTL Trigger: CAGGGTGCTGGAGAAGAAGCAGGACAACCGAGAGAC...AAGAATAAGGTAAGAGTGAGAGCCTTCCCATAGCCAAAGATTCACTCTTATAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| CDS-3UTR GCA 90 bp | AAGCAACATGGGGATAATTTACACACAGGAGGTTTTATGCTTTGCACTTATTGCAGGGAGGGGCCCACTTaGTCCATATCCCATGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KQHGDNLHTGGFMLCTYCREGPT*SISHDR Trigger: CCTGTCATGGGATATGGAGCAAGTGGGCCCCTCCCT...GCAATAAGTGCAAAGCATAAAACCTCCTGTGTGTAAATTATCCCCATGTTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR GCA 90 bp | CTCCAGTCAAGAGCACAGGACACCAGACAGATCAAATACCCAAAACTGACAGGTAATGGTAGGATGCTTTaGAGGGCTCTCATAAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: LQSRAQDTRQIKYPKLTGNGRML*RALIRH Trigger: GTGTCTTATGAGAGCCCTGCAAAGCATCCTACCATT...ACCTGTCAGTTTTGGGTATTTGATCTGTCTGGTGTCCTGTGCTCTTGACTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR GCA 90 bp | AGCAGGGCCTCCAGTCAAGAGCACAGGACACCAGACAGATCAAATACCCAAAACTCTTGCGCACCTTCTTaGACAAATTCTTCCTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SRASSQEHRTPDRSNTQNSCAPS*TNSSFF Trigger: GAAAAAGGAAGAATTTGTGCAAGAAGGTGCGCAAGA...GTTTTGGGTATTTGATCTGTCTGGTGTCCTGTGCTCTTGACTGGAGGCCCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR GCA 90 bp | CTCCAGTCAAGAGCACAGGACACCAGACAGATCAAATACCCAAAACTGACAGGTATAATGCACTCTGGCTaGAGATGGGATCAGCATATT | + |
|
Preference number: 4 (lower is better) Translates to: LQSRAQDTRQIKYPKLTGIMHSG*RWDQHI Trigger: AATATGCTGATCCCATCTGCAGCCAGAGTGCATTAT...ACCTGTCAGTTTTGGGTATTTGATCTGTCTGGTGTCCTGTGCTCTTGACTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR GCA 90 bp | ACCACAAGCAACATGGGGATAATTTACACACAGGAGGTTTTATGCTTTGCACTTGCAGCGTGGCTTCCATaGCAAAACCCCCACAATTCA | + |
|
Preference number: 4 (lower is better) Translates to: TTSNMGIIYTQEVLCFALAAWLP*QNPHNS Trigger: TGAATTGTGGGGGTTTTGGCATGGAAGCCACGCTGC...AAGTGCAAAGCATAAAACCTCCTGTGTGTAAATTATCCCCATGTTGCTTGTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR CCA 90 bp | AAGCAACATGGGGATAATTTACACACAGGAGGTTTTATGCTTTGCACTTATTGCCCTCTGTCAGCTCGATaGTCTCTCGGTTGTCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQHGDNLHTGGFMLCTYCPLSAR*SLGCPA Trigger: AGCAGGACAACCGAGAGACCATCGAGCTGACAGAGG...GCAATAAGTGCAAAGCATAAAACCTCCTGTGTGTAAATTATCCCCATGTTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR CCA 90 bp | ACCAAAAAGAGAACAGGAAAGCTACATCCCAGCTATAAGAGTGAATCTTTGGCTACTTTGCCTCCGCGGTaGATAGTGCTGTTGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: TKKRTGKLHPSYKSESLATLPPR*IVLLLT Trigger: GGTCAACAACAGCACTATCCACCGCGGAGGCAAAGT...AGCCAAAGATTCACTCTTATAGCTGGGATGTAGCTTTCCTGTTCTCTTTTTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| 3UTR CAA 72 bp | AGAATCAAGGACACCGTGGGAAGGACAGGGTGTGCATaGTCTTTTCCTACACTTAACATGACTCACTGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RIKDTVGRTGCA*SFPTLNMTHCK Trigger: TTTGCAGTGAGTCATGTTAAGTGTAGGAAAAGACAATGCACACCCTGTCCTTCCCACGGTGTCCTTGATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| CDS-3UTR TCA 90 bp | ACCACAAGCAACATGGGGATAATTTACACACAGGAGGTTTTATGCTTTGCACTTGCCTCCATTCTCCTGTaGGGTAGCACCGTAAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: TTSNMGIIYTQEVLCFALASILL*GSTVRF Trigger: AAATCTTACGGTGCTACCTCACAGGAGAATGGAGGC...AAGTGCAAAGCATAAAACCTCCTGTGTGTAAATTATCCCCATGTTGCTTGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS-3UTR GCA 90 bp | CAGTCCAGTGTAATAAATAAGTGCAGTTTGCATGATCCAGTAGCTTTGGCTTCCAGGAAATCTGCAATTTaGCCCCCGATAGGCACAATG | + |
|
Preference number: 4 (lower is better) Translates to: QSSVINKCSLHDPVALASRKSAI*PPIGTM Trigger: CATTGTGCCTATCGGGGGGCAAATTGCAGATTTCCT...GGAAGCCAAAGCTACTGGATCATGCAAACTGCACTTATTTATTACACTGGACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR CCA 90 bp | AAGCAACATGGGGATAATTTACACACAGGAGGTTTTATGCTTTGCACTTATTGCACTTTGCCTCCGCGGTaGATAGTGCTGTTGTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: KQHGDNLHTGGFMLCTYCTLPPR*IVLLLT Trigger: GGTCAACAACAGCACTATCCACCGCGGAGGCAAAGT...GCAATAAGTGCAAAGCATAAAACCTCCTGTGTGTAAATTATCCCCATGTTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR CCA 90 bp | CAAGTCCCTGGTACAGAACTTCAGATCACACCATCCCAGAAGACACTGAGTACATGCGATATATCCTCCTaGAATCTGGGTGATGATATA | + |
|
Preference number: 4 (lower is better) Translates to: QVPGTELQITPSQKTLSTCDISS*NLGDDI Trigger: TATATCATCACCCAGATTCCAGGAGGATATATCGCA...TGTACTCAGTGTCTTCTGGGATGGTGTGATCTGAAGTTCTGTACCAGGGACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| CDS-3UTR CCA 90 bp | GATGTGCATTCTTATCAGCGCAAAACATTAGAAAGAGCTCTGAGGTTAACTTTTTATCCCATGACAGGCTaGGTAGGTGACACCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DVHSYQRKTLERALRLTFYPMTG*VGDTLH Trigger: GTGGAGGGTGTCACCTACCCAGCCTGTCATGGGATA...AAAAGTTAACCTCAGAGCTCTTTCTAATGTTTTGCGCTGATAAGAATGCACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS-3UTR CCA 90 bp | AAGCAACATGGGGATAATTTACACACAGGAGGTTTTATGCTTTGCACTTATTGCCACTCTGGCTGCAGATaGGATCAGCATATTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KQHGDNLHTGGFMLCTYCHSGCR*DQHIEG Trigger: ACCCTCAATATGCTGATCCCATCTGCAGCCAGAGTG...GCAATAAGTGCAAAGCATAAAACCTCCTGTGTGTAAATTATCCCCATGTTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| 3UTR CAA 72 bp | ACAGGAAAGCTACATCCCAGCTATAAGAGTGAATCTTaGGCTATGGGAAGGCTCTCACTCTTACCTTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: TGKLHPSYKSES*AMGRLSLLPYS Trigger: AGAATAAGGTAAGAGTGAGAGCCTTCCCATAGCCAAAGATTCACTCTTATAGCTGGGATGTAGCTTTCCTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| CDS-3UTR TCA 90 bp | GATGTGCATTCTTATCAGCGCAAAACATTAGAAAGAGCTCTGAGGTTAACTTTTGGACGAGTGCAGCAATaGGGAAGACATACTGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: DVHSYQRKTLERALRLTFGRVQQ*GRHTAI Trigger: AATGGCAGTATGTCTTCCTCATTGCTGCACTCGTCC...AAAAGTTAACCTCAGAGCTCTTTCTAATGTTTTGCGCTGATAAGAATGCACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR GCA 90 bp | GATGTGCATTCTTATCAGCGCAAAACATTAGAAAGAGCTCTGAGGTTAACTTTTGGGCATTGCAATGACTaGTCCAGCATAGGAACCACA | + |
|
Preference number: 4 (lower is better) Translates to: DVHSYQRKTLERALRLTFGHCND*SSIGTT Trigger: TGTGGTTCCTATGCTGGAGCAGTCATTGCAATGCCC...AAAAGTTAACCTCAGAGCTCTTTCTAATGTTTTGCGCTGATAAGAATGCACATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR GCA 90 bp | CAGTCCAGTGTAATAAATAAGTGCAGTTTGCATGATCCAGTAGCTTTGGCTTCCACATGTACCAGACCATaGCAAAGCTTCCATACACAT | + |
|
Preference number: 4 (lower is better) Translates to: QSSVINKCSLHDPVALASTCTRP*QSFHTH Trigger: ATGTGTATGGAAGCTTTGGCATGGTCTGGTACATGT...GGAAGCCAAAGCTACTGGATCATGCAAACTGCACTTATTTATTACACTGGACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR GCA 90 bp | ACCACAAGCAACATGGGGATAATTTACACACAGGAGGTTTTATGCTTTGCACTTTCCACTGAATCCTACTaGAAGCACCAAGAAGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TTSNMGIIYTQEVLCFALSTESY*KHQEGD Trigger: ATCTCCTTCTTGGTGCTTGCAGTAGGATTCAGTGGA...AAGTGCAAAGCATAAAACCTCCTGTGTGTAAATTATCCCCATGTTGCTTGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| 3UTR CAA 72 bp | GATAGGCATGTACCAACCATCTCAGCCAACTCATCGTaGGTTTGCCTTTCTCATTCATATTCTTCATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DRHVPTISANSS*VCLSHSYSSFP Trigger: TGGAAATGAAGAATATGAATGAGAAAGGCAAACCAACGATGAGTTGGCTGAGATGGTTGGTACATGCCTATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| CDS-3UTR TCA 90 bp | ACCACAAGCAACATGGGGATAATTTACACACAGGAGGTTTTATGCTTTGCACTTTCTCACTGTAGTTGTTaGGAGAATTTGCTTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTSNMGIIYTQEVLCFALSHCSC*ENLLAP Trigger: AGGAGCAAGCAAATTCTCTCAACAACTACAGTGAGA...AAGTGCAAAGCATAAAACCTCCTGTGTGTAAATTATCCCCATGTTGCTTGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR GCA 90 bp | ACCACAAGCAACATGGGGATAATTTACACACAGGAGGTTTTATGCTTTGCACTTCCCTCCACAAGTCCTTaGAATATCCTAACAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TTSNMGIIYTQEVLCFALPSTSP*NILTKM Trigger: CATCTTTGTTAGGATATTGCAAGGACTTGTGGAGGG...AAGTGCAAAGCATAAAACCTCCTGTGTGTAAATTATCCCCATGTTGCTTGTGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR GCA 90 bp | ATCTTTGGCTATGGGAAGGCTCTCACTCTTACCTTATTCTTTGTCATTGCACCAACCTCCACAAGTCCTTaGAATATCCTAACAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: IFGYGKALTLTLFFVIAPTSTSP*NILTKM Trigger: CATCTTTGTTAGGATATTGCAAGGACTTGTGGAGGT...TGGTGCAATGACAAAGAATAAGGTAAGAGTGAGAGCCTTCCCATAGCCAAAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| CDS-3UTR TCA 90 bp | ACCACAAGCAACATGGGGATAATTTACACACAGGAGGTTTTATGCTTTGCACTTATAGTGCATAAAATATaGCTCCACCATAGTGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: TTSNMGIIYTQEVLCFALIVHKI*LHHSGR Trigger: TCGTCCACTATGGTGGAGTCATATTTTATGCACTAT...AAGTGCAAAGCATAAAACCTCCTGTGTGTAAATTATCCCCATGTTGCTTGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR CCA 90 bp | GATGTGCATTCTTATCAGCGCAAAACATTAGAAAGAGCTCTGAGGTTAACTTTTAGCTCCTGCAGAAGTTaGCAACAATTATCGCGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: DVHSYQRKTLERALRLTFSSCRS*QQLSRR Trigger: TCTACGCGATAATTGTTGCCAACTTCTGCAGGAGCT...AAAAGTTAACCTCAGAGCTCTTTCTAATGTTTTGCGCTGATAAGAATGCACATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR GCA 90 bp | AAGCAACATGGGGATAATTTACACACAGGAGGTTTTATGCTTTGCACTTATTGCAAAAAGTCCAGCTCCTaGAGAAGTTGGCAACAATTA | + |
|
Preference number: 4 (lower is better) Translates to: KQHGDNLHTGGFMLCTYCKKSSS*RSWQQL Trigger: TAATTGTTGCCAACTTCTGCAGGAGCTGGACTTTTT...GCAATAAGTGCAAAGCATAAAACCTCCTGTGTGTAAATTATCCCCATGTTGCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS-3UTR GCA 90 bp | AAGCAACATGGGGATAATTTACACACAGGAGGTTTTATGCTTTGCACTTATTGCCAACGCCATTTGAAATaGCCATTAAGATACTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KQHGDNLHTGGFMLCTYCQRHLK*PLRYWH Trigger: ATGCCAGTATCTTAATGGGCATTTCAAATGGCGTTG...GCAATAAGTGCAAAGCATAAAACCTCCTGTGTGTAAATTATCCCCATGTTGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR TCA 90 bp | AAAGTAGAAATTGCAATCCCCAAACCCAACATTAGGTGTATGCTTGTTTTTGGTATACACATAAAATACTaGCGACCATCCAGTGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: KVEIAIPKPNIRCMLVFGIHIKY*RPSSVL Trigger: CAGTACACTGGATGGTCGTCAGTATTTTATGTGTAT...ACCAAAAACAAGCATACACCTAATGTTGGGTTTGGGGATTGCAATTTCTACTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS-3UTR TCA 90 bp | GATGTGCATTCTTATCAGCGCAAAACATTAGAAAGAGCTCTGAGGTTAACTTTTGGAGCAATATCCAAGTaGTTAACATTGAAACCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DVHSYQRKTLERALRLTFGAISK*LTLKPE Trigger: CTCTGGTTTCAATGTTAATCACTTGGATATTGCTCC...AAAAGTTAACCTCAGAGCTCTTTCTAATGTTTTGCGCTGATAAGAATGCACATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS-3UTR CCA 90 bp | AAAGTAGAAATTGCAATCCCCAAACCCAACATTAGGTGTATGCTTGTTTTTGGTTGCGATATATCCTCCTaGAATCTGGGTGATGATATA | + |
|
Preference number: 4 (lower is better) Translates to: KVEIAIPKPNIRCMLVFGCDISS*NLGDDI Trigger: TATATCATCACCCAGATTCCAGGAGGATATATCGCA...ACCAAAAACAAGCATACACCTAATGTTGGGTTTGGGGATTGCAATTTCTACTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| 3UTR CAA 72 bp | ACACACTGTGCACTCCTAGTAAGAGTTCAGTACAGTTaGCTAGCTACACAATATAGTTCTTCATTGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: THCALLVRVQYS*LATQYSSSLKD Trigger: ATCTTTCAATGAAGAACTATATTGTGTAGCTAGCAAACTGTACTGAACTCTTACTAGGAGTGCACAGTGTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS-3UTR GCA 90 bp | AAAGTAGAAATTGCAATCCCCAAACCCAACATTAGGTGTATGCTTGTTTTTGGTGTTGTTGAGAGAATTTaGTTGCTCCTTAGGAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: KVEIAIPKPNIRCMLVFGVVERI*LLLRKS Trigger: AGATTTCCTAAGGAGCAAGCAAATTCTCTCAACAAC...ACCAAAAACAAGCATACACCTAATGTTGGGTTTGGGGATTGCAATTTCTACTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS-3UTR CCA 90 bp | AAAGTAGAAATTGCAATCCCCAAACCCAACATTAGGTGTATGCTTGTTTTTGGTGATACTGGCATATCTTaGAGCAATATCCAAGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: KVEIAIPKPNIRCMLVFGDTGIS*SNIQVI Trigger: AATCACTTGGATATTGCTCCAAGATATGCCAGTATC...ACCAAAAACAAGCATACACCTAATGTTGGGTTTGGGGATTGCAATTTCTACTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS CCA 90 bp | CCTCTCCAAGGGAGGGGCCCACTTGCTCCATATCCCATGACAGGCTaGGTAGGTGACACCCTCCACAAGTCCTTGCAATATCCTAACAAA | + |
|
Preference number: 5 (lower is better) Translates to: PLQGRGPLAPYPMTG*VGDTLHKSLQYPNK Trigger: TTTGTTAGGATATTGCAAGGACTTGTGGAGGGTGTCACCTACCCAGCCTGTCATGGGATATGGAGCAAGTGGGCCCCTCCCTTGGAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS-3UTR CAA 90 bp | GGTAGTGAATGGGGGAGCATGGAGCATACCCCTCCCTTTACAAGCTCTCATTCACACATTTTTCTTCGCTaGTTTCCTCAGGGTCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSEWGSMEHTPPFTSSHSHIFLR*FPQGLP Trigger: GGGCAGACCCTGAGGAAACAAGCGAAGAAAAATGTG...TGAATGAGAGCTTGTAAAGGGAGGGGTATGCTCCATGCTCCCCCATTCACTACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS-3UTR CAA 90 bp | TCACATTGTATATTTGCAGTAGCAGGGCCTCCAGTCAAGAGCACAGGACACCAGGCGTGCCAACGCCATTaGAAATGCCCATTAAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: SHCIFAVAGPPVKSTGHQACQRH*KCPLRY Trigger: GTATCTTAATGGGCATTTCAAATGGCGTTGGCACGC...CTGGTGTCCTGTGCTCTTGACTGGAGGCCCTGCTACTGCAAATATACAATGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS-3UTR CAA 90 bp | CCAACGCCATTTGAAATGCCCATTAAGATACTGGCATATCTTGGAGCAATATCCTCGATGGTCTCTCGGTaGTCCTGCTTCTTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PTPFEMPIKILAYLGAISSMVSR*SCFFSS Trigger: GCTGGAGAAGAAGCAGGACAACCGAGAGACCATCGA...GGATATTGCTCCAAGATATGCCAGTATCTTAATGGGCATTTCAAATGGCGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| CDS-3UTR CAA 90 bp | GTGCCAACTGTTGTAGTTGTGCTCTCTAAAATGGTGATGGGTCCAACGAATACCTTGCACCTAGCAGATTaGCGCTCTCTCCAATGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VPTVVVVLSKMVMGPTNTLHLAD*RSLQCS Trigger: AGAGCATTGGAGAGAGCGCAAATCTGCTAGGTGCAA...GGTATTCGTTGGACCCATCACCATTTTAGAGAGCACAACTACAACAGTTGGCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS-3UTR CAA 90 bp | GTGCCAACTGTTGTAGTTGTGCTCTCTAAAATGGTGATGGGTCCAACGAATACCAATTTGGCTTTCTCCTaGATAACTTTGCCTCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: VPTVVVVLSKMVMGPTNTNLAFS*ITLPPR Trigger: CCGCGGAGGCAAAGTTATCAAGGAGAAAGCCAAATT...GGTATTCGTTGGACCCATCACCATTTTAGAGAGCACAACTACAACAGTTGGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS TCA 90 bp | TTCTTCCTTTTTCTCCCAGCCGTTAGGCCAGCCTCCATTCTCCTGTaGGGTAGCACCGTAAGATTTGGTGGTACCGTAATTTATGTAATT | + |
|
Preference number: 5 (lower is better) Translates to: FFLFLPAVRPASILL*GSTVRFGGTVIYVI Trigger: AATTACATAAATTACGGTACCACCAAATCTTACGGTGCTACCTCACAGGAGAATGGAGGCTGGCCTAACGGCTGGGAGAAAAAGGAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR CAA 90 bp | ACCACAAGCAACATGGGGATAATTTACACACAGGAGGTTTTATGCTTTGCACTTCGGTGGATAGTGCTGTaGTTGACCATGTCCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: TTSNMGIIYTQEVLCFALRWIVL*LTMSTM Trigger: CATCGTGGACATGGTCAACAACAGCACTATCCACCG...AAGTGCAAAGCATAAAACCTCCTGTGTGTAAATTATCCCCATGTTGCTTGTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS-3UTR CAA 90 bp | TACAGAACTTCAGATCACACCATCCCAGAAGACACTGAGTACATACTATATGCTCGGTGGATAGTGCTGTaGTTGACCATGTCCACGATG | + |
|
Preference number: 5 (lower is better) Translates to: YRTSDHTIPEDTEYILYARWIVL*LTMSTM Trigger: CATCGTGGACATGGTCAACAACAGCACTATCCACCG...AGCATATAGTATGTACTCAGTGTCTTCTGGGATGGTGTGATCTGAAGTTCTGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
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| CDS-3UTR CAA 90 bp | GATGTGCATTCTTATCAGCGCAAAACATTAGAAAGAGCTCTGAGGTTAACTTTTTCGATGGTCTCTCGGTaGTCCTGCTTCTTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: DVHSYQRKTLERALRLTFSMVSR*SCFFSS Trigger: GCTGGAGAAGAAGCAGGACAACCGAGAGACCATCGA...AAAAGTTAACCTCAGAGCTCTTTCTAATGTTTTGCGCTGATAAGAATGCACATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS-3UTR CAA 90 bp | GTGCCAACTGTTGTAGTTGTGCTCTCTAAAATGGTGATGGGTCCAACGAATACCGGGTCCCAGTTAAATTaGGCTTTCTCCTTGATAACT | + |
|
Preference number: 5 (lower is better) Translates to: VPTVVVVLSKMVMGPTNTGSQLN*AFSLIT Trigger: AGTTATCAAGGAGAAAGCCAAATTTAACTGGGACCC...GGTATTCGTTGGACCCATCACCATTTTAGAGAGCACAACTACAACAGTTGGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS-3UTR CAA 90 bp | GTGCCAACTGTTGTAGTTGTGCTCTCTAAAATGGTGATGGGTCCAACGAATACCACCCTCCACAAGTCCTaGCAATATCCTAACAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: VPTVVVVLSKMVMGPTNTTLHKS*QYPNKD Trigger: ATCTTTGTTAGGATATTGCAAGGACTTGTGGAGGGT...GGTATTCGTTGGACCCATCACCATTTTAGAGAGCACAACTACAACAGTTGGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS-3UTR CAA 90 bp | CTCCAGTCAAGAGCACAGGACACCAGACAGATCAAATACCCAAAACTGACAGGTAGATACTGGCATATCTaGGAGCAATATCCAAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: LQSRAQDTRQIKYPKLTGRYWHI*EQYPSD Trigger: ATCACTTGGATATTGCTCCAAGATATGCCAGTATCT...ACCTGTCAGTTTTGGGTATTTGATCTGTCTGGTGTCCTGTGCTCTTGACTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR CAA 90 bp | ACCAAAAAGAGAACAGGAAAGCTACATCCCAGCTATAAGAGTGAATCTTTGGCTAATTTGGCTTTCTCCTaGATAACTTTGCCTCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TKKRTGKLHPSYKSESLANLAFS*ITLPPR Trigger: CCGCGGAGGCAAAGTTATCAAGGAGAAAGCCAAATT...AGCCAAAGATTCACTCTTATAGCTGGGATGTAGCTTTCCTGTTCTCTTTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| CDS-3UTR CAA 90 bp | GATGTGCATTCTTATCAGCGCAAAACATTAGAAAGAGCTCTGAGGTTAACTTTTTTCTCCTTGATAACTTaGCCTCCGCGGTGGATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: DVHSYQRKTLERALRLTFFSLIT*PPRWIV Trigger: CACTATCCACCGCGGAGGCAAAGTTATCAAGGAGAA...AAAAGTTAACCTCAGAGCTCTTTCTAATGTTTTGCGCTGATAAGAATGCACATC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR CAA 90 bp | GCTATAAGAGTGAATCTTTGGCTATGGGAAGGCTCTCACTCTTACCTTATTCTTGGGTCCCAGTTAAATTaGGCTTTCTCCTTGATAACT | + |
|
Preference number: 5 (lower is better) Translates to: AIRVNLWLWEGSHSYLILGSQLN*AFSLIT Trigger: AGTTATCAAGGAGAAAGCCAAATTTAACTGGGACCC...AAGAATAAGGTAAGAGTGAGAGCCTTCCCATAGCCAAAGATTCACTCTTATAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| CDS-3UTR CAA 90 bp | GATGTGCATTCTTATCAGCGCAAAACATTAGAAAGAGCTCTGAGGTTAACTTTTGTCTTGCGCACCTTCTaGCACAAATTCTTCCTTTTT | + |
|
Preference number: 5 (lower is better) Translates to: DVHSYQRKTLERALRLTFVLRTF*HKFFLF Trigger: AAAAAGGAAGAATTTGTGCAAGAAGGTGCGCAAGAC...AAAAGTTAACCTCAGAGCTCTTTCTAATGTTTTGCGCTGATAAGAATGCACATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS-3UTR CAA 90 bp | ACTACCAAAAAGAGAACAGGAAAGCTACATCCCAGCTATAAGAGTGAATCTTTGAACCTCCACAAGTCCTaGCAATATCCTAACAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: TTKKRTGKLHPSYKSESLNLHKS*QYPNKD Trigger: ATCTTTGTTAGGATATTGCAAGGACTTGTGGAGGTT...CAAAGATTCACTCTTATAGCTGGGATGTAGCTTTCCTGTTCTCTTTTTGGTAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207945.2 |
||
| CDS CCA 72 bp | GGGAGGGGCCCACTTGCTCCATATCCCATGACAGGCTaGGTAGGTGACACCCTCCACAAGTCCTTGCAATAT | + |
|
Preference number: 6 (lower is better) Translates to: GRGPLAPYPMTG*VGDTLHKSLQY Trigger: ATATTGCAAGGACTTGTGGAGGGTGTCACCTACCCAGCCTGTCATGGGATATGGAGCAAGTGGGCCCCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS GCA 72 bp | CGCAGCCCCAAAGACCCGGTTAGCAGCCAGCCGCGATaGGATATATCCTCCTGGAATCTGGGTGATGATATA | + |
|
Preference number: 6 (lower is better) Translates to: RSPKDPVSSQPR*DISSWNLGDDI Trigger: TATATCATCACCCAGATTCCAGGAGGATATATCGCATCGCGGCTGGCTGCTAACCGGGTCTTTGGGGCTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032710.7 ENSMUST00000207945.2 |
||
| CDS TCA 72 bp | TTTCTCCCAGCCGTTAGGCCAGCCTCCATTCTCCTGTaGGGTAGCACCGTAAGATTTGGTGGTACCGTAATT | + |
|
Preference number: 6 (lower is better) Translates to: FLPAVRPASILL*GSTVRFGGTVI Trigger: AATTACGGTACCACCAAATCTTACGGTGCTACCTCACAGGAGAATGGAGGCTGGCCTAACGGCTGGGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
||
| CDS CAA 90 bp | ATAATCATCTCGGTCCTTATAGGTGTACGCGTCTTGCGCACCTTCTaGCACAAATTCTTCCTTTTTCTCCCAGCCGTTAGGCCAGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: IIISVLIGVRVLRTF*HKFFLFLPAVRPAS Trigger: GGAGGCTGGCCTAACGGCTGGGAGAAAAAGGAAGAATTTGTGCAAGAAGGTGCGCAAGACGCGTACACCTATAAGGACCGAGATGATTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS CAA 72 bp | ATGACAGGCTGGGTAGGTGACACCCTCCACAAGTCCTaGCAATATCCTAACAAAGATGACACATCCATAATG | + |
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Preference number: 6 (lower is better) Translates to: MTGWVGDTLHKS*QYPNKDDTSIM Trigger: CATTATGGATGTGTCATCTTTGTTAGGATATTGCAAGGACTTGTGGAGGGTGTCACCTACCCAGCCTGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS TCA 72 bp | GTGATGTCCCCCGTTTCTTCATCCAGTTCATCTTCGTaGATGAAGCCACATTTTTCTTCGCTTGTTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: VMSPVSSSSSSS*MKPHFSSLVSS Trigger: TGAGGAAACAAGCGAAGAAAAATGTGGCTTCATTCACGAAGATGAACTGGATGAAGAAACGGGGGACATCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS TCA 72 bp | AAGATTTGGTGGTACCGTAATTTATGTAATTCTGAGTaGTGTCCCCCGTTTCTTCATCCAGTTCATCTTCGT | + |
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Preference number: 6 (lower is better) Translates to: KIWWYRNLCNSE*CPPFLHPVHLR Trigger: ACGAAGATGAACTGGATGAAGAAACGGGGGACATCACTCAGAATTACATAAATTACGGTACCACCAAATCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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| CDS TCA 72 bp | ATTAAGATACTGGCATATCTTGGAGCAATATCCAAGTaGTTAACATTGAAACCAGAGATAGCAAATCCACTG | + |
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Preference number: 6 (lower is better) Translates to: IKILAYLGAISK*LTLKPEIANPL Trigger: CAGTGGATTTGCTATCTCTGGTTTCAATGTTAATCACTTGGATATTGCTCCAAGATATGCCAGTATCTTAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032710.7 |
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