Pregenerated sensors for SLC17A5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049624Ensembl transcript IDs: ENSMUST00000052441.12, ENSMUST00000117645.8
Found 117 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGGGCATTCCTGCCCTGCAGCCAGGGAGGGAATGCTTGACAGCTaGCTGGGCACGGATCCCCCAGTACCGCTGCCAGGCTGCCGACTC | + |
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Preference number: 1 (lower is better) Translates to: AGHSCPAAREGMLDS*LGTDPPVPLPGCRL Trigger: GAGTCGGCAGCCTGGCAGCGGTACTGGGGGATCCGTGCCCAGGCAGCTGTCAAGCATTCCCTCCCTGGCTGCAGGGCAGGAATGCCCAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR TCA 90 bp | GGTAAGTGCTGGGCATTCCTGCCCTGCAGCCAGGGAGGGAATGCTTaGCAGCTGCCTGGGCACGGATCCCCCAGTACCGCTGCCAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: GKCWAFLPCSQGGNA*QLPGHGSPSTAARL Trigger: CAGCCTGGCAGCGGTACTGGGGGATCCGTGCCCAGGCAGCTGTCAAGCATTCCCTCCCTGGCTGCAGGGCAGGAATGCCCAGCACTTACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR CCA 90 bp | GGCATTCCTGCCCTGCAGCCAGGGAGGGAATGCTTGACAGCTGCCTaGGCACGGATCCCCCAGTACCGCTGCCAGGCTGCCGACTCTTAC | + |
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Preference number: 1 (lower is better) Translates to: GIPALQPGRECLTAA*ARIPQYRCQAADSY Trigger: GTAAGAGTCGGCAGCCTGGCAGCGGTACTGGGGGATCCGTGCCCAGGCAGCTGTCAAGCATTCCCTCCCTGGCTGCAGGGCAGGAATGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR GCA 90 bp | CCCTGCACTTGGAAGCCACCATCCCTGGTAAGTGCTGGGCATTCCTaGCCTGCAGCCAGGGAGGGAATGCTTGACAGCTGCCTGGGCACG | + |
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Preference number: 1 (lower is better) Translates to: PCTWKPPSLVSAGHS*PAAREGMLDSCLGT Trigger: CGTGCCCAGGCAGCTGTCAAGCATTCCCTCCCTGGCTGCAGGGCAGGAATGCCCAGCACTTACCAGGGATGGTGGCTTCCAAGTGCAGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR GCA 90 bp | AGGGAATGCTTGACAGCTGCCTGGGCACGGATCCCCCAGTACCGCTaGCAGGCTGCCGACTCTTACTGTGGCTGGCAGTTCTTTGGAGAC | + |
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Preference number: 1 (lower is better) Translates to: RECLTAAWARIPQYR*QAADSYCGWQFFGD Trigger: GTCTCCAAAGAACTGCCAGCCACAGTAAGAGTCGGCAGCCTGGCAGCGGTACTGGGGGATCCGTGCCCAGGCAGCTGTCAAGCATTCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR GCA 90 bp | CAGCCATGGGGGAAAGAGTGTCAGCCAAACACTTGTCATTGGCCCTaGACTTGGAAGCCACCATCCCTGGTAAGTGCTGGGCATTCCTGC | + |
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Preference number: 1 (lower is better) Translates to: QPWGKECQPNTCHWP*TWKPPSLVSAGHSC Trigger: GCAGGAATGCCCAGCACTTACCAGGGATGGTGGCTTCCAAGTGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCATGGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR GCA 90 bp | GCCCCTTTGCAGACCAGACTGGCCTCGAAGTCGCAAAGATCTGCCTaGTTCTGCCTCCCAAGTGCTGGCATTAAAGGTACCACCACACAG | + |
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Preference number: 1 (lower is better) Translates to: APLQTRLASKSQRSA*FCLPSAGIKGTTTQ Trigger: CTGTGTGGTGGTACCTTTAATGCCAGCACTTGGGAGGCAGAAGCAGGCAGATCTTTGCGACTTCGAGGCCAGTCTGGTCTGCAAAGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR CCA 90 bp | TGGGGGAAAGAGTGTCAGCCAAACACTTGTCATTGGCCCTGCACTTaGAAGCCACCATCCCTGGTAAGTGCTGGGCATTCCTGCCCTGCA | + |
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Preference number: 1 (lower is better) Translates to: WGKECQPNTCHWPCT*KPPSLVSAGHSCPA Trigger: TGCAGGGCAGGAATGCCCAGCACTTACCAGGGATGGTGGCTTCCAAGTGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR GCA 90 bp | TTGCAGACCAGACTGGCCTCGAAGTCGCAAAGATCTGCCTGCTTCTaGCTCCCAAGTGCTGGCATTAAAGGTACCACCACACAGACTAGG | + |
|
Preference number: 1 (lower is better) Translates to: LQTRLASKSQRSACF*LPSAGIKGTTTQTR Trigger: CCTAGTCTGTGTGGTGGTACCTTTAATGCCAGCACTTGGGAGGCAGAAGCAGGCAGATCTTTGCGACTTCGAGGCCAGTCTGGTCTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR GCA 90 bp | TGTCCATTTCAGCTTCATTTCCTATGCCCTTACCTTATATCATACTaGCTTTCCTGCAGCCTGATATGTGAACCCAGTATACGGCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: CPFQLHFLCPYLISY*LSCSLICEPSIRPG Trigger: GCCAGGCCGTATACTGGGTTCACATATCAGGCTGCAGGAAAGGCAGTATGATATAAGGTAAGGGCATAGGAAATGAAGCTGAAATGGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR GCA 90 bp | CAGCTTCATTTCCTATGCCCTTACCTTATATCATACTGCCTTTCCTaGAGCCTGATATGTGAACCCAGTATACGGCCTGGCAGATATACT | + |
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Preference number: 1 (lower is better) Translates to: QLHFLCPYLISYCLS*SLICEPSIRPGRYT Trigger: AGTATATCTGCCAGGCCGTATACTGGGTTCACATATCAGGCTGCAGGAAAGGCAGTATGATATAAGGTAAGGGCATAGGAAATGAAGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR TCA 90 bp | ATTTCCTATGCCCTTACCTTATATCATACTGCCTTTCCTGCAGCCTaGTATGTGAACCCAGTATACGGCCTGGCAGATATACTAGTAATA | + |
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Preference number: 1 (lower is better) Translates to: ISYALTLYHTAFPAA*YVNPVYGLADILVI Trigger: TATTACTAGTATATCTGCCAGGCCGTATACTGGGTTCACATATCAGGCTGCAGGAAAGGCAGTATGATATAAGGTAAGGGCATAGGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR-3UTR TCA 90 bp | GACAGCTGCCTGGGCACGGATCCCCCAGTACCGCTGCCAGGCTGCCGACTCTTAAGTGCTCGTAACCACTaGGCCATCTGTCCAGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: DSCLGTDPPVPLPGCRLLSARNH*AICPAQ Trigger: TTGGGCTGGACAGATGGCTCAGTGGTTACGAGCACT...TAAGAGTCGGCAGCCTGGCAGCGGTACTGGGGGATCCGTGCCCAGGCAGCTGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR CAA 90 bp | ATGGGGGAAAGAGTGTCAGCCAAACACTTGTCATTGGCCCTGCACTaGGAAGCCACCATCCCTGGTAAGTGCTGGGCATTCCTGCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: MGERVSAKHLSLALH*EATIPGKCWAFLPC Trigger: GCAGGGCAGGAATGCCCAGCACTTACCAGGGATGGTGGCTTCCAAGTGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR-3UTR TCA 90 bp | AGACACTGGTCAGGAAGCAGGGTAAAGGGGACTGACAAGCTTTGGGTGCCCTGCAGTGCTCGTAACCACTaGGCCATCTGTCCAGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: RHWSGSRVKGTDKLWVPCSARNH*AICPAQ Trigger: TTGGGCTGGACAGATGGCTCAGTGGTTACGAGCACT...GCAGGGCACCCAAAGCTTGTCAGTCCCCTTTACCCTGCTTCCTGACCAGTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR CAA 90 bp | AGTACCGCTGCCAGGCTGCCGACTCTTACTGTGGCTGGCAGTTCTTaGGAGACGTTATTGAGGTCTAGGTGTCAGGGAGAGTTGGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: STAARLPTLTVAGSS*ETLLRSRCQGELAS Trigger: GCTTGCCAACTCTCCCTGACACCTAGACCTCAATAACGTCTCCAAAGAACTGCCAGCCACAGTAAGAGTCGGCAGCCTGGCAGCGGTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR-3UTR GCA 90 bp | GACAGCTGCCTGGGCACGGATCCCCCAGTACCGCTGCCAGGCTGCCGACTCTTATACCTTATATCATACTaGCTTTCCTGCAGCCTGATA | + |
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Preference number: 2 (lower is better) Translates to: DSCLGTDPPVPLPGCRLLYLISY*LSCSLI Trigger: TATCAGGCTGCAGGAAAGGCAGTATGATATAAGGTA...TAAGAGTCGGCAGCCTGGCAGCGGTACTGGGGGATCCGTGCCCAGGCAGCTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGCTTTATCTGCAAGTGCTGGGCATTCCTaGCCTGCAGCCAGGGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: QDSSYGSHCSSPLRALSASAGHS*PAAREG Trigger: TCCCTCCCTGGCTGCAGGGCAGGAATGCCCAGCACT...TGCAGATAAAGCTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR CAA 90 bp | ACATTAACAGCCATGGGGGAAAGAGTGTCAGCCAAACACTTGTCATaGGCCCTGCACTTGGAAGCCACCATCCCTGGTAAGTGCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TLTAMGERVSAKHLS*ALHLEATIPGKCWA Trigger: TGCCCAGCACTTACCAGGGATGGTGGCTTCCAAGTGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCATGGCTGTTAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGCTTTATCTGCACATTCAGCCAGGGAGGGAATaGTTGACAGCTGCCTGGGCA | + |
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Preference number: 2 (lower is better) Translates to: TVAMAPTAPVHLELYLHIQPGRE*LTAAWA Trigger: TGCCCAGGCAGCTGTCAAGCATTCCCTCCCTGGCTG...AATGTGCAGATAAAGCTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR-3UTR GCA 90 bp | ATTAACAGCCATGGGGGAAAGAGTGTCAGCCAAACACTTGTCATTGGCCCTGCAACCATCCCTGGTAAGTaGTGGGCATTCCTGCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: INSHGGKSVSQTLVIGPATIPGK*WAFLPC Trigger: GCAGGGCAGGAATGCCCAGCACTTACCAGGGATGGT...TGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCATGGCTGTTAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGCAGTGTCAAGACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGCCAAACACTTGTCATTaGCCCTGCACTTGGAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: AGSVKTVAMAPTAPVHLEPNTCH*PCTWKP Trigger: TGGCTTCCAAGTGCAGGGCCAATGACAAGTGTTTGG...CTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGTCTTGACACTGCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR CAA 90 bp | ATCTGCACATTAACAGCCATGGGGGAAAGAGTGTCAGCCAAACACTaGTCATTGGCCCTGCACTTGGAAGCCACCATCCCTGGTAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: ICTLTAMGERVSAKH*SLALHLEATIPGKC Trigger: GCACTTACCAGGGATGGTGGCTTCCAAGTGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCATGGCTGTTAATGTGCAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGCAGTGTCAAGACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGGACTCTTACTGTGGCTaGCAGTTCTTTGGAGACGTT | + |
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Preference number: 2 (lower is better) Translates to: AGSVKTVAMAPTAPVHLEDSYCG*QFFGDV Trigger: AACGTCTCCAAAGAACTGCCAGCCACAGTAAGAGTC...CTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGTCTTGACACTGCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR-3UTR TCA 90 bp | CAAGACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGCTTTATCTGCACTTTGGAGACGTTATTaGGGTCTAGGTGTCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: QDSSYGSHCSSPLRALSALWRRY*GLGVRE Trigger: CTCCCTGACACCTAGACCTCAATAACGTCTCCAAAG...TGCAGATAAAGCTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGTCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAACAGCCATGGGGGAAAGAGTGTCAGCCAAACACTTGTCATTGGCCCTGCATGCCGACTCTTACTGTaGCTGGCAGTTCTTTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: INSHGGKSVSQTLVIGPACRLLL*LAVLWR Trigger: TCTCCAAAGAACTGCCAGCCACAGTAAGAGTCGGCA...TGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCATGGCTGTTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAACAGCCATGGGGGAAAGAGTGTCAGCCAAACACTTGTCATTGGCCCTGCAGACTCTTACTGTGGCTaGCAGTTCTTTGGAGACGTT | + |
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Preference number: 2 (lower is better) Translates to: INSHGGKSVSQTLVIGPADSYCG*QFFGDV Trigger: AACGTCTCCAAAGAACTGCCAGCCACAGTAAGAGTC...TGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCATGGCTGTTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR-3UTR GCA 90 bp | ATTAACAGCCATGGGGGAAAGAGTGTCAGCCAAACACTTGTCATTGGCCCTGCACAGCTTCATTTCCTATaGCCTTACCTTATATCATAC | + |
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Preference number: 2 (lower is better) Translates to: INSHGGKSVSQTLVIGPAQLHFL*PYLISY Trigger: GTATGATATAAGGTAAGGGCATAGGAAATGAAGCTG...TGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCATGGCTGTTAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR CAA 90 bp | ACCACTGAGCCATCTGTCCAGCCCAACAGCTCATTTTATATGATCTaGGAACTAGTAACATTTCATGATTACCATACAAATATAAGTACT | + |
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Preference number: 2 (lower is better) Translates to: TTEPSVQPNSSFYMI*ELVTFHDYHTNIST Trigger: AGTACTTATATTTGTATGGTAATCATGAAATGTTACTAGTTCCAAGATCATATAAAATGAGCTGTTGGGCTGGACAGATGGCTCAGTGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR CCA 72 bp | TGCCAGGAGTCGGGCCCGGGTGCTGCCGAGGCAGGCTaGCAGTGTCAAGACAGTAGCTATGGCTCCCACTGC | + |
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Preference number: 3 (lower is better) Translates to: CQESGPGAAEAG*QCQDSSYGSHC Trigger: GCAGTGGGAGCCATAGCTACTGTCTTGACACTGCCAGCCTGCCTCGGCAGCACCCGGGCCCGACTCCTGGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR TCA 72 bp | TGGGCATTCCTGCCCTGCAGCCAGGGAGGGAATGCTTaGCAGCTGCCTGGGCACGGATCCCCCAGTACCGCT | + |
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Preference number: 3 (lower is better) Translates to: WAFLPCSQGGNA*QLPGHGSPSTA Trigger: AGCGGTACTGGGGGATCCGTGCCCAGGCAGCTGTCAAGCATTCCCTCCCTGGCTGCAGGGCAGGAATGCCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR GCA 72 bp | TTGACAGCTGCCTGGGCACGGATCCCCCAGTACCGCTaGCAGGCTGCCGACTCTTACTGTGGCTGGCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: LTAAWARIPQYR*QAADSYCGWQF Trigger: GAACTGCCAGCCACAGTAAGAGTCGGCAGCCTGGCAGCGGTACTGGGGGATCCGTGCCCAGGCAGCTGTCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR GCA 72 bp | TGCCTGGGCACGGATCCCCCAGTACCGCTGCCAGGCTaGCGACTCTTACTGTGGCTGGCAGTTCTTTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: CLGTDPPVPLPG*RLLLWLAVLWR Trigger: TCTCCAAAGAACTGCCAGCCACAGTAAGAGTCGGCAGCCTGGCAGCGGTACTGGGGGATCCGTGCCCAGGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR CCA 72 bp | GCCCTGCACTTGGAAGCCACCATCCCTGGTAAGTGCTaGGCATTCCTGCCCTGCAGCCAGGGAGGGAATGCT | + |
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Preference number: 3 (lower is better) Translates to: ALHLEATIPGKC*AFLPCSQGGNA Trigger: AGCATTCCCTCCCTGGCTGCAGGGCAGGAATGCCCAGCACTTACCAGGGATGGTGGCTTCCAAGTGCAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR GCA 72 bp | TGGAAGCCACCATCCCTGGTAAGTGCTGGGCATTCCTaGCCTGCAGCCAGGGAGGGAATGCTTGACAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: WKPPSLVSAGHS*PAAREGMLDSC Trigger: GCAGCTGTCAAGCATTCCCTCCCTGGCTGCAGGGCAGGAATGCCCAGCACTTACCAGGGATGGTGGCTTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR CCA 72 bp | GAGTGTCAGCCAAACACTTGTCATTGGCCCTGCACTTaGAAGCCACCATCCCTGGTAAGTGCTGGGCATTCC | + |
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Preference number: 3 (lower is better) Translates to: ECQPNTCHWPCT*KPPSLVSAGHS Trigger: GGAATGCCCAGCACTTACCAGGGATGGTGGCTTCCAAGTGCAGGGCCAATGACAAGTGTTTGGCTGACACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR-3UTR CAA 90 bp | GACAGCTGCCTGGGCACGGATCCCCCAGTACCGCTGCCAGGCTGCCGACTCTTATCTCACATAGAATGCTaGCACATTCAAATACCAAAG | + |
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Preference number: 3 (lower is better) Translates to: DSCLGTDPPVPLPGCRLLSHIEC*HIQIPK Trigger: CTTTGGTATTTGAATGTGCAAGCATTCTATGTGAGA...TAAGAGTCGGCAGCCTGGCAGCGGTACTGGGGGATCCGTGCCCAGGCAGCTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR GCA 72 bp | AGACTGGCCTCGAAGTCGCAAAGATCTGCCTGCTTCTaGCTCCCAAGTGCTGGCATTAAAGGTACCACCACA | + |
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Preference number: 3 (lower is better) Translates to: RLASKSQRSACF*LPSAGIKGTTT Trigger: TGTGGTGGTACCTTTAATGCCAGCACTTGGGAGGCAGAAGCAGGCAGATCTTTGCGACTTCGAGGCCAGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR CCA 72 bp | CCATGGGGGAAAGAGTGTCAGCCAAACACTTGTCATTaGCCCTGCACTTGGAAGCCACCATCCCTGGTAAGT | + |
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Preference number: 3 (lower is better) Translates to: PWGKECQPNTCH*PCTWKPPSLVS Trigger: ACTTACCAGGGATGGTGGCTTCCAAGTGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR CCA 72 bp | GGACCTCTTACAGTGTGCCTAACCACTGGGAGACACTaGTCAGGAAGCAGGGTAAAGGGGACTGACAAGCTT | + |
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Preference number: 3 (lower is better) Translates to: GPLTVCLTTGRH*SGSRVKGTDKL Trigger: AAGCTTGTCAGTCCCCTTTACCCTGCTTCCTGACCAGTGTCTCCCAGTGGTTAGGCACACTGTAAGAGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR TCA 72 bp | TGGGAGACACTGGTCAGGAAGCAGGGTAAAGGGGACTaGCAAGCTTTGGGTGCCCTGCCTTTTACCTCTATT | + |
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Preference number: 3 (lower is better) Translates to: WETLVRKQGKGD*QALGALPFTSI Trigger: AATAGAGGTAAAAGGCAGGGCACCCAAAGCTTGTCAGTCCCCTTTACCCTGCTTCCTGACCAGTGTCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR-3UTR CAA 90 bp | GCTGGCAGTGTCAAGACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGAGGTGTCAGGGAGAGTaGGCAAGCATTTTTATAAGG | + |
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Preference number: 3 (lower is better) Translates to: AGSVKTVAMAPTAPVHLERCQGE*ASIFIR Trigger: CCTTATAAAAATGCTTGCCAACTCTCCCTGACACCT...CTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGTCTTGACACTGCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR-3UTR CAA 90 bp | ATTAACAGCCATGGGGGAAAGAGTGTCAGCCAAACACTTGTCATTGGCCCTGCAGTGGCTGGCAGTTCTTaGGAGACGTTATTGAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: INSHGGKSVSQTLVIGPAVAGSS*ETLLRS Trigger: AGACCTCAATAACGTCTCCAAAGAACTGCCAGCCAC...TGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCATGGCTGTTAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR TCA 72 bp | CTCTTACTGTGGCTGGCAGTTCTTTGGAGACGTTATTaGGGTCTAGGTGTCAGGGAGAGTTGGCAAGCATTT | + |
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Preference number: 3 (lower is better) Translates to: LLLWLAVLWRRY*GLGVRESWQAF Trigger: AAATGCTTGCCAACTCTCCCTGACACCTAGACCTCAATAACGTCTCCAAAGAACTGCCAGCCACAGTAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR GCA 72 bp | GATCCCATTACAGATGGTTATGAGCCACCATGTGGTTaGTGGGAATTGAACTCAGGACCTCTCCAAGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: DPITDGYEPPCG*WELNSGPLQEQ Trigger: TTGCTCTTGGAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCATAACCATCTGTAATGGGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| 3UTR CCA 72 bp | CCCATTACAGATGGTTATGAGCCACCATGTGGTTGCTaGGAATTGAACTCAGGACCTCTCCAAGAGCAATCA | + |
|
Preference number: 3 (lower is better) Translates to: PITDGYEPPCGC*ELNSGPLQEQS Trigger: TGATTGCTCTTGGAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGGCTCATAACCATCTGTAATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| 3UTR-3UTR CAA 90 bp | CCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTCCAAGAGCAATCAGTGCTCTCTCACATAGAATGCTaGCACATTCAAATACCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PCGCWELNSGPLQEQSVLSHIEC*HIQIPK Trigger: CTTTGGTATTTGAATGTGCAAGCATTCTATGTGAGA...GAGCACTGATTGCTCTTGGAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| 3UTR CCA 72 bp | GGGTGCCCTGCCTTTTACCTCTATTTTGGTGTTGAATaGAGCACAATCCTATGTAAATGCTCTACCACTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GCPAFYLYFGVE*STILCKCSTTE Trigger: CTCAGTGGTAGAGCATTTACATAGGATTGTGCTCCATTCAACACCAAAATAGAGGTAAAAGGCAGGGCACCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTCCATTTCAGCTTCATTTCCTATaGCCTTACCTTATATCATACTGCCTTTCCTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCPFQLHFL*PYLISYCLSCS Trigger: GCTGCAGGAAAGGCAGTATGATATAAGGTAAGGGCATAGGAAATGAAGCTGAAATGGACACACACACACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR TCA 90 bp | AGACACTGGTCAGGAAGCAGGGTAAAGGGGACTGACAAGCTTTGGGTGCCCTGCGTCCGTGGTGGTCACTaGGAGCCCAGCTCTGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RHWSGSRVKGTDKLWVPCVRGGH*EPSSAL Trigger: AAGTGCAGAGCTGGGCTCTCAGTGACCACCACGGAC...GCAGGGCACCCAAAGCTTGTCAGTCCCCTTTACCCTGCTTCCTGACCAGTGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR CCA 90 bp | GACAGCTGCCTGGGCACGGATCCCCCAGTACCGCTGCCAGGCTGCCGACTCTTATGTGGTGAACTTTTATaGGGGCAGAATGTTCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DSCLGTDPPVPLPGCRLLCGELL*GQNVPH Trigger: GTGCGGAACATTCTGCCCCCATAAAAGTTCACCACA...TAAGAGTCGGCAGCCTGGCAGCGGTACTGGGGGATCCGTGCCCAGGCAGCTGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR GCA 90 bp | CAAGACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGCTTTATCTGCACGGAGGTGCCTAAGATaGCCAGGCCCAGCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QDSSYGSHCSSPLRALSARRCLR*PGPAAA Trigger: AGCTGCTGCTGGGCCTGGGCATCTTAGGCACCTCCG...TGCAGATAAAGCTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| 3UTR CAA 72 bp | GCCAGGCTGCCGACTCTTACTGTGGCTGGCAGTTCTTaGGAGACGTTATTGAGGTCTAGGTGTCAGGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARLPTLTVAGSS*ETLLRSRCQGE Trigger: CTCTCCCTGACACCTAGACCTCAATAACGTCTCCAAAGAACTGCCAGCCACAGTAAGAGTCGGCAGCCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| 3UTR CAA 72 bp | GCCATGGGGGAAAGAGTGTCAGCCAAACACTTGTCATaGGCCCTGCACTTGGAAGCCACCATCCCTGGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: AMGERVSAKHLS*ALHLEATIPGK Trigger: CTTACCAGGGATGGTGGCTTCCAAGTGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCATGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR GCA 90 bp | ACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGCTTTATCTGCACATTCGGAGGTGCCTAAGATaGCCAGGCCCAGCAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TVAMAPTAPVHLELYLHIRRCLR*PGPAAA Trigger: AGCTGCTGCTGGGCCTGGGCATCTTAGGCACCTCCG...AATGTGCAGATAAAGCTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR GCA 90 bp | CCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTCCAAGAGCAATCAGTGCTCCTGAGAGCCCAGCTCTaGACTTCCCCTTTGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PCGCWELNSGPLQEQSVLLRAQL*TSPLAN Trigger: GTTTGCCAAAGGGGAAGTGCAGAGCTGGGCTCTCAG...GAGCACTGATTGCTCTTGGAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR CCA 90 bp | CCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTCCAAGAGCAATCAGTGCTCCAGTTTCTGTGTCCGTaGTGGTCACTGAGAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PCGCWELNSGPLQEQSVLQFLCP*WSLRAQ Trigger: CTGGGCTCTCAGTGACCACCACGGACACAGAAACTG...GAGCACTGATTGCTCTTGGAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| 3UTR CAA 72 bp | TTAACAGCCATGGGGGAAAGAGTGTCAGCCAAACACTaGTCATTGGCCCTGCACTTGGAAGCCACCATCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTAMGERVSAKH*SLALHLEATIP Trigger: AGGGATGGTGGCTTCCAAGTGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCATGGCTGTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR TCA 90 bp | AGACACTGGTCAGGAAGCAGGGTAAAGGGGACTGACAAGCTTTGGGTGCCCTGCTGGGAGATTGTCTTGTaGGTTTCTGGTGTATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RHWSGSRVKGTDKLWVPCWEIVL*VSGVSL Trigger: CAGTGATACACCAGAAACTCACAAGACAATCTCCCA...GCAGGGCACCCAAAGCTTGTCAGTCCCCTTTACCCTGCTTCCTGACCAGTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR TCA 90 bp | CAAGACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGCTTTATCTGCATGCCCAAAGTGGCAGTaGCTTCAAGATGGACCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QDSSYGSHCSSPLRALSACPKWQ*LQDGPP Trigger: TGGGGGTCCATCTTGAAGTCACTGCCACTTTGGGCA...TGCAGATAAAGCTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGTCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR GCA 90 bp | CAAGACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGCTTTATCTGCACTGAGAGCCCAGCTCTaGACTTCCCCTTTGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QDSSYGSHCSSPLRALSALRAQL*TSPLAN Trigger: GTTTGCCAAAGGGGAAGTGCAGAGCTGGGCTCTCAG...TGCAGATAAAGCTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGTCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR CCA 90 bp | ATTAACAGCCATGGGGGAAAGAGTGTCAGCCAAACACTTGTCATTGGCCCTGCATTTCTGTGTCCGTGGTaGTCACTGAGAGCCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: INSHGGKSVSQTLVIGPAFLCPW*SLRAQL Trigger: GAGCTGGGCTCTCAGTGACCACCACGGACACAGAAA...TGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCATGGCTGTTAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR CCA 90 bp | CAAGACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGCTTTATCTGCACAGTTTCTGTGTCCGTaGTGGTCACTGAGAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QDSSYGSHCSSPLRALSAQFLCP*WSLRAQ Trigger: CTGGGCTCTCAGTGACCACCACGGACACAGAAACTG...TGCAGATAAAGCTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR TCA 90 bp | ATTAACAGCCATGGGGGAAAGAGTGTCAGCCAAACACTTGTCATTGGCCCTGCATCCGGAAAGAGGAAGTaGGATCACTGTCCCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: INSHGGKSVSQTLVIGPASGKRK*DHCPKL Trigger: CAGCTTGGGACAGTGATCTCACTTCCTCTTTCCGGA...TGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCATGGCTGTTAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR TCA 90 bp | AATGTGTGTGAGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGGGCATCTGTGCCCAAAGTGGCAGTaGCTTCAAGATGGACCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NVCEYTVSVFRHTRRGHLCPKWQ*LQDGPP Trigger: TGGGGGTCCATCTTGAAGTCACTGCCACTTTGGGCA...CAGATGCCCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACTCACACACATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTCTGTCTTCAGACACACCAGAAGAGGGCATCTGATCCCATTACAGATGGTCCAGCGTCGTGGATATaGTTAGGAACGCAACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLCLQTHQKRASDPITDGPASWI*LGTQRP Trigger: TGGCCGTTGCGTTCCTAACCATATCCACGACGCTGG...ACCATCTGTAATGGGATCAGATGCCCTCTTCTGGTGTGTCTGAAGACAGAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTCTGTCTTCAGACACACCAGAAGAGGGCATCTGATCCCATTACAGATGGTTTTCTGTGTCCGTGGTaGTCACTGAGAGCCCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CLCLQTHQKRASDPITDGFLCPW*SLRAQL Trigger: GAGCTGGGCTCTCAGTGACCACCACGGACACAGAAA...ACCATCTGTAATGGGATCAGATGCCCTCTTCTGGTGTGTCTGAAGACAGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTCTGTCTTCAGACACACCAGAAGAGGGCATCTGATCCCATTACAGATGGTCCGAGAATCCACCCTTaGGTTTCTGCATCCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: CLCLQTHQKRASDPITDGPRIHP*VSASHL Trigger: CAAGTGGGATGCAGAAACTCAAGGGTGGATTCTCGG...ACCATCTGTAATGGGATCAGATGCCCTCTTCTGGTGTGTCTGAAGACAGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052441.12 |
||
| CDS-3UTR TCA 90 bp | AATGTGTGTGAGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGGGCATCTGTCCGGAAAGAGGAAGTaGGATCACTGTCCCAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NVCEYTVSVFRHTRRGHLSGKRK*DHCPKL Trigger: CAGCTTGGGACAGTGATCTCACTTCCTCTTTCCGGA...CAGATGCCCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACTCACACACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR TCA 90 bp | GCTGGCAGTGTCAAGACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGTTGAAAAGTTCCACTTaGCCCTTAAATAGTCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: AGSVKTVAMAPTAPVHLELKSST*PLNSQR Trigger: CCGCTGACTATTTAAGGGTCAAGTGGAACTTTTCAA...CTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGTCTTGACACTGCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTCTGTCTTCAGACACACCAGAAGAGGGCATCTGATCCCATTACAGATGGTCACTGTCCCAAGCTGTaGTCCCGCATAGGAAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: CLCLQTHQKRASDPITDGHCPKL*SRIGNG Trigger: ACCATTTCCTATGCGGGAGCACAGCTTGGGACAGTG...ACCATCTGTAATGGGATCAGATGCCCTCTTCTGGTGTGTCTGAAGACAGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR GCA 90 bp | AATGTGTGTGAGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGGGCATCTGCACTGTCCCAAGCTGTaGTCCCGCATAGGAAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: NVCEYTVSVFRHTRRGHLHCPKL*SRIGNG Trigger: ACCATTTCCTATGCGGGAGCACAGCTTGGGACAGTG...CAGATGCCCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACTCACACACATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR TCA 90 bp | ATTAACAGCCATGGGGGAAAGAGTGTCAGCCAAACACTTGTCATTGGCCCTGCACTTTGGCAAACAGCGTaGAGAAAATGGCCCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: INSHGGKSVSQTLVIGPALWQTA*RKWPQT Trigger: TGTTTGGGGCCATTTTCTTCACGCTGTTTGCCAAAG...TGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCATGGCTGTTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR GCA 90 bp | ATTAACAGCCATGGGGGAAAGAGTGTCAGCCAAACACTTGTCATTGGCCCTGCAGAAGACCACATGGCGTaGATAGCTGGAAACGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: INSHGGKSVSQTLVIGPAEDHMA*IAGNVT Trigger: TGTTACGTTTCCAGCTATGCACGCCATGTGGTCTTC...TGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCATGGCTGTTAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR GCA 90 bp | TGTCTCTGTCTTCAGACACACCAGAAGAGGGCATCTGATCCCATTACAGATGGTGAAGACCACATGGCGTaGATAGCTGGAAACGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: CLCLQTHQKRASDPITDGEDHMA*IAGNVT Trigger: TGTTACGTTTCCAGCTATGCACGCCATGTGGTCTTC...ACCATCTGTAATGGGATCAGATGCCCTCTTCTGGTGTGTCTGAAGACAGAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTCTGTCTTCAGACACACCAGAAGAGGGCATCTGATCCCATTACAGATGGTTGTGGTGAACTTTTATaGGGGCAGAATGTTCCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CLCLQTHQKRASDPITDGCGELL*GQNVPH Trigger: GTGCGGAACATTCTGCCCCCATAAAAGTTCACCACA...ACCATCTGTAATGGGATCAGATGCCCTCTTCTGGTGTGTCTGAAGACAGAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR TCA 90 bp | TGTCTCTGTCTTCAGACACACCAGAAGAGGGCATCTGATCCCATTACAGATGGTTGGGAGATTGTCTTGTaGGTTTCTGGTGTATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: CLCLQTHQKRASDPITDGWEIVL*VSGVSL Trigger: CAGTGATACACCAGAAACTCACAAGACAATCTCCCA...ACCATCTGTAATGGGATCAGATGCCCTCTTCTGGTGTGTCTGAAGACAGAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR TCA 90 bp | CCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTCCAAGAGCAATCAGTGCTCCGTTCTCTTGAACATTaGACCTTAGGATTTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PCGCWELNSGPLQEQSVLRSLEH*TLGFPS Trigger: TGAAGGAAATCCTAAGGTTCAATGTTCAAGAGAACG...GAGCACTGATTGCTCTTGGAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGTCCAGCCCAACAGCTCATTTTATATGATCTTGGAACTAGTAACATTTCAGTCCGTGGTGGTCACTaGGAGCCCAGCTCTGCACTT | + |
|
Preference number: 4 (lower is better) Translates to: ICPAQQLILYDLGTSNISVRGGH*EPSSAL Trigger: AAGTGCAGAGCTGGGCTCTCAGTGACCACCACGGAC...TGAAATGTTACTAGTTCCAAGATCATATAAAATGAGCTGTTGGGCTGGACAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR GCA 90 bp | ATTAACAGCCATGGGGGAAAGAGTGTCAGCCAAACACTTGTCATTGGCCCTGCAGACCACAGAGGATCATaGATAACCAACAGCCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: INSHGGKSVSQTLVIGPADHRGS*ITNSQN Trigger: ATTTTGGCTGTTGGTTATGCATGATCCTCTGTGGTC...TGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCATGGCTGTTAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR CCA 90 bp | CAAGACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGCTTTATCTGCAGGAGCGATATCCAGATaGTTGATGCTAAATCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QDSSYGSHCSSPLRALSAGAISR*LMLNPE Trigger: TTCTGGATTTAGCATCAACCATCTGGATATCGCTCC...TGCAGATAAAGCTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR TCA 90 bp | ATTAACAGCCATGGGGGAAAGAGTGTCAGCCAAACACTTGTCATTGGCCCTGCACGTTCTCTTGAACATTaGACCTTAGGATTTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: INSHGGKSVSQTLVIGPARSLEH*TLGFPS Trigger: TGAAGGAAATCCTAAGGTTCAATGTTCAAGAGAACG...TGCAGGGCCAATGACAAGTGTTTGGCTGACACTCTTTCCCCCATGGCTGTTAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR GCA 90 bp | AATGTGTGTGAGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGGGCATCTGCCACCCTTGAGTTTCTaGATCCCACTTGTACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: NVCEYTVSVFRHTRRGHLPPLSF*IPLVLF Trigger: AAAAAGTACAAGTGGGATGCAGAAACTCAAGGGTGG...CAGATGCCCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACTCACACACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052441.12 |
||
| CDS-3UTR CCA 90 bp | CAAGACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGCTTTATCTGCATGTCTTGTGAGTTTCTaGTGTATCACTGACTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: QDSSYGSHCSSPLRALSACLVSF*CITDYP Trigger: TGGATAGTCAGTGATACACCAGAAACTCACAAGACA...TGCAGATAAAGCTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGTCTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR CCA 90 bp | TGTCTCTGTCTTCAGACACACCAGAAGAGGGCATCTGATCCCATTACAGATGGTGGAGCGATATCCAGATaGTTGATGCTAAATCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CLCLQTHQKRASDPITDGGAISR*LMLNPE Trigger: TTCTGGATTTAGCATCAACCATCTGGATATCGCTCC...ACCATCTGTAATGGGATCAGATGCCCTCTTCTGGTGTGTCTGAAGACAGAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR CCA 90 bp | ACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGCTTTATCTGCACATTTGTCTTGTGAGTTTCTaGTGTATCACTGACTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVAMAPTAPVHLELYLHICLVSF*CITDYP Trigger: TGGATAGTCAGTGATACACCAGAAACTCACAAGACA...AATGTGCAGATAAAGCTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| 3UTR CAA 72 bp | GCTTTGGGTGCCCTGCCTTTTACCTCTATTTTGGTGTaGAATGGAGCACAATCCTATGTAAATGCTCTACCA | + |
|
Preference number: 4 (lower is better) Translates to: ALGALPFTSILV*NGAQSYVNALP Trigger: TGGTAGAGCATTTACATAGGATTGTGCTCCATTCAACACCAAAATAGAGGTAAAAGGCAGGGCACCCAAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR TCA 90 bp | AATGTGTGTGAGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGGGCATCTGAAAAACCCGTTCTCTTaGACATTGAACCTTAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: NVCEYTVSVFRHTRRGHLKNPFS*TLNLRI Trigger: AATCCTAAGGTTCAATGTTCAAGAGAACGGGTTTTT...CAGATGCCCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACTCACACACATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGTCCAGCCCAACAGCTCATTTTATATGATCTTGGAACTAGTAACATTTCACTTTGGCAAACAGCGTaGAGAAAATGGCCCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ICPAQQLILYDLGTSNISLWQTA*RKWPQT Trigger: TGTTTGGGGCCATTTTCTTCACGCTGTTTGCCAAAG...TGAAATGTTACTAGTTCCAAGATCATATAAAATGAGCTGTTGGGCTGGACAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
||
| CDS-3UTR TCA 90 bp | GTGAACCCAGTATACGGCCTGGCAGATATACTAGTAATAATTAAAAACAGCTCATTGAAAAGTTCCACTTaGCCCTTAAATAGTCAGCGG | + |
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Preference number: 4 (lower is better) Translates to: VNPVYGLADILVIIKNSSLKSST*PLNSQR Trigger: CCGCTGACTATTTAAGGGTCAAGTGGAACTTTTCAA...TGAGCTGTTTTTAATTATTACTAGTATATCTGCCAGGCCGTATACTGGGTTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS-3UTR GCA 90 bp | ATCTGTCCAGCCCAACAGCTCATTTTATATGATCTTGGAACTAGTAACATTTCAGACCACAGAGGATCATaGATAACCAACAGCCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: ICPAQQLILYDLGTSNISDHRGS*ITNSQN Trigger: ATTTTGGCTGTTGGTTATGCATGATCCTCTGTGGTC...TGAAATGTTACTAGTTCCAAGATCATATAAAATGAGCTGTTGGGCTGGACAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS-3UTR TCA 90 bp | ATCTGTCCAGCCCAACAGCTCATTTTATATGATCTTGGAACTAGTAACATTTCAAAAAACCCGTTCTCTTaGACATTGAACCTTAGGATT | + |
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Preference number: 4 (lower is better) Translates to: ICPAQQLILYDLGTSNISKNPFS*TLNLRI Trigger: AATCCTAAGGTTCAATGTTCAAGAGAACGGGTTTTT...TGAAATGTTACTAGTTCCAAGATCATATAAAATGAGCTGTTGGGCTGGACAGAT 37% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS GCA 90 bp | GCTAAGTTGTACCGAGCAGAGCAGCACACTGGAGCCGCTTCGGTCTaGCGGGCGCCCGGCAGGAGCGGGGTGCTGTCCGAGCTCTCCTCA | + |
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Preference number: 5 (lower is better) Translates to: AKLYRAEQHTGAASV*RAPGRSGVLSELSS Trigger: TGAGGAGAGCTCGGACAGCACCCCGCTCCTGCCGGGCGCCCGGCAGACCGAAGCGGCTCCAGTGTGCTGCTCTGCTCGGTACAACTTAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS CCA 90 bp | TCTTTCCAGAGGGGGAGCCCAGGAAGACCACATGGCGTGCATAGCTaGAAACGTAACACCCTCTCCCAGTCCTTCCAGCGCTCTAAGCAC | + |
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Preference number: 5 (lower is better) Translates to: SFQRGSPGRPHGVHS*KRNTLSQSFQRSKH Trigger: GTGCTTAGAGCGCTGGAAGGACTGGGAGAGGGTGTTACGTTTCCAGCTATGCACGCCATGTGGTCTTCCTGGGCTCCCCCTCTGGAAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS CCA 90 bp | GTGATGCCCAAGAGGATGCCAGCATACGAAGGAGCGATATCCAGATaGTTGATGCTAAATCCAGAAGAGGCGAAGCCTCCCAGCGTCGTG | + |
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Preference number: 5 (lower is better) Translates to: VMPKRMPAYEGAISR*LMLNPEEAKPPSVV Trigger: CACGACGCTGGGAGGCTTCGCCTCTTCTGGATTTAGCATCAACCATCTGGATATCGCTCCTTCGTATGCTGGCATCCTCTTGGGCATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS TCA 90 bp | CCAGTTGTAGGAGAAATGTGCTACCACAATTGCCCAAAGTGGCAGTaGCTTCAAGATGGACCCCCACGGCACCACCTTCTGCGAAGAAAG | + |
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Preference number: 5 (lower is better) Translates to: PVVGEMCYHNCPKWQ*LQDGPPRHHLLRRK Trigger: CTTTCTTCGCAGAAGGTGGTGCCGTGGGGGTCCATCTTGAAGTCACTGCCACTTTGGGCAATTGTGGTAGCACATTTCTCCTACAACTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS-3UTR CAA 90 bp | ACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGCTTTATCTGCACATTGCCAAAATCGCTAAGTaGTACCGAGCAGAGCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: TVAMAPTAPVHLELYLHIAKIAK*YRAEQH Trigger: GTGCTGCTCTGCTCGGTACAACTTAGCGATTTTGGC...AATGTGCAGATAAAGCTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS-3UTR CAA 90 bp | GCTGGCAGTGTCAAGACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGCAGTCAGAGTTGTATTaGAATCTACCATGTCCACTA | + |
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Preference number: 5 (lower is better) Translates to: AGSVKTVAMAPTAPVHLEQSELY*NLPCPL Trigger: TAGTGGACATGGTAGATTCAAATACAACTCTGACTG...CTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGTCTTGACACTGCCAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS-3UTR CAA 90 bp | CCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTCCAAGAGCAATCAGTGCTCGCGATATCCAGATGGTaGATGCTAAATCCAGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: PCGCWELNSGPLQEQSVLAISRW*MLNPEE Trigger: CTCTTCTGGATTTAGCATCAACCATCTGGATATCGC...GAGCACTGATTGCTCTTGGAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS-3UTR CAA 90 bp | AATGTGTGTGAGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGGGCATCTGAATGTGCTACCACAATaGCCCAAAGTGGCAGTGACT | + |
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Preference number: 5 (lower is better) Translates to: NVCEYTVSVFRHTRRGHLNVLPQ*PKVAVT Trigger: AGTCACTGCCACTTTGGGCAATTGTGGTAGCACATT...CAGATGCCCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACTCACACACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS-3UTR CAA 90 bp | AATGTGTGTGAGTACACTGTCTCTGTCTTCAGACACACCAGAAGAGGGCATCTGGCGATATCCAGATGGTaGATGCTAAATCCAGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: NVCEYTVSVFRHTRRGHLAISRW*MLNPEE Trigger: CTCTTCTGGATTTAGCATCAACCATCTGGATATCGC...CAGATGCCCTCTTCTGGTGTGTCTGAAGACAGAGACAGTGTACTCACACACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS-3UTR CAA 90 bp | ACAGTAGCTATGGCTCCCACTGCTCCAGTCCACTTAGAGCTTTATCTGCACATTTTTCATAATGGGAGATaGTCTTGTGAGTTTCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: TVAMAPTAPVHLELYLHIFHNGR*SCEFLV Trigger: CACCAGAAACTCACAAGACAATCTCCCATTATGAAA...AATGTGCAGATAAAGCTCTAAGTGGACTGGAGCAGTGGGAGCCATAGCTACTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS-3UTR CAA 90 bp | ATCTGTCCAGCCCAACAGCTCATTTTATATGATCTTGGAACTAGTAACATTTCAGCCAAAATCGCTAAGTaGTACCGAGCAGAGCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: ICPAQQLILYDLGTSNISAKIAK*YRAEQH Trigger: GTGCTGCTCTGCTCGGTACAACTTAGCGATTTTGGC...TGAAATGTTACTAGTTCCAAGATCATATAAAATGAGCTGTTGGGCTGGACAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS-3UTR CAA 90 bp | ATCTGTCCAGCCCAACAGCTCATTTTATATGATCTTGGAACTAGTAACATTTCAAATGTGCTACCACAATaGCCCAAAGTGGCAGTGACT | + |
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Preference number: 5 (lower is better) Translates to: ICPAQQLILYDLGTSNISNVLPQ*PKVAVT Trigger: AGTCACTGCCACTTTGGGCAATTGTGGTAGCACATT...TGAAATGTTACTAGTTCCAAGATCATATAAAATGAGCTGTTGGGCTGGACAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS-3UTR CAA 90 bp | GTGAACCCAGTATACGGCCTGGCAGATATACTAGTAATAATTAAAAACAGCTCACAGTCAGAGTTGTATTaGAATCTACCATGTCCACTA | + |
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Preference number: 5 (lower is better) Translates to: VNPVYGLADILVIIKNSSQSELY*NLPCPL Trigger: TAGTGGACATGGTAGATTCAAATACAACTCTGACTG...TGAGCTGTTTTTAATTATTACTAGTATATCTGCCAGGCCGTATACTGGGTTCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS GCA 72 bp | TACCGAGCAGAGCAGCACACTGGAGCCGCTTCGGTCTaGCGGGCGCCCGGCAGGAGCGGGGTGCTGTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: YRAEQHTGAASV*RAPGRSGVLSE Trigger: CTCGGACAGCACCCCGCTCCTGCCGGGCGCCCGGCAGACCGAAGCGGCTCCAGTGTGCTGCTCTGCTCGGTA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS CCA 72 bp | TGCCCAGGCCCAGCAGCAGCTTCCCTCCGACCCTGCTaGCAATGTACCCACCGGGAATTGTGTGATTGTGGT | + |
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Preference number: 6 (lower is better) Translates to: CPGPAAASLRPC*QCTHRELCDCG Trigger: ACCACAATCACACAATTCCCGGTGGGTACATTGCCAGCAGGGTCGGAGGGAAGCTGCTGCTGGGCCTGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117645.8 |
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| CDS GCA 72 bp | CTTTCCAGAGGGGGAGCCCAGGAAGACCACATGGCGTaGATAGCTGGAAACGTAACACCCTCTCCCAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: LSRGGAQEDHMA*IAGNVTPSPSP Trigger: AGGACTGGGAGAGGGTGTTACGTTTCCAGCTATGCACGCCATGTGGTCTTCCTGGGCTCCCCCTCTGGAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS TCA 72 bp | GGAGAAATGTGCTACCACAATTGCCCAAAGTGGCAGTaGCTTCAAGATGGACCCCCACGGCACCACCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: GEMCYHNCPKWQ*LQDGPPRHHLL Trigger: CAGAAGGTGGTGCCGTGGGGGTCCATCTTGAAGTCACTGCCACTTTGGGCAATTGTGGTAGCACATTTCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS CCA 72 bp | CTACCACAATTGCCCAAAGTGGCAGTGACTTCAAGATaGACCCCCACGGCACCACCTTCTGCGAAGAAAGCT | + |
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Preference number: 6 (lower is better) Translates to: LPQLPKVAVTSR*TPTAPPSAKKA Trigger: AGCTTTCTTCGCAGAAGGTGGTGCCGTGGGGGTCCATCTTGAAGTCACTGCCACTTTGGGCAATTGTGGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS CAA 90 bp | ATGCCCAAGAGGATGCCAGCATACGAAGGAGCGATATCCAGATGGTaGATGCTAAATCCAGAAGAGGCGAAGCCTCCCAGCGTCGTGGAT | + |
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Preference number: 6 (lower is better) Translates to: MPKRMPAYEGAISRW*MLNPEEAKPPSVVD Trigger: ATCCACGACGCTGGGAGGCTTCGCCTCTTCTGGATTTAGCATCAACCATCTGGATATCGCTCCTTCGTATGCTGGCATCCTCTTGGGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS GCA 72 bp | TTTCTGTGTCCGTGGTGGTCACTGAGAGCCCAGCTCTaGACTTCCCCTTTGGCAAACAGCGTGAAGAAAATG | + |
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Preference number: 6 (lower is better) Translates to: FLCPWWSLRAQL*TSPLANSVKKM Trigger: CATTTTCTTCACGCTGTTTGCCAAAGGGGAAGTGCAGAGCTGGGCTCTCAGTGACCACCACGGACACAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS CAA 72 bp | AGAACGAAGAAACCACAGAACGCCAAAATCGCTAAGTaGTACCGAGCAGAGCAGCACACTGGAGCCGCTTCG | + |
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Preference number: 6 (lower is better) Translates to: RTKKPQNAKIAK*YRAEQHTGAAS Trigger: CGAAGCGGCTCCAGTGTGCTGCTCTGCTCGGTACAACTTAGCGATTTTGGCGTTCTGTGGTTTCTTCGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS CAA 72 bp | AGGATGCCAGCATACGAAGGAGCGATATCCAGATGGTaGATGCTAAATCCAGAAGAGGCGAAGCCTCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RMPAYEGAISRW*MLNPEEAKPPS Trigger: GCTGGGAGGCTTCGCCTCTTCTGGATTTAGCATCAACCATCTGGATATCGCTCCTTCGTATGCTGGCATCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS CAA 72 bp | TCCCTCCGACCCTGCTGGCAATGTACCCACCGGGAATaGTGTGATTGTGGTGAACTTTTATGGGGGCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: SLRPCWQCTHRE*CDCGELLWGQN Trigger: ATTCTGCCCCCATAAAAGTTCACCACAATCACACAATTCCCGGTGGGTACATTGCCAGCAGGGTCGGAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117645.8 |
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| CDS CAA 90 bp | ATAAGGTGTAAAAAGACCAGTTGTAGGAGAAATGTGCTACCACAATaGCCCAAAGTGGCAGTGACTTCAAGATGGACCCCCACGGCACCA | + |
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Preference number: 6 (lower is better) Translates to: IRCKKTSCRRNVLPQ*PKVAVTSRWTPTAP Trigger: TGGTGCCGTGGGGGTCCATCTTGAAGTCACTGCCACTTTGGGCAATTGTGGTAGCACATTTCTCCTACAACTGGTCTTTTTACACCTTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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| CDS GCA 72 bp | CCCTTAAATAGTCAGCGGCTTGACCACAGAGGATCATaGATAACCAACAGCCAAAATAAGGCAATGCAGATA | + |
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Preference number: 6 (lower is better) Translates to: PLNSQRLDHRGS*ITNSQNKAMQI Trigger: TATCTGCATTGCCTTATTTTGGCTGTTGGTTATGCATGATCCTCTGTGGTCAAGCCGCTGACTATTTAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052441.12 ENSMUST00000117645.8 |
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