Pregenerated sensors for SLC17A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036110Ensembl transcript IDs: ENSMUST00000006786.11, ENSMUST00000099697.3
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCAGCACTTTGGTTGGTCTCCAACCCTACATCCTCAGAGGCGGGTaGGAGTCCTTTCTTTGGCCCAGCTCTGGATTTCTGCTTGTCCAA | + |
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Preference number: 1 (lower is better) Translates to: VSTLVGLQPYILRGG*ESFLWPSSGFLLVQ Trigger: TTGGACAAGCAGAAATCCAGAGCTGGGCCAAAGAAAGGACTCTCACCCGCCTCTGAGGATGTAGGGTTGGAGACCAACCAAAGTGCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR GCA 90 bp | TCAGTGCTAGTGCCCACTCTGGCTAAGACAAGTGCATACTGGGTATaGTTTCACAAAGGTTATGAGTTCACATGGACATCAGCTCTGTTG | + |
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Preference number: 1 (lower is better) Translates to: SVLVPTLAKTSAYWV*FHKGYEFTWTSALL Trigger: CAACAGAGCTGATGTCCATGTGAACTCATAACCTTTGTGAAAGCATACCCAGTATGCACTTGTCTTAGCCAGAGTGGGCACTAGCACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR CCA 90 bp | TTCTTCTCAGTGCTAGTGCCCACTCTGGCTAAGACAAGTGCATACTaGGTATGCTTTCACAAAGGTTATGAGTTCACATGGACATCAGCT | + |
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Preference number: 1 (lower is better) Translates to: FFSVLVPTLAKTSAY*VCFHKGYEFTWTSA Trigger: AGCTGATGTCCATGTGAACTCATAACCTTTGTGAAAGCATACCCAGTATGCACTTGTCTTAGCCAGAGTGGGCACTAGCACTGAGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR TCA 90 bp | TCTGTATTCTCACCTACTACGGGAAGAAGCTTCTCTGATGATGGCTaGGCAAGACACTGTAAGTACAGCAGAAGGCCATTAAGAGTCATT | + |
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Preference number: 1 (lower is better) Translates to: SVFSPTTGRSFSDDG*ARHCKYSRRPLRVI Trigger: AATGACTCTTAATGGCCTTCTGCTGTACTTACAGTGTCTTGCTCAGCCATCATCAGAGAAGCTTCTTCCCGTAGTAGGTGAGAATACAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR CCA 90 bp | ATTTGTATAACCAGTACAACTCCATTAAAGCAAACAAAGTTCAATTaGAGTCACCTTCTGGGTAGGGATGGGGGTTTGTGTCCATGTTCT | + |
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Preference number: 1 (lower is better) Translates to: ICITSTTPLKQTKFN*SHLLGRDGGLCPCS Trigger: AGAACATGGACACAAACCCCCATCCCTACCCAGAAGGTGACTCCAATTGAACTTTGTTTGCTTTAATGGAGTTGTACTGGTTATACAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR TCA 90 bp | CTTTCTTCCCTCTCTCAATTTAACTCCCAGACTACAATCATTCTTTaGGAGCTCTCTCTCCCTTCATATATAACATACCAATTCATTATA | + |
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Preference number: 1 (lower is better) Translates to: LSSLSQFNSQTTIIL*ELSLPSYITYQFII Trigger: TATAATGAATTGGTATGTTATATATGAAGGGAGAGAGAGCTCTCAAAGAATGATTGTAGTCTGGGAGTTAAATTGAGAGAGGGAAGAAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR CAA 90 bp | CTAACCATCAGTTTGTGGAGAGCCACCAATGACCTTGGCAATAGCTaGGGTTATTTGTGGGTTTCCATGGGGGCATCTCCAGCCAACAAC | + |
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Preference number: 2 (lower is better) Translates to: LTISLWRATNDLGNS*GYLWVSMGASPANN Trigger: GTTGTTGGCTGGAGATGCCCCCATGGAAACCCACAAATAACCCAAGCTATTGCCAAGGTCATTGGTGGCTCTCCACAAACTGATGGTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR CAA 90 bp | ATTCCATTTAGACTGAGGGCTCCAAGGTCTCTCGCTTTCAGCCCATaGTCCAGTTGTGGGTGTCTGTCTGTATTCTCACCTACTACGGGA | + |
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Preference number: 2 (lower is better) Translates to: IPFRLRAPRSLAFSP*SSCGCLSVFSPTTG Trigger: TCCCGTAGTAGGTGAGAATACAGACAGACACCCACAACTGGACAATGGGCTGAAAGCGAGAGACCTTGGAGCCCTCAGTCTAAATGGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR-3UTR CCA 90 bp | GGTGTCTGTCTGTATTCTCACCTACTACGGGAAGAAGCTTCTCTGATGATGGCTAGCTTGGGTTATTTGTaGGTTTCCATGGGGGCATCT | + |
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Preference number: 2 (lower is better) Translates to: GVCLYSHLLREEASLMMASLGYL*VSMGAS Trigger: AGATGCCCCCATGGAAACCCACAAATAACCCAAGCT...AGCCATCATCAGAGAAGCTTCTTCCCGTAGTAGGTGAGAATACAGACAGACACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR-3UTR CCA 90 bp | GGTGTCTGTCTGTATTCTCACCTACTACGGGAAGAAGCTTCTCTGATGATGGCTTCTTTGGCCCAGCTCTaGATTTCTGCTTGTCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: GVCLYSHLLREEASLMMASLAQL*ISACPN Trigger: ATTTGGACAAGCAGAAATCCAGAGCTGGGCCAAAGA...AGCCATCATCAGAGAAGCTTCTTCCCGTAGTAGGTGAGAATACAGACAGACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR-3UTR TCA 90 bp | GTTTTGAGATGTTCACTTTGCCCTTTCTGGTATCTATTCAATCTCTCTTTCTGTATCCTCAGAGGCGGGTaGGAGTCCTTTCTTTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: VLRCSLCPFWYLFNLSFCILRGG*ESFLWP Trigger: GGGCCAAAGAAAGGACTCTCACCCGCCTCTGAGGAT...ACAGAAAGAGAGATTGAATAGATACCAGAAAGGGCAAAGTGAACATCTCAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR-3UTR GCA 90 bp | CAAAGTTCCCTGAACCCTGAGGGGAAGAATTTGATGGAGACATTCCATTTAGACCCATCTATATGGAGGTaGCTTAGAGTTTATTGTACA | + |
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Preference number: 2 (lower is better) Translates to: QSSLNPEGKNLMETFHLDPSIWR*LRVYCT Trigger: TGTACAATAAACTCTAAGGCACCTCCATATAGATGG...GTCTAAATGGAATGTCTCCATCAAATTCTTCCCCTCAGGGTTCAGGGAACTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR-3UTR TCA 90 bp | GTTTTATTTGGTGGTAGAAGATGCCTAGTTAGAGCTTTGTCTCCCATTTCATGGCTGCTTGTCCAAATATaGGATAAAAGATCAGACCAA | + |
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Preference number: 2 (lower is better) Translates to: VLFGGRRCLVRALSPISWLLVQI*DKRSDQ Trigger: TTGGTCTGATCTTTTATCTCATATTTGGACAAGCAG...CCATGAAATGGGAGACAAAGCTCTAACTAGGCATCTTCTACCACCAAATAAAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR-3UTR GCA 90 bp | TTCTATATGACCCTTCTAATGGACCTTAGTTTTAGCTGTCTCTCCCCATATTTCCCAGCTCTGGATTTCTaGTTGTCCAAATATGAGATA | + |
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Preference number: 2 (lower is better) Translates to: FYMTLLMDLSFSCLSPYFPALDF*LSKYEI Trigger: TATCTCATATTTGGACAAGCAGAAATCCAGAGCTGG...GAAATATGGGGAGAGACAGCTAAAACTAAGGTCCATTAGAAGGGTCATATAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR-3UTR GCA 90 bp | CTAATGGACCTTAGTTTTAGCTGTCTCTCCCCATATTTCCTCTTATCCACTTCTTTGAGATGTTCACTTTaGCCTTTCTGGTATCTATTC | + |
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Preference number: 2 (lower is better) Translates to: LMDLSFSCLSPYFLLSTSLRCSL*PFWYLF Trigger: GAATAGATACCAGAAAGGGCAAAGTGAACATCTCAA...AGAAGTGGATAAGAGGAAATATGGGGAGAGACAGCTAAAACTAAGGTCCATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR-3UTR TCA 90 bp | TTCTATATGACCCTTCTAATGGACCTTAGTTTTAGCTGTCTCTCCCCATATTTCACTATGATAGTGTTTTaGGATGTTCACTTTGCCCTT | + |
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Preference number: 2 (lower is better) Translates to: FYMTLLMDLSFSCLSPYFTMIVF*DVHFAL Trigger: AAGGGCAAAGTGAACATCTCAAAACACTATCATAGT...GAAATATGGGGAGAGACAGCTAAAACTAAGGTCCATTAGAAGGGTCATATAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR TCA 72 bp | TTGGTTGGTCTCCAACCCTACATCCTCAGAGGCGGGTaGGAGTCCTTTCTTTGGCCCAGCTCTGGATTTCTG | + |
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Preference number: 3 (lower is better) Translates to: LVGLQPYILRGG*ESFLWPSSGFL Trigger: CAGAAATCCAGAGCTGGGCCAAAGAAAGGACTCTCACCCGCCTCTGAGGATGTAGGGTTGGAGACCAACCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR-3UTR CAA 90 bp | CATGAAAAACTTCCCAGGAGTCTAAAACTTAGTGGCACCTGGGTTCCACCACAGGGGTCAGCACTTTGGTaGGTCTCCAACCCTACATCC | + |
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Preference number: 3 (lower is better) Translates to: HEKLPRSLKLSGTWVPPQGSALW*VSNPTS Trigger: GGATGTAGGGTTGGAGACCAACCAAAGTGCTGACCC...CTGTGGTGGAACCCAGGTGCCACTAAGTTTTAGACTCCTGGGAAGTTTTTCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
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| 3UTR CCA 72 bp | GCCACCAATGACCTTGGCAATAGCTTGGGTTATTTGTaGGTTTCCATGGGGGCATCTCCAGCCAACAACTCA | + |
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Preference number: 3 (lower is better) Translates to: ATNDLGNSLGYL*VSMGASPANNS Trigger: TGAGTTGTTGGCTGGAGATGCCCCCATGGAAACCCACAAATAACCCAAGCTATTGCCAAGGTCATTGGTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR CCA 72 bp | GTTTGTGGAGAGCCACCAATGACCTTGGCAATAGCTTaGGTTATTTGTGGGTTTCCATGGGGGCATCTCCAG | + |
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Preference number: 3 (lower is better) Translates to: VCGEPPMTLAIA*VICGFPWGHLQ Trigger: CTGGAGATGCCCCCATGGAAACCCACAAATAACCCAAGCTATTGCCAAGGTCATTGGTGGCTCTCCACAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR CCA 72 bp | CTGGAGGGTAGCCTGGGATCTGCTTTTGAAGATCTTTaGAAAATGCTAGCACCCAGCCAGAATAGAGAAGCG | + |
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Preference number: 3 (lower is better) Translates to: LEGSLGSAFEDL*KMLAPSQNREA Trigger: CGCTTCTCTATTCTGGCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGCAGATCCCAGGCTACCCTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
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| 3UTR TCA 72 bp | GAGGGGAAGAATTTGATGGAGACATTCCATTTAGACTaGGGGCTCCAAGGTCTCTCGCTTTCAGCCCATTGT | + |
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Preference number: 3 (lower is better) Translates to: EGKNLMETFHLD*GLQGLSLSAHC Trigger: ACAATGGGCTGAAAGCGAGAGACCTTGGAGCCCTCAGTCTAAATGGAATGTCTCCATCAAATTCTTCCCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR-3UTR CAA 90 bp | GTTTTATTTGGTGGTAGAAGATGCCTAGTTAGAGCTTTGTCTCCCATTTCATGGGGGTCAGCACTTTGGTaGGTCTCCAACCCTACATCC | + |
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Preference number: 3 (lower is better) Translates to: VLFGGRRCLVRALSPISWGSALW*VSNPTS Trigger: GGATGTAGGGTTGGAGACCAACCAAAGTGCTGACCC...CCATGAAATGGGAGACAAAGCTCTAACTAGGCATCTTCTACCACCAAATAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR GCA 72 bp | GTGCCCACTCTGGCTAAGACAAGTGCATACTGGGTATaGTTTCACAAAGGTTATGAGTTCACATGGACATCA | + |
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Preference number: 3 (lower is better) Translates to: VPTLAKTSAYWV*FHKGYEFTWTS Trigger: TGATGTCCATGTGAACTCATAACCTTTGTGAAAGCATACCCAGTATGCACTTGTCTTAGCCAGAGTGGGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR CCA 72 bp | ACCTTGGCAATAGCTTGGGTTATTTGTGGGTTTCCATaGGGGCATCTCCAGCCAACAACTCAATTAGATGTA | + |
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Preference number: 3 (lower is better) Translates to: TLAIAWVICGFP*GHLQPTTQLDV Trigger: TACATCTAATTGAGTTGTTGGCTGGAGATGCCCCCATGGAAACCCACAAATAACCCAAGCTATTGCCAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR CCA 72 bp | ACCAGTACAACTCCATTAAAGCAAACAAAGTTCAATTaGAGTCACCTTCTGGGTAGGGATGGGGGTTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: TSTTPLKQTKFN*SHLLGRDGGLC Trigger: ACACAAACCCCCATCCCTACCCAGAAGGTGACTCCAATTGAACTTTGTTTGCTTTAATGGAGTTGTACTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR CCA 72 bp | TACTGGGTATGCTTTCACAAAGGTTATGAGTTCACATaGACATCAGCTCTGTTGTATCTAAAAGGCCTTGTC | + |
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Preference number: 3 (lower is better) Translates to: YWVCFHKGYEFT*TSALLYLKGLV Trigger: GACAAGGCCTTTTAGATACAACAGAGCTGATGTCCATGTGAACTCATAACCTTTGTGAAAGCATACCCAGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR-3UTR CAA 90 bp | TTCTATATGACCCTTCTAATGGACCTTAGTTTTAGCTGTCTCTCCCCATATTTCATCAGACCAAACATGTaGACAGCAGCAGACAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: FYMTLLMDLSFSCLSPYFIRPNM*TAADRK Trigger: TTTCCTGTCTGCTGCTGTCAACATGTTTGGTCTGAT...GAAATATGGGGAGAGACAGCTAAAACTAAGGTCCATTAGAAGGGTCATATAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR-3UTR CAA 90 bp | TCTCAGCATCACTCTCAGTACCTGACACCAACTATTATCCTTACAACTTCTGGTCAAAGGCAACTAAAATaGACTTCAAATTCCTCTACC | + |
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Preference number: 3 (lower is better) Translates to: SQHHSQYLTPTIILTTSGQRQLK*TSNSST Trigger: GGTAGAGGAATTTGAAGTCAATTTTAGTTGCCTTTG...ACCAGAAGTTGTAAGGATAATAGTTGGTGTCAGGTACTGAGAGTGATGCTGAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR TCA 72 bp | GACAAGTGCATACTGGGTATGCTTTCACAAAGGTTATaGGTTCACATGGACATCAGCTCTGTTGTATCTAAA | + |
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Preference number: 3 (lower is better) Translates to: DKCILGMLSQRL*VHMDISSVVSK Trigger: TTTAGATACAACAGAGCTGATGTCCATGTGAACTCATAACCTTTGTGAAAGCATACCCAGTATGCACTTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR-3UTR CAA 90 bp | AATTCTTATAGGACCTTTCCTGTGTTCCTAACAGTCTCAAAGAAGGTTTATCAAGCCTGGGATCTGCTTTaGAAGATCTTTGGAAAATGC | + |
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Preference number: 3 (lower is better) Translates to: NSYRTFPVFLTVSKKVYQAWDLL*KIFGKC Trigger: GCATTTTCCAAAGATCTTCAAAAGCAGATCCCAGGC...TTGATAAACCTTCTTTGAGACTGTTAGGAACACAGGAAAGGTCCTATAAGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR TCA 72 bp | CTCTCTCAATTTAACTCCCAGACTACAATCATTCTTTaGGAGCTCTCTCTCCCTTCATATATAACATACCAA | + |
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Preference number: 3 (lower is better) Translates to: LSQFNSQTTIIL*ELSLPSYITYQ Trigger: TTGGTATGTTATATATGAAGGGAGAGAGAGCTCTCAAAGAATGATTGTAGTCTGGGAGTTAAATTGAGAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR GCA 72 bp | TCACATAGTCTCTACCTTAAGGATGAATGTCTCTTATaGAATTTTTCTCCAAGCATCTCTCCAGCTCATTTA | + |
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Preference number: 3 (lower is better) Translates to: SHSLYLKDECLL*NFSPSISPAHL Trigger: TAAATGAGCTGGAGAGATGCTTGGAGAAAAATTGCATAAGAGACATTCATCCTTAAGGTAGAGACTATGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR TCA 72 bp | ATCTATGACCTATCTAGTCTCAGGTTATTGACCAACTaGGAATTCTTAGGCATGTTTGTTGTTGTTGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: IYDLSSLRLLTN*EFLGMFVVVVV Trigger: AACAACAACAACAACAAACATGCCTAAGAATTCTCAGTTGGTCAATAACCTGAGACTAGATAGGTCATAGAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR GCA 72 bp | CCTCTTTCCAGTCTTCTAGTTTCATACAGACTCCTTTaGTCTATGTATTATAAATATTTGGAAAGCAGATCC | + |
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Preference number: 3 (lower is better) Translates to: PLSSLLVSYRLL*SMYYKYLESRS Trigger: GGATCTGCTTTCCAAATATTTATAATACATAGAGCAAAGGAGTCTGTATGAAACTAGAAGACTGGAAAGAGG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| CDS-3UTR TCA 90 bp | ACCTGGGTTCCACCACAGACTAACTCACTCTGGAGGGTAGCCTGGGATCTGCTTACTTTGCCCAAATTGTaGACTGACCAGTCCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: TWVPPQTNSLWRVAWDLLTLPKL*TDQSRP Trigger: TGGCCTGGACTGGTCAGTTCACAATTTGGGCAAAGT...AAGCAGATCCCAGGCTACCCTCCAGAGTGAGTTAGTCTGTGGTGGAACCCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
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| CDS-3UTR GCA 90 bp | ACCTGGGTTCCACCACAGACTAACTCACTCTGGAGGGTAGCCTGGGATCTGCTTCTCAGGCTCACACGCTaGGTTATCATGGTGAAGTTG | + |
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Preference number: 4 (lower is better) Translates to: TWVPPQTNSLWRVAWDLLLRLTR*VIMVKL Trigger: CAACTTCACCATGATAACGCAGCGTGTGAGCCTGAG...AAGCAGATCCCAGGCTACCCTCCAGAGTGAGTTAGTCTGTGGTGGAACCCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
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| CDS-3UTR TCA 90 bp | ACCTGGGTTCCACCACAGACTAACTCACTCTGGAGGGTAGCCTGGGATCTGCTTTGCTGGTCCCAGGAATaGGTATCAGCAAAACAATGG | + |
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Preference number: 4 (lower is better) Translates to: TWVPPQTNSLWRVAWDLLCWSQE*VSAKQW Trigger: CCATTGTTTTGCTGATACTCATTCCTGGGACCAGCA...AAGCAGATCCCAGGCTACCCTCCAGAGTGAGTTAGTCTGTGGTGGAACCCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
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| CDS-3UTR CCA 90 bp | GAGGGTAGCCTGGGATCTGCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCGAAAATGGCCCACAGTaGCAGGCATCTGACCATCGC | + |
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Preference number: 4 (lower is better) Translates to: EGSLGSAFEDLWKMLAPSENGPQ*QASDHR Trigger: GCGATGGTCAGATGCCTGCCACTGTGGGCCATTTTC...GCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGCAGATCCCAGGCTACCCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
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| CDS-3UTR TCA 90 bp | GCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCCAGAATAGAGAAGCGCTGCTCTGCTCTGGTTGCTaGGGAGATCCATCACAGGCC | + |
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Preference number: 4 (lower is better) Translates to: AFEDLWKMLAPSQNREALLCSGC*GDPSQA Trigger: GGCCTGTGATGGATCTCCTCAGCAACCAGAGCAGAG...CAGCGCTTCTCTATTCTGGCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
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| CDS-3UTR TCA 90 bp | TCTCAGCATCACTCTCAGTACCTGACACCAACTATTATCCTTACAACTTCTGGTCAGCGTGAGCAGGGATaGGATGAGCAACCCAGCGCC | + |
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Preference number: 4 (lower is better) Translates to: SQHHSQYLTPTIILTTSGQREQG*DEQPSA Trigger: GGCGCTGGGTTGCTCATCTCATCCCTGCTCACGCTG...ACCAGAAGTTGTAAGGATAATAGTTGGTGTCAGGTACTGAGAGTGATGCTGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| CDS-3UTR TCA 90 bp | GAGGGTAGCCTGGGATCTGCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCCGACTGCTGAGCCACTaGGGATGTGATGTGTTCCTT | + |
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Preference number: 4 (lower is better) Translates to: EGSLGSAFEDLWKMLAPSRLLSH*GCDVFL Trigger: AAGGAACACATCACATCCTCAGTGGCTCAGCAGTCG...GCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGCAGATCCCAGGCTACCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
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| CDS-3UTR TCA 90 bp | CATGAAAAACTTCCCAGGAGTCTAAAACTTAGTGGCACCTGGGTTCCACCACAGACAGTGGCAGGCATCTaGCCATCGCCTTTATGGGGA | + |
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Preference number: 4 (lower is better) Translates to: HEKLPRSLKLSGTWVPPQTVAGI*PSPLWG Trigger: TCCCCATAAAGGCGATGGTCAGATGCCTGCCACTGT...CTGTGGTGGAACCCAGGTGCCACTAAGTTTTAGACTCCTGGGAAGTTTTTCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
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| CDS-3UTR CCA 90 bp | TCTGCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCCAGAATAGAGAAGCGCACAGCGCAAAGGGATaGAAGGAGGAGCCCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SAFEDLWKMLAPSQNREAHSAKG*KEEPQG Trigger: TCCCTGGGGCTCCTCCTTCCATCCCTTTGCGCTGTG...CGCTTCTCTATTCTGGCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
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| 3UTR CAA 72 bp | ACCCTACATCCTCAGAGGCGGGTGAGAGTCCTTTCTTaGGCCCAGCTCTGGATTTCTGCTTGTCCAAATATG | + |
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Preference number: 4 (lower is better) Translates to: TLHPQRRVRVLS*AQLWISACPNM Trigger: CATATTTGGACAAGCAGAAATCCAGAGCTGGGCCAAAGAAAGGACTCTCACCCGCCTCTGAGGATGTAGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| 3UTR CAA 72 bp | AGAGCCACCAATGACCTTGGCAATAGCTTGGGTTATTaGTGGGTTTCCATGGGGGCATCTCCAGCCAACAAC | + |
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Preference number: 4 (lower is better) Translates to: RATNDLGNSLGY*WVSMGASPANN Trigger: GTTGTTGGCTGGAGATGCCCCCATGGAAACCCACAAATAACCCAAGCTATTGCCAAGGTCATTGGTGGCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
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| CDS-3UTR TCA 90 bp | GAGGGTAGCCTGGGATCTGCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCGAGGAGCCCCAGGGATaGAAAGAGTTTTCGAACTGT | + |
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Preference number: 4 (lower is better) Translates to: EGSLGSAFEDLWKMLAPSEEPQG*KEFSNC Trigger: ACAGTTCGAAAACTCTTTTCATCCCTGGGGCTCCTC...GCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGCAGATCCCAGGCTACCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
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| CDS-3UTR CCA 90 bp | GAGGGTAGCCTGGGATCTGCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCCCTCACACTTATGCATaGGTGATGCATGGGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: EGSLGSAFEDLWKMLAPSPHTYA*VMHGVI Trigger: GATGACCCCATGCATCACCCATGCATAAGTGTGAGG...GCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGCAGATCCCAGGCTACCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| 3UTR CAA 72 bp | AGTTTGTGGAGAGCCACCAATGACCTTGGCAATAGCTaGGGTTATTTGTGGGTTTCCATGGGGGCATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLWRATNDLGNS*GYLWVSMGASP Trigger: TGGAGATGCCCCCATGGAAACCCACAAATAACCCAAGCTATTGCCAAGGTCATTGGTGGCTCTCCACAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR TCA 90 bp | GACTTCAAATTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCAGGCAGCGTGAGCAGGGATaGGATGAGCAACCCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: DFKFLYHYQTQLHEKLPRQREQG*DEQPSA Trigger: GGCGCTGGGTTGCTCATCTCATCCCTGCTCACGCTG...CCTGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAATTTGAAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR TCA 90 bp | CATGAAAAACTTCCCAGGAGTCTAAAACTTAGTGGCACCTGGGTTCCACCACAGCCCTTGAGATGCCCATaGGGAAACTTGCATATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HEKLPRSLKLSGTWVPPQPLRCP*GNLHIW Trigger: CCAGATATGCAAGTTTCCTCATGGGCATCTCAAGGG...CTGTGGTGGAACCCAGGTGCCACTAAGTTTTAGACTCCTGGGAAGTTTTTCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR TCA 90 bp | GAGGGTAGCCTGGGATCTGCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCATAACATGCCCAACCTaGCTGATAAGGAATCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EGSLGSAFEDLWKMLAPSITCPT*LIRNPV Trigger: CACCGGATTCCTTATCAGTCAGGTTGGGCATGTTAT...GCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGCAGATCCCAGGCTACCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR GCA 90 bp | GCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCCAGAATAGAGAAGCGCTGGTGAAGTTGGAGAAGTaGATGATGAGAGCCAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: AFEDLWKMLAPSQNREALVKLEK*MMRASA Trigger: CGCGCTGGCTCTCATCATGCACTTCTCCAACTTCAC...CAGCGCTTCTCTATTCTGGCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR GCA 90 bp | TTCTATATGACCCTTCTAATGGACCTTAGTTTTAGCTGTCTCTCCCCATATTTCCCAGGCCATTCCCTGTaGCATCCCCTGGACTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FYMTLLMDLSFSCLSPYFPGHSL*HPLDCA Trigger: CGCACAGTCCAGGGGATGGCACAGGGAATGGCCTGG...GAAATATGGGGAGAGACAGCTAAAACTAAGGTCCATTAGAAGGGTCATATAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR CCA 90 bp | GGTGTCTGTCTGTATTCTCACCTACTACGGGAAGAAGCTTCTCTGATGATGGCTCCTCACACTTATGCATaGGTGATGCATGGGGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GVCLYSHLLREEASLMMAPHTYA*VMHGVI Trigger: GATGACCCCATGCATCACCCATGCATAAGTGTGAGG...AGCCATCATCAGAGAAGCTTCTTCCCGTAGTAGGTGAGAATACAGACAGACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR CCA 90 bp | TATCAAACACAGTTGCATGAAAAACTTCCCAGGAGTCTAAAACTTAGTGGCACCCACAGCGCAAAGGGATaGAAGGAGGAGCCCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YQTQLHEKLPRSLKLSGTHSAKG*KEEPQG Trigger: TCCCTGGGGCTCCTCCTTCCATCCCTTTGCGCTGTG...GGTGCCACTAAGTTTTAGACTCCTGGGAAGTTTTTCATGCAACTGTGTTTGATA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CCA 90 bp | GGTGTCTGTCTGTATTCTCACCTACTACGGGAAGAAGCTTCTCTGATGATGGCTGGAAACTTGCATATCTaGGGGCAACGTCTAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GVCLYSHLLREEASLMMAGNLHI*GQRLGC Trigger: ACACCCTAGACGTTGCCCCCAGATATGCAAGTTTCC...AGCCATCATCAGAGAAGCTTCTTCCCGTAGTAGGTGAGAATACAGACAGACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR CCA 90 bp | CATGAAAAACTTCCCAGGAGTCTAAAACTTAGTGGCACCTGGGTTCCACCACAGGGAAACTTGCATATCTaGGGGCAACGTCTAGGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HEKLPRSLKLSGTWVPPQGNLHI*GQRLGC Trigger: ACACCCTAGACGTTGCCCCCAGATATGCAAGTTTCC...CTGTGGTGGAACCCAGGTGCCACTAAGTTTTAGACTCCTGGGAAGTTTTTCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| 3UTR CAA 72 bp | AATGGTGATAAGCAAAGTATGTTAAGGGTCAGCACTTaGGTTGGTCTCCAACCCTACATCCTCAGAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: NGDKQSMLRVST*VGLQPYILRGG Trigger: CCCGCCTCTGAGGATGTAGGGTTGGAGACCAACCAAAGTGCTGACCCTTAACATACTTTGCTTATCACCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR TCA 90 bp | AGAAAGAATGGTGATAAGCAAAGTATGTTAAGGGTCAGCACTTTGGTTGGTCTCCTCTGCTCTGGTTGCTaGGGAGATCCATCACAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKNGDKQSMLRVSTLVGLLCSGC*GDPSQA Trigger: GGCCTGTGATGGATCTCCTCAGCAACCAGAGCAGAG...GAGACCAACCAAAGTGCTGACCCTTAACATACTTTGCTTATCACCATTCTTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR TCA 90 bp | GCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCCAGAATAGAGAAGCGCTGGAGGAGCCCCAGGGATaGAAAGAGTTTTCGAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: AFEDLWKMLAPSQNREALEEPQG*KEFSNC Trigger: ACAGTTCGAAAACTCTTTTCATCCCTGGGGCTCCTC...CAGCGCTTCTCTATTCTGGCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR GCA 90 bp | TCTGCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCCAGAATAGAGAAGCGGTGAAGTTGGAGAAGTaGATGATGAGAGCCAGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: SAFEDLWKMLAPSQNREAVKLEK*MMRASA Trigger: CGCGCTGGCTCTCATCATGCACTTCTCCAACTTCAC...CGCTTCTCTATTCTGGCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR GCA 90 bp | TTCAAATTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCAGGAGTCCAGGCCATTCCCTGTaGCATCCCCTGGACTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: FKFLYHYQTQLHEKLPRSPGHSL*HPLDCA Trigger: CGCACAGTCCAGGGGATGGCACAGGGAATGGCCTGG...ACTCCTGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAATTTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR GCA 90 bp | TCTGCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCCAGAATAGAGAAGCGGCCCATGAGGAAACTTaGATATCTGGGGGCAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: SAFEDLWKMLAPSQNREAAHEET*ISGGNV Trigger: GACGTTGCCCCCAGATATGCAAGTTTCCTCATGGGC...CGCTTCTCTATTCTGGCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGCAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CCA 90 bp | GCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCCAGAATAGAGAAGCGCTGAAAGTCAGCAGCCAGTaGAGTAAACAGCGTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: AFEDLWKMLAPSQNREALKVSSQ*SKQREQ Trigger: CTGCTCACGCTGTTTACTCCACTGGCTGCTGACTTT...CAGCGCTTCTCTATTCTGGCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CCA 90 bp | GAGGGTAGCCTGGGATCTGCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCTCTTTGGCCCAGCTCTaGATTTCTGCTTGTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: EGSLGSAFEDLWKMLAPSSLAQL*ISACPN Trigger: ATTTGGACAAGCAGAAATCCAGAGCTGGGCCAAAGA...GCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGCAGATCCCAGGCTACCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099697.3 |
||
| CDS-3UTR TCA 90 bp | ACTCCCACGACTTTGTTTTGCCACTATTTACCAGCATATCGTTCAAGCAGATCGGAGCCACTGAGGATGTaGTGTGTTCCTTTTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TPTTLFCHYLPAYRSSRSEPLRM*CVPFPS Trigger: TGAGGGAAAAGGAACACATCACATCCTCAGTGGCTC...CGATCTGCTTGAACGATATGCTGGTAAATAGTGGCAAAACAAAGTCGTGGGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR TCA 90 bp | GAGGGTAGCCTGGGATCTGCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCTCGGTAGGTATGTTATaGTTATGGTGCAAAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EGSLGSAFEDLWKMLAPSSVGML*LWCKAR Trigger: TCTGGCTTTGCACCATAATCATAACATACCTACCGA...GCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGCAGATCCCAGGCTACCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR TCA 90 bp | TCTGCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCCAGAATAGAGAAGCGCCCTTGAGATGCCCATaGGGAAACTTGCATATCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAFEDLWKMLAPSQNREAPLRCP*GNLHIW Trigger: CCAGATATGCAAGTTTCCTCATGGGCATCTCAAGGG...CGCTTCTCTATTCTGGCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CCA 90 bp | GAGGGTCACATAGTCTCTACCTTAAGGATGAATGTCTCTTATGCAATTTTTCTCCTTGCTCCGTTCAAGTaGCGGAGCCCACTTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: EGHIVSTLRMNVSYAIFLLAPFK*RSPLCP Trigger: TGGGCAAAGTGGGCTCCGCCACTTGAACGGAGCAAG...GAGAAAAATTGCATAAGAGACATTCATCCTTAAGGTAGAGACTATGTGACCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR TCA 90 bp | ATAGAGAAGCGCTGTGTCTATGGTCGTAAGTACAAAGAAAGAATGGTGATAAGCCGACTGCTGAGCCACTaGGGATGTGATGTGTTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: IEKRCVYGRKYKERMVISRLLSH*GCDVFL Trigger: AAGGAACACATCACATCCTCAGTGGCTCAGCAGTCG...GCTTATCACCATTCTTTCTTTGTACTTACGACCATAGACACAGCGCTTCTCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR TCA 90 bp | GACTTCAAATTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCAGGACAGTGGCAGGCATCTaGCCATCGCCTTTATGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DFKFLYHYQTQLHEKLPRTVAGI*PSPLWG Trigger: TCCCCATAAAGGCGATGGTCAGATGCCTGCCACTGT...CCTGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAATTTGAAGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR TCA 90 bp | GCCAGAATAGAGAAGCGCTGTGTCTATGGTCGTAAGTACAAAGAAAGAATGGTGAAGACCAAATCCCCTTaGGATGCCCATGAGGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: ARIEKRCVYGRKYKERMVKTKSP*DAHEET Trigger: AGTTTCCTCATGGGCATCTCAAGGGGATTTGGTCTT...CACCATTCTTTCTTTGTACTTACGACCATAGACACAGCGCTTCTCTATTCTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR GCA 90 bp | TATCAAACACAGTTGCATGAAAAACTTCCCAGGAGTCTAAAACTTAGTGGCACCGCCCATGAGGAAACTTaGATATCTGGGGGCAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: YQTQLHEKLPRSLKLSGTAHEET*ISGGNV Trigger: GACGTTGCCCCCAGATATGCAAGTTTCCTCATGGGC...GGTGCCACTAAGTTTTAGACTCCTGGGAAGTTTTTCATGCAACTGTGTTTGATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CCA 90 bp | TCTGCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCCAGAATAGAGAAGCGTGCATGGGTGATGCATaGGGTCATCATAAATCACCG | + |
|
Preference number: 4 (lower is better) Translates to: SAFEDLWKMLAPSQNREACMGDA*GHHKSP Trigger: CGGTGATTTATGATGACCCCATGCATCACCCATGCA...CGCTTCTCTATTCTGGCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR TCA 90 bp | TCTCAGCATCACTCTCAGTACCTGACACCAACTATTATCCTTACAACTTCTGGTCATCATAAATCACCGTaGACCACAGGACACAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQHHSQYLTPTIILTTSGHHKSP*TTGHSR Trigger: TCTGCTGTGTCCTGTGGTTCACGGTGATTTATGATG...ACCAGAAGTTGTAAGGATAATAGTTGGTGTCAGGTACTGAGAGTGATGCTGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR TCA 90 bp | TATCAAACACAGTTGCATGAAAAACTTCCCAGGAGTCTAAAACTTAGTGGCACCGAGCCACTGAGGATGTaGTGTGTTCCTTTTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: YQTQLHEKLPRSLKLSGTEPLRM*CVPFPS Trigger: TGAGGGAAAAGGAACACATCACATCCTCAGTGGCTC...GGTGCCACTAAGTTTTAGACTCCTGGGAAGTTTTTCATGCAACTGTGTTTGATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR GCA 90 bp | ATAGAGAAGCGCTGTGTCTATGGTCGTAAGTACAAAGAAAGAATGGTGATAAGCCTCAGGCTCACACGCTaGGTTATCATGGTGAAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IEKRCVYGRKYKERMVISLRLTR*VIMVKL Trigger: CAACTTCACCATGATAACGCAGCGTGTGAGCCTGAG...GCTTATCACCATTCTTTCTTTGTACTTACGACCATAGACACAGCGCTTCTCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR GCA 90 bp | TTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCAGGAGTCTAAAATGCCCTGGGTCTCTGTaGTCCACTGATAGACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FLYHYQTQLHEKLPRSLKCPGSL*STDRQQ Trigger: CTGCTGTCTATCAGTGGAGCACAGAGACCCAGGGCA...TTTTAGACTCCTGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CCA 90 bp | TTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCAGGAGTCTAAAAGAAAATGGCCCACAGTaGCAGGCATCTGACCATCGC | + |
|
Preference number: 4 (lower is better) Translates to: FLYHYQTQLHEKLPRSLKENGPQ*QASDHR Trigger: GCGATGGTCAGATGCCTGCCACTGTGGGCCATTTTC...TTTTAGACTCCTGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR TCA 90 bp | GCCAGAATAGAGAAGCGCTGTGTCTATGGTCGTAAGTACAAAGAAAGAATGGTGTCGGTAGGTATGTTATaGTTATGGTGCAAAGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARIEKRCVYGRKYKERMVSVGML*LWCKAR Trigger: TCTGGCTTTGCACCATAATCATAACATACCTACCGA...CACCATTCTTTCTTTGTACTTACGACCATAGACACAGCGCTTCTCTATTCTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR TCA 90 bp | ACTCCCACGACTTTGTTTTGCCACTATTTACCAGCATATCGTTCAAGCAGATCGAGGAAATCTGCCATCTaGCCTCCTAAAATTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: TPTTLFCHYLPAYRSSRSRKSAI*PPKIVQ Trigger: CTGTACAATTTTAGGAGGTCAGATGGCAGATTTCCT...CGATCTGCTTGAACGATATGCTGGTAAATAGTGGCAAAACAAAGTCGTGGGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR TCA 90 bp | CTAATGGACCTTAGTTTTAGCTGTCTCTCCCCATATTTCCTCTTATCCACTTCTTGCTGGTCCCAGGAATaGGTATCAGCAAAACAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LMDLSFSCLSPYFLLSTSCWSQE*VSAKQW Trigger: CCATTGTTTTGCTGATACTCATTCCTGGGACCAGCA...AGAAGTGGATAAGAGGAAATATGGGGAGAGACAGCTAAAACTAAGGTCCATTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR TCA 90 bp | AGAAAGAATGGTGATAAGCAAAGTATGTTAAGGGTCAGCACTTTGGTTGGTCTCAAGACCAAATCCCCTTaGGATGCCCATGAGGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: RKNGDKQSMLRVSTLVGLKTKSP*DAHEET Trigger: AGTTTCCTCATGGGCATCTCAAGGGGATTTGGTCTT...GAGACCAACCAAAGTGCTGACCCTTAACATACTTTGCTTATCACCATTCTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR GCA 90 bp | TTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCAGGAGTCTAAAACCAGCGCCAAGGATCTaGTTTGCTCCAAATATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLYHYQTQLHEKLPRSLKPAPRI*FAPNIP Trigger: GGGGATATTTGGAGCAAAGCAGATCCTTGGCGCTGG...TTTTAGACTCCTGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR GCA 90 bp | GCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCCAGAATAGAGAAGCGCTGCAGCAAAACAATGGTTaGTATGTAACTGGAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AFEDLWKMLAPSQNREALQQNNG*YVTGSH Trigger: GTGACTTCCAGTTACATAGCAACCATTGTTTTGCTG...CAGCGCTTCTCTATTCTGGCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CCA 90 bp | TCTCAGCATCACTCTCAGTACCTGACACCAACTATTATCCTTACAACTTCTGGTTGGTTGCTATGTAACTaGAAGTCACAAAAGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQHHSQYLTPTIILTTSGWLLCN*KSQKAG Trigger: CCCTGCCTTTTGTGACTTCCAGTTACATAGCAACCA...ACCAGAAGTTGTAAGGATAATAGTTGGTGTCAGGTACTGAGAGTGATGCTGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR TCA 90 bp | ATAGAGAAGCGCTGTGTCTATGGTCGTAAGTACAAAGAAAGAATGGTGATAAGCCACATTCCTCCATCCTaGTTCAGAATCCTGACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IEKRCVYGRKYKERMVISHIPPS*FRILTD Trigger: ATCAGTCAGGATTCTGAATCAGGATGGAGGAATGTG...GCTTATCACCATTCTTTCTTTGTACTTACGACCATAGACACAGCGCTTCTCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099697.3 |
||
| CDS-3UTR GCA 90 bp | TTGACTTCAAATTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCACCAGCGCCAAGGATCTaGTTTGCTCCAAATATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LTSNSSTIIKHSCMKNFPPAPRI*FAPNIP Trigger: GGGGATATTTGGAGCAAAGCAGATCCTTGGCGCTGG...TGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAATTTGAAGTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR GCA 90 bp | GCCAGAATAGAGAAGCGCTGTGTCTATGGTCGTAAGTACAAAGAAAGAATGGTGCAGCAAAACAATGGTTaGTATGTAACTGGAAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: ARIEKRCVYGRKYKERMVQQNNG*YVTGSH Trigger: GTGACTTCCAGTTACATAGCAACCATTGTTTTGCTG...CACCATTCTTTCTTTGTACTTACGACCATAGACACAGCGCTTCTCTATTCTGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CCA 90 bp | GAGGGTCACATAGTCTCTACCTTAAGGATGAATGTCTCTTATGCAATTTTTCTCTTGATTCCTCTGCTCTaGTTGCTGAGGAGATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EGHIVSTLRMNVSYAIFLLIPLL*LLRRSI Trigger: GATGGATCTCCTCAGCAACCAGAGCAGAGGAATCAA...GAGAAAAATTGCATAAGAGACATTCATCCTTAAGGTAGAGACTATGTGACCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR CCA 90 bp | TTCAAATTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCAGGAGTAAAGTCAGCAGCCAGTaGAGTAAACAGCGTGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: FKFLYHYQTQLHEKLPRSKVSSQ*SKQREQ Trigger: CTGCTCACGCTGTTTACTCCACTGGCTGCTGACTTT...ACTCCTGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAATTTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| 3UTR CAA 72 bp | TTCTATGTGGGCACCAGTACAACTTTTCAGTGTTCATaGAGTAATGTAGGTGTTGTTTTCAGCAATAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FYVGTSTTFQCS*SNVGVVFSNRA Trigger: GGCCCTATTGCTGAAAACAACACCTACATTACTCAATGAACACTGAAAAGTTGTACTGGTGCCCACATAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR TCA 90 bp | TTCAAATTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCAGGAGTCCTGATTCAGAATCCTaGCTGATAAGGAATCCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FKFLYHYQTQLHEKLPRSPDSES*LIRNPV Trigger: CACCGGATTCCTTATCAGTCAGGATTCTGAATCAGG...ACTCCTGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAATTTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099697.3 |
||
| CDS-3UTR GCA 90 bp | GTTTTATTTGGTGGTAGAAGATGCCTAGTTAGAGCTTTGTCTCCCATTTCATGGAGCAGACACAGCCAATaGTACCAAAGATGTAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLFGGRRCLVRALSPISWSRHSQ*YQRCRR Trigger: TCTTCTACATCTTTGGTAGCATTGGCTGTGTCTGCT...CCATGAAATGGGAGACAAAGCTCTAACTAGGCATCTTCTACCACCAAATAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR CCA 90 bp | TTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCAGGAGTCTAAAATTGATTCCTCTGCTCTaGTTGCTGAGGAGATCCATC | + |
|
Preference number: 4 (lower is better) Translates to: FLYHYQTQLHEKLPRSLKLIPLL*LLRRSI Trigger: GATGGATCTCCTCAGCAACCAGAGCAGAGGAATCAA...TTTTAGACTCCTGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CCA 90 bp | GTTTTGAGATGTTCACTTTGCCCTTTCTGGTATCTATTCAATCTCTCTTTCTGTTGCATGGGTGATGCATaGGGTCATCATAAATCACCG | + |
|
Preference number: 4 (lower is better) Translates to: VLRCSLCPFWYLFNLSFCCMGDA*GHHKSP Trigger: CGGTGATTTATGATGACCCCATGCATCACCCATGCA...ACAGAAAGAGAGATTGAATAGATACCAGAAAGGGCAAAGTGAACATCTCAAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR TCA 90 bp | TTGACTTCAAATTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCACATCATAAATCACCGTaGACCACAGGACACAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTSNSSTIIKHSCMKNFPHHKSP*TTGHSR Trigger: TCTGCTGTGTCCTGTGGTTCACGGTGATTTATGATG...TGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAATTTGAAGTCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| 3UTR CAA 72 bp | ATACGTCAGATAGTTAGTTACTCCCACGACTTTGTTTaGCCACTATTTACCAGCATATCGTTCAAGCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: IRQIVSYSHDFV*PLFTSISFKQI Trigger: GATCTGCTTGAACGATATGCTGGTAAATAGTGGCAAAACAAAGTCGTGGGAGTAACTAACTATCTGACGTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR TCA 90 bp | TATCAAACACAGTTGCATGAAAAACTTCCCAGGAGTCTAAAACTTAGTGGCACCCTGCTTGTCCAAATATaGGATAAAAGATCAGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: YQTQLHEKLPRSLKLSGTLLVQI*DKRSDQ Trigger: TTGGTCTGATCTTTTATCTCATATTTGGACAAGCAG...GGTGCCACTAAGTTTTAGACTCCTGGGAAGTTTTTCATGCAACTGTGTTTGATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099697.3 |
||
| CDS-3UTR GCA 90 bp | TTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCAGGAGTCTAAAAAGCAGACACAGCCAATaGTACCAAAGATGTAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLYHYQTQLHEKLPRSLKSRHSQ*YQRCRR Trigger: TCTTCTACATCTTTGGTAGCATTGGCTGTGTCTGCT...TTTTAGACTCCTGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR GCA 90 bp | GACTTCAAATTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCAGGCCAGCTCTGGATTTCTaGTTGTCCAAATATGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: DFKFLYHYQTQLHEKLPRPALDF*LSKYEI Trigger: TATCTCATATTTGGACAAGCAGAAATCCAGAGCTGG...CCTGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAATTTGAAGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099697.3 |
||
| CDS-3UTR CCA 90 bp | TTGACTTCAAATTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCATGGTTGCTATGTAACTaGAAGTCACAAAAGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LTSNSSTIIKHSCMKNFPWLLCN*KSQKAG Trigger: CCCTGCCTTTTGTGACTTCCAGTTACATAGCAACCA...TGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAATTTGAAGTCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR TCA 90 bp | TTGACTTCAAATTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCAAGGAAATCTGCCATCTaGCCTCCTAAAATTGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: LTSNSSTIIKHSCMKNFPRKSAI*PPKIVQ Trigger: CTGTACAATTTTAGGAGGTCAGATGGCAGATTTCCT...TGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAATTTGAAGTCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| 3UTR CAA 72 bp | ATTGACTTCAAATTCCTCTACCATTATCAAACACAGTaGCATGAAAAACTTCCCAGGAGTCTAAAACTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: IDFKFLYHYQTQ*HEKLPRSLKLS Trigger: ACTAAGTTTTAGACTCCTGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAATTTGAAGTCAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS CCA 90 bp | GTTGCTGAGGAGATCCATCACAGGCCCCTCCGTGGACGCATTAGCTaGGTCCTGATGCTGTGTGCTGTTCACCATGGCAATGATGGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: VAEEIHHRPLRGRIS*VLMLCAVHHGNDGN Trigger: ATTGCCATCATTGCCATGGTGAACAGCACACAGCATCAGGACCCAGCTAATGCGTCCACGGAGGGGCCTGTGATGGATCTCCTCAGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS TCA 90 bp | GGACAGACCTTCTGGGAGAACTCGACTGCTGAGCCACTGAGGATGTaGTGTGTTCCTTTTCCCTCACACTTATGCATGGGTGATGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: GQTFWENSTAEPLRM*CVPFPSHLCMGDAW Trigger: CCATGCATCACCCATGCATAAGTGTGAGGGAAAAGGAACACATCACATCCTCAGTGGCTCAGCAGTCGAGTTCTCCCAGAAGGTCTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CAA 90 bp | GAGGGTAGCCTGGGATCTGCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCCCTGAGTCACACAAATaGCTGGTCCCAGGAATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: EGSLGSAFEDLWKMLAPSPESHK*LVPGMS Trigger: ACTCATTCCTGGGACCAGCAATTTGTGTGACTCAGG...GCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGCAGATCCCAGGCTACCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CAA 90 bp | GAGGGTAGCCTGGGATCTGCTTTTGAAGATCTTTGGAAAATGCTAGCACCCAGCATCAGACCAAACATGTaGACAGCAGCAGACAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: EGSLGSAFEDLWKMLAPSIRPNM*TAADRK Trigger: TTTCCTGTCTGCTGCTGTCAACATGTTTGGTCTGAT...GCTGGGTGCTAGCATTTTCCAAAGATCTTCAAAAGCAGATCCCAGGCTACCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099697.3 |
||
| CDS GCA 90 bp | ACACAAATTGCTGGTCCCAGGAATGAGTATCAGCAAAACAATGGTTaGTATGTAACTGGAAGTCACAAAAGGCAGGGCCACAGCGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TQIAGPRNEYQQNNG*YVTGSHKRQGHSAK Trigger: CTTTGCGCTGTGGCCCTGCCTTTTGTGACTTCCAGTTACATAGCAACCATTGTTTTGCTGATACTCATTCCTGGGACCAGCAATTTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CAA 90 bp | GCCAGAATAGAGAAGCGCTGTGTCTATGGTCGTAAGTACAAAGAAAGAATGGTGATTCCTCTGCTCTGGTaGCTGAGGAGATCCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: ARIEKRCVYGRKYKERMVIPLLW*LRRSIT Trigger: TGTGATGGATCTCCTCAGCAACCAGAGCAGAGGAAT...CACCATTCTTTCTTTGTACTTACGACCATAGACACAGCGCTTCTCTATTCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CAA 90 bp | TTCTATATGACCCTTCTAATGGACCTTAGTTTTAGCTGTCTCTCCCCATATTTCGCAATGCTGGTGAGCTaGCTCCGTTCAAGTGGCGGA | + |
|
Preference number: 5 (lower is better) Translates to: FYMTLLMDLSFSCLSPYFAMLVS*LRSSGG Trigger: TCCGCCACTTGAACGGAGCAAGCTCACCAGCATTGC...GAAATATGGGGAGAGACAGCTAAAACTAAGGTCCATTAGAAGGGTCATATAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR CAA 90 bp | GCCAGAATAGAGAAGCGCTGTGTCTATGGTCGTAAGTACAAAGAAAGAATGGTGGCAACGTCTAGGGTGTaGATGATGAACCCTGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: ARIEKRCVYGRKYKERMVATSRV*MMNPES Trigger: TGACTCAGGGTTCATCATCAACACCCTAGACGTTGC...CACCATTCTTTCTTTGTACTTACGACCATAGACACAGCGCTTCTCTATTCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS TCA 90 bp | GTGATTAAGCTGAGAAGATTCCTGGAGAGAAGGAAATCTGCCATCTaGCCTCCTAAAATTGTACAGCTTGAGGCAGCAATGAAAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VIKLRRFLERRKSAI*PPKIVQLEAAMKGR Trigger: CCTGCCTTTCATTGCTGCCTCAAGCTGTACAATTTTAGGAGGTCAGATGGCAGATTTCCTTCTCTCCAGGAATCTTCTCAGCTTAATCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CAA 90 bp | TCTCAGCATCACTCTCAGTACCTGACACCAACTATTATCCTTACAACTTCTGGTATTCCTCTGCTCTGGTaGCTGAGGAGATCCATCACA | + |
|
Preference number: 5 (lower is better) Translates to: SQHHSQYLTPTIILTTSGIPLLW*LRRSIT Trigger: TGTGATGGATCTCCTCAGCAACCAGAGCAGAGGAAT...ACCAGAAGTTGTAAGGATAATAGTTGGTGTCAGGTACTGAGAGTGATGCTGAGA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR CAA 90 bp | GTTTTATTTGGTGGTAGAAGATGCCTAGTTAGAGCTTTGTCTCCCATTTCATGGGCAACGTCTAGGGTGTaGATGATGAACCCTGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VLFGGRRCLVRALSPISWATSRV*MMNPES Trigger: TGACTCAGGGTTCATCATCAACACCCTAGACGTTGC...CCATGAAATGGGAGACAAAGCTCTAACTAGGCATCTTCTACCACCAAATAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR CAA 90 bp | GACTTCAAATTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCAGGCGGGTACTAAAGTCCTaGATTCCTCTGCTCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: DFKFLYHYQTQLHEKLPRRVLKS*IPLLWL Trigger: CAACCAGAGCAGAGGAATCAAGGACTTTAGTACCCG...CCTGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAATTTGAAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CAA 90 bp | TTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCAGGAGTCTAAAACGGGTACTAAAGTCCTaGATTCCTCTGCTCTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLYHYQTQLHEKLPRSLKRVLKS*IPLLWL Trigger: CAACCAGAGCAGAGGAATCAAGGACTTTAGTACCCG...TTTTAGACTCCTGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CAA 90 bp | TATCAAACACAGTTGCATGAAAAACTTCCCAGGAGTCTAAAACTTAGTGGCACCTCTGACCTCCTAAAATaGTACAGCTTGAGGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: YQTQLHEKLPRSLKLSGTSDLLK*YSLRQQ Trigger: TTGCTGCCTCAAGCTGTACAATTTTAGGAGGTCAGA...GGTGCCACTAAGTTTTAGACTCCTGGGAAGTTTTTCATGCAACTGTGTTTGATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CAA 90 bp | TTGACTTCAAATTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCACCTGAGTCACACAAATaGCTGGTCCCAGGAATGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LTSNSSTIIKHSCMKNFPPESHK*LVPGMS Trigger: ACTCATTCCTGGGACCAGCAATTTGTGTGACTCAGG...TGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAATTTGAAGTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CAA 90 bp | TTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCAGGAGTCTAAAATCTGACCTCCTAAAATaGTACAGCTTGAGGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: FLYHYQTQLHEKLPRSLKSDLLK*YSLRQQ Trigger: TTGCTGCCTCAAGCTGTACAATTTTAGGAGGTCAGA...TTTTAGACTCCTGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS-3UTR CAA 90 bp | CTAATGGACCTTAGTTTTAGCTGTCTCTCCCCATATTTCCTCTTATCCACTTCTTCAGCAAAACAATGGTaGCTATGTAACTGGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LMDLSFSCLSPYFLLSTSSAKQW*LCNWKS Trigger: TGACTTCCAGTTACATAGCAACCATTGTTTTGCTGA...AGAAGTGGATAAGAGGAAATATGGGGAGAGACAGCTAAAACTAAGGTCCATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR CAA 90 bp | GACTTCAAATTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCAGGTCAGAATCCTGCCACTaGCAGATGTTCAATAACATG | + |
|
Preference number: 5 (lower is better) Translates to: DFKFLYHYQTQLHEKLPRSESCH*QMFNNM Trigger: CATGTTATTGAACATCTGCAAGTGGCAGGATTCTGA...CCTGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAATTTGAAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006786.11 |
||
| CDS-3UTR CAA 90 bp | TTGACTTCAAATTCCTCTACCATTATCAAACACAGTTGCATGAAAAACTTCCCATCAGCAAAACAATGGTaGCTATGTAACTGGAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LTSNSSTIIKHSCMKNFPSAKQW*LCNWKS Trigger: TGACTTCCAGTTACATAGCAACCATTGTTTTGCTGA...TGGGAAGTTTTTCATGCAACTGTGTTTGATAATGGTAGAGGAATTTGAAGTCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS TCA 72 bp | AGGACCCAAACGCTGCCCCTGAACCCGCAATGCTGGTaGGCTTGCTCCGTTCAAGTGGCGGAGCCCACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: RTQTLPLNPQCW*ACSVQVAEPTL Trigger: CAAAGTGGGCTCCGCCACTTGAACGGAGCAAGCTCACCAGCATTGCGGGTTCAGGGGCAGCGTTTGGGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS CCA 72 bp | GCAGCCCGGGTACTAAAGTCCTTGATTCCTCTGCTCTaGTTGCTGAGGAGATCCATCACAGGCCCCTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: AARVLKSLIPLL*LLRRSITGPSV Trigger: CACGGAGGGGCCTGTGATGGATCTCCTCAGCAACCAGAGCAGAGGAATCAAGGACTTTAGTACCCGGGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS TCA 72 bp | ATCACAGGCCCCTCCGTGGACGCATTAGCTGGGTCCTaGTGCTGTGTGCTGTTCACCATGGCAATGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: ITGPSVDALAGS*CCVLFTMAMMA Trigger: TGCCATCATTGCCATGGTGAACAGCACACAGCATCAGGACCCAGCTAATGCGTCCACGGAGGGGCCTGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS TCA 72 bp | GTCAGCAGCCAGTGGAGTAAACAGCGTGAGCAGGGATaGGATGAGCAACCCAGCGCCAAGGATCTGCTTTGC | + |
|
Preference number: 6 (lower is better) Translates to: VSSQWSKQREQG*DEQPSAKDLLC Trigger: GCAAAGCAGATCCTTGGCGCTGGGTTGCTCATCTCATCCCTGCTCACGCTGTTTACTCCACTGGCTGCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS GCA 72 bp | GGTGAGCTTGCTCCGTTCAAGTGGCGGAGCCCACTTTaGCCAAATTGTGAACTGACCAGTCCAGGCCATTCC | + |
|
Preference number: 6 (lower is better) Translates to: GELAPFKWRSPL*PNCELTSPGHS Trigger: GGAATGGCCTGGACTGGTCAGTTCACAATTTGGGCAAAGTGGGCTCCGCCACTTGAACGGAGCAAGCTCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS TCA 72 bp | CTGGGTCCTGATGCTGTGTGCTGTTCACCATGGCAATaGTGGCAATGCTCAGGCTCACACGCTGCGTTATCA | + |
|
Preference number: 6 (lower is better) Translates to: LGPDAVCCSPWQ*WQCSGSHAALS Trigger: TGATAACGCAGCGTGTGAGCCTGAGCATTGCCATCATTGCCATGGTGAACAGCACACAGCATCAGGACCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS TCA 72 bp | TTTATGGGGACAGACCTTCTGGGAGAACTCGACTGCTaGGCCACTGAGGATGTGATGTGTTCCTTTTCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FMGTDLLGELDC*ATEDVMCSFSL Trigger: GAGGGAAAAGGAACACATCACATCCTCAGTGGCTCAGCAGTCGAGTTCTCCCAGAAGGTCTGTCCCCATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS GCA 72 bp | GCTGGTCCCAGGAATGAGTATCAGCAAAACAATGGTTaGTATGTAACTGGAAGTCACAAAAGGCAGGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AGPRNEYQQNNG*YVTGSHKRQGH Trigger: GTGGCCCTGCCTTTTGTGACTTCCAGTTACATAGCAACCATTGTTTTGCTGATACTCATTCCTGGGACCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS CAA 72 bp | AGGAAACTTGCATATCTGGGGGCAACGTCTAGGGTGTaGATGATGAACCCTGAGTCACACAAATTGCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RKLAYLGATSRV*MMNPESHKLLV Trigger: GACCAGCAATTTGTGTGACTCAGGGTTCATCATCAACACCCTAGACGTTGCCCCCAGATATGCAAGTTTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS CAA 90 bp | GGGGCAACGTCTAGGGTGTTGATGATGAACCCTGAGTCACACAAATaGCTGGTCCCAGGAATGAGTATCAGCAAAACAATGGTTGCTATG | + |
|
Preference number: 6 (lower is better) Translates to: GATSRVLMMNPESHK*LVPGMSISKTMVAM Trigger: CATAGCAACCATTGTTTTGCTGATACTCATTCCTGGGACCAGCAATTTGTGTGACTCAGGGTTCATCATCAACACCCTAGACGTTGCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||
| CDS CAA 72 bp | TCTAGGGTGTTGATGATGAACCCTGAGTCACACAAATaGCTGGTCCCAGGAATGAGTATCAGCAAAACAATG | + |
|
Preference number: 6 (lower is better) Translates to: SRVLMMNPESHK*LVPGMSISKTM Trigger: CATTGTTTTGCTGATACTCATTCCTGGGACCAGCAATTTGTGTGACTCAGGGTTCATCATCAACACCCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006786.11 ENSMUST00000099697.3 |
||