Pregenerated sensors for SLC17A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036083Ensembl transcript IDs: ENSMUST00000039721.14, ENSMUST00000091698.12, ENSMUST00000110422.3, ENSMUST00000166467.9
Found 167 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCAGAACACACAAGGGGGTTGCCTCTCAGGGCCAGGGACTGCAGTaGCCCTCTGTGCTAAGTTCCTCAGACTACATTTTCATTTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: TRTHKGVASQGQGLQ*PSVLSSSDYIFISP Trigger: TGGAGAAATGAAAATGTAGTCTGAGGAACTTAGCACAGAGGGTCACTGCAGTCCCTGGCCCTGAGAGGCAACCCCCTTGTGTGTTCTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR GCA 90 bp | ACCATGTGTGGAACATGTGTCAGTGCCAAGCCAGGAAACAGAAACTaGAGACTAGGAGTGAAAGCCAGTCAAAGAATGCTCTCTCTTCTT | + |
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Preference number: 1 (lower is better) Translates to: TMCGTCVSAKPGNRN*RLGVKASQRMLSLL Trigger: AAGAAGAGAGAGCATTCTTTGACTGGCTTTCACTCCTAGTCTGCAGTTTCTGTTTCCTGGCTTGGCACTGACACATGTTCCACACATGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR CCA 90 bp | GTGCTAAGTTCCTCAGACTACATTTTCATTTCTCCATCAAAAATCTaGCTGAAGCCAGTAGACAAGGCACGCAACTCATCCGCCAGTAGC | + |
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Preference number: 1 (lower is better) Translates to: VLSSSDYIFISPSKI*LKPVDKARNSSASS Trigger: GCTACTGGCGGATGAGTTGCGTGCCTTGTCTACTGGCTTCAGCCAGATTTTTGATGGAGAAATGAAAATGTAGTCTGAGGAACTTAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR CCA 90 bp | GTGGGACAGCTGAGGATGGAAAGTGACAAGAAAGAAATTAACAATTaGATGTCCTGCTTCTGTGACTGTAACTCTACCAAAATCATTGTC | + |
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Preference number: 1 (lower is better) Translates to: VGQLRMESDKKEINN*MSCFCDCNSTKIIV Trigger: GACAATGATTTTGGTAGAGTTACAGTCACAGAAGCAGGACATCCAATTGTTAATTTCTTTCTTGTCACTTTCCATCCTCAGCTGTCCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
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| 3UTR CCA 90 bp | AAACTACCATGTCAGCACCAAATTCTTGATTCAAAGATGACAACCTaGTCCCTTCTTATCATTTTACTCGATGTTTTATTCCTCTCATAT | + |
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Preference number: 1 (lower is better) Translates to: KLPCQHQILDSKMTT*SLLIILLDVLFLSY Trigger: ATATGAGAGGAATAAAACATCGAGTAAAATGATAAGAAGGGACCAGGTTGTCATCTTTGAATCAAGAATTTGGTGCTGACATGGTAGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR TCA 90 bp | TTTTATGAATATGCAGACAGGGTACTCCCTTTAGAATGCATCCTGTTTCCTGCTGGCCAGGGACTGCAGTaGCCCTCTGTGCTAAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: FYEYADRVLPLECILFPAGQGLQ*PSVLSS Trigger: GGAACTTAGCACAGAGGGTCACTGCAGTCCCTGGCC...AGCAGGAAACAGGATGCATTCTAAAGGGAGTACCCTGTCTGCATATTCATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR TCA 90 bp | GACCAGCATACAGATCATCATTTGACGTGTCATCCTAATTCTGAAATTTTAGGAGCTGTCCTGGGTCTCTaGACTTGGTGTGACCCACAG | + |
|
Preference number: 2 (lower is better) Translates to: DQHTDHHLTCHPNSEILGAVLGL*TWCDPQ Trigger: CTGTGGGTCACACCAAGTTCAGAGACCCAGGACAGC...TCCTAAAATTTCAGAATTAGGATGACACGTCAAATGATGATCTGTATGCTGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR GCA 90 bp | GACCAGCATACAGATCATCATTTGACGTGTCATCCTAATTCTGAAATTTTAGGAAACACACAAGGGGGTTaGCTCTCAGGGCCAGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: DQHTDHHLTCHPNSEILGNTQGG*LSGPGT Trigger: AGTCCCTGGCCCTGAGAGGCAACCCCCTTGTGTGTT...TCCTAAAATTTCAGAATTAGGATGACACGTCAAATGATGATCTGTATGCTGGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR CAA 90 bp | ACAGACAGATCAGAGCTCATACCAAGATCACAGTCATTGCTGTGTTaGTTCATGGTTGGCCTCTCTAATCTTGCCCTAATCTGTACTCAG | + |
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Preference number: 2 (lower is better) Translates to: TDRSELIPRSQSLLC*FMVGLSNLALICTQ Trigger: CTGAGTACAGATTAGGGCAAGATTAGAGAGGCCAACCATGAACAAACACAGCAATGACTGTGATCTTGGTATGAGCTCTGATCTGTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR TCA 90 bp | GGCTTCTGTTTCAGTTTCTGCATTGAGGTTTCTGCCTTAAGTTCCTGTACTGACCTTTTGCAGTTGCGTTaGACTCCGGGATTAAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: GFCFSFCIEVSALSSCTDLLQLR*TPGLKH Trigger: ATGCTTTAATCCCGGAGTTCAACGCAACTGCAAAAG...GTCAGTACAGGAACTTAAGGCAGAAACCTCAATGCAGAAACTGAAACAGAAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR TCA 90 bp | GTTGTCCATTTAATATGTACCCCTGGAATTGCTTCATACATGAGACCTTCTCAGAGCAAGTGGGACAGCTaGGGATGGAAAGTGACAAGA | + |
|
Preference number: 2 (lower is better) Translates to: VVHLICTPGIASYMRPSQSKWDS*GWKVTR Trigger: TCTTGTCACTTTCCATCCTCAGCTGTCCCACTTGCT...CTGAGAAGGTCTCATGTATGAAGCAATTCCAGGGGTACATATTAAATGGACAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000166467.9 |
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| 3UTR-3UTR GCA 90 bp | CATTTTCATTTCTCCATCAAAAATCTGGCTGAAGCCAGTAGACAAGGCACGCAACCAGGAAACAGAAACTaGAGACTAGGAGTGAAAGCC | + |
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Preference number: 2 (lower is better) Translates to: HFHFSIKNLAEASRQGTQPGNRN*RLGVKA Trigger: GGCTTTCACTCCTAGTCTGCAGTTTCTGTTTCCTGG...TTGCGTGCCTTGTCTACTGGCTTCAGCCAGATTTTTGATGGAGAAATGAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR GCA 90 bp | GTGTCCTGCCTTATTCCAGTCCCTAAAACTGCTGTTTTAAAGACCAGCATACAGTGGAACATGTGTCAGTaGCAAGCCAGGAAACAGAAA | + |
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Preference number: 2 (lower is better) Translates to: VSCLIPVPKTAVLKTSIQWNMCQ*QARKQK Trigger: TTTCTGTTTCCTGGCTTGGCACTGACACATGTTCCA...CTGTATGCTGGTCTTTAAAACAGCAGTTTTAGGGACTGGAATAAGGCAGGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCATTGTCCTTTACCACCACTCAGTGATCTCTTTGGTAGGCATGTGGGACCACAGTGAAGAAGAATaGACCATGTGTGGAACATGT | + |
|
Preference number: 2 (lower is better) Translates to: SFIVLYHHSVISLVGMWDHSEEE*TMCGTC Trigger: ACATGTTCCACACATGGTCCATTCTTCTTCACTGTG...GTCCCACATGCCTACCAAAGAGATCACTGAGTGGTGGTAAAGGACAATGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR CCA 90 bp | GATTACTCCCCTCAAGTGGTGACAGCACTGTCAACTTCTCTAGAACTTGAGACATCTCCATCAAAAATCTaGCTGAAGCCAGTAGACAAG | + |
|
Preference number: 2 (lower is better) Translates to: DYSPQVVTALSTSLELETSPSKI*LKPVDK Trigger: CTTGTCTACTGGCTTCAGCCAGATTTTTGATGGAGA...TGTCTCAAGTTCTAGAGAAGTTGACAGTGCTGTCACCACTTGAGGGGAGTAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR CCA 90 bp | TCTTTCATTGTCCTTTACCACCACTCAGTGATCTCTTTGGTAGGCATGTGGGACTGCTGTGTTTGTTCATaGTTGGCCTCTCTAATCTTG | + |
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Preference number: 2 (lower is better) Translates to: SFIVLYHHSVISLVGMWDCCVCS*LASLIL Trigger: CAAGATTAGAGAGGCCAACCATGAACAAACACAGCA...GTCCCACATGCCTACCAAAGAGATCACTGAGTGGTGGTAAAGGACAATGAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR GCA 90 bp | TTTTATGAATATGCAGACAGGGTACTCCCTTTAGAATGCATCCTGTTTCCTGCTAGTGGAAAGATCATTTaGACAGGATCAGGCAAAGGG | + |
|
Preference number: 2 (lower is better) Translates to: FYEYADRVLPLECILFPASGKII*TGSGKG Trigger: CCCTTTGCCTGATCCTGTGCAAATGATCTTTCCACT...AGCAGGAAACAGGATGCATTCTAAAGGGAGTACCCTGTCTGCATATTCATAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR GCA 90 bp | GGCTTCTGTTTCAGTTTCTGCATTGAGGTTTCTGCCTTAAGTTCCTGTACTGACGTACTCCCTTTAGAATaGATCCTGTTTCCTGCTTTT | + |
|
Preference number: 2 (lower is better) Translates to: GFCFSFCIEVSALSSCTDVLPLE*ILFPAF Trigger: AAAAGCAGGAAACAGGATGCATTCTAAAGGGAGTAC...GTCAGTACAGGAACTTAAGGCAGAAACCTCAATGCAGAAACTGAAACAGAAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR CCA 90 bp | CACATTGTGTTGGCCATGGTGTTTTATCACAGCTGTAGAAACCTAATTATGACATTCTCAATGCTGTCCTaGGTCTCTGAACTTGGTGTG | + |
|
Preference number: 2 (lower is better) Translates to: HIVLAMVFYHSCRNLIMTFSMLS*VSELGV Trigger: CACACCAAGTTCAGAGACCCAGGACAGCATTGAGAA...TGTCATAATTAGGTTTCTACAGCTGTGATAAAACACCATGGCCAACACAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR CCA 90 bp | GCCAGGAAACAGAAACTGCAGACTAGGAGTGAAAGCCAGTCAAAGAATGCTCTCAAAGAAATTAACAATTaGATGTCCTGCTTCTGTGAC | + |
|
Preference number: 2 (lower is better) Translates to: ARKQKLQTRSESQSKNALKEINN*MSCFCD Trigger: GTCACAGAAGCAGGACATCCAATTGTTAATTTCTTT...GAGAGCATTCTTTGACTGGCTTTCACTCCTAGTCTGCAGTTTCTGTTTCCTGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166467.9 |
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| 3UTR-3UTR CCA 90 bp | CACATTGTGTTGGCCATGGTGTTTTATCACAGCTGTAGAAACCTAATTATGACAAGTCTTTTGAGCCTATaGCTACTTGACCTTTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: HIVLAMVFYHSCRNLIMTSLLSL*LLDLSS Trigger: GCTGGAAAGGTCAAGTAGCCATAGGCTCAAAAGACT...TGTCATAATTAGGTTTCTACAGCTGTGATAAAACACCATGGCCAACACAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGCAGTTGCGTTGAACTCCGGGATTAAAGCATTGGTAATAAACATCTTCATGAGTCTTTTGAGCCTATaGCTACTTGACCTTTCCAGC | + |
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Preference number: 2 (lower is better) Translates to: FAVALNSGIKALVINIFMSLLSL*LLDLSS Trigger: GCTGGAAAGGTCAAGTAGCCATAGGCTCAAAAGACT...CATGAAGATGTTTATTACCAATGCTTTAATCCCGGAGTTCAACGCAACTGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGCAGTTGCGTTGAACTCCGGGATTAAAGCATTGGTAATAAACATCTTCATGTCTCCATCAAAAATCTaGCTGAAGCCAGTAGACAAG | + |
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Preference number: 2 (lower is better) Translates to: FAVALNSGIKALVINIFMSPSKI*LKPVDK Trigger: CTTGTCTACTGGCTTCAGCCAGATTTTTGATGGAGA...CATGAAGATGTTTATTACCAATGCTTTAATCCCGGAGTTCAACGCAACTGCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR TCA 90 bp | TTTGCAGTTGCGTTGAACTCCGGGATTAAAGCATTGGTAATAAACATCTTCATGTTCTTGATTCAAAGATaGCAACCTGGTCCCTTCTTA | + |
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Preference number: 2 (lower is better) Translates to: FAVALNSGIKALVINIFMFLIQR*QPGPFL Trigger: TAAGAAGGGACCAGGTTGTCATCTTTGAATCAAGAA...CATGAAGATGTTTATTACCAATGCTTTAATCCCGGAGTTCAACGCAACTGCAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR GCA 90 bp | CACATTGTGTTGGCCATGGTGTTTTATCACAGCTGTAGAAACCTAATTATGACACAAGATCACAGTCATTaGTGTGTTTGTTCATGGTTG | + |
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Preference number: 2 (lower is better) Translates to: HIVLAMVFYHSCRNLIMTQDHSH*CVCSWL Trigger: CAACCATGAACAAACACAGCAATGACTGTGATCTTG...TGTCATAATTAGGTTTCTACAGCTGTGATAAAACACCATGGCCAACACAATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR CAA 90 bp | CAGTCATTCTCTTTTGCAGTTGCGTTGAACTCCGGGATTAAAGCATaGGTAATAAACATCTTCATGATAAAAGAGCCAAACTACAGTTTG | + |
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Preference number: 2 (lower is better) Translates to: QSFSFAVALNSGIKA*VINIFMIKEPNYSL Trigger: CAAACTGTAGTTTGGCTCTTTTATCATGAAGATGTTTATTACCAATGCTTTAATCCCGGAGTTCAACGCAACTGCAAAAGAGAATGACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR TCA 72 bp | CACAAGGGGGTTGCCTCTCAGGGCCAGGGACTGCAGTaGCCCTCTGTGCTAAGTTCCTCAGACTACATTTTC | + |
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Preference number: 3 (lower is better) Translates to: HKGVASQGQGLQ*PSVLSSSDYIF Trigger: GAAAATGTAGTCTGAGGAACTTAGCACAGAGGGTCACTGCAGTCCCTGGCCCTGAGAGGCAACCCCCTTGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR GCA 72 bp | ATAGAGGGAAGAAGTTACCAGAACACACAAGGGGGTTaGCTCTCAGGGCCAGGGACTGCAGTGACCCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: IEGRSYQNTQGG*LSGPGTAVTLC Trigger: ACAGAGGGTCACTGCAGTCCCTGGCCCTGAGAGGCAACCCCCTTGTGTGTTCTGGTAACTTCTTCCCTCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR CAA 90 bp | TTTGCAGTTGCGTTGAACTCCGGGATTAAAGCATTGGTAATAAACATCTTCATGGAACACACAAGGGGGTaGCCTCTCAGGGCCAGGGAC | + |
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Preference number: 3 (lower is better) Translates to: FAVALNSGIKALVINIFMEHTRG*PLRARD Trigger: GTCCCTGGCCCTGAGAGGCAACCCCCTTGTGTGTTC...CATGAAGATGTTTATTACCAATGCTTTAATCCCGGAGTTCAACGCAACTGCAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR GCA 72 bp | GGAACATGTGTCAGTGCCAAGCCAGGAAACAGAAACTaGAGACTAGGAGTGAAAGCCAGTCAAAGAATGCTC | + |
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Preference number: 3 (lower is better) Translates to: GTCVSAKPGNRN*RLGVKASQRML Trigger: GAGCATTCTTTGACTGGCTTTCACTCCTAGTCTGCAGTTTCTGTTTCCTGGCTTGGCACTGACACATGTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR CCA 72 bp | GTGGGACAAACGGTGGAGTCTAGTCTTTTGAGCCTATaGCTACTTGACCTTTCCAGCATCACTACGATCTCA | + |
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Preference number: 3 (lower is better) Translates to: VGQTVESSLLSL*LLDLSSITTIS Trigger: TGAGATCGTAGTGATGCTGGAAAGGTCAAGTAGCCATAGGCTCAAAAGACTAGACTCCACCGTTTGTCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR TCA 72 bp | CAGGTAGGTGGCCCCGAGTTATATAAGAAAGCAGCATaGAAAACCCACAGAGAACAAGTCTGTAAGCAGCAC | + |
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Preference number: 3 (lower is better) Translates to: QVGGPELYKKAA*KTHREQVCKQH Trigger: GTGCTGCTTACAGACTTGTTCTCTGTGGGTTTTTCATGCTGCTTTCTTATATAACTCGGGGCCACCTACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR CAA 90 bp | GGCTTCTGTTTCAGTTTCTGCATTGAGGTTTCTGCCTTAAGTTCCTGTACTGACGTGGAGTCTAGTCTTTaGAGCCTATGGCTACTTGAC | + |
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Preference number: 3 (lower is better) Translates to: GFCFSFCIEVSALSSCTDVESSL*SLWLLD Trigger: GTCAAGTAGCCATAGGCTCAAAAGACTAGACTCCAC...GTCAGTACAGGAACTTAAGGCAGAAACCTCAATGCAGAAACTGAAACAGAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR GCA 72 bp | CACACTAGGCAGTTTCAGGACAGTGGAAAGATCATTTaGACAGGATCAGGCAAAGGGCAAGAAAACCATAAC | + |
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Preference number: 3 (lower is better) Translates to: HTRQFQDSGKII*TGSGKGQENHN Trigger: GTTATGGTTTTCTTGCCCTTTGCCTGATCCTGTGCAAATGATCTTTCCACTGTCCTGAAACTGCCTAGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR CAA 90 bp | CCACCTCAGTCAGCTCATTATCTTTTCTTTGATCAGAGACCATCTTTCTGCAGTCAGTGGAAAGATCATTaGCACAGGATCAGGCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: PPQSAHYLFFDQRPSFCSQWKDH*HRIRQR Trigger: CCTTTGCCTGATCCTGTGCAAATGATCTTTCCACTG...ACTGCAGAAAGATGGTCTCTGATCAAAGAAAAGATAATGAGCTGACTGAGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR CAA 90 bp | ATAAGAAAGCAGCATGAAAAACCCACAGAGAACAAGTCTGTAAGCAGCACTCCCTCTGTAGGATATGATTaGAGGGCAGTGATCTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: IRKQHEKPTENKSVSSTPSVGYD*RAVISV Trigger: GACAGAGATCACTGCCCTCAAATCATATCCTACAGA...GGGAGTGCTGCTTACAGACTTGTTCTCTGTGGGTTTTTCATGCTGCTTTCTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR CAA 90 bp | CCACCTCAGTCAGCTCATTATCTTTTCTTTGATCAGAGACCATCTTTCTGCAGTTGTGTTTGTTCATGGTaGGCCTCTCTAATCTTGCCC | + |
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Preference number: 3 (lower is better) Translates to: PPQSAHYLFFDQRPSFCSCVCSW*ASLILP Trigger: GGGCAAGATTAGAGAGGCCAACCATGAACAAACACA...ACTGCAGAAAGATGGTCTCTGATCAAAGAAAAGATAATGAGCTGACTGAGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGCCATGGTGTTTTATCACAGCTGTAGAAACCTAATTATGACAGTCATTCTCCAGACCACTGGCACCTaGAAGACAGACTTAGGGACA | + |
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Preference number: 3 (lower is better) Translates to: LAMVFYHSCRNLIMTVILQTTGT*KTDLGT Trigger: TGTCCCTAAGTCTGTCTTCAAGGTGCCAGTGGTCTG...GAGAATGACTGTCATAATTAGGTTTCTACAGCTGTGATAAAACACCATGGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR GCA 72 bp | CAGACAGATCAGAGCTCATACCAAGATCACAGTCATTaGTGTGTTTGTTCATGGTTGGCCTCTCTAATCTTG | + |
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Preference number: 3 (lower is better) Translates to: QTDQSSYQDHSH*CVCSWLASLIL Trigger: CAAGATTAGAGAGGCCAACCATGAACAAACACAGCAATGACTGTGATCTTGGTATGAGCTCTGATCTGTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR CCA 72 bp | TCCTCAGACTACATTTTCATTTCTCCATCAAAAATCTaGCTGAAGCCAGTAGACAAGGCACGCAACTCATCC | + |
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Preference number: 3 (lower is better) Translates to: SSDYIFISPSKI*LKPVDKARNSS Trigger: GGATGAGTTGCGTGCCTTGTCTACTGGCTTCAGCCAGATTTTTGATGGAGAAATGAAAATGTAGTCTGAGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR CAA 90 bp | GGCTTCTGTTTCAGTTTCTGCATTGAGGTTTCTGCCTTAAGTTCCTGTACTGACCCAAGATCACAGTCATaGCTGTGTTTGTTCATGGTT | + |
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Preference number: 3 (lower is better) Translates to: GFCFSFCIEVSALSSCTDPRSQS*LCLFMV Trigger: AACCATGAACAAACACAGCAATGACTGTGATCTTGG...GTCAGTACAGGAACTTAAGGCAGAAACCTCAATGCAGAAACTGAAACAGAAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR TCA 72 bp | TCTCAGCCCACCTCAGTCAGCTCATTATCTTTTCTTTaGTCAGAGACCATCTTTCTGCAGTCTCTGTTTAGT | + |
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Preference number: 3 (lower is better) Translates to: SQPTSVSSLSFL*SETIFLQSLFS Trigger: ACTAAACAGAGACTGCAGAAAGATGGTCTCTGATCAAAGAAAAGATAATGAGCTGACTGAGGTGGGCTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR CAA 90 bp | GGCTTCTGTTTCAGTTTCTGCATTGAGGTTTCTGCCTTAAGTTCCTGTACTGACGTTAATCTTCTTTCATaGTCCTTTACCACCACTCAG | + |
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Preference number: 3 (lower is better) Translates to: GFCFSFCIEVSALSSCTDVNLLS*SFTTTQ Trigger: CTGAGTGGTGGTAAAGGACAATGAAAGAAGATTAAC...GTCAGTACAGGAACTTAAGGCAGAAACCTCAATGCAGAAACTGAAACAGAAGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGCCATGGTGTTTTATCACAGCTGTAGAAACCTAATTATGACAGTCATTCTCTCTGTAGGATATGATTaGAGGGCAGTGATCTCTGTC | + |
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Preference number: 3 (lower is better) Translates to: LAMVFYHSCRNLIMTVILSVGYD*RAVISV Trigger: GACAGAGATCACTGCCCTCAAATCATATCCTACAGA...GAGAATGACTGTCATAATTAGGTTTCTACAGCTGTGATAAAACACCATGGCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| 3UTR-3UTR CAA 90 bp | GGCTTCTGTTTCAGTTTCTGCATTGAGGTTTCTGCCTTAAGTTCCTGTACTGACTCCGGGATTAAAGCATaGGTAATAAACATCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: GFCFSFCIEVSALSSCTDSGIKA*VINIFM Trigger: CATGAAGATGTTTATTACCAATGCTTTAATCCCGGA...GTCAGTACAGGAACTTAAGGCAGAAACCTCAATGCAGAAACTGAAACAGAAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| 3UTR GCA 72 bp | AATGCTCCATCTAGAAAGATCTGTCCATGTAGCTATTaGTATGAGCCCTACTTCACTGCTTATATAATGTTC | + |
|
Preference number: 3 (lower is better) Translates to: NAPSRKICPCSY*YEPYFTAYIMF Trigger: GAACATTATATAAGCAGTGAAGTAGGGCTCATAGCAATAGCTACATGGACAGATCTTTCTAGATGGAGCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | ATAAGAAAGCAGCATGAAAAACCCACAGAGAACAAGTCTGTAAGCAGCACTCCCTGGTGCAGAGTCGGCTaGGCTCATTCGGAGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IRKQHEKPTENKSVSSTPWCRVG*AHSEEP Trigger: GGGCTCCTCCGAATGAGCGCAGCCGACTCTGCACCA...GGGAGTGCTGCTTACAGACTTGTTCTCTGTGGGTTTTTCATGCTGCTTTCTTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | GCCAGGAAACAGAAACTGCAGACTAGGAGTGAAAGCCAGTCAAAGAATGCTCTCCTGACAAGGCAATGGTaGAGAGTCGGCTGCGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ARKQKLQTRSESQSKNALLTRQW*RVGCAH Trigger: ATGAGCGCAGCCGACTCTGCACCATTGCCTTGTCAG...GAGAGCATTCTTTGACTGGCTTTCACTCCTAGTCTGCAGTTTCTGTTTCCTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | GATTACTCCCCTCAAGTGGTGACAGCACTGTCAACTTCTCTAGAACTTGAGACACTGACAAGGCAATGGTaGAGAGTCGGCTGCGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DYSPQVVTALSTSLELETLTRQW*RVGCAH Trigger: ATGAGCGCAGCCGACTCTGCACCATTGCCTTGTCAG...TGTCTCAAGTTCTAGAGAAGTTGACAGTGCTGTCACCACTTGAGGGGAGTAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGGAAACAGAAACTGCAGACTAGGAGTGAAAGCCAGTCAAAGAATGCTCTCTTGAGGTGGGGTGGGTaGTCGGTGTTGTTGACCATT | + |
|
Preference number: 4 (lower is better) Translates to: ARKQKLQTRSESQSKNALLRWGG*SVLLTI Trigger: AATGGTCAACAACACCGACCACCCACCCCACCTCAA...GAGAGCATTCTTTGACTGGCTTTCACTCCTAGTCTGCAGTTTCTGTTTCCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| 3UTR CAA 72 bp | GGTAGGCATGTGGGACAAACGGTGGAGTCTAGTCTTTaGAGCCTATGGCTACTTGACCTTTCCAGCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: GRHVGQTVESSL*SLWLLDLSSIT Trigger: AGTGATGCTGGAAAGGTCAAGTAGCCATAGGCTCAAAAGACTAGACTCCACCGTTTGTCCCACATGCCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTTTATGGTGCAGAGTCGGCTaGGCTCATTCGGAGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: IFHESLPTEEPAYVMTSLWCRVG*AHSEEP Trigger: GGGCTCCTCCGAATGAGCGCAGCCGACTCTGCACCA...TAAAGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | GACAGCCACACTAGGCAGTTTCAGGACAGTGGAAAGATCATTTGCACAGGATCACTCTTGATGTTCCCATaGGAAAGCTGGCATACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DSHTRQFQDSGKIICTGSLLMFP*ESWHTL Trigger: CAAGGTATGCCAGCTTTCTCATGGGAACATCAAGAG...TGATCCTGTGCAAATGATCTTTCCACTGTCCTGAAACTGCCTAGTGTGGCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | GACATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTGGAGGAGCCCATTTCTaGCAGAGTGCAAACTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: DIIFHESLPTEEPAYVMTGGAHF*QSANCP Trigger: GGGACAGTTTGCACTCTGGCAGAAATGGGCTCCTCC...AGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGATGTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | GGACCATGTGTGGAACATGTGTCAGTGCCAAGCCAGGAAACAGAAACTGCAGACCCATTCTTGAACATCTaGTTTCCCAAACACGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GPCVEHVSVPSQETETADPFLNI*FPKHEV Trigger: TACCTCGTGTTTGGGAAAGCAGATGTTCAAGAATGG...GTCTGCAGTTTCTGTTTCCTGGCTTGGCACTGACACATGTTCCACACATGGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR CCA 90 bp | TCTTTCATTGTCCTTTACCACCACTCAGTGATCTCTTTGGTAGGCATGTGGGACAAAAGCCAGCAACAATaGGTACCAGCACAGCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SFIVLYHHSVISLVGMWDKSQQQ*VPAQPM Trigger: CATCGGCTGTGCTGGTACCCATTGTTGCTGGCTTTT...GTCCCACATGCCTACCAAAGAGATCACTGAGTGGTGGTAAAGGACAATGAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | GACATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTGCTGCTCTTCTGAGCTaGACTGTTGGTTCAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DIIFHESLPTEEPAYVMTAALLS*TVGSER Trigger: CCTCTCTGAACCAACAGTTCAGCTCAGAAGAGCAGC...AGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGATGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | AACAGAAACTGCAGACTAGGAGTGAAAGCCAGTCAAAGAATGCTCTCTCTTCTTGCTGCTCTTCTGAGCTaGACTGTTGGTTCAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NRNCRLGVKASQRMLSLLAALLS*TVGSER Trigger: CCTCTCTGAACCAACAGTTCAGCTCAGAAGAGCAGC...AAGAAGAGAGAGCATTCTTTGACTGGCTTTCACTCCTAGTCTGCAGTTTCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | GACAGCCACACTAGGCAGTTTCAGGACAGTGGAAAGATCATTTGCACAGGATCATCTCTAGCCCATTCTTaGACATCTGCTTTCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DSHTRQFQDSGKIICTGSSLAHS*TSAFPN Trigger: GTTTGGGAAAGCAGATGTTCAAGAATGGGCTAGAGA...TGATCCTGTGCAAATGATCTTTCCACTGTCCTGAAACTGCCTAGTGTGGCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | GACAGCCACACTAGGCAGTTTCAGGACAGTGGAAAGATCATTTGCACAGGATCATATCCTCCAGGACCTTaGATCAGTATCATGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: DSHTRQFQDSGKIICTGSYPPGP*ISIMPY Trigger: GTATGGCATGATACTGATGCAAGGTCCTGGAGGATA...TGATCCTGTGCAAATGATCTTTCCACTGTCCTGAAACTGCCTAGTGTGGCTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | AAGAAATTAACAATTGGATGTCCTGCTTCTGTGACTGTAACTCTACCAAAATCATGGTGCAGAGTCGGCTaGGCTCATTCGGAGGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KKLTIGCPASVTVTLPKSWCRVG*AHSEEP Trigger: GGGCTCCTCCGAATGAGCGCAGCCGACTCTGCACCA...TGATTTTGGTAGAGTTACAGTCACAGAAGCAGGACATCCAATTGTTAATTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | ATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTCTGACAAGGCAATGGTaGAGAGTCGGCTGCGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IIFHESLPTEEPAYVMTSLTRQW*RVGCAH Trigger: ATGAGCGCAGCCGACTCTGCACCATTGCCTTGTCAG...AGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| 3UTR CAA 72 bp | TCTTTCATTGTCCTTTACCACCACTCAGTGATCTCTTaGGTAGGCATGTGGGACAAACGGTGGAGTCTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SFIVLYHHSVIS*VGMWDKRWSLV Trigger: GACTAGACTCCACCGTTTGTCCCACATGCCTACCAAAGAGATCACTGAGTGGTGGTAAAGGACAATGAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | GTTGTCCATTTAATATGTACCCCTGGAATTGCTTCATACATGAGACCTTCTCAGGCTGCTCTTCTGAGCTaGACTGTTGGTTCAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVHLICTPGIASYMRPSQAALLS*TVGSER Trigger: CCTCTCTGAACCAACAGTTCAGCTCAGAAGAGCAGC...CTGAGAAGGTCTCATGTATGAAGCAATTCCAGGGGTACATATTAAATGGACAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | GATTACTCCCCTCAAGTGGTGACAGCACTGTCAACTTCTCTAGAACTTGAGACATCTCTAGCCCATTCTTaGACATCTGCTTTCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DYSPQVVTALSTSLELETSLAHS*TSAFPN Trigger: GTTTGGGAAAGCAGATGTTCAAGAATGGGCTAGAGA...TGTCTCAAGTTCTAGAGAAGTTGACAGTGCTGTCACCACTTGAGGGGAGTAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | TTGGCCATGGTGTTTTATCACAGCTGTAGAAACCTAATTATGACAGTCATTCTCGGAGGAGCCCATTTCTaGCAGAGTGCAAACTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LAMVFYHSCRNLIMTVILGGAHF*QSANCP Trigger: GGGACAGTTTGCACTCTGGCAGAAATGGGCTCCTCC...GAGAATGACTGTCATAATTAGGTTTCTACAGCTGTGATAAAACACCATGGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | CACATTGTGTTGGCCATGGTGTTTTATCACAGCTGTAGAAACCTAATTATGACAGGAGGAGCCCATTTCTaGCAGAGTGCAAACTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HIVLAMVFYHSCRNLIMTGGAHF*QSANCP Trigger: GGGACAGTTTGCACTCTGGCAGAAATGGGCTCCTCC...TGTCATAATTAGGTTTCTACAGCTGTGATAAAACACCATGGCCAACACAATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTTTACTGACAAGGCAATGGTaGAGAGTCGGCTGCGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IFHESLPTEEPAYVMTSLLTRQW*RVGCAH Trigger: ATGAGCGCAGCCGACTCTGCACCATTGCCTTGTCAG...TAAAGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR CCA 90 bp | GGAAAGATCATTTGCACAGGATCAGGCAAAGGGCAAGAAAACCATAACAGGTTCAAACTAGTCCAAGATTaGCAGCCAGTGGGATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GKIICTGSGKGQENHNRFKLVQD*QPVGCR Trigger: TCTGCATCCCACTGGCTGCCAATCTTGGACTAGTTT...GAACCTGTTATGGTTTTCTTGCCCTTTGCCTGATCCTGTGCAAATGATCTTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | ATAAGAAAGCAGCATGAAAAACCCACAGAGAACAAGTCTGTAAGCAGCACTCCCAATTGCAGAAATGTGTaGCGAAGGCGATTCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: IRKQHEKPTENKSVSSTPNCRNV*RRRFHS Trigger: GCTATGGAATCGCCTTCGTCACACATTTCTGCAATT...GGGAGTGCTGCTTACAGACTTGTTCTCTGTGGGTTTTTCATGCTGCTTTCTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | AGTTTCAGGACAGTGGAAAGATCATTTGCACAGGATCAGGCAAAGGGCAAGAAAAATTGCAGAAATGTGTaGCGAAGGCGATTCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: SFRTVERSFAQDQAKGKKNCRNV*RRRFHS Trigger: GCTATGGAATCGCCTTCGTCACACATTTCTGCAATT...TTTCTTGCCCTTTGCCTGATCCTGTGCAAATGATCTTTCCACTGTCCTGAAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | GACATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTCTCTTGATGTTCCCATaGGAAAGCTGGCATACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DIIFHESLPTEEPAYVMTLLMFP*ESWHTL Trigger: CAAGGTATGCCAGCTTTCTCATGGGAACATCAAGAG...AGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | AGTTTCAGGACAGTGGAAAGATCATTTGCACAGGATCAGGCAAAGGGCAAGAAAATGTGCCAATCCTCTTaGTGTTCCCATGAGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFRTVERSFAQDQAKGKKMCQSS*CSHEKA Trigger: AGCTTTCTCATGGGAACATCAAGAGGATTGGCACAT...TTTCTTGCCCTTTGCCTGATCCTGTGCAAATGATCTTTCCACTGTCCTGAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | GGCTTCTGTTTCAGTTTCTGCATTGAGGTTTCTGCCTTAAGTTCCTGTACTGACATGTGCCAATCCTCTTaGTGTTCCCATGAGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GFCFSFCIEVSALSSCTDMCQSS*CSHEKA Trigger: AGCTTTCTCATGGGAACATCAAGAGGATTGGCACAT...GTCAGTACAGGAACTTAAGGCAGAAACCTCAATGCAGAAACTGAAACAGAAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | CATTTTCATTTCTCCATCAAAAATCTGGCTGAAGCCAGTAGACAAGGCACGCAAATTCAGAGTCCTGGCTaGGGAAAAAGCCAGCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: HFHFSIKNLAEASRQGTQIQSPG*GKSQQQ Trigger: TTGTTGCTGGCTTTTTCCTCAGCCAGGACTCTGAAT...TTGCGTGCCTTGTCTACTGGCTTCAGCCAGATTTTTGATGGAGAAATGAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | GACATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTATTCAGAGTCCTGGCTaGGGAAAAAGCCAGCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: DIIFHESLPTEEPAYVMTIQSPG*GKSQQQ Trigger: TTGTTGCTGGCTTTTTCCTCAGCCAGGACTCTGAAT...AGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | CCACCTCAGTCAGCTCATTATCTTTTCTTTGATCAGAGACCATCTTTCTGCAGTATTCAGAGTCCTGGCTaGGGAAAAAGCCAGCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: PPQSAHYLFFDQRPSFCSIQSPG*GKSQQQ Trigger: TTGTTGCTGGCTTTTTCCTCAGCCAGGACTCTGAAT...ACTGCAGAAAGATGGTCTCTGATCAAAGAAAAGATAATGAGCTGACTGAGGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | GGAAAGATCATTTGCACAGGATCAGGCAAAGGGCAAGAAAACCATAACAGGTTCTATCCTCCAGGACCTTaGATCAGTATCATGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: GKIICTGSGKGQENHNRFYPPGP*ISIMPY Trigger: GTATGGCATGATACTGATGCAAGGTCCTGGAGGATA...GAACCTGTTATGGTTTTCTTGCCCTTTGCCTGATCCTGTGCAAATGATCTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR CCA 90 bp | ATAAGAAAGCAGCATGAAAAACCCACAGAGAACAAGTCTGTAAGCAGCACTCCCCGATTCCATAGCGCATaGAACATAAACTCGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: IRKQHEKPTENKSVSSTPRFHSA*NINSGL Trigger: AAGTCCCGAGTTTATGTTCCATGCGCTATGGAATCG...GGGAGTGCTGCTTACAGACTTGTTCTCTGTGGGTTTTTCATGCTGCTTTCTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR CCA 90 bp | ATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTAAAAGCCAGCAACAATaGGTACCAGCACAGCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: IIFHESLPTEEPAYVMTSKSQQQ*VPAQPM Trigger: CATCGGCTGTGCTGGTACCCATTGTTGCTGGCTTTT...AGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| 3UTR CAA 72 bp | TCAGAGCTCATACCAAGATCACAGTCATTGCTGTGTTaGTTCATGGTTGGCCTCTCTAATCTTGCCCTAATC | + |
|
Preference number: 4 (lower is better) Translates to: SELIPRSQSLLC*FMVGLSNLALI Trigger: GATTAGGGCAAGATTAGAGAGGCCAACCATGAACAAACACAGCAATGACTGTGATCTTGGTATGAGCTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | GTGTCCTGCCTTATTCCAGTCCCTAAAACTGCTGTTTTAAAGACCAGCATACAGCATCATAAATCAGAATaGACCAGAGAAGGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSCLIPVPKTAVLKTSIQHHKSE*TREGCR Trigger: TCTGCAGCCTTCTCTGGTTCATTCTGATTTATGATG...CTGTATGCTGGTCTTTAAAACAGCAGTTTTAGGGACTGGAATAAGGCAGGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | TTTTATGAATATGCAGACAGGGTACTCCCTTTAGAATGCATCCTGTTTCCTGCTCTCTTGATGTTCCCATaGGAAAGCTGGCATACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FYEYADRVLPLECILFPALLMFP*ESWHTL Trigger: CAAGGTATGCCAGCTTTCTCATGGGAACATCAAGAG...AGCAGGAAACAGGATGCATTCTAAAGGGAGTACCCTGTCTGCATATTCATAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | GACATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTCTAGCCCATTCTTaGACATCTGCTTTCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DIIFHESLPTEEPAYVMTSLAHS*TSAFPN Trigger: GTTTGGGAAAGCAGATGTTCAAGAATGGGCTAGAGA...AGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGATGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | GACATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTATCCTCCAGGACCTTaGATCAGTATCATGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: DIIFHESLPTEEPAYVMTYPPGP*ISIMPY Trigger: GTATGGCATGATACTGATGCAAGGTCCTGGAGGATA...AGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGATGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039721.14 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | TTGGCCATGGTGTTTTATCACAGCTGTAGAAACCTAATTATGACAGTCATTCTCCCATTTCTGCCAGAGTaGAAACTGTCCCCCATATCC | + |
|
Preference number: 4 (lower is better) Translates to: LAMVFYHSCRNLIMTVILPFLPE*KLSPIS Trigger: GGATATGGGGGACAGTTTGCACTCTGGCAGAAATGG...GAGAATGACTGTCATAATTAGGTTTCTACAGCTGTGATAAAACACCATGGCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | AAGAAAGAAATTAACAATTGGATGTCCTGCTTCTGTGACTGTAACTCTACCAAAGGAGGAGCCCATTTCTaGCAGAGTGCAAACTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KKEINNWMSCFCDCNSTKGGAHF*QSANCP Trigger: GGGACAGTTTGCACTCTGGCAGAAATGGGCTCCTCC...TTTGGTAGAGTTACAGTCACAGAAGCAGGACATCCAATTGTTAATTTCTTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | ATAAGAAAGCAGCATGAAAAACCCACAGAGAACAAGTCTGTAAGCAGCACTCCCCCATTCTTGAACATCTaGTTTCCCAAACACGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IRKQHEKPTENKSVSSTPPFLNI*FPKHEV Trigger: TACCTCGTGTTTGGGAAAGCAGATGTTCAAGAATGG...GGGAGTGCTGCTTACAGACTTGTTCTCTGTGGGTTTTTCATGCTGCTTTCTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR CCA 90 bp | CATTTTCATTTCTCCATCAAAAATCTGGCTGAAGCCAGTAGACAAGGCACGCAACGATTCCATAGCGCATaGAACATAAACTCGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: HFHFSIKNLAEASRQGTQRFHSA*NINSGL Trigger: AAGTCCCGAGTTTATGTTCCATGCGCTATGGAATCG...TTGCGTGCCTTGTCTACTGGCTTCAGCCAGATTTTTGATGGAGAAATGAAAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR CCA 90 bp | ATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTAAACTAGTCCAAGATTaGCAGCCAGTGGGATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IIFHESLPTEEPAYVMTSKLVQD*QPVGCR Trigger: TCTGCATCCCACTGGCTGCCAATCTTGGACTAGTTT...AGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039721.14 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR CCA 90 bp | GACAGCCACACTAGGCAGTTTCAGGACAGTGGAAAGATCATTTGCACAGGATCATCTGAGCTGAACTGTTaGTTCAGAGAGGATAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: DSHTRQFQDSGKIICTGSSELNC*FREDKI Trigger: TATTTTATCCTCTCTGAACCAACAGTTCAGCTCAGA...TGATCCTGTGCAAATGATCTTTCCACTGTCCTGAAACTGCCTAGTGTGGCTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR CCA 90 bp | GCCAGGAAACAGAAACTGCAGACTAGGAGTGAAAGCCAGTCAAAGAATGCTCTCTCTGAGCTGAACTGTTaGTTCAGAGAGGATAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: ARKQKLQTRSESQSKNALSELNC*FREDKI Trigger: TATTTTATCCTCTCTGAACCAACAGTTCAGCTCAGA...GAGAGCATTCTTTGACTGGCTTTCACTCCTAGTCTGCAGTTTCTGTTTCCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | ACTTCTTTACAGCAAGTGGGACAGCTGAGGATGGAAAGTGACAAGAAAGAAATTTATAGGAAGATGCTTTaGGGCTTCATGCTGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: TSLQQVGQLRMESDKKEIYRKML*GFMLIT Trigger: GGTGATCAGCATGAAGCCTCAAAGCATCTTCCTATA...AATTTCTTTCTTGTCACTTTCCATCCTCAGCTGTCCCACTTGCTGTAAAGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | AAGAAAGAAATTAACAATTGGATGTCCTGCTTCTGTGACTGTAACTCTACCAAAGCTGCTCTTCTGAGCTaGACTGTTGGTTCAGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKEINNWMSCFCDCNSTKAALLS*TVGSER Trigger: CCTCTCTGAACCAACAGTTCAGCTCAGAAGAGCAGC...TTTGGTAGAGTTACAGTCACAGAAGCAGGACATCCAATTGTTAATTTCTTTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | GACAAGAAAGAAATTAACAATTGGATGTCCTGCTTCTGTGACTGTAACTCTACCCTCTTGATGTTCCCATaGGAAAGCTGGCATACCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DKKEINNWMSCFCDCNSTLLMFP*ESWHTL Trigger: CAAGGTATGCCAGCTTTCTCATGGGAACATCAAGAG...GGTAGAGTTACAGTCACAGAAGCAGGACATCCAATTGTTAATTTCTTTCTTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | ATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTATGTGCCAATCCTCTTaGTGTTCCCATGAGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: IIFHESLPTEEPAYVMTSMCQSS*CSHEKA Trigger: AGCTTTCTCATGGGAACATCAAGAGGATTGGCACAT...AGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTTTAATTCAGAGTCCTGGCTaGGGAAAAAGCCAGCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: IFHESLPTEEPAYVMTSLIQSPG*GKSQQQ Trigger: TTGTTGCTGGCTTTTTCCTCAGCCAGGACTCTGAAT...TAAAGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | CAGCAAGTGGGACAGCTGAGGATGGAAAGTGACAAGAAAGAAATTAACAATTGGCCATTCTTGAACATCTaGTTTCCCAAACACGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QQVGQLRMESDKKEINNWPFLNI*FPKHEV Trigger: TACCTCGTGTTTGGGAAAGCAGATGTTCAAGAATGG...CCAATTGTTAATTTCTTTCTTGTCACTTTCCATCCTCAGCTGTCCCACTTGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
||
| CDS-3UTR CCA 90 bp | ACTTCTTTACAGCAAGTGGGACAGCTGAGGATGGAAAGTGACAAGAAAGAAATTCGATTCCATAGCGCATaGAACATAAACTCGGGACTT | + |
|
Preference number: 4 (lower is better) Translates to: TSLQQVGQLRMESDKKEIRFHSA*NINSGL Trigger: AAGTCCCGAGTTTATGTTCCATGCGCTATGGAATCG...AATTTCTTTCTTGTCACTTTCCATCCTCAGCTGTCCCACTTGCTGTAAAGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
||
| CDS-3UTR CCA 90 bp | AAGAAAGAAATTAACAATTGGATGTCCTGCTTCTGTGACTGTAACTCTACCAAATTGAGGTGGGGTGGGTaGTCGGTGTTGTTGACCATT | + |
|
Preference number: 4 (lower is better) Translates to: KKEINNWMSCFCDCNSTKLRWGG*SVLLTI Trigger: AATGGTCAACAACACCGACCACCCACCCCACCTCAA...TTTGGTAGAGTTACAGTCACAGAAGCAGGACATCCAATTGTTAATTTCTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
||
| CDS-3UTR CCA 90 bp | CACATTGTGTTGGCCATGGTGTTTTATCACAGCTGTAGAAACCTAATTATGACAAAACTAGTCCAAGATTaGCAGCCAGTGGGATGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HIVLAMVFYHSCRNLIMTKLVQD*QPVGCR Trigger: TCTGCATCCCACTGGCTGCCAATCTTGGACTAGTTT...TGTCATAATTAGGTTTCTACAGCTGTGATAAAACACCATGGCCAACACAATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTTTAAATTGCAGAAATGTGTaGCGAAGGCGATTCCATAGC | + |
|
Preference number: 4 (lower is better) Translates to: IFHESLPTEEPAYVMTSLNCRNV*RRRFHS Trigger: GCTATGGAATCGCCTTCGTCACACATTTCTGCAATT...TAAAGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | CACATTGTGTTGGCCATGGTGTTTTATCACAGCTGTAGAAACCTAATTATGACATATAGGAAGATGCTTTaGGGCTTCATGCTGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: HIVLAMVFYHSCRNLIMTYRKML*GFMLIT Trigger: GGTGATCAGCATGAAGCCTCAAAGCATCTTCCTATA...TGTCATAATTAGGTTTCTACAGCTGTGATAAAACACCATGGCCAACACAATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | ACTTCTTTACAGCAAGTGGGACAGCTGAGGATGGAAAGTGACAAGAAAGAAATTCATCATAAATCAGAATaGACCAGAGAAGGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSLQQVGQLRMESDKKEIHHKSE*TREGCR Trigger: TCTGCAGCCTTCTCTGGTTCATTCTGATTTATGATG...AATTTCTTTCTTGTCACTTTCCATCCTCAGCTGTCCCACTTGCTGTAAAGAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | ATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTCATCATAAATCAGAATaGACCAGAGAAGGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IIFHESLPTEEPAYVMTSHHKSE*TREGCR Trigger: TCTGCAGCCTTCTCTGGTTCATTCTGATTTATGATG...AGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | GTTGTCCATTTAATATGTACCCCTGGAATTGCTTCATACATGAGACCTTCTCAGCATCATAAATCAGAATaGACCAGAGAAGGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVHLICTPGIASYMRPSQHHKSE*TREGCR Trigger: TCTGCAGCCTTCTCTGGTTCATTCTGATTTATGATG...CTGAGAAGGTCTCATGTATGAAGCAATTCCAGGGGTACATATTAAATGGACAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | TTACAGCAAGTGGGACAGCTGAGGATGGAAAGTGACAAGAAAGAAATTAACAATATGTGCCAATCCTCTTaGTGTTCCCATGAGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQQVGQLRMESDKKEINNMCQSS*CSHEKA Trigger: AGCTTTCTCATGGGAACATCAAGAGGATTGGCACAT...ATTGTTAATTTCTTTCTTGTCACTTTCCATCCTCAGCTGTCCCACTTGCTGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | AAAGAAATTAACAATTGGATGTCCTGCTTCTGTGACTGTAACTCTACCAAAATCCCATTTCTGCCAGAGTaGAAACTGTCCCCCATATCC | + |
|
Preference number: 4 (lower is better) Translates to: KEINNWMSCFCDCNSTKIPFLPE*KLSPIS Trigger: GGATATGGGGGACAGTTTGCACTCTGGCAGAAATGG...GATTTTGGTAGAGTTACAGTCACAGAAGCAGGACATCCAATTGTTAATTTCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
||
| CDS-3UTR GCA 90 bp | ATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTCCATTCTTGAACATCTaGTTTCCCAAACACGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: IIFHESLPTEEPAYVMTSPFLNI*FPKHEV Trigger: TACCTCGTGTTTGGGAAAGCAGATGTTCAAGAATGG...AGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR CCA 90 bp | AAGAAAGAAATTAACAATTGGATGTCCTGCTTCTGTGACTGTAACTCTACCAAAAAAAGCCAGCAACAATaGGTACCAGCACAGCCGATG | + |
|
Preference number: 4 (lower is better) Translates to: KKEINNWMSCFCDCNSTKKSQQQ*VPAQPM Trigger: CATCGGCTGTGCTGGTACCCATTGTTGCTGGCTTTT...TTTGGTAGAGTTACAGTCACAGAAGCAGGACATCCAATTGTTAATTTCTTTCTT 41% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
||
| CDS-3UTR CCA 90 bp | GACATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTGAGCTGAACTGTTaGTTCAGAGAGGATAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: DIIFHESLPTEEPAYVMTSELNC*FREDKI Trigger: TATTTTATCCTCTCTGAACCAACAGTTCAGCTCAGA...AGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGATGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR TCA 90 bp | AAGAAAGAAATTAACAATTGGATGTCCTGCTTCTGTGACTGTAACTCTACCAAATCTCTAGCCCATTCTTaGACATCTGCTTTCCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KKEINNWMSCFCDCNSTKSLAHS*TSAFPN Trigger: GTTTGGGAAAGCAGATGTTCAAGAATGGGCTAGAGA...TTTGGTAGAGTTACAGTCACAGAAGCAGGACATCCAATTGTTAATTTCTTTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTTTATCTGAGCTGAACTGTTaGTTCAGAGAGGATAAAATA | + |
|
Preference number: 4 (lower is better) Translates to: IFHESLPTEEPAYVMTSLSELNC*FREDKI Trigger: TATTTTATCCTCTCTGAACCAACAGTTCAGCTCAGA...TAAAGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS TCA 90 bp | GATGCCGCCCACAAGGAGGACAGTAAAGATTCCCAATGTCATTCCTaGCAAGGCAATGGTGCAGAGTCGGCTGCGCTCATTCGGAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: DAAHKEDSKDSQCHS*QGNGAESAALIRRS Trigger: GCTCCTCCGAATGAGCGCAGCCGACTCTGCACCATTGCCTTGTCAGGAATGACATTGGGAATCTTTACTGTCCTCCTTGTGGGCGGCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS CCA 90 bp | TCACCGCTTAAACCCGCAGGAAGCTGTTCAGTAGAGCTATTGAGGTaGGGTGGGTGGTCGGTGTTGTTGACCATTGCTACCATGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: SPLKPAGSCSVELLR*GGWSVLLTIATMVM Trigger: CATCACCATGGTAGCAATGGTCAACAACACCGACCACCCACCCCACCTCAATAGCTCTACTGAACAGCTTCCTGCGGGTTTAAGCGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS CCA 90 bp | AAACCCGCAGGAAGCTGTTCAGTAGAGCTATTGAGGTGGGGTGGGTaGTCGGTGTTGTTGACCATTGCTACCATGGTGATGCTTATAATA | + |
|
Preference number: 5 (lower is better) Translates to: KPAGSCSVELLRWGG*SVLLTIATMVMLII Trigger: TATTATAAGCATCACCATGGTAGCAATGGTCAACAACACCGACCACCCACCCCACCTCAATAGCTCTACTGAACAGCTTCCTGCGGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR CAA 90 bp | GGACCATGTGTGGAACATGTGTCAGTGCCAAGCCAGGAAACAGAAACTGCAGACGCCATCAGTGTGAAATaGCAGAAATGTGTGACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GPCVEHVSVPSQETETADAISVK*QKCVTK Trigger: CTTCGTCACACATTTCTGCAATTTCACACTGATGGC...GTCTGCAGTTTCTGTTTCCTGGCTTGGCACTGACACATGTTCCACACATGGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR CAA 90 bp | AGTTTCAGGACAGTGGAAAGATCATTTGCACAGGATCAGGCAAAGGGCAAGAAAGGGTGGTCGGTGTTGTaGACCATTGCTACCATGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SFRTVERSFAQDQAKGKKGWSVL*TIATMV Trigger: CACCATGGTAGCAATGGTCAACAACACCGACCACCC...TTTCTTGCCCTTTGCCTGATCCTGTGCAAATGATCTTTCCACTGTCCTGAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR CAA 90 bp | GACAGCCACACTAGGCAGTTTCAGGACAGTGGAAAGATCATTTGCACAGGATCAGTATCCTCCAGGACCTaGCATCAGTATCATGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: DSHTRQFQDSGKIICTGSVSSRT*HQYHAI Trigger: TATGGCATGATACTGATGCAAGGTCCTGGAGGATAC...TGATCCTGTGCAAATGATCTTTCCACTGTCCTGAAACTGCCTAGTGTGGCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS GCA 90 bp | TCCAAGCAGAGCAATTCCAACCACTTTCTTTGTTCCTATTTTCCCTaGCAAGTATCCTCCAGGACCTTGCATCAGTATCATGCCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: SKQSNSNHFLCSYFP*QVSSRTLHQYHAIL Trigger: CAGTATGGCATGATACTGATGCAAGGTCCTGGAGGATACTTGGCAGGGAAAATAGGAACAAAGAAAGTGGTTGGAATTGCTCTGCTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039721.14 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR CAA 90 bp | CTGCAGTCTCTGTTTAGTAGTCTATCTTGTCTAGCAGGTTCCAGCCCTAGGATTGCTGAAGATGATTCCTaGAGTTTGAGGACTCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LQSLFSSLSCLAGSSPRIAEDDS*SLRTPV Trigger: AACTGGAGTCCTCAAACTCAAGGAATCATCTTCAGC...AATCCTAGGGCTGGAACCTGCTAGACAAGATAGACTACTAAACAGAGACTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR CAA 90 bp | TCTTTCATTGTCCTTTACCACCACTCAGTGATCTCTTTGGTAGGCATGTGGGACGCTGAAGATGATTCCTaGAGTTTGAGGACTCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SFIVLYHHSVISLVGMWDAEDDS*SLRTPV Trigger: AACTGGAGTCCTCAAACTCAAGGAATCATCTTCAGC...GTCCCACATGCCTACCAAAGAGATCACTGAGTGGTGGTAAAGGACAATGAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR CAA 90 bp | TTCATTTCTCCATCAAAAATCTGGCTGAAGCCAGTAGACAAGGCACGCAACTCAGTATCCTCCAGGACCTaGCATCAGTATCATGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: FISPSKIWLKPVDKARNSVSSRT*HQYHAI Trigger: TATGGCATGATACTGATGCAAGGTCCTGGAGGATAC...TGAGTTGCGTGCCTTGTCTACTGGCTTCAGCCAGATTTTTGATGGAGAAATGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS GCA 90 bp | GACCAGAGAGGCAGAGATTTGAGCATAGCTTTGATGGGAAGTGGCTaGTCTTCTGAGCTGAACTGTTGGTTCAGAGAGGATAAAATATAT | + |
|
Preference number: 5 (lower is better) Translates to: DQRGRDLSIALMGSG*SSELNCWFREDKIY Trigger: ATATATTTTATCCTCTCTGAACCAACAGTTCAGCTCAGAAGAGCAGCCACTTCCCATCAAAGCTATGCTCAAATCTCTGCCTCTCTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR CAA 90 bp | AACAGAAACTGCAGACTAGGAGTGAAAGCCAGTCAAAGAATGCTCTCTCTTCTTCAGAGAGGCAGAGATTaGAGCATAGCTTTGATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: NRNCRLGVKASQRMLSLLQRGRD*SIALMG Trigger: TCCCATCAAAGCTATGCTCAAATCTCTGCCTCTCTG...AAGAAGAGAGAGCATTCTTTGACTGGCTTTCACTCCTAGTCTGCAGTTTCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR CAA 90 bp | CATTTTCATTTCTCCATCAAAAATCTGGCTGAAGCCAGTAGACAAGGCACGCAATGTAATATAGCTGGATaGGATATAGGGCAGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: HFHFSIKNLAEASRQGTQCNIAG*DIGQSR Trigger: GCGGCTCTGCCCTATATCCAATCCAGCTATATTACA...TTGCGTGCCTTGTCTACTGGCTTCAGCCAGATTTTTGATGGAGAAATGAAAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR CAA 90 bp | GACATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTGTAATATAGCTGGATaGGATATAGGGCAGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: DIIFHESLPTEEPAYVMTCNIAG*DIGQSR Trigger: GCGGCTCTGCCCTATATCCAATCCAGCTATATTACA...AGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS-3UTR CAA 90 bp | GACATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTGCTGAAGATGATTCCTaGAGTTTGAGGACTCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: DIIFHESLPTEEPAYVMTAEDDS*SLRTPV Trigger: AACTGGAGTCCTCAAACTCAAGGAATCATCTTCAGC...AGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGATGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039721.14 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | ATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTCAGAGAGGCAGAGATTaGAGCATAGCTTTGATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: IIFHESLPTEEPAYVMTSQRGRD*SIALMG Trigger: TCCCATCAAAGCTATGCTCAAATCTCTGCCTCTCTG...AGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | CCACCTCAGTCAGCTCATTATCTTTTCTTTGATCAGAGACCATCTTTCTGCAGTCTCTCTAGCCCATTCTaGAACATCTGCTTTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PPQSAHYLFFDQRPSFCSLSSPF*NICFPK Trigger: TTTGGGAAAGCAGATGTTCAAGAATGGGCTAGAGAG...ACTGCAGAAAGATGGTCTCTGATCAAAGAAAAGATAATGAGCTGACTGAGGTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | GACATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTCTCTCTAGCCCATTCTaGAACATCTGCTTTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: DIIFHESLPTEEPAYVMTLSSPF*NICFPK Trigger: TTTGGGAAAGCAGATGTTCAAGAATGGGCTAGAGAG...AGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGATGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | ATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTGCCATCAGTGTGAAATaGCAGAAATGTGTGACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IIFHESLPTEEPAYVMTSAISVK*QKCVTK Trigger: CTTCGTCACACATTTCTGCAATTTCACACTGATGGC...AGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | ATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTTTAGTATCCTCCAGGACCTaGCATCAGTATCATGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: IFHESLPTEEPAYVMTSLVSSRT*HQYHAI Trigger: TATGGCATGATACTGATGCAAGGTCCTGGAGGATAC...TAAAGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039721.14 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | TTGGCCATGGTGTTTTATCACAGCTGTAGAAACCTAATTATGACAGTCATTCTCCAGAGAGGCAGAGATTaGAGCATAGCTTTGATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LAMVFYHSCRNLIMTVILQRGRD*SIALMG Trigger: TCCCATCAAAGCTATGCTCAAATCTCTGCCTCTCTG...GAGAATGACTGTCATAATTAGGTTTCTACAGCTGTGATAAAACACCATGGCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | TTACAGCAAGTGGGACAGCTGAGGATGGAAAGTGACAAGAAAGAAATTAACAATCAGAGAGGCAGAGATTaGAGCATAGCTTTGATGGGA | + |
|
Preference number: 5 (lower is better) Translates to: LQQVGQLRMESDKKEINNQRGRD*SIALMG Trigger: TCCCATCAAAGCTATGCTCAAATCTCTGCCTCTCTG...ATTGTTAATTTCTTTCTTGTCACTTTCCATCCTCAGCTGTCCCACTTGCTGTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | CAGTTAAATGGTAGGGTCTTCAAATTCTTCCACACAAGCATTTCCCACCCCTCTATGAGCCTAAAATTCTaGCTCAGTAGAAAATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QLNGRVFKFFHTSISHPSMSLKF*LSRKSA Trigger: GGCAGATTTTCTACTGAGCAAGAATTTTAGGCTCAT...AGAGGGGTGGGAAATGCTTGTGTGGAAGAATTTGAAGACCCTACCATTTAACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | AGTTTCAGGACAGTGGAAAGATCATTTGCACAGGATCAGGCAAAGGGCAAGAAAATGAGCCTAAAATTCTaGCTCAGTAGAAAATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFRTVERSFAQDQAKGKKMSLKF*LSRKSA Trigger: GGCAGATTTTCTACTGAGCAAGAATTTTAGGCTCAT...TTTCTTGCCCTTTGCCTGATCCTGTGCAAATGATCTTTCCACTGTCCTGAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | ACTTCTTTACAGCAAGTGGGACAGCTGAGGATGGAAAGTGACAAGAAAGAAATTCTCTCTAGCCCATTCTaGAACATCTGCTTTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: TSLQQVGQLRMESDKKEILSSPF*NICFPK Trigger: TTTGGGAAAGCAGATGTTCAAGAATGGGCTAGAGAG...AATTTCTTTCTTGTCACTTTCCATCCTCAGCTGTCCCACTTGCTGTAAAGAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | ATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTTTAGCCATCAGTGTGAAATaGCAGAAATGTGTGACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: IFHESLPTEEPAYVMTSLAISVK*QKCVTK Trigger: CTTCGTCACACATTTCTGCAATTTCACACTGATGGC...TAAAGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | TTTTATGAATATGCAGACAGGGTACTCCCTTTAGAATGCATCCTGTTTCCTGCTTTCCAACCACTTTCTTaGTTCCTATTTTCCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FYEYADRVLPLECILFPAFQPLS*FLFSLP Trigger: TGGCAGGGAAAATAGGAACAAAGAAAGTGGTTGGAA...AGCAGGAAACAGGATGCATTCTAAAGGGAGTACCCTGTCTGCATATTCATAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
||
| CDS-3UTR CAA 90 bp | ATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTTTCCAACCACTTTCTTaGTTCCTATTTTCCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IIFHESLPTEEPAYVMTSFQPLS*FLFSLP Trigger: TGGCAGGGAAAATAGGAACAAAGAAAGTGGTTGGAA...AGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039721.14 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | CAGCAAGTGGGACAGCTGAGGATGGAAAGTGACAAGAAAGAAATTAACAATTGGATGAGCCTAAAATTCTaGCTCAGTAGAAAATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: QQVGQLRMESDKKEINNWMSLKF*LSRKSA Trigger: GGCAGATTTTCTACTGAGCAAGAATTTTAGGCTCAT...CCAATTGTTAATTTCTTTCTTGTCACTTTCCATCCTCAGCTGTCCCACTTGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | ATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTTTAGATGATTCCTTGAGTTaGAGGACTCCAGTTATACAC | + |
|
Preference number: 5 (lower is better) Translates to: IFHESLPTEEPAYVMTSLDDSLS*RTPVIH Trigger: GTGTATAACTGGAGTCCTCAAACTCAAGGAATCATC...TAAAGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039721.14 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | GACAAGAAAGAAATTAACAATTGGATGTCCTGCTTCTGTGACTGTAACTCTACCGATGATTCCTTGAGTTaGAGGACTCCAGTTATACAC | + |
|
Preference number: 5 (lower is better) Translates to: DKKEINNWMSCFCDCNSTDDSLS*RTPVIH Trigger: GTGTATAACTGGAGTCCTCAAACTCAAGGAATCATC...GGTAGAGTTACAGTCACAGAAGCAGGACATCCAATTGTTAATTTCTTTCTTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | ATCATTTTTCATGAAAGTCTTCCCACAGAGGAGCCAGCGTATGTAATGACTTCTATGAGCCTAAAATTCTaGCTCAGTAGAAAATCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IIFHESLPTEEPAYVMTSMSLKF*LSRKSA Trigger: GGCAGATTTTCTACTGAGCAAGAATTTTAGGCTCAT...AGAAGTCATTACATACGCTGGCTCCTCTGTGGGAAGACTTTCATGAAAAATGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | AAGAAAGAAATTAACAATTGGATGTCCTGCTTCTGTGACTGTAACTCTACCAAATGTAATATAGCTGGATaGGATATAGGGCAGAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KKEINNWMSCFCDCNSTKCNIAG*DIGQSR Trigger: GCGGCTCTGCCCTATATCCAATCCAGCTATATTACA...TTTGGTAGAGTTACAGTCACAGAAGCAGGACATCCAATTGTTAATTTCTTTCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | AAAGAAATTAACAATTGGATGTCCTGCTTCTGTGACTGTAACTCTACCAAAATCGCCATCAGTGTGAAATaGCAGAAATGTGTGACGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KEINNWMSCFCDCNSTKIAISVK*QKCVTK Trigger: CTTCGTCACACATTTCTGCAATTTCACACTGATGGC...GATTTTGGTAGAGTTACAGTCACAGAAGCAGGACATCCAATTGTTAATTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | GACCAGCATACAGATCATCATTTGACGTGTCATCCTAATTCTGAAATTTTAGGAGATGATTCCTTGAGTTaGAGGACTCCAGTTATACAC | + |
|
Preference number: 5 (lower is better) Translates to: DQHTDHHLTCHPNSEILGDDSLS*RTPVIH Trigger: GTGTATAACTGGAGTCCTCAAACTCAAGGAATCATC...TCCTAAAATTTCAGAATTAGGATGACACGTCAAATGATGATCTGTATGCTGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039721.14 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | AAGAAAGAAATTAACAATTGGATGTCCTGCTTCTGTGACTGTAACTCTACCAAACTCTCTAGCCCATTCTaGAACATCTGCTTTCCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: KKEINNWMSCFCDCNSTKLSSPF*NICFPK Trigger: TTTGGGAAAGCAGATGTTCAAGAATGGGCTAGAGAG...TTTGGTAGAGTTACAGTCACAGAAGCAGGACATCCAATTGTTAATTTCTTTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091698.12 ENSMUST00000166467.9 |
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| CDS-3UTR CAA 90 bp | AAGAAATTAACAATTGGATGTCCTGCTTCTGTGACTGTAACTCTACCAAAATCATTCCAACCACTTTCTTaGTTCCTATTTTCCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KKLTIGCPASVTVTLPKSFQPLS*FLFSLP Trigger: TGGCAGGGAAAATAGGAACAAAGAAAGTGGTTGGAA...TGATTTTGGTAGAGTTACAGTCACAGAAGCAGGACATCCAATTGTTAATTTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000166467.9 |
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| CDS GCA 72 bp | CAGAGTCGGCTGCGCTCATTCGGAGGAGCCCATTTCTaGCAGAGTGCAAACTGTCCCCCATATCCAGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QSRLRSFGGAHF*QSANCPPYPVP Trigger: GGGCACTGGATATGGGGGACAGTTTGCACTCTGGCAGAAATGGGCTCCTCCGAATGAGCGCAGCCGACTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS GCA 72 bp | ATGTCATTCCTGACAAGGCAATGGTGCAGAGTCGGCTaGGCTCATTCGGAGGAGCCCATTTCTGCCAGAGTG | + |
|
Preference number: 6 (lower is better) Translates to: MSFLTRQWCRVG*AHSEEPISARV Trigger: CACTCTGGCAGAAATGGGCTCCTCCGAATGAGCGCAGCCGACTCTGCACCATTGCCTTGTCAGGAATGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS CAA 72 bp | CCGCTTAAACCCGCAGGAAGCTGTTCAGTAGAGCTATaGAGGTGGGGTGGGTGGTCGGTGTTGTTGACCATT | + |
|
Preference number: 6 (lower is better) Translates to: PLKPAGSCSVEL*RWGGWSVLLTI Trigger: AATGGTCAACAACACCGACCACCCACCCCACCTCAATAGCTCTACTGAACAGCTTCCTGCGGGTTTAAGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS TCA 72 bp | GGGGCCTTTATAGGAAGATGCTTTGAGGCTTCATGCTaGTCACCGCTTAAACCCGCAGGAAGCTGTTCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: GAFIGRCFEASC*SPLKPAGSCSV Trigger: TACTGAACAGCTTCCTGCGGGTTTAAGCGGTGATCAGCATGAAGCCTCAAAGCATCTTCCTATAAAGGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039721.14 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS CAA 90 bp | AGCTGTTCAGTAGAGCTATTGAGGTGGGGTGGGTGGTCGGTGTTGTaGACCATTGCTACCATGGTGATGCTTATAATAGAATTCTGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SCSVELLRWGGWSVL*TIATMVMLIIEFCA Trigger: GGCGCAGAATTCTATTATAAGCATCACCATGGTAGCAATGGTCAACAACACCGACCACCCACCCCACCTCAATAGCTCTACTGAACAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS TCA 72 bp | CTAGTCCAAGATTGGCAGCCAGTGGGATGCAGAGAGTaGGTAATGAAGATCCAAGCAGAGCAATTCCAACCA | + |
|
Preference number: 6 (lower is better) Translates to: LVQDWQPVGCRE*VMKIQAEQFQP Trigger: TGGTTGGAATTGCTCTGCTTGGATCTTCATTACTCACTCTCTGCATCCCACTGGCTGCCAATCTTGGACTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039721.14 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS TCA 72 bp | CAGCCGATGAATGTGCCAATCCTCTTGATGTTCCCATaGGAAAGCTGGCATACCTTGGAGCAATGTCTAACG | + |
|
Preference number: 6 (lower is better) Translates to: QPMNVPILLMFP*ESWHTLEQCLT Trigger: CGTTAGACATTGCTCCAAGGTATGCCAGCTTTCTCATGGGAACATCAAGAGGATTGGCACATTCATCGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS TCA 72 bp | AAAAGAAATTCCTCCACCCGAATTCAGAGTCCTGGCTaGGGAAAAAGCCAGCAACAATGGGTACCAGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: KRNSSTRIQSPG*GKSQQQWVPAQ Trigger: CTGTGCTGGTACCCATTGTTGCTGGCTTTTTCCTCAGCCAGGACTCTGAATTCGGGTGGAGGAATTTCTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS TCA 72 bp | GTGCCCTTTATAGGAAGATGCTTTGAGGCTTCATGCTaGTCACCGCTTAAACCCGCAGGAAGCTGTTCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: VPFIGRCFEASC*SPLKPAGSCSV Trigger: TACTGAACAGCTTCCTGCGGGTTTAAGCGGTGATCAGCATGAAGCCTCAAAGCATCTTCCTATAAAGGGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091698.12 |
||
| CDS GCA 72 bp | GTTCCTATTTTCCCTGCCAAGTATCCTCCAGGACCTTaGATCAGTATCATGCCATACTGGACAGAGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VPIFPAKYPPGP*ISIMPYWTELK Trigger: CTTCAGCTCTGTCCAGTATGGCATGATACTGATGCAAGGTCCTGGAGGATACTTGGCAGGGAAAATAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039721.14 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS GCA 72 bp | GGCAGAGATTTGAGCATAGCTTTGATGGGAAGTGGCTaGTCTTCTGAGCTGAACTGTTGGTTCAGAGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GRDLSIALMGSG*SSELNCWFRED Trigger: ATCCTCTCTGAACCAACAGTTCAGCTCAGAAGAGCAGCCACTTCCCATCAAAGCTATGCTCAAATCTCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS CAA 90 bp | GGAAGCTGTTCAGTAGAGCTATTGAGGTGGGGTGGGTGGTCGGTGTaGTTGACCATTGCTACCATGGTGATGCTTATAATAGAATTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSCSVELLRWGGWSV*LTIATMVMLIIEFC Trigger: GCAGAATTCTATTATAAGCATCACCATGGTAGCAATGGTCAACAACACCGACCACCCACCCCACCTCAATAGCTCTACTGAACAGCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS CAA 72 bp | TCAGTAGAGCTATTGAGGTGGGGTGGGTGGTCGGTGTaGTTGACCATTGCTACCATGGTGATGCTTATAATA | + |
|
Preference number: 6 (lower is better) Translates to: SVELLRWGGWSV*LTIATMVMLII Trigger: TATTATAAGCATCACCATGGTAGCAATGGTCAACAACACCGACCACCCACCCCACCTCAATAGCTCTACTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
||
| CDS CAA 72 bp | TGTTCCTATTTTCCCTGCCAAGTATCCTCCAGGACCTaGCATCAGTATCATGCCATACTGGACAGAGCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: CSYFPCQVSSRT*HQYHAILDRAE Trigger: TTCAGCTCTGTCCAGTATGGCATGATACTGATGCAAGGTCCTGGAGGATACTTGGCAGGGAAAATAGGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039721.14 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS CAA 90 bp | CAGTATCATGCCATACTGGACAGAGCTGAAGATGATTCCTTGAGTTaGAGGACTCCAGTTATACACAGGGGCCTTTATAGGAAGATGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QYHAILDRAEDDSLS*RTPVIHRGLYRKML Trigger: AAGCATCTTCCTATAAAGGCCCCTGTGTATAACTGGAGTCCTCAAACTCAAGGAATCATCTTCAGCTCTGTCCAGTATGGCATGATACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039721.14 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS CAA 90 bp | TTGCATCAGTATCATGCCATACTGGACAGAGCTGAAGATGATTCCTaGAGTTTGAGGACTCCAGTTATACACAGGGGCCTTTATAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LHQYHAILDRAEDDS*SLRTPVIHRGLYRK Trigger: CTTCCTATAAAGGCCCCTGTGTATAACTGGAGTCCTCAAACTCAAGGAATCATCTTCAGCTCTGTCCAGTATGGCATGATACTGATGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039721.14 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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| CDS TCA 72 bp | GTTGGAGTGTACATTATAAAGGTGTTAACAAGCCACTaGTGGGTCATAGTGCAGAGACACATGGACCAGAGA | + |
|
Preference number: 6 (lower is better) Translates to: VGVYIIKVLTSH*WVIVQRHMDQR Trigger: TCTCTGGTCCATGTGTCTCTGCACTATGACCCATCAGTGGCTTGTTAACACCTTTATAATGTACACTCCAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039721.14 ENSMUST00000091698.12 ENSMUST00000110422.3 ENSMUST00000166467.9 |
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