Pregenerated sensors for SLC17A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021336Ensembl transcript IDs: ENSMUST00000021769.16, ENSMUST00000110407.4, ENSMUST00000225797.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGCGGCTAGATCTGACCCAAGGCAGGGGCAGGAGGATTCCAGATaGGGCAAGGACCCCTACAGCAGTGAAGAGCTTCCTGATAGTGAC | + |
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Preference number: 1 (lower is better) Translates to: AAARSDPRQGQEDSR*GKDPYSSEELPDSD Trigger: GTCACTATCAGGAAGCTCTTCACTGCTGTAGGGGTCCTTGCCTCATCTGGAATCCTCCTGCCCCTGCCTTGGGTCAGATCTAGCCGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR CCA 90 bp | GCTGCTTTCTCCCTTATGGTGTTCTGTTGCCCCTACGCCCCAGGCTaGAAGGATGAGGTGGAGTCTGGAATGGAGGATCCTAGTCTGTCT | + |
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Preference number: 1 (lower is better) Translates to: AAFSLMVFCCPYAPG*KDEVESGMEDPSLS Trigger: AGACAGACTAGGATCCTCCATTCCAGACTCCACCTCATCCTTCCAGCCTGGGGCGTAGGGGCAACAGAACACCATAAGGGAGAAAGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR CCA 90 bp | TTATGGTGTTCTGTTGCCCCTACGCCCCAGGCTGGAAGGATGAGGTaGAGTCTGGAATGGAGGATCCTAGTCTGTCTGGGAGAGAGTACT | + |
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Preference number: 1 (lower is better) Translates to: LWCSVAPTPQAGRMR*SLEWRILVCLGEST Trigger: AGTACTCTCTCCCAGACAGACTAGGATCCTCCATTCCAGACTCCACCTCATCCTTCCAGCCTGGGGCGTAGGGGCAACAGAACACCATAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR TCA 90 bp | GCCCCCAAGGATGATGCAGACACAGCCAAACATGAACGGCAGGGCTaGCAGGATTCCACTATCTCGGAGGTTTGCTTGAAGTACAGAGCT | + |
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Preference number: 1 (lower is better) Translates to: APKDDADTAKHERQG*QDSTISEVCLKYRA Trigger: AGCTCTGTACTTCAAGCAAACCTCCGAGATAGTGGAATCCTGTCAGCCCTGCCGTTCATGTTTGGCTGTGTCTGCATCATCCTTGGGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR GCA 90 bp | TCAGAGATGGGTGAATGTCGGTTCCTTAGCCCAGTCCTGTACCTCTaGCCGGCTGAAGATGAGGTAGAAGAGCAGGCCTACTACATCAAT | + |
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Preference number: 1 (lower is better) Translates to: SEMGECRFLSPVLYL*PAEDEVEEQAYYIN Trigger: ATTGATGTAGTAGGCCTGCTCTTCTACCTCATCTTCAGCCGGGCAGAGGTACAGGACTGGGCTAAGGAACCGACATTCACCCATCTCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR TCA 90 bp | AGCCATGGGAGGGAAAAGGATGGATTGATGAAGATCGTGGATAGCTaGCTCTGTGCCTTAATGAGCCTTGGGTCAGTTCCAGGGTTGCCA | + |
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Preference number: 1 (lower is better) Translates to: SHGREKDGLMKIVDS*LCALMSLGSVPGLP Trigger: TGGCAACCCTGGAACTGACCCAAGGCTCATTAAGGCACAGAGTCAGCTATCCACGATCTTCATCAATCCATCCTTTTCCCTCCCATGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR TCA 90 bp | CCGGCTCACAAACATCCTGTTTTCCAGGCTGTCGGTTCTCTTTGCTaGCAGCTTAGAGTTCGTGGTATCATTCTCCTGTGGTTCCAACTC | + |
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Preference number: 1 (lower is better) Translates to: PAHKHPVFQAVGSLC*QLRVRGIILLWFQL Trigger: GAGTTGGAACCACAGGAGAATGATACCACGAACTCTAAGCTGTCAGCAAAGAGAACCGACAGCCTGGAAAACAGGATGTTTGTGAGCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| 3UTR TCA 90 bp | GCCAGCATACCGTGGAGCTATATCCAAGAAGTTAATGAGGGCTCCTaGATCACAGAGGCTGGCAAAGACAGAAGACAGTACCAAGAAGGC | + |
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Preference number: 1 (lower is better) Translates to: ASIPWSYIQEVNEGS*ITEAGKDRRQYQEG Trigger: GCCTTCTTGGTACTGTCTTCTGTCTTTGCCAGCCTCTGTGATTCAGGAGCCCTCATTAACTTCTTGGATATAGCTCCACGGTATGCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR TCA 90 bp | ACAGATGAGGGACCCAGGCTAAAGTGGTCAGAAAGAAGAAAGATGTaGATAGAACAGTGGACTCCAGAGAGTGCCTGGGTGGTTGGTGTT | + |
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Preference number: 1 (lower is better) Translates to: TDEGPRLKWSERRKM*IEQWTPESAWVVGV Trigger: AACACCAACCACCCAGGCACTCTCTGGAGTCCACTGTTCTATTCACATCTTTCTTCTTTCTGACCACTTTAGCCTGGGTCCCTCATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR CCA 90 bp | GTGGAGTCTGGAATGGAGGATCCTAGTCTGTCTGGGAGAGAGTACTaGCAGGGAGAAGGCCTTCTGTCTTTCTTAAACTATCTTAGCTTG | + |
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Preference number: 1 (lower is better) Translates to: VESGMEDPSLSGREY*QGEGLLSFLNYLSL Trigger: CAAGCTAAGATAGTTTAAGAAAGACAGAAGGCCTTCTCCCTGCCAGTACTCTCTCCCAGACAGACTAGGATCCTCCATTCCAGACTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR TCA 90 bp | CTGACAGGATTCCACTATCTCGGAGGTTTGCTTGAAGTACAGAGCTaGTATATGTGGGTGTATATGCCATTACTGTGGATAACAGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: LTGFHYLGGLLEVQS*YMWVYMPLLWITAS Trigger: ACTGGCTGTTATCCACAGTAATGGCATATACACCCACATATATCAGCTCTGTACTTCAAGCAAACCTCCGAGATAGTGGAATCCTGTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR TCA 90 bp | CTCACATACATTTTTAGGAGACATTTTACATCAAATGAGGCCTGGTaGACAATGGCTGCGATTGTAAGCATCAGAGAAACAGGCATAGGG | + |
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Preference number: 1 (lower is better) Translates to: LTYIFRRHFTSNEAW*TMAAIVSIRETGIG Trigger: CCCTATGCCTGTTTCTCTGATGCTTACAATCGCAGCCATTGTTCACCAGGCCTCATTTGATGTAAAATGTCTCCTAAAAATGTATGTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR GCA 90 bp | TGGCAGGGAGAAGGCCTTCTGTCTTTCTTAAACTATCTTAGCTTGTaGACATATCATTATTCAAATTGGACTTGTATGCATATACTTTAT | + |
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Preference number: 1 (lower is better) Translates to: WQGEGLLSFLNYLSL*TYHYSNWTCMHILY Trigger: ATAAAGTATATGCATACAAGTCCAATTTGAATAATGATATGTGCACAAGCTAAGATAGTTTAAGAAAGACAGAAGGCCTTCTCCCTGCCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTGGAAGGATGAGGTGGAGTCTGGAATGGAGGATCCTAGTCTGTCTGGGAGAAGACACAGCCAAACATaGACGGCAGGGCTGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: GWKDEVESGMEDPSLSGRRHSQT*TAGLTG Trigger: TCCTGTCAGCCCTGCCGTTCATGTTTGGCTGTGTCT...TCTCCCAGACAGACTAGGATCCTCCATTCCAGACTCCACCTCATCCTTCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR-3UTR CCA 90 bp | ACCCAAGGCAGGGGCAGGAGGATTCCAGATGAGGCAAGGACCCCTACAGCAGTGAACGTTGCTCAGAGATaGGTGAATGTCGGTTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: TQGRGRRIPDEARTPTAVNVAQR*VNVGSL Trigger: TAAGGAACCGACATTCACCCATCTCTGAGCAACGTT...CACTGCTGTAGGGGTCCTTGCCTCATCTGGAATCCTCCTGCCCCTGCCTTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAATGTCGGTTCCTTAGCCCAGTCCTGTACCTCTGCCCGGCTGAAGATGAGGCTTGCAATAATCCTTTaGGAAAGCCAGCATACCGTG | + |
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Preference number: 2 (lower is better) Translates to: VNVGSLAQSCTSARLKMRLAIIL*ESQHTV Trigger: CACGGTATGCTGGCTTTCTCAAAGGATTATTGCAAG...CCTCATCTTCAGCCGGGCAGAGGTACAGGACTGGGCTAAGGAACCGACATTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR CAA 90 bp | AGGTACTTGCTGGGTGGGTTCTTATCCAGGAAAGAAGAGTTTAACTaGTTAGGTCTTCCAAGGACTAAACGACCATCCCCACAGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: RYLLGGFLSRKEEFN*LGLPRTKRPSPQRG Trigger: CCCTCTCTGTGGGGATGGTCGTTTAGTCCTTGGAAGACCTAACAAGTTAAACTCTTCTTTCCTGGATAAGAACCCACCCAGCAAGTACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR-3UTR CCA 90 bp | TTTAACCTCCTCACTTGGCTACAGCTGCAGAACTTCCGGCTCACAAACATCCTGAACGTTGCTCAGAGATaGGTGAATGTCGGTTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: FNLLTWLQLQNFRLTNILNVAQR*VNVGSL Trigger: TAAGGAACCGACATTCACCCATCTCTGAGCAACGTT...CAGGATGTTTGTGAGCCGGAAGTTCTGCAGCTGTAGCCAAGTGAGGAGGTTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCAGGACCACCCAGAAGCAGATGGTCCTGGGCTATATAAGAATCTAGTGAAAGAGTGCCTGGGTGGTTaGTGTTCTTATTGCAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: GQDHPEADGPGLYKNLVKECLGG*CSYCRS Trigger: ACTTCTGCAATAAGAACACCAACCACCCAGGCACTC...TTTCACTAGATTCTTATATAGCCCAGGACCATCTGCTTCTGGGTGGTCCTGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR CAA 90 bp | GAATGCCTCATTTGCATGGAGAGGCATTCCAGGGATCCCAGGTACTaGCTGGGTGGGTTCTTATCCAGGAAAGAAGAGTTTAACTTGTTA | + |
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Preference number: 2 (lower is better) Translates to: ECLICMERHSRDPRY*LGGFLSRKEEFNLL Trigger: TAACAAGTTAAACTCTTCTTTCCTGGATAAGAACCCACCCAGCAAGTACCTGGGATCCCTGGAATGCCTCTCCATGCAAATGAGGCATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR-3UTR CCA 90 bp | CATCCTACACGCACCAAGAGCCACAGTAATTCTTTAACCTCCTCACTTGGCTACGCTTTAGCTGTCCAGTaGGCACAAAAGCAAGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: HPTRTKSHSNSLTSSLGYALAVQ*AQKQVF Trigger: AAAGACTTGCTTTTGTGCCCACTGGACAGCTAAAGC...GTAGCCAAGTGAGGAGGTTAAAGAATTACTGTGGCTCTTGGTGCGTGTAGGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| 3UTR-3UTR TCA 90 bp | ACCACTGAAAATCAGAACCTGATTATGTCCCTTCCCATTAAAATACCTCCACTGGGCTCCTACATGAAGTaGCCTTCAGATTCCAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: TTENQNLIMSLPIKIPPLGSYMK*PSDSSS Trigger: TGAGCTGGAATCTGAAGGTCACTTCATGTAGGAGCC...CAGTGGAGGTATTTTAATGGGAAGGGACATAATCAGGTTCTGATTTTCAGTGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR-3UTR CCA 90 bp | AGACTAAGACATAAGGGATTTGCACAAATCTACATACAGATGAGGGACCCAGGCCTGAATCACAGAGGCTaGCAAAGACAGAAGACAGTA | + |
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Preference number: 2 (lower is better) Translates to: RLRHKGFAQIYIQMRDPGLNHRG*QRQKTV Trigger: TACTGTCTTCTGTCTTTGCCAGCCTCTGTGATTCAG...GCCTGGGTCCCTCATCTGTATGTAGATTTGTGCAAATCCCTTATGTCTTAGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAGGATCCACATACAGAAAGCTGTCTGGAATGACTAGATTCTACTACTCCCCAAACTCTGAATCCTaGCTGATGAAAAATCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: KPGSTYRKLSGMTRFYYSPNSES*LMKNPA Trigger: TGCTGGATTTTTCATCAGTCAGGATTCAGAGTTTGG...GGAGTAGTAGAATCTAGTCATTCCAGACAGCTTTCTGTATGTGGATCCTGGCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR-3UTR GCA 90 bp | TTGTTATATGCAGGACCTAAAGATGATTGGTTAACAAACAAAAGACAGGGATTGGGTCAGTTCCAGGGTTaGCAAAGAGGGTGGTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: LLYAGPKDDWLTNKRQGLGQFQG*QRGWWC Trigger: ACACCACCACCCTCTTTGGCAACCCTGGAACTGACC...CAATCCCTGTCTTTTGTTTGTTAACCAATCATCTTTAGGTCCTGCATATAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCCAGGATCCACATACAGAAAGCTGTCTGGAATGACTAGATTCTACTACTCCCTTTTCTTTCCTTTGTaGAATCTCCAGGCATGGAAA | + |
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Preference number: 2 (lower is better) Translates to: KPGSTYRKLSGMTRFYYSLFFPL*NLQAWK Trigger: TTTCCATGCCTGGAGATTTCACAAAGGAAAGAAAAG...GGAGTAGTAGAATCTAGTCATTCCAGACAGCTTTCTGTATGTGGATCCTGGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| 3UTR-3UTR TCA 90 bp | AGACTAAGACATAAGGGATTTGCACAAATCTACATACAGATGAGGGACCCAGGCGAAAGAAGAAAGATGTaGATAGAACAGTGGACTCCA | + |
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Preference number: 2 (lower is better) Translates to: RLRHKGFAQIYIQMRDPGERRKM*IEQWTP Trigger: TGGAGTCCACTGTTCTATTCACATCTTTCTTCTTTC...GCCTGGGTCCCTCATCTGTATGTAGATTTGTGCAAATCCCTTATGTCTTAGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGTATAGAGGATTTGTAGAACCTGTGATTTCAGGAGCACACAGTTCTAAAGTCGGAGGATTTTCCTaGAGAGCAGAAAATCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: GKYRGFVEPVISGAHSSKVGGFS*RAENLP Trigger: TGGCAGATTTTCTGCTCTCCAGGAAAATCCTCCGAC...TTTAGAACTGTGTGCTCCTGAAATCACAGGTTCTACAAATCCTCTATACTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTTCTTGACCTCCATACTTCTAGAACCTCTCATAGCCCACTCTGTTCTTATTCTCCTTATTACATATTaGACAGCTATCACTACGCAC | + |
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Preference number: 2 (lower is better) Translates to: VFLTSILLEPLIAHSVLILLITY*TAITTH Trigger: GTGCGTAGTGATAGCTGTGCAATATGTAATAAGGAG...AATAAGAACAGAGTGGGCTATGAGAGGTTCTAGAAGTATGGAGGTCAAGAACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR-3UTR TCA 90 bp | GGAAATGAAGTGAAGCAAGCACGGGTCTCACATACATTTTTAGGAGACATTTTACTTGAAGTACAGAGCTaGTATATGTGGGTGTATATG | + |
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Preference number: 2 (lower is better) Translates to: GNEVKQARVSHTFLGDILLEVQS*YMWVYM Trigger: CATATACACCCACATATATCAGCTCTGTACTTCAAG...TAAAATGTCTCCTAAAAATGTATGTGAGACCCGTGCTTGCTTCACTTCATTTCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR CAA 90 bp | TACTGGCAGGGAGAAGGCCTTCTGTCTTTCTTAAACTATCTTAGCTaGTGCACATATCATTATTCAAATTGGACTTGTATGCATATACTT | + |
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Preference number: 2 (lower is better) Translates to: YWQGEGLLSFLNYLS*CTYHYSNWTCMHIL Trigger: AAGTATATGCATACAAGTCCAATTTGAATAATGATATGTGCACAAGCTAAGATAGTTTAAGAAAGACAGAAGGCCTTCTCCCTGCCAGTA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR CCA 72 bp | ACGCCCCAGGCTGGAAGGATGAGGTGGAGTCTGGAATaGAGGATCCTAGTCTGTCTGGGAGAGAGTACTGGC | + |
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Preference number: 3 (lower is better) Translates to: TPQAGRMRWSLE*RILVCLGESTG Trigger: GCCAGTACTCTCTCCCAGACAGACTAGGATCCTCCATTCCAGACTCCACCTCATCCTTCCAGCCTGGGGCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR CCA 72 bp | GCCAGCTGTGGTTCTGATGTGCTGCTTTCTCCCTTATaGTGTTCTGTTGCCCCTACGCCCCAGGCTGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: ASCGSDVLLSPL*CSVAPTPQAGR Trigger: CCTTCCAGCCTGGGGCGTAGGGGCAACAGAACACCATAAGGGAGAAAGCAGCACATCAGAACCACAGCTGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR GCA 72 bp | GGTGAATGTCGGTTCCTTAGCCCAGTCCTGTACCTCTaGCCGGCTGAAGATGAGGTAGAAGAGCAGGCCTAC | + |
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Preference number: 3 (lower is better) Translates to: GECRFLSPVLYL*PAEDEVEEQAY Trigger: GTAGGCCTGCTCTTCTACCTCATCTTCAGCCGGGCAGAGGTACAGGACTGGGCTAAGGAACCGACATTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR GCA 72 bp | AATGTGAGGTTATGTCCTACTACCTCCCCCAACCCATaGAATGGACCACCACTCCTGGGATCGCACTGGAAC | + |
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Preference number: 3 (lower is better) Translates to: NVRLCPTTSPNP*NGPPLLGSHWN Trigger: GTTCCAGTGCGATCCCAGGAGTGGTGGTCCATTGCATGGGTTGGGGGAGGTAGTAGGACATAACCTCACATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR GCA 72 bp | TATGCATGTTGGGGGCCAGCTGTGGTTCTGATGTGCTaGTTTCTCCCTTATGGTGTTCTGTTGCCCCTACGC | + |
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Preference number: 3 (lower is better) Translates to: YACWGPAVVLMC*FLPYGVLLPLR Trigger: GCGTAGGGGCAACAGAACACCATAAGGGAGAAAGCAGCACATCAGAACCACAGCTGGCCCCCAACATGCATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR CCA 72 bp | GTGTTTTTAGCTGGTGCAAGAGAATCCAGCCCATTGTaGTCAGGACCACCCAGAAGCAGATGGTCCTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: VFLAGARESSPL*SGPPRSRWSWA Trigger: AGCCCAGGACCATCTGCTTCTGGGTGGTCCTGACCACAATGGGCTGGATTCTCTTGCACCAGCTAAAAACAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR GCA 72 bp | TCGTGGTATCATTCTCCTGTGGTTCCAACTCGTCACTaGTGTACTTCGGGGCAAACTCTCCTCCAGTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: SWYHSPVVPTRH*CTSGQTLLQSH Trigger: ATGGGACTGGAGGAGAGTTTGCCCCGAAGTACAGCAGTGACGAGTTGGAACCACAGGAGAATGATACCACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| 3UTR GCA 72 bp | TGGTATGCATGTTGGGGGCCAGCTGTGGTTCTGATGTaGTGCTTTCTCCCTTATGGTGTTCTGTTGCCCCTA | + |
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Preference number: 3 (lower is better) Translates to: WYACWGPAVVLM*CFLPYGVLLPL Trigger: TAGGGGCAACAGAACACCATAAGGGAGAAAGCAGCACATCAGAACCACAGCTGGCCCCCAACATGCATACCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR GCA 72 bp | CATCTTCTGGCCCTTATGGGCACTGCAAACATATGGTaGCTAGACATGCAGGCAGGCAAAACCCTTGTATGC | + |
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Preference number: 3 (lower is better) Translates to: HLLALMGTANIW*LDMQAGKTLVC Trigger: GCATACAAGGGTTTTGCCTGCCTGCATGTCTAGGCACCATATGTTTGCAGTGCCCATAAGGGCCAGAAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR GCA 72 bp | AACAACCACCATCCATCTTCTGGCCCTTATGGGCACTaGAAACATATGGTGCCTAGACATGCAGGCAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: NNHHPSSGPYGH*KHMVPRHAGRQ Trigger: TTGCCTGCCTGCATGTCTAGGCACCATATGTTTGCAGTGCCCATAAGGGCCAGAAGATGGATGGTGGTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR-3UTR CAA 90 bp | CTAGTGAAATGTGAGGTTATGTCCTACTACCTCCCCCAACCCATGCAATGGACCCAGATTCCAGCTCAATaGATGCTGTGTAATGGCGGC | + |
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Preference number: 3 (lower is better) Translates to: LVKCEVMSYYLPQPMQWTQIPAQ*MLCNGG Trigger: GCCGCCATTACACAGCATCAATTGAGCTGGAATCTG...GGTCCATTGCATGGGTTGGGGGAGGTAGTAGGACATAACCTCACATTTCACTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR GCA 72 bp | GACTCCAGAGAGTGCCTGGGTGGTTGGTGTTCTTATTaGAGAAGTGGTTTTGATCCAAAGCCAGGATCCACA | + |
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Preference number: 3 (lower is better) Translates to: DSRECLGGWCSY*RSGFDPKPGST Trigger: TGTGGATCCTGGCTTTGGATCAAAACCACTTCTGCAATAAGAACACCAACCACCCAGGCACTCTCTGGAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR CCA 72 bp | GCATGGAGAGGCATTCCAGGGATCCCAGGTACTTGCTaGGTGGGTTCTTATCCAGGAAAGAAGAGTTTAACT | + |
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Preference number: 3 (lower is better) Translates to: AWRGIPGIPGTC*VGSYPGKKSLT Trigger: AGTTAAACTCTTCTTTCCTGGATAAGAACCCACCCAGCAAGTACCTGGGATCCCTGGAATGCCTCTCCATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR CCA 72 bp | ATCCATCTTCTGGCCCTTATGGGCACTGCAAACATATaGTGCCTAGACATGCAGGCAGGCAAAACCCTTGTA | + |
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Preference number: 3 (lower is better) Translates to: IHLLALMGTANI*CLDMQAGKTLV Trigger: TACAAGGGTTTTGCCTGCCTGCATGTCTAGGCACCATATGTTTGCAGTGCCCATAAGGGCCAGAAGATGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR TCA 72 bp | CCGTGGAGCTATATCCAAGAAGTTAATGAGGGCTCCTaGATCACAGAGGCTGGCAAAGACAGAAGACAGTAC | + |
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Preference number: 3 (lower is better) Translates to: PWSYIQEVNEGS*ITEAGKDRRQY Trigger: GTACTGTCTTCTGTCTTTGCCAGCCTCTGTGATTCAGGAGCCCTCATTAACTTCTTGGATATAGCTCCACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR GCA 72 bp | TTTGCATGGAGAGGCATTCCAGGGATCCCAGGTACTTaGTGGGTGGGTTCTTATCCAGGAAAGAAGAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: FAWRGIPGIPGT*WVGSYPGKKSL Trigger: TAAACTCTTCTTTCCTGGATAAGAACCCACCCAGCAAGTACCTGGGATCCCTGGAATGCCTCTCCATGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| 3UTR CCA 72 bp | GGAATGGAGGATCCTAGTCTGTCTGGGAGAGAGTACTaGCAGGGAGAAGGCCTTCTGTCTTTCTTAAACTAT | + |
|
Preference number: 3 (lower is better) Translates to: GMEDPSLSGREY*QGEGLLSFLNY Trigger: ATAGTTTAAGAAAGACAGAAGGCCTTCTCCCTGCCAGTACTCTCTCCCAGACAGACTAGGATCCTCCATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
||
| 3UTR TCA 72 bp | AAACATCCTGTTTTCCAGGCTGTCGGTTCTCTTTGCTaGCAGCTTAGAGTTCGTGGTATCATTCTCCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KHPVFQAVGSLC*QLRVRGIILLW Trigger: CCACAGGAGAATGATACCACGAACTCTAAGCTGTCAGCAAAGAGAACCGACAGCCTGGAAAACAGGATGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| 3UTR TCA 72 bp | CCTGGGTGGTTGGTGTTCTTATTGCAGAAGTGGTTTTaGTCCAAAGCCAGGATCCACATACAGAAAGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PGWLVFLLQKWF*SKARIHIQKAV Trigger: GACAGCTTTCTGTATGTGGATCCTGGCTTTGGATCAAAACCACTTCTGCAATAAGAACACCAACCACCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| 3UTR TCA 72 bp | AGGGCTGACAGGATTCCACTATCTCGGAGGTTTGCTTaGAGTACAGAGCTGATATATGTGGGTGTATATGCC | + |
|
Preference number: 3 (lower is better) Translates to: RADRIPLSRRFA*STELIYVGVYA Trigger: GGCATATACACCCACATATATCAGCTCTGTACTTCAAGCAAACCTCCGAGATAGTGGAATCCTGTCAGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
||
| 3UTR TCA 72 bp | AGGGAAAAGGATGGATTGATGAAGATCGTGGATAGCTaGCTCTGTGCCTTAATGAGCCTTGGGTCAGTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: REKDGLMKIVDS*LCALMSLGSVP Trigger: TGGAACTGACCCAAGGCTCATTAAGGCACAGAGTCAGCTATCCACGATCTTCATCAATCCATCCTTTTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
||
| 3UTR TCA 72 bp | ATTGTAAGCATCAGAGAAACAGGCATAGGGTATCCATaGTGCTGCAAAGCAGTACCTGAGGAGATCAGAGAC | + |
|
Preference number: 3 (lower is better) Translates to: IVSIRETGIGYP*CCKAVPEEIRD Trigger: GTCTCTGATCTCCTCAGGTACTGCTTTGCAGCATCATGGATACCCTATGCCTGTTTCTCTGATGCTTACAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
||
| 3UTR GCA 72 bp | CACAGTAATTCTTTAACCTCCTCACTTGGCTACAGCTaGAGAACTTCCGGCTCACAAACATCCTGTTTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HSNSLTSSLGYS*RTSGSQTSCFP Trigger: TGGAAAACAGGATGTTTGTGAGCCGGAAGTTCTGCAGCTGTAGCCAAGTGAGGAGGTTAAAGAATTACTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| 3UTR GCA 72 bp | GCCCACTCTGTTCTTATTCACCCGATTTTTCTCTCCTaGACCAAACCTTTCTATATGCTGCAGATTTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: AHSVLIHPIFLS*TKPFYMLQIFP Trigger: TGGGAAAATCTGCAGCATATAGAAAGGTTTGGTGCAGGAGAGAAAAATCGGGTGAATAAGAACAGAGTGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
||
| 3UTR TCA 72 bp | ATTTTTAGGAGACATTTTACATCAAATGAGGCCTGGTaGACAATGGCTGCGATTGTAAGCATCAGAGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: IFRRHFTSNEAW*TMAAIVSIRET Trigger: TGTTTCTCTGATGCTTACAATCGCAGCCATTGTTCACCAGGCCTCATTTGATGTAAAATGTCTCCTAAAAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
||
| 3UTR TCA 72 bp | AGGGGAGGACAAGGACTAAATATGAAACTTGGAGAGTaGAAAGAAGCTTTCAGGGTAATTGTGAAATCATTG | + |
|
Preference number: 3 (lower is better) Translates to: RGGQGLNMKLGE*KEAFRVIVKSL Trigger: CAATGATTTCACAATTACCCTGAAAGCTTCTTTTCACTCTCCAAGTTTCATATTTAGTCCTTGTCCTCCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
||
| 3UTR GCA 72 bp | GCTTGTGCACATATCATTATTCAAATTGGACTTGTATaGATATACTTTATTCAGGGGAGGACAAGGACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: ACAHIIIQIGLV*IYFIQGRTRTK Trigger: TTTAGTCCTTGTCCTCCCCTGAATAAAGTATATGCATACAAGTCCAATTTGAATAATGATATGTGCACAAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
||
| 3UTR GCA 72 bp | GAAGGCCTTCTGTCTTTCTTAAACTATCTTAGCTTGTaGACATATCATTATTCAAATTGGACTTGTATGCAT | + |
|
Preference number: 3 (lower is better) Translates to: EGLLSFLNYLSL*TYHYSNWTCMH Trigger: ATGCATACAAGTCCAATTTGAATAATGATATGTGCACAAGCTAAGATAGTTTAAGAAAGACAGAAGGCCTTC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
||
| CDS-3UTR TCA 90 bp | TGGTTCCAACTCGTCACTGCTGTACTTCGGGGCAAACTCTCCTCCAGTCCCATGGGCCATCCGAGGGCCTaGCAAATAAGACCACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: WFQLVTAVLRGKLSSSPMGHPRA*QIRPPA Trigger: TGCTGGTGGTCTTATTTGTCAGGCCCTCGGATGGCC...CATGGGACTGGAGGAGAGTTTGCCCCGAAGTACAGCAGTGACGAGTTGGAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| CDS-3UTR GCA 90 bp | GGTTCCAACTCGTCACTGCTGTACTTCGGGGCAAACTCTCCTCCAGTCCCATGGATGAAGGCCAGACCATaGCGCAGTGAGCAGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSNSSLLYFGANSPPVPWMKARP*RSEQKP Trigger: AGGCTTCTGCTCACTGCGGCATGGTCTGGCCTTCAT...CCATGGGACTGGAGGAGAGTTTGCCCCGAAGTACAGCAGTGACGAGTTGGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| CDS-3UTR CCA 90 bp | GTGAATGTCGGTTCCTTAGCCCAGTCCTGTACCTCTGCCCGGCTGAAGATGAGGTTGACTCCTTTCCTGTaGGGGAGCCCATTTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: VNVGSLAQSCTSARLKMRLTPFL*GSPFGP Trigger: TGGGCCAAATGGGCTCCCCCACAGGAAAGGAGTCAA...CCTCATCTTCAGCCGGGCAGAGGTACAGGACTGGGCTAAGGAACCGACATTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110407.4 |
||
| CDS-3UTR TCA 90 bp | TGGTTCCAACTCGTCACTGCTGTACTTCGGGGCAAACTCTCCTCCAGTCCCATGAGACACAGCCAAACATaGACGGCAGGGCTGACAGGA | + |
|
Preference number: 4 (lower is better) Translates to: WFQLVTAVLRGKLSSSPMRHSQT*TAGLTG Trigger: TCCTGTCAGCCCTGCCGTTCATGTTTGGCTGTGTCT...CATGGGACTGGAGGAGAGTTTGCCCCGAAGTACAGCAGTGACGAGTTGGAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110407.4 |
||
| CDS-3UTR CCA 90 bp | ACCCAAGGCAGGGGCAGGAGGATTCCAGATGAGGCAAGGACCCCTACAGCAGTGTCATTCCAGACATCCTaGGAGTTAGTGGGAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TQGRGRRIPDEARTPTAVSFQTS*ELVGGL Trigger: AAGACCTCCCACTAACTCCCAGGATGTCTGGAATGA...CACTGCTGTAGGGGTCCTTGCCTCATCTGGAATCCTCCTGCCCCTGCCTTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
||
| CDS-3UTR TCA 90 bp | TGGTTCCAACTCGTCACTGCTGTACTTCGGGGCAAACTCTCCTCCAGTCCCATGGAGCCAGTGAGCATGTaGTGTATCTCCTCTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: WFQLVTAVLRGKLSSSPMEPVSM*CISSHQ Trigger: CTGGTGAGAGGAGATACATCACATGCTCACTGGCTC...CATGGGACTGGAGGAGAGTTTGCCCCGAAGTACAGCAGTGACGAGTTGGAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| CDS-3UTR CCA 90 bp | AACGTTGCTCAGAGATGGGTGAATGTCGGTTCCTTAGCCCAGTCCTGTACCTCTGTGGGGGAGCCCATTTaGCCCACAGTGAGTACTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NVAQRWVNVGSLAQSCTSVGEPI*PTVSTD Trigger: GTCAGTACTCACTGTGGGCCAAATGGGCTCCCCCAC...AGAGGTACAGGACTGGGCTAAGGAACCGACATTCACCCATCTCTGAGCAACGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110407.4 |
||
| CDS-3UTR TCA 90 bp | GTGAATGTCGGTTCCTTAGCCCAGTCCTGTACCTCTGCCCGGCTGAAGATGAGGGTTAATACCATAACCTaGGCCATGCCTTGGATGACC | + |
|
Preference number: 4 (lower is better) Translates to: VNVGSLAQSCTSARLKMRVNTIT*AMPWMT Trigger: GGTCATCCAAGGCATGGCTCAGGTTATGGTATTAAC...CCTCATCTTCAGCCGGGCAGAGGTACAGGACTGGGCTAAGGAACCGACATTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110407.4 |
||
| CDS-3UTR CCA 90 bp | GTGAATGTCGGTTCCTTAGCCCAGTCCTGTACCTCTGCCCGGCTGAAGATGAGGCTGTGGTATTCACCATaGCGGTTATGGCAAAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VNVGSLAQSCTSARLKMRLWYSP*RLWQSS Trigger: TGAGCTTTGCCATAACCGCCATGGTGAATACCACAG...CCTCATCTTCAGCCGGGCAGAGGTACAGGACTGGGCTAAGGAACCGACATTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTTCCAACTCGTCACTGCTGTACTTCGGGGCAAACTCTCCTCCAGTCCCATGGCTGGATGCTACTGTaGTATTCACCATGGCGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: VVPTRHCCTSGQTLLQSHGWMLL*YSPWRL Trigger: TAACCGCCATGGTGAATACCACAGTAGCATCCAGCC...ATGGGACTGGAGGAGAGTTTGCCCCGAAGTACAGCAGTGACGAGTTGGAACCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| 3UTR CAA 72 bp | CTCTGTGCCTTAATGAGCCTTGGGTCAGTTCCAGGGTaGCCAAAGAGGGTGGTGGTGTCACATCTAAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCALMSLGSVPG*PKRVVVSHLSS Trigger: GGAACTTAGATGTGACACCACCACCCTCTTTGGCAACCCTGGAACTGACCCAAGGCTCATTAAGGCACAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
||
| CDS-3UTR TCA 90 bp | GGTTCCAACTCGTCACTGCTGTACTTCGGGGCAAACTCTCCTCCAGTCCCATGGAGCAGAAGCCTTTCTTaGAGGATTGTTCTTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSNSSLLYFGANSPPVPWSRSLS*RIVLGS Trigger: TGACCCAAGAACAATCCTTCAAGAAAGGCTTCTGCT...CCATGGGACTGGAGGAGAGTTTGCCCCGAAGTACAGCAGTGACGAGTTGGAACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| CDS-3UTR GCA 90 bp | GTGGTTCCAACTCGTCACTGCTGTACTTCGGGGCAAACTCTCCTCCAGTCCCATAATGTCTCCCTCTCTTaGTTTCAGGTCTGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VVPTRHCCTSGQTLLQSHNVSLS*FQVCSS Trigger: ACTGGAGCAGACCTGAAAGCAAGAGAGGGAGACATT...ATGGGACTGGAGGAGAGTTTGCCCCGAAGTACAGCAGTGACGAGTTGGAACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| CDS-3UTR GCA 90 bp | CAACTCGTCACTGCTGTACTTCGGGGCAAACTCTCCTCCAGTCCCATGGCAACATACTCCAGCATCAGCTaGCAGTGGAATGAAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: QLVTAVLRGKLSSSPMATYSSIS*QWNEES Trigger: ACTCTCTTCATTCCACTGGCAGCTGATGCTGGAGTA...TGTTGCCATGGGACTGGAGGAGAGTTTGCCCCGAAGTACAGCAGTGACGAGTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTTCCAACTCGTCACTGCTGTACTTCGGGGCAAACTCTCCTCCAGTCCCATTCATTCCAGACATCCTaGGAGTTAGTGGGAGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VVPTRHCCTSGQTLLQSHSFQTS*ELVGGL Trigger: AAGACCTCCCACTAACTCCCAGGATGTCTGGAATGA...ATGGGACTGGAGGAGAGTTTGCCCCGAAGTACAGCAGTGACGAGTTGGAACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| CDS-3UTR CCA 90 bp | TGGTTCCAACTCGTCACTGCTGTACTTCGGGGCAAACTCTCCTCCAGTCCCATGGTCGGAGGATTTTCCTaGAGAGCAGAAAATCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WFQLVTAVLRGKLSSSPMVGGFS*RAENLP Trigger: TGGCAGATTTTCTGCTCTCCAGGAAAATCCTCCGAC...CATGGGACTGGAGGAGAGTTTGCCCCGAAGTACAGCAGTGACGAGTTGGAACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110407.4 |
||
| CDS-3UTR CCA 90 bp | GTGAATGTCGGTTCCTTAGCCCAGTCCTGTACCTCTGCCCGGCTGAAGATGAGGTTGAAGGATTGTTCTTaGGTCATGTTGTCACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VNVGSLAQSCTSARLKMRLKDCS*VMLSLG Trigger: TCCCAGTGACAACATGACCCAAGAACAATCCTTCAA...CCTCATCTTCAGCCGGGCAGAGGTACAGGACTGGGCTAAGGAACCGACATTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| 3UTR CAA 72 bp | AATGTGTTTTTAGCTGGTGCAAGAGAATCCAGCCCATaGTGGTCAGGACCACCCAGAAGCAGATGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: NVFLAGARESSP*WSGPPRSRWSW Trigger: CCAGGACCATCTGCTTCTGGGTGGTCCTGACCACAATGGGCTGGATTCTCTTGCACCAGCTAAAAACACATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
||
| CDS-3UTR TCA 90 bp | TCTTTAACCTCCTCACTTGGCTACAGCTGCAGAACTTCCGGCTCACAAACATCCTTTCTGTGGAAGCATTaGGCTGGCTGGATGCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: SLTSSLGYSCRTSGSQTSFLWKH*AGWMLL Trigger: CAGTAGCATCCAGCCAGCTCAATGCTTCCACAGAAA...GGATGTTTGTGAGCCGGAAGTTCTGCAGCTGTAGCCAAGTGAGGAGGTTAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| CDS-3UTR GCA 90 bp | TGGTTCCAACTCGTCACTGCTGTACTTCGGGGCAAACTCTCCTCCAGTCCCATGACTATCTCGGAGGTTTaGTTGAAGTACAGAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: WFQLVTAVLRGKLSSSPMTISEV*LKYRAD Trigger: ATCAGCTCTGTACTTCAAGCAAACCTCCGAGATAGT...CATGGGACTGGAGGAGAGTTTGCCCCGAAGTACAGCAGTGACGAGTTGGAACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110407.4 |
||
| CDS-3UTR TCA 90 bp | AGTAATTCTTTAACCTCCTCACTTGGCTACAGCTGCAGAACTTCCGGCTCACAATACAGAGATGCAAGATaGAGGCCAGACCATGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: SNSLTSSLGYSCRTSGSQYRDAR*RPDHAA Trigger: TGCGGCATGGTCTGGCCTTCATCTTGCATCTCTGTA...TTGTGAGCCGGAAGTTCTGCAGCTGTAGCCAAGTGAGGAGGTTAAAGAATTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| CDS-3UTR TCA 90 bp | TCTTTAACCTCCTCACTTGGCTACAGCTGCAGAACTTCCGGCTCACAAACATCCGCCCACAGTGAGTACTaGCCTGTTAATACCATAACC | + |
|
Preference number: 4 (lower is better) Translates to: SLTSSLGYSCRTSGSQTSAHSEY*PVNTIT Trigger: GGTTATGGTATTAACAGGTCAGTACTCACTGTGGGC...GGATGTTTGTGAGCCGGAAGTTCTGCAGCTGTAGCCAAGTGAGGAGGTTAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110407.4 |
||
| CDS-3UTR TCA 90 bp | GTGTTCTTGACCTCCATACTTCTAGAACCTCTCATAGCCCACTCTGTTCTTATTGGCCATCCGAGGGCCTaGCAAATAAGACCACCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFLTSILLEPLIAHSVLIGHPRA*QIRPPA Trigger: TGCTGGTGGTCTTATTTGTCAGGCCCTCGGATGGCC...AATAAGAACAGAGTGGGCTATGAGAGGTTCTAGAAGTATGGAGGTCAAGAACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
||
| CDS-3UTR TCA 90 bp | CAACTCGTCACTGCTGTACTTCGGGGCAAACTCTCCTCCAGTCCCATGGCAACATACATCAATAGCAGCTaGCTGATGAAAAATCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QLVTAVLRGKLSSSPMATYINSS*LMKNPA Trigger: TGCTGGATTTTTCATCAGTCAGCTGCTATTGATGTA...TGTTGCCATGGGACTGGAGGAGAGTTTGCCCCGAAGTACAGCAGTGACGAGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110407.4 |
||
| CDS-3UTR GCA 90 bp | AAGCCAGGATCCACATACAGAAAGCTGTCTGGAATGACTAGATTCTACTACTCCATGAAGGCCAGACCATaGCGCAGTGAGCAGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPGSTYRKLSGMTRFYYSMKARP*RSEQKP Trigger: AGGCTTCTGCTCACTGCGGCATGGTCTGGCCTTCAT...GGAGTAGTAGAATCTAGTCATTCCAGACAGCTTTCTGTATGTGGATCCTGGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| CDS-3UTR CCA 90 bp | TGTAAGCATCAGAGAAACAGGCATAGGGTATCCATGATGCTGCAAAGCAGTACCGGCTGGATGCTACTGTaGTATTCACCATGGCGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: CKHQRNRHRVSMMLQSSTGWMLL*YSPWRL Trigger: TAACCGCCATGGTGAATACCACAGTAGCATCCAGCC...GGTACTGCTTTGCAGCATCATGGATACCCTATGCCTGTTTCTCTGATGCTTACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
||
| CDS-3UTR CCA 90 bp | TTTAACCTCCTCACTTGGCTACAGCTGCAGAACTTCCGGCTCACAAACATCCTGAAAGGGGTGATTCTGTaGGTCATCATATACGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FNLLTWLQLQNFRLTNILKGVIL*VIIYER Trigger: CCTCTCGTATATGATGACCCACAGAATCACCCCTTT...CAGGATGTTTGTGAGCCGGAAGTTCTGCAGCTGTAGCCAAGTGAGGAGGTTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| CDS-3UTR CCA 90 bp | ATCACTAACGTTGCTCAGAGATGGGTGAATGTCGGTTCCTTAGCCCAGTCCTGTAAAGGGGTGATTCTGTaGGTCATCATATACGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ITNVAQRWVNVGSLAQSCKGVIL*VIIYER Trigger: CCTCTCGTATATGATGACCCACAGAATCACCCCTTT...ACAGGACTGGGCTAAGGAACCGACATTCACCCATCTCTGAGCAACGTTAGTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTAACCTCCTCACTTGGCTACAGCTGCAGAACTTCCGGCTCACAAACATCCCTGAATCACAGAGGCTaGCAAAGACAGAAGACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLTSSLGYSCRTSGSQTSLNHRG*QRQKTV Trigger: TACTGTCTTCTGTCTTTGCCAGCCTCTGTGATTCAG...GGATGTTTGTGAGCCGGAAGTTCTGCAGCTGTAGCCAAGTGAGGAGGTTAAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110407.4 |
||
| CDS-3UTR TCA 90 bp | TTTTCAGTTAGACATCCTACACGCACCAAGAGCCACAGTAATTCTTTAACCTCCCAGCTGCCAGTGGAATaGAGAGAGTCAGGACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: FSVRHPTRTKSHSNSLTSQLPVE*RESGLK Trigger: CTTCAGTCCTGACTCTCTTCATTCCACTGGCAGCTG...GGAGGTTAAAGAATTACTGTGGCTCTTGGTGCGTGTAGGATGTCTAACTGAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| 3UTR CAA 72 bp | GCCTGGGTGGTTGGTGTTCTTATTGCAGAAGTGGTTTaGATCCAAAGCCAGGATCCACATACAGAAAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AWVVGVLIAEVV*IQSQDPHTESC Trigger: ACAGCTTTCTGTATGTGGATCCTGGCTTTGGATCAAAACCACTTCTGCAATAAGAACACCAACCACCCAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| CDS-3UTR TCA 90 bp | CTATTTTCAGTTAGACATCCTACACGCACCAAGAGCCACAGTAATTCTTTAACCTACAGAGATGCAAGATaGAGGCCAGACCATGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LFSVRHPTRTKSHSNSLTYRDAR*RPDHAA Trigger: TGCGGCATGGTCTGGCCTTCATCTTGCATCTCTGTA...GGTTAAAGAATTACTGTGGCTCTTGGTGCGTGTAGGATGTCTAACTGAAAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
||
| 3UTR CAA 72 bp | CTGGGTGGGTTCTTATCCAGGAAAGAAGAGTTTAACTaGTTAGGTCTTCCAAGGACTAAACGACCATCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGGFLSRKEEFN*LGLPRTKRPSP Trigger: TGGGGATGGTCGTTTAGTCCTTGGAAGACCTAACAAGTTAAACTCTTCTTTCCTGGATAAGAACCCACCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
||
| 3UTR CAA 72 bp | CATTGGTTAGAGTTTAAAGTACTGGGAATGCCTCATTaGCATGGAGAGGCATTCCAGGGATCCCAGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: HWLEFKVLGMPH*HGEAFQGSQVL Trigger: AAGTACCTGGGATCCCTGGAATGCCTCTCCATGCAAATGAGGCATTCCCAGTACTTTAAACTCTAACCAATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
||
| 3UTR CAA 72 bp | CTAAGAAGACTAACTGTTCTTCCAGAGGACCTGGGTTaGATTCCCACCATGAACATGGCAACTAACAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LRRLTVLPEDLG*IPTMNMATNNH Trigger: GTGGTTGTTAGTTGCCATGTTCATGGTGGGAATCAAACCCAGGTCCTCTGGAAGAACAGTTAGTCTTCTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
||
| CDS-3UTR TCA 90 bp | ATTGCTCTTCATCCTGACTATTTTCAGTTAGACATCCTACACGCACCAAGAGCCAGCAGAAGCCTTTCTTaGAGGATTGTTCTTGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IALHPDYFQLDILHAPRASRSLS*RIVLGS Trigger: TGACCCAAGAACAATCCTTCAAGAAAGGCTTCTGCT...GGCTCTTGGTGCGTGTAGGATGTCTAACTGAAAATAGTCAGGATGAAGAGCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS-3UTR GCA 90 bp | AAGCCAGGATCCACATACAGAAAGCTGTCTGGAATGACTAGATTCTACTACTCCGGAGCCTTAGATTCCTaGAGTGTTTCATTCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KPGSTYRKLSGMTRFYYSGALDS*SVSFQT Trigger: TGTCTGGAATGAAACACTGCAGGAATCTAAGGCTCC...GGAGTAGTAGAATCTAGTCATTCCAGACAGCTTTCTGTATGTGGATCCTGGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS-3UTR GCA 90 bp | ACCACTGAAAATCAGAACCTGATTATGTCCCTTCCCATTAAAATACCTCCACTGTACTCCAGCATCAGCTaGCAGTGGAATGAAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TTENQNLIMSLPIKIPPLYSSIS*QWNEES Trigger: ACTCTCTTCATTCCACTGGCAGCTGATGCTGGAGTA...CAGTGGAGGTATTTTAATGGGAAGGGACATAATCAGGTTCTGATTTTCAGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| CDS-3UTR CCA 90 bp | AAGCCAGGATCCACATACAGAAAGCTGTCTGGAATGACTAGATTCTACTACTCCTTGAAGGATTGTTCTTaGGTCATGTTGTCACTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KPGSTYRKLSGMTRFYYSLKDCS*VMLSLG Trigger: TCCCAGTGACAACATGACCCAAGAACAATCCTTCAA...GGAGTAGTAGAATCTAGTCATTCCAGACAGCTTTCTGTATGTGGATCCTGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS-3UTR CCA 90 bp | ATTGCTCTTCATCCTGACTATTTTCAGTTAGACATCCTACACGCACCAAGAGCCTCACCATGGCGGTTATaGCAAAGCTCAAGTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: IALHPDYFQLDILHAPRASPWRL*QSSSSF Trigger: AAATGAACTTGAGCTTTGCCATAACCGCCATGGTGA...GGCTCTTGGTGCGTGTAGGATGTCTAACTGAAAATAGTCAGGATGAAGAGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS-3UTR CCA 90 bp | AAGCCAGGATCCACATACAGAAAGCTGTCTGGAATGACTAGATTCTACTACTCCAAAGCCAGCATACCGTaGAGCTATATCCAAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KPGSTYRKLSGMTRFYYSKASIP*SYIQEV Trigger: AACTTCTTGGATATAGCTCCACGGTATGCTGGCTTT...GGAGTAGTAGAATCTAGTCATTCCAGACAGCTTTCTGTATGTGGATCCTGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110407.4 |
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| 3UTR CAA 72 bp | CTTTTTCCCTTTACTTTATTAGCTTTACCTGTCAGCTaGACACAGCTTAGAGCTACCTGCAAAGGGAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LFPFTLLALPVS*TQLRATCKGSL Trigger: GAGACTCCCTTTGCAGGTAGCTCTAAGCTGTGTCAAGCTGACAGGTAAAGCTAATAAAGTAAAGGGAAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| CDS-3UTR TCA 90 bp | TATATGCCATTACTGTGGATAACAGCCAGTATTCACAGAAGTAAGAAACTACAACAGCTGCCAGTGGAATaGAGAGAGTCAGGACTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: YMPLLWITASIHRSKKLQQLPVE*RESGLK Trigger: CTTCAGTCCTGACTCTCTTCATTCCACTGGCAGCTG...TTGTAGTTTCTTACTTCTGTGAATACTGGCTGTTATCCACAGTAATGGCATATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| CDS-3UTR TCA 90 bp | ATTGCTCTTCATCCTGACTATTTTCAGTTAGACATCCTACACGCACCAAGAGCCCTTGAAGTACAGAGCTaGTATATGTGGGTGTATATG | + |
|
Preference number: 4 (lower is better) Translates to: IALHPDYFQLDILHAPRALEVQS*YMWVYM Trigger: CATATACACCCACATATATCAGCTCTGTACTTCAAG...GGCTCTTGGTGCGTGTAGGATGTCTAACTGAAAATAGTCAGGATGAAGAGCAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110407.4 |
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| CDS-3UTR CCA 90 bp | CTATTTTCAGTTAGACATCCTACACGCACCAAGAGCCACAGTAATTCTTTAACCTCACCATGGCGGTTATaGCAAAGCTCAAGTTCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LFSVRHPTRTKSHSNSLTSPWRL*QSSSSF Trigger: AAATGAACTTGAGCTTTGCCATAACCGCCATGGTGA...GGTTAAAGAATTACTGTGGCTCTTGGTGCGTGTAGGATGTCTAACTGAAAATAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS-3UTR GCA 90 bp | TATATGCCATTACTGTGGATAACAGCCAGTATTCACAGAAGTAAGAAACTACAAAATGTCTCCCTCTCTTaGTTTCAGGTCTGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YMPLLWITASIHRSKKLQNVSLS*FQVCSS Trigger: ACTGGAGCAGACCTGAAAGCAAGAGAGGGAGACATT...TTGTAGTTTCTTACTTCTGTGAATACTGGCTGTTATCCACAGTAATGGCATATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| CDS-3UTR CAA 90 bp | GTGGTTCCAACTCGTCACTGCTGTACTTCGGGGCAAACTCTCCTCCAGTCCCATGGAAGGTCCCAAGCATaGACCCTGAGCCATGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VVPTRHCCTSGQTLLQSHGRSQA*TLSHAL Trigger: CAAGGCATGGCTCAGGGTCAATGCTTGGGACCTTCC...ATGGGACTGGAGGAGAGTTTGCCCCGAAGTACAGCAGTGACGAGTTGGAACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| CDS TCA 90 bp | AGGAAGGTCCCAAGCATTGACCCTGATGCAGCGATGGTGATGAGTTaGCTCCTTTCCTGTGGGGGAGCCCATTTGGCCCACAGTGAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RKVPSIDPDAAMVMS*LLSCGGAHLAHSEY Trigger: GTACTCACTGTGGGCCAAATGGGCTCCCCCACAGGAAAGGAGTCAACTCATCACCATCGCTGCATCAGGGTCAATGCTTGGGACCTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 |
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| CDS-3UTR CAA 90 bp | GAATGTCGGTTCCTTAGCCCAGTCCTGTACCTCTGCCCGGCTGAAGATGAGGTAAGCGATGGTGATGAGTaGACTCCTTTCCTGTGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ECRFLSPVLYLCPAEDEVSDGDE*TPFLWG Trigger: CCCCCACAGGAAAGGAGTCAACTCATCACCATCGCT...TACCTCATCTTCAGCCGGGCAGAGGTACAGGACTGGGCTAAGGAACCGACATTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110407.4 |
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| CDS CCA 90 bp | CACGTACTTGGCTCCAAATACTCCAGCCACATAGCCAGTGGGGATTaGAGCTATGAACGATCCATAGCTGAGGGAGCTGAGGAGGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: HVLGSKYSSHIASGD*SYERSIAEGAEEDP Trigger: GGGATCCTCCTCAGCTCCCTCAGCTATGGATCGTTCATAGCTCCAATCCCCACTGGCTATGTGGCTGGAGTATTTGGAGCCAAGTACGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS-3UTR CAA 90 bp | GGTTCCAACTCGTCACTGCTGTACTTCGGGGCAAACTCTCCTCCAGTCCCATGGCTTTCTGTGGAAGCATaGAGCTGGCTGGATGCTACT | + |
|
Preference number: 5 (lower is better) Translates to: GSNSSLLYFGANSPPVPWLSVEA*SWLDAT Trigger: AGTAGCATCCAGCCAGCTCAATGCTTCCACAGAAAG...CCATGGGACTGGAGGAGAGTTTGCCCCGAAGTACAGCAGTGACGAGTTGGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS-3UTR CAA 90 bp | CAACTCGTCACTGCTGTACTTCGGGGCAAACTCTCCTCCAGTCCCATGGCAACAAGACCAACCACGTACTaGGCTCCAAATACTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QLVTAVLRGKLSSSPMATRPTTY*APNTPA Trigger: GGCTGGAGTATTTGGAGCCAAGTACGTGGTTGGTCT...TGTTGCCATGGGACTGGAGGAGAGTTTGCCCCGAAGTACAGCAGTGACGAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS-3UTR CAA 90 bp | AACGTTGCTCAGAGATGGGTGAATGTCGGTTCCTTAGCCCAGTCCTGTACCTCTGAATGTCTCCCTCTCTaGCTTTCAGGTCTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NVAQRWVNVGSLAQSCTSECLPL*LSGLLQ Trigger: CTGGAGCAGACCTGAAAGCAAGAGAGGGAGACATTC...AGAGGTACAGGACTGGGCTAAGGAACCGACATTCACCCATCTCTGAGCAACGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS-3UTR CAA 90 bp | AACGTTGCTCAGAGATGGGTGAATGTCGGTTCCTTAGCCCAGTCCTGTACCTCTAGACCAACCACGTACTaGGCTCCAAATACTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: NVAQRWVNVGSLAQSCTSRPTTY*APNTPA Trigger: GGCTGGAGTATTTGGAGCCAAGTACGTGGTTGGTCT...AGAGGTACAGGACTGGGCTAAGGAACCGACATTCACCCATCTCTGAGCAACGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS TCA 90 bp | TTTAATGGGAAGAGACCAGCCCAGGGAGCAATCCTCTTGAGCCAGTaGGCATGTGATGTATCTCCTCTCACCAGTGCTGATAAAGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: FNGKRPAQGAILLSQ*ACDVSPLTSADKGV Trigger: CACCCCTTTATCAGCACTGGTGAGAGGAGATACATCACATGCTCACTGGCTCAAGAGGATTGCTCCCTGGGCTGGTCTCTTCCCATTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS TCA 90 bp | ACCATGGCTTTAATGGGAAGAGACCAGCCCAGGGAGCAATCCTCTTaGGCCAGTGAGCATGTGATGTATCTCCTCTCACCAGTGCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: TMALMGRDQPREQSS*ASEHVMYLLSPVLI Trigger: TATCAGCACTGGTGAGAGGAGATACATCACATGCTCACTGGCTCAAGAGGATTGCTCCCTGGGCTGGTCTCTTCCCATTAAAGCCATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS CCA 90 bp | ACATCCTGGGAGTTAGTGGGAGGTCTTTCTGTGGAAGCATTGAGCTaGCTGGATGCTACTGTGGTATTCACCATGGCGGTTATGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TSWELVGGLSVEALS*LDATVVFTMAVMAK Trigger: CTTTGCCATAACCGCCATGGTGAATACCACAGTAGCATCCAGCCAGCTCAATGCTTCCACAGAAAGACCTCCCACTAACTCCCAGGATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS CCA 90 bp | GAGTCAGGACTGAAGAAATTAACAAGCCCAGACCAACCACGTACTTaGCTCCAAATACTCCAGCCACATAGCCAGTGGGGATTGGAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: ESGLKKLTSPDQPRT*LQILQPHSQWGLEL Trigger: TAGCTCCAATCCCCACTGGCTATGTGGCTGGAGTATTTGGAGCCAAGTACGTGGTTGGTCTGGGCTTGTTAATTTCTTCAGTCCTGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS CCA 90 bp | TGTGATGTATCTCCTCTCACCAGTGCTGATAAAGGGGTGATTCTGTaGGTCATCATATACGAGAGGGAACCAGAGCAGGCAACAGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: CDVSPLTSADKGVIL*VIIYEREPEQATGT Trigger: TGTGCCTGTTGCCTGCTCTGGTTCCCTCTCGTATATGATGACCCACAGAATCACCCCTTTATCAGCACTGGTGAGAGGAGATACATCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS-3UTR CAA 90 bp | AACGTTGCTCAGAGATGGGTGAATGTCGGTTCCTTAGCCCAGTCCTGTACCTCTCTTGAAGGATTGTTCTaGGGTCATGTTGTCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NVAQRWVNVGSLAQSCTSLEGLF*GHVVTG Trigger: CCCAGTGACAACATGACCCAAGAACAATCCTTCAAG...AGAGGTACAGGACTGGGCTAAGGAACCGACATTCACCCATCTCTGAGCAACGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS-3UTR CAA 90 bp | AAGCCAGGATCCACATACAGAAAGCTGTCTGGAATGACTAGATTCTACTACTCCGAATGTCTCCCTCTCTaGCTTTCAGGTCTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KPGSTYRKLSGMTRFYYSECLPL*LSGLLQ Trigger: CTGGAGCAGACCTGAAAGCAAGAGAGGGAGACATTC...GGAGTAGTAGAATCTAGTCATTCCAGACAGCTTTCTGTATGTGGATCCTGGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS TCA 90 bp | AGAAAAATTACAGAGATGCAAGATGAAGGCCAGACCATGCCGCAGTaGGCAGAAGCCTTTCTTGAAGGATTGTTCTTGGGTCATGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: RKITEMQDEGQTMPQ*AEAFLEGLFLGHVV Trigger: GACAACATGACCCAAGAACAATCCTTCAAGAAAGGCTTCTGCTCACTGCGGCATGGTCTGGCCTTCATCTTGCATCTCTGTAATTTTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS-3UTR CAA 90 bp | AAGCCAGGATCCACATACAGAAAGCTGTCTGGAATGACTAGATTCTACTACTCCACTTGCAATAATCCTTaGAGAAAGCCAGCATACCGT | + |
|
Preference number: 5 (lower is better) Translates to: KPGSTYRKLSGMTRFYYSTCNNP*RKPAYR Trigger: ACGGTATGCTGGCTTTCTCAAAGGATTATTGCAAGT...GGAGTAGTAGAATCTAGTCATTCCAGACAGCTTTCTGTATGTGGATCCTGGCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110407.4 |
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| CDS-3UTR CAA 90 bp | TTGTTATATGCAGGACCTAAAGATGATTGGTTAACAAACAAAAGACAGGGATTGCTTGAAGGATTGTTCTaGGGTCATGTTGTCACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLYAGPKDDWLTNKRQGLLEGLF*GHVVTG Trigger: CCCAGTGACAACATGACCCAAGAACAATCCTTCAAG...CAATCCCTGTCTTTTGTTTGTTAACCAATCATCTTTAGGTCCTGCATATAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000225797.2 |
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| CDS TCA 72 bp | CCAAGCATTGACCCTGATGCAGCGATGGTGATGAGTTaGCTCCTTTCCTGTGGGGGAGCCCATTTGGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PSIDPDAAMVMS*LLSCGGAHLAH Trigger: GTGGGCCAAATGGGCTCCCCCACAGGAAAGGAGTCAACTCATCACCATCGCTGCATCAGGGTCAATGCTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 |
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| CDS CCA 72 bp | GGCTCCAAATACTCCAGCCACATAGCCAGTGGGGATTaGAGCTATGAACGATCCATAGCTGAGGGAGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: GSKYSSHIASGD*SYERSIAEGAE Trigger: CTCAGCTCCCTCAGCTATGGATCGTTCATAGCTCCAATCCCCACTGGCTATGTGGCTGGAGTATTTGGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS TCA 72 bp | AAGAGACCAGCCCAGGGAGCAATCCTCTTGAGCCAGTaGGCATGTGATGTATCTCCTCTCACCAGTGCTGAT | + |
|
Preference number: 6 (lower is better) Translates to: KRPAQGAILLSQ*ACDVSPLTSAD Trigger: ATCAGCACTGGTGAGAGGAGATACATCACATGCTCACTGGCTCAAGAGGATTGCTCCCTGGGCTGGTCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS CAA 90 bp | TTCCAGACATCCTGGGAGTTAGTGGGAGGTCTTTCTGTGGAAGCATaGAGCTGGCTGGATGCTACTGTGGTATTCACCATGGCGGTTATG | + |
|
Preference number: 6 (lower is better) Translates to: FQTSWELVGGLSVEA*SWLDATVVFTMAVM Trigger: CATAACCGCCATGGTGAATACCACAGTAGCATCCAGCCAGCTCAATGCTTCCACAGAAAGACCTCCCACTAACTCCCAGGATGTCTGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS TCA 72 bp | AGGCCAGACCATGCCGCAGTGAGCAGAAGCCTTTCTTaGAGGATTGTTCTTGGGTCATGTTGTCACTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RPDHAAVSRSLS*RIVLGSCCHWE Trigger: TTCCCAGTGACAACATGACCCAAGAACAATCCTTCAAGAAAGGCTTCTGCTCACTGCGGCATGGTCTGGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS TCA 72 bp | TTAATGGGAAGAGACCAGCCCAGGGAGCAATCCTCTTaGGCCAGTGAGCATGTGATGTATCTCCTCTCACCA | + |
|
Preference number: 6 (lower is better) Translates to: LMGRDQPREQSS*ASEHVMYLLSP Trigger: TGGTGAGAGGAGATACATCACATGCTCACTGGCTCAAGAGGATTGCTCCCTGGGCTGGTCTCTTCCCATTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS GCA 72 bp | GGGAGGTCTTTCTGTGGAAGCATTGAGCTGGCTGGATaGTACTGTGGTATTCACCATGGCGGTTATGGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: GRSFCGSIELAG*YCGIHHGGYGK Trigger: TTTGCCATAACCGCCATGGTGAATACCACAGTAGCATCCAGCCAGCTCAATGCTTCCACAGAAAGACCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS CCA 72 bp | GAGTTAGTGGGAGGTCTTTCTGTGGAAGCATTGAGCTaGCTGGATGCTACTGTGGTATTCACCATGGCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: ELVGGLSVEALS*LDATVVFTMAV Trigger: AACCGCCATGGTGAATACCACAGTAGCATCCAGCCAGCTCAATGCTTCCACAGAAAGACCTCCCACTAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS CCA 72 bp | TCTCCTCTCACCAGTGCTGATAAAGGGGTGATTCTGTaGGTCATCATATACGAGAGGGAACCAGAGCAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPLTSADKGVIL*VIIYEREPEQA Trigger: TGCCTGCTCTGGTTCCCTCTCGTATATGATGACCCACAGAATCACCCCTTTATCAGCACTGGTGAGAGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS CAA 72 bp | TCCTGGGAGTTAGTGGGAGGTCTTTCTGTGGAAGCATaGAGCTGGCTGGATGCTACTGTGGTATTCACCATG | + |
|
Preference number: 6 (lower is better) Translates to: SWELVGGLSVEA*SWLDATVVFTM Trigger: CATGGTGAATACCACAGTAGCATCCAGCCAGCTCAATGCTTCCACAGAAAGACCTCCCACTAACTCCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS TCA 72 bp | ACAGAGATGCAAGATGAAGGCCAGACCATGCCGCAGTaGGCAGAAGCCTTTCTTGAAGGATTGTTCTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: TEMQDEGQTMPQ*AEAFLEGLFLG Trigger: ACCCAAGAACAATCCTTCAAGAAAGGCTTCTGCTCACTGCGGCATGGTCTGGCCTTCATCTTGCATCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS CCA 72 bp | CTGAAGAAATTAACAAGCCCAGACCAACCACGTACTTaGCTCCAAATACTCCAGCCACATAGCCAGTGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LKKLTSPDQPRT*LQILQPHSQWG Trigger: TCCCCACTGGCTATGTGGCTGGAGTATTTGGAGCCAAGTACGTGGTTGGTCTGGGCTTGTTAATTTCTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS CCA 72 bp | CGCAGTGAGCAGAAGCCTTTCTTGAAGGATTGTTCTTaGGTCATGTTGTCACTGGGAATGTCTCCCTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: RSEQKPFLKDCS*VMLSLGMSPSL Trigger: AAGAGAGGGAGACATTCCCAGTGACAACATGACCCAAGAACAATCCTTCAAGAAAGGCTTCTGCTCACTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS CCA 72 bp | GCCTTAGATTCCTGCAGTGTTTCATTCCAGACATCCTaGGAGTTAGTGGGAGGTCTTTCTGTGGAAGCATTG | + |
|
Preference number: 6 (lower is better) Translates to: ALDSCSVSFQTS*ELVGGLSVEAL Trigger: CAATGCTTCCACAGAAAGACCTCCCACTAACTCCCAGGATGTCTGGAATGAAACACTGCAGGAATCTAAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS CAA 72 bp | CAGAAGCCTTTCTTGAAGGATTGTTCTTGGGTCATGTaGTCACTGGGAATGTCTCCCTCTCTTGCTTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: QKPFLKDCSWVM*SLGMSPSLAFR Trigger: CCTGAAAGCAAGAGAGGGAGACATTCCCAGTGACAACATGACCCAAGAACAATCCTTCAAGAAAGGCTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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| CDS CAA 72 bp | ATTCACCATGGCGGTTATGGCAAAGCTCAAGTTCATTaGTTGGGTATAAATAGAAAAATTACAGAGATGCAA | + |
|
Preference number: 6 (lower is better) Translates to: IHHGGYGKAQVH*LGINRKITEMQ Trigger: TTGCATCTCTGTAATTTTTCTATTTATACCCAACAAATGAACTTGAGCTTTGCCATAACCGCCATGGTGAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021769.16 ENSMUST00000110407.4 ENSMUST00000225797.2 |
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