Pregenerated sensors for SLC17A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021335Ensembl transcript IDs: ENSMUST00000006785.8, ENSMUST00000110413.8, ENSMUST00000130211.8
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCCTCATaGTACCTGTCTCCAGGTGTTCACGACTCTCCCAGGACTGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: ITQTEVGATERSGAS*YLSPGVHDSPRTAV Trigger: GACTGCAGTCCTGGGAGAGTCGTGAACACCTGGAGACAGGTAGCATGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| 3UTR TCA 90 bp | TACCTGTCTCCAGGTGTTCACGACTCTCCCAGGACTGCAGTCCCATaGAGGATCCTCTTTCTTTCTATAAGGATGCTGACCTCAGGCTTC | + |
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Preference number: 1 (lower is better) Translates to: YLSPGVHDSPRTAVP*RILFLSIRMLTSGF Trigger: GAAGCCTGAGGTCAGCATCCTTATAGAAAGAAAGAGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCGTGAACACCTGGAGACAGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGTCTCCAGGTGTTCACGACTCTCCCAGGACTGCAGTCCCATGAAGGATCCTGTCTTTCTTGTCCAGTaGAAGGTTATCAATGCCATT | + |
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Preference number: 2 (lower is better) Translates to: PVSRCSRLSQDCSPMKDPVFLVQ*KVINAI Trigger: AATGGCATTGATAACCTTTCACTGGACAAGAAAGAC...AGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCGTGAACACCTGGAGACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| 3UTR-3UTR GCA 90 bp | AATACACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCACGACTCTCCCAGGACTaGAGTCCCATGAAGGATCCT | + |
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Preference number: 2 (lower is better) Translates to: NTQCKRITQTEVGATERSRLSQD*SPMKDP Trigger: AGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCG...TGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| 3UTR-3UTR GCA 90 bp | TACAATACACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTCGACTCTCCCAGGACTaGAGTCCCATGAAGGATCCT | + |
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Preference number: 2 (lower is better) Translates to: YNTQCKRITQTEVGATERRLSQD*SPMKDP Trigger: AGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCG...ACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTGTATTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| 3UTR-3UTR TCA 90 bp | GAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCCTCATGCTACCGTCTTTCTTGTCCAGTaGAAGGTTATCAATGCCATT | + |
|
Preference number: 2 (lower is better) Translates to: ESLRQKWVRLSVQEPHATVFLVQ*KVINAI Trigger: AATGGCATTGATAACCTTTCACTGGACAAGAAAGAC...GGTAGCATGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCCTCAACAGAGAGATGTCACTaGAGAGTCCAACACTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: CKRITQTEVGATERSGASTERCH*RVQHFR Trigger: TCTGAAGTGTTGGACTCTTCAGTGACATCTCTCTGT...TGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGACAGAGAGATGTCACTaGAGAGTCCAACACTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: HSAKESLRQKWVRLSVQETERCH*RVQHFR Trigger: TCTGAAGTGTTGGACTCTTCAGTGACATCTCTCTGT...CTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| 3UTR-3UTR GCA 90 bp | GAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCCTCATGCTACCGTGAAAGGTTATCAATaGCATTTTCACATGTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: ESLRQKWVRLSVQEPHATVKGYQ*HFHMSS Trigger: GGAAGACATGTGAAAATGGCATTGATAACCTTTCAC...GGTAGCATGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| 3UTR-3UTR GCA 90 bp | AATACACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGTGAAAGGTTATCAATaGCATTTTCACATGTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: NTQCKRITQTEVGATERSVKGYQ*HFHMSS Trigger: GGAAGACATGTGAAAATGGCATTGATAACCTTTCAC...TGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| 3UTR GCA 72 bp | ACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCCTCATaGTACCTGTCTCCAGGTGTTCACGACTCTCCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TEVGATERSGAS*YLSPGVHDSPR Trigger: CCTGGGAGAGTCGTGAACACCTGGAGACAGGTAGCATGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| 3UTR TCA 72 bp | GTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTaGGCGTTCAGGAGCCTCATGCTACCTGTCTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: VQKNHSDRSGCD*AFRSLMLPVSR Trigger: CCTGGAGACAGGTAGCATGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| 3UTR TCA 72 bp | CCAGGTGTTCACGACTCTCCCAGGACTGCAGTCCCATaGAGGATCCTCTTTCTTTCTATAAGGATGCTGACC | + |
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Preference number: 3 (lower is better) Translates to: PGVHDSPRTAVP*RILFLSIRMLT Trigger: GGTCAGCATCCTTATAGAAAGAAAGAGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCGTGAACACCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| 3UTR TCA 72 bp | TGTAGAAAAAGGAAACAAAACACAGAGAGATGTCACTaGAGAGTCCAACACTTCAGAGACATTAGTCTAGGC | + |
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Preference number: 3 (lower is better) Translates to: CRKRKQNTERCH*RVQHFRDISLG Trigger: GCCTAGACTAATGTCTCTGAAGTGTTGGACTCTTCAGTGACATCTCTCTGTGTTTTGTTTCCTTTTTCTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR TCA 90 bp | CATGCTACCTGTCTCCAGGTGTTCACGACTCTCCCAGGACTGCAGTCCCATGAACAGGGATTGTCTGCCTaGGCTGGCCTGTTGCATGAG | + |
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Preference number: 4 (lower is better) Translates to: HATCLQVFTTLPGLQSHEQGLSA*AGLLHE Trigger: CTCATGCAACAGGCCAGCTCAGGCAGACAATCCCTG...TTCATGGGACTGCAGTCCTGGGAGAGTCGTGAACACCTGGAGACAGGTAGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR TCA 90 bp | GAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCCTCATGCTACCTTCATGCTGGCCTGTTaGCACTGTTCCCTGGGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: ESLRQKWVRLSVQEPHATFMLAC*HCSLGY Trigger: ATAGCCCAGGGAACAGTGTCAACAGGCCAGCATGAA...GGTAGCATGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR TCA 90 bp | CCTGTCTCCAGGTGTTCACGACTCTCCCAGGACTGCAGTCCCATGAAGGATCCTAAGAAGTCTGACATCTaGCCTGCTAGGATACCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PVSRCSRLSQDCSPMKDPKKSDI*PARIPQ Trigger: CTGTGGTATCCTAGCAGGTCAGATGTCAGACTTCTT...AGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCGTGAACACCTGGAGACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR TCA 90 bp | CATGCTACCTGTCTCCAGGTGTTCACGACTCTCCCAGGACTGCAGTCCCATGAACAACCCAGCAAGAGTTaGAGAAATCAGGCCCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: HATCLQVFTTLPGLQSHEQPSKS*RNQAPK Trigger: TTTGGGGGCCTGATTTCTTCAACTCTTGCTGGGTTG...TTCATGGGACTGCAGTCCTGGGAGAGTCGTGAACACCTGGAGACAGGTAGCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR GCA 90 bp | TGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCCTCATTGGCAGGGATTGTCTaGCTGAGCTGGCCTGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CKRITQTEVGATERSGASLAGIV*LSWPVA Trigger: TGCAACAGGCCAGCTCAGGCAGACAATCCCTGCCAA...TGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CCA 90 bp | GAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCCTCATGCTACCCTGCTCATATACGGGTaGTCCTTGGGGTCATCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ESLRQKWVRLSVQEPHATLLIYG*SLGSSK Trigger: CTTTGATGACCCCAAGGACCACCCGTATATGAGCAG...GGTAGCATGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR TCA 90 bp | CATGCTACCTGTCTCCAGGTGTTCACGACTCTCCCAGGACTGCAGTCCCATGAAAGGACATCAAAGAGCTaGGGAACAGTGAAGACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: HATCLQVFTTLPGLQSHERTSKS*GTVKTQ Trigger: TTGGGTCTTCACTGTTCCTCAGCTCTTTGATGTCCT...TTCATGGGACTGCAGTCCTGGGAGAGTCGTGAACACCTGGAGACAGGTAGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR TCA 90 bp | TCACGACTCTCCCAGGACTGCAGTCCCATGAAGGATCCTCTTTCTTTCTATAAGCAGGGATTGTCTGCCTaGGCTGGCCTGTTGCATGAG | + |
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Preference number: 4 (lower is better) Translates to: SRLSQDCSPMKDPLSFYKQGLSA*AGLLHE Trigger: CTCATGCAACAGGCCAGCTCAGGCAGACAATCCCTG...CTTATAGAAAGAAAGAGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CCA 90 bp | GAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCCTCATGCTACCTTCAGGCACACTCTCTaGGCCATGATGGCAATGTTA | + |
|
Preference number: 4 (lower is better) Translates to: ESLRQKWVRLSVQEPHATFRHTL*AMMAML Trigger: TAACATTGCCATCATGGCCCAGAGAGTGTGCCTGAA...GGTAGCATGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR TCA 90 bp | ACACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAAGGGAGGTGCCCATTTaGCCCATATTTCATGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: TQCKRITQTEVGATERSGREVPI*PIFHAG Trigger: GCCAGCATGAAATATGGGTCAAATGGGCACCTCCCT...TCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR TCA 90 bp | CACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCAACCCAGCAAGAGTTaGAGAAATCAGGCCCCCAAA | + |
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Preference number: 4 (lower is better) Translates to: HSAKESLRQKWVRLSVQEQPSKS*RNQAPK Trigger: TTTGGGGGCCTGATTTCTTCAACTCTTGCTGGGTTG...CTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR GCA 90 bp | TACAATACACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTAGCAGCTCCGACTTGTaGAGCAGGTGGGAGGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: YNTQCKRITQTEVGATERSSSDL*SRWEEQ Trigger: TTGCTCCTCCCACCTGCTGCACAAGTCGGAGCTGCT...ACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTGTATTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR GCA 90 bp | CACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGAGTCCTTCTCACTGCTaGTCATATACGGGTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: HSAKESLRQKWVRLSVQESPSHC*SYTGGP Trigger: AGGACCACCCGTATATGAGCAGCAGTGAGAAGGACT...CTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR GCA 90 bp | ACACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGACCTGAGCTGGCCTGTTaGATGAGGGAGGATATGATG | + |
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Preference number: 4 (lower is better) Translates to: TQCKRITQTEVGATERSGPELAC*MREDMM Trigger: CATCATATCCTCCCTCATGCAACAGGCCAGCTCAGG...TCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CCA 90 bp | TGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCCTCAAGATGTAGAAGACCATaGGCCAGCCCAGAAGATCAC | + |
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Preference number: 4 (lower is better) Translates to: CKRITQTEVGATERSGASRCRRP*ASPEDH Trigger: GTGATCTTCTGGGCTGGCCCATGGTCTTCTACATCT...TGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR TCA 90 bp | TACAATACACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTCCATGGCTACCATGGTaGGGTTCAGGCACACTCTCT | + |
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Preference number: 4 (lower is better) Translates to: YNTQCKRITQTEVGATERPWLPW*GSGTLS Trigger: AGAGAGTGTGCCTGAACCTCACCATGGTAGCCATGG...ACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTGTATTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR TCA 90 bp | TCACGACTCTCCCAGGACTGCAGTCCCATGAAGGATCCTCTTTCTTTCTATAAGAGGGAGGTGCCCATTTaGCCCATATTTCATGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SRLSQDCSPMKDPLSFYKREVPI*PIFHAG Trigger: GCCAGCATGAAATATGGGTCAAATGGGCACCTCCCT...CTTATAGAAAGAAAGAGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR GCA 90 bp | ACACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAAGTCCTTCTCACTGCTaGTCATATACGGGTGGTCCT | + |
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Preference number: 4 (lower is better) Translates to: TQCKRITQTEVGATERSGSPSHC*SYTGGP Trigger: AGGACCACCCGTATATGAGCAGCAGTGAGAAGGACT...TCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR GCA 90 bp | TCACGACTCTCCCAGGACTGCAGTCCCATGAAGGATCCTCTTTCTTTCTATAAGCCTGAGCTGGCCTGTTaGATGAGGGAGGATATGATG | + |
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Preference number: 4 (lower is better) Translates to: SRLSQDCSPMKDPLSFYKPELAC*MREDMM Trigger: CATCATATCCTCCCTCATGCAACAGGCCAGCTCAGG...CTTATAGAAAGAAAGAGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR GCA 90 bp | AATACACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCATTGGCAGGGATTGTCTaGCTGAGCTGGCCTGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: NTQCKRITQTEVGATERSLAGIV*LSWPVA Trigger: TGCAACAGGCCAGCTCAGGCAGACAATCCCTGCCAA...TGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CCA 90 bp | CATGCTACCTGTCTCCAGGTGTTCACGACTCTCCCAGGACTGCAGTCCCATGAAGATTCGTTAGATAAATaGGGTGACCCTGTGTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: HATCLQVFTTLPGLQSHEDSLDK*GDPVLF Trigger: GAACAACACAGGGTCACCCCATTTATCTAACGAATC...TTCATGGGACTGCAGTCCTGGGAGAGTCGTGAACACCTGGAGACAGGTAGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR TCA 90 bp | AATACACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCATTCATGCTGGCCTGTTaGCACTGTTCCCTGGGCTAT | + |
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Preference number: 4 (lower is better) Translates to: NTQCKRITQTEVGATERSFMLAC*HCSLGY Trigger: ATAGCCCAGGGAACAGTGTCAACAGGCCAGCATGAA...TGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CCA 90 bp | CACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCTGAGAATAAGCCCTTaGATATCAGGACTCCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: HSAKESLRQKWVRLSVQELRISP*ISGLQE Trigger: TTCCTGGAGTCCTGATATCCAAGGGCTTATTCTCAG...CTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CCA 90 bp | CGACTCTCCCAGGACTGCAGTCCCATGAAGGATCCTCTTTCTTTCTATAAGGATCTGCTCATATACGGGTaGTCCTTGGGGTCATCAAAG | + |
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Preference number: 4 (lower is better) Translates to: RLSQDCSPMKDPLSFYKDLLIYG*SLGSSK Trigger: CTTTGATGACCCCAAGGACCACCCGTATATGAGCAG...ATCCTTATAGAAAGAAAGAGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR TCA 90 bp | TGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCCTCAAGAGCTGAGGAACAGTaGAGACCCAATTATTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: CKRITQTEVGATERSGASRAEEQ*RPNYSL Trigger: AAGAGAATAATTGGGTCTTCACTGTTCCTCAGCTCT...TGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR TCA 90 bp | TCACGACTCTCCCAGGACTGCAGTCCCATGAAGGATCCTCTTTCTTTCTATAAGAAGAAGTCTGACATCTaGCCTGCTAGGATACCACAG | + |
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Preference number: 4 (lower is better) Translates to: SRLSQDCSPMKDPLSFYKKKSDI*PARIPQ Trigger: CTGTGGTATCCTAGCAGGTCAGATGTCAGACTTCTT...CTTATAGAAAGAAAGAGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CCA 90 bp | TCACGACTCTCCCAGGACTGCAGTCCCATGAAGGATCCTCTTTCTTTCTATAAGTTCAGGCACACTCTCTaGGCCATGATGGCAATGTTA | + |
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Preference number: 4 (lower is better) Translates to: SRLSQDCSPMKDPLSFYKFRHTL*AMMAML Trigger: TAACATTGCCATCATGGCCCAGAGAGTGTGCCTGAA...CTTATAGAAAGAAAGAGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR TCA 90 bp | GGAAACAAAACACAGAGAGATGTCACTGAAGAGTCCAACACTTCAGAGACATTACCATGGCTACCATGGTaGGGTTCAGGCACACTCTCT | + |
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Preference number: 4 (lower is better) Translates to: GNKTQRDVTEESNTSETLPWLPW*GSGTLS Trigger: AGAGAGTGTGCCTGAACCTCACCATGGTAGCCATGG...TAATGTCTCTGAAGTGTTGGACTCTTCAGTGACATCTCTCTGTGTTTTGTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR TCA 90 bp | TGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCCTCATCTTTAGCCCAGTCCTaGATTTCTCCTTTAGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: CKRITQTEVGATERSGASSLAQS*ISPLAN Trigger: ATTTGCTAAAGGAGAAATTCAGGACTGGGCTAAAGA...TGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CCA 90 bp | ACACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGATAATGGCCCAGAGTaGAAGAGATTTAAGCATAGC | + |
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Preference number: 4 (lower is better) Translates to: TQCKRITQTEVGATERSGDNGPE*KRFKHS Trigger: GCTATGCTTAAATCTCTTCCACTCTGGGCCATTATC...TCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CCA 90 bp | TGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCCTCAGAAATCCATAATATCTaGGAGCAATATCCAAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: CKRITQTEVGATERSGASEIHNI*EQYPRH Trigger: ATGCCTTGGATATTGCTCCCAGATATTATGGATTTC...TGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR TCA 90 bp | TACAATACACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTAGAGCTGAGGAACAGTaGAGACCCAATTATTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: YNTQCKRITQTEVGATERRAEEQ*RPNYSL Trigger: AAGAGAATAATTGGGTCTTCACTGTTCCTCAGCTCT...ACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTGTATTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CCA 90 bp | AAGGATCCTCTTTCTTTCTATAAGGATGCTGACCTCAGGCTTCTCAGCTTCTCCGATTCGTTAGATAAATaGGGTGACCCTGTGTTGTTC | + |
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Preference number: 4 (lower is better) Translates to: KDPLSFYKDADLRLLSFSDSLDK*GDPVLF Trigger: GAACAACACAGGGTCACCCCATTTATCTAACGAATC...GGAGAAGCTGAGAAGCCTGAGGTCAGCATCCTTATAGAAAGAAAGAGGATCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CCA 90 bp | AAGGATCCTCTTTCTTTCTATAAGGATGCTGACCTCAGGCTTCTCAGCTTCTCCGATAATGGCCCAGAGTaGAAGAGATTTAAGCATAGC | + |
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Preference number: 4 (lower is better) Translates to: KDPLSFYKDADLRLLSFSDNGPE*KRFKHS Trigger: GCTATGCTTAAATCTCTTCCACTCTGGGCCATTATC...GGAGAAGCTGAGAAGCCTGAGGTCAGCATCCTTATAGAAAGAAAGAGGATCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CCA 90 bp | TCACGACTCTCCCAGGACTGCAGTCCCATGAAGGATCCTCTTTCTTTCTATAAGGAAATCCATAATATCTaGGAGCAATATCCAAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: SRLSQDCSPMKDPLSFYKEIHNI*EQYPRH Trigger: ATGCCTTGGATATTGCTCCCAGATATTATGGATTTC...CTTATAGAAAGAAAGAGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCGTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CAA 90 bp | CCTGTCTCCAGGTGTTCACGACTCTCCCAGGACTGCAGTCCCATGAAGGATCCTTGGGGTGACCCTGTGTaGTTCACCATGGCTACCATG | + |
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Preference number: 5 (lower is better) Translates to: PVSRCSRLSQDCSPMKDPWGDPV*FTMATM Trigger: CATGGTAGCCATGGTGAACAACACAGGGTCACCCCA...AGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCGTGAACACCTGGAGACAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CAA 90 bp | CCTGTCTCCAGGTGTTCACGACTCTCCCAGGACTGCAGTCCCATGAAGGATCCTTTTCATGCTGGCCTGTaGACACTGTTCCCTGGGCTA | + |
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Preference number: 5 (lower is better) Translates to: PVSRCSRLSQDCSPMKDPFHAGL*TLFPGL Trigger: TAGCCCAGGGAACAGTGTCAACAGGCCAGCATGAAA...AGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCGTGAACACCTGGAGACAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CAA 90 bp | GCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCCTCATAACCCTGGAACTTTCTaGGGGAGGCACTGGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: AKESLRQKWVRLSVQEPHNPGTF*GRHWFS Trigger: GGAGAACCAGTGCCTCCCCAAGAAAGTTCCAGGGTT...ATGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS GCA 90 bp | AGTCTGCCTCGTTCTAAGGGAGGTGCCCATTTGACCCATATTTCATaGTGGCCTGTTGACACTGTTCCCTGGGCTATTCCCTGGAGTACT | + |
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Preference number: 5 (lower is better) Translates to: SLPRSKGGAHLTHIS*WPVDTVPWAIPWST Trigger: AGTACTCCAGGGAATAGCCCAGGGAACAGTGTCAACAGGCCAGCATGAAATATGGGTCAAATGGGCACCTCCCTTAGAACGAGGCAGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CAA 90 bp | ACACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAAACCCTGGAACTTTCTaGGGGAGGCACTGGTTCTCC | + |
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Preference number: 5 (lower is better) Translates to: TQCKRITQTEVGATERSGNPGTF*GRHWFS Trigger: GGAGAACCAGTGCCTCCCCAAGAAAGTTCCAGGGTT...TCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CAA 90 bp | TGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCCTCAAAGGGAGGTGCCCATTaGACCCATATTTCATGCTGG | + |
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Preference number: 5 (lower is better) Translates to: CKRITQTEVGATERSGASKGGAH*THISCW Trigger: CCAGCATGAAATATGGGTCAAATGGGCACCTCCCTT...TGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CAA 90 bp | GAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCCTCATGCTACCATATACGGGTGGTCCTaGGGGTCATCAAAGAATAGA | + |
|
Preference number: 5 (lower is better) Translates to: ESLRQKWVRLSVQEPHATIYGWS*GSSKNR Trigger: TCTATTCTTTGATGACCCCAAGGACCACCCGTATAT...GGTAGCATGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CAA 90 bp | CCTGTCTCCAGGTGTTCACGACTCTCCCAGGACTGCAGTCCCATGAAGGATCCTGATTTAAGCATAGCTTaGATTGGCAGGGATTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVSRCSRLSQDCSPMKDPDLSIA*IGRDCL Trigger: CAGACAATCCCTGCCAATCAAAGCTATGCTTAAATC...AGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCGTGAACACCTGGAGACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS CCA 90 bp | GCCCATTTGACCCATATTTCATGCTGGCCTGTTGACACTGTTCCCTaGGCTATTCCCTGGAGTACTCGACACACAATGACTAAAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AHLTHISCWPVDTVP*AIPWSTRHTMTKAA Trigger: AGCTGCTTTAGTCATTGTGTGTCGAGTACTCCAGGGAATAGCCCAGGGAACAGTGTCAACAGGCCAGCATGAAATATGGGTCAAATGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CAA 90 bp | CATGCTACCTGTCTCCAGGTGTTCACGACTCTCCCAGGACTGCAGTCCCATGAAAAGCTAAGTGTTGAGTaGGCAAGTGTCAGGAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: HATCLQVFTTLPGLQSHEKLSVE*ASVRKM Trigger: CATTTTCCTGACACTTGCCAACTCAACACTTAGCTT...TTCATGGGACTGCAGTCCTGGGAGAGTCGTGAACACCTGGAGACAGGTAGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CAA 90 bp | GAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGCCTCATGCTACCAAGCTAAGTGTTGAGTaGGCAAGTGTCAGGAAAATG | + |
|
Preference number: 5 (lower is better) Translates to: ESLRQKWVRLSVQEPHATKLSVE*ASVRKM Trigger: CATTTTCCTGACACTTGCCAACTCAACACTTAGCTT...GGTAGCATGAGGCTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CAA 90 bp | AATACACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCATTTCATGCTGGCCTGTaGACACTGTTCCCTGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: NTQCKRITQTEVGATERSFHAGL*TLFPGL Trigger: TAGCCCAGGGAACAGTGTCAACAGGCCAGCATGAAA...TGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CAA 90 bp | TCACGACTCTCCCAGGACTGCAGTCCCATGAAGGATCCTCTTTCTTTCTATAAGAAGGGAGGTGCCCATTaGACCCATATTTCATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRLSQDCSPMKDPLSFYKKGGAH*THISCW Trigger: CCAGCATGAAATATGGGTCAAATGGGCACCTCCCTT...CTTATAGAAAGAAAGAGGATCCTTCATGGGACTGCAGTCCTGGGAGAGTCGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CAA 90 bp | CACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGATATACGGGTGGTCCTaGGGGTCATCAAAGAATAGA | + |
|
Preference number: 5 (lower is better) Translates to: HSAKESLRQKWVRLSVQEIYGWS*GSSKNR Trigger: TCTATTCTTTGATGACCCCAAGGACCACCCGTATAT...CTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CAA 90 bp | CACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAGGAGGATTTAAGCATAGCTTaGATTGGCAGGGATTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HSAKESLRQKWVRLSVQEDLSIA*IGRDCL Trigger: CAGACAATCCCTGCCAATCAAAGCTATGCTTAAATC...CTCCTGAACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CAA 90 bp | TACAATACACAGTGCAAAAGAATCACTCAGACAGAAGTGGGTGCGACTGAGCGTTCAACCCAGCAAGAGTaGAAGAAATCAGGCCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: YNTQCKRITQTEVGATERSTQQE*KKSGPQ Trigger: TTGGGGGCCTGATTTCTTCAACTCTTGCTGGGTTGA...ACGCTCAGTCGCACCCACTTCTGTCTGAGTGATTCTTTTGCACTGTGTATTGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS CCA 90 bp | TTCTTTACATTGTCCAACATCTCCACTACAGATTCGTTAGATAAATaGGGTGACCCTGTGTTGTTCACCATGGCTACCATGGTGAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FFTLSNISTTDSLDK*GDPVLFTMATMVRF Trigger: GAACCTCACCATGGTAGCCATGGTGAACAACACAGGGTCACCCCATTTATCTAACGAATCTGTAGTGGAGATGTTGGACAATGTAAAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CAA 90 bp | AAGGATCCTCTTTCTTTCTATAAGGATGCTGACCTCAGGCTTCTCAGCTTCTCCATGAAAGCAAAGCTATaGAGGATAATGGCCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KDPLSFYKDADLRLLSFSMKAKL*RIMAQS Trigger: ACTCTGGGCCATTATCCTCAATAGCTTTGCTTTCAT...GGAGAAGCTGAGAAGCCTGAGGTCAGCATCCTTATAGAAAGAAAGAGGATCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CAA 90 bp | GGAAACAAAACACAGAGAGATGTCACTGAAGAGTCCAACACTTCAGAGACATTATCAACCCAGCAAGAGTaGAAGAAATCAGGCCCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GNKTQRDVTEESNTSETLSTQQE*KKSGPQ Trigger: TTGGGGGCCTGATTTCTTCAACTCTTGCTGGGTTGA...TAATGTCTCTGAAGTGTTGGACTCTTCAGTGACATCTCTCTGTGTTTTGTTTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS TCA 90 bp | ATCCAAGGCATTGATAAGTTGTCCGCAGTAGGAAAAGCTAAGTGTTaGGTTGGCAAGTGTCAGGAAAATGACGGTGCTGTAGAAGTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IQGIDKLSAVGKAKC*VGKCQENDGAVEVV Trigger: TACAACTTCTACAGCACCGTCATTTTCCTGACACTTGCCAACTCAACACTTAGCTTTTCCTACTGCGGACAACTTATCAATGCCTTGGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS-3UTR CAA 90 bp | GGAAACAAAACACAGAGAGATGTCACTGAAGAGTCCAACACTTCAGAGACATTAATGAAAGCAAAGCTATaGAGGATAATGGCCCAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GNKTQRDVTEESNTSETLMKAKL*RIMAQS Trigger: ACTCTGGGCCATTATCCTCAATAGCTTTGCTTTCAT...TAATGTCTCTGAAGTGTTGGACTCTTCAGTGACATCTCTCTGTGTTTTGTTTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS CCA 72 bp | TGCTGGCCTGTTGACACTGTTCCCTGGGCTATTCCCTaGAGTACTCGACACACAATGACTAAAGCAGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: CWPVDTVPWAIP*STRHTMTKAAP Trigger: CGGAGCTGCTTTAGTCATTGTGTGTCGAGTACTCCAGGGAATAGCCCAGGGAACAGTGTCAACAGGCCAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS CCA 72 bp | ACCATGGCTACCATGGTGAGGTTCAGGCACACTCTCTaGGCCATGATGGCAATGTTACAGAAGTGCAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TMATMVRFRHTL*AMMAMLQKCRR Trigger: CCTTCTGCACTTCTGTAACATTGCCATCATGGCCCAGAGAGTGTGCCTGAACCTCACCATGGTAGCCATGGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 ENSMUST00000130211.8 |
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| CDS GCA 72 bp | CACACTCTCTGGGCCATGATGGCAATGTTACAGAAGTaGAGAAGGATAGCCAGTCCATACCGGAAGGAACAG | + |
|
Preference number: 6 (lower is better) Translates to: HTLWAMMAMLQK*RRIASPYRKEQ Trigger: CTGTTCCTTCCGGTATGGACTGGCTATCCTTCTGCACTTCTGTAACATTGCCATCATGGCCCAGAGAGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 ENSMUST00000130211.8 |
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| CDS CAA 72 bp | ATAATGGCCCAGAGTGGAAGAGATTTAAGCATAGCTTaGATTGGCAGGGATTGTCTGCCTGAGCTGGCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: IMAQSGRDLSIA*IGRDCLPELAC Trigger: ACAGGCCAGCTCAGGCAGACAATCCCTGCCAATCAAAGCTATGCTTAAATCTCTTCCACTCTGGGCCATTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS TCA 72 bp | TTTAAGCATAGCTTTGATTGGCAGGGATTGTCTGCCTaGGCTGGCCTGTTGCATGAGGGAGGATATGATGTA | + |
|
Preference number: 6 (lower is better) Translates to: FKHSFDWQGLSA*AGLLHEGGYDV Trigger: TACATCATATCCTCCCTCATGCAACAGGCCAGCTCAGGCAGACAATCCCTGCCAATCAAAGCTATGCTTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS CCA 72 bp | AGTCCTTCTCACTGCTGCTCATATACGGGTGGTCCTTaGGGTCATCAAAGAATAGAAAGAACCAGGAAAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SPSHCCSYTGGP*GHQRIERTRKD Trigger: GTCTTTCCTGGTTCTTTCTATTCTTTGATGACCCCAAGGACCACCCGTATATGAGCAGCAGTGAGAAGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS CCA 72 bp | TTGTCCAACATCTCCACTACAGATTCGTTAGATAAATaGGGTGACCCTGTGTTGTTCACCATGGCTACCATG | + |
|
Preference number: 6 (lower is better) Translates to: LSNISTTDSLDK*GDPVLFTMATM Trigger: CATGGTAGCCATGGTGAACAACACAGGGTCACCCCATTTATCTAACGAATCTGTAGTGGAGATGTTGGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 ENSMUST00000130211.8 |
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| CDS CAA 90 bp | CTGAACCACGACCATACCAAAGAAGACAGAACTGAGAATAAGCCCTaGGATATCAGGACTCCAGGAATACACAGGGTTCTTTACATTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LNHDHTKEDRTENKP*DIRTPGIHRVLYIV Trigger: GACAATGTAAAGAACCCTGTGTATTCCTGGAGTCCTGATATCCAAGGGCTTATTCTCAGTTCTGTCTTCTTTGGTATGGTCGTGGTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS TCA 72 bp | AGGCTGGACAGCAGTCCATTCTCTCTAACATTAACATaGAGCACAGTGCTGATAAATGTCGGCGTGTATGTA | + |
|
Preference number: 6 (lower is better) Translates to: RLDSSPFSLTLT*STVLINVGVYV Trigger: TACATACACGCCGACATTTATCAGCACTGTGCTTCATGTTAATGTTAGAGAGAATGGACTGCTGTCCAGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS CAA 72 bp | GACCATACCAAAGAAGACAGAACTGAGAATAAGCCCTaGGATATCAGGACTCCAGGAATACACAGGGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: DHTKEDRTENKP*DIRTPGIHRVL Trigger: AAGAACCCTGTGTATTCCTGGAGTCCTGATATCCAAGGGCTTATTCTCAGTTCTGTCTTCTTTGGTATGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS CAA 72 bp | ACCAGGAGACTGTTCGACCATATGAAAGCAAAGCTATaGAGGATAATGGCCCAGAGTGGAAGAGATTTAAGC | + |
|
Preference number: 6 (lower is better) Translates to: TRRLFDHMKAKL*RIMAQSGRDLS Trigger: GCTTAAATCTCTTCCACTCTGGGCCATTATCCTCAATAGCTTTGCTTTCATATGGTCGAACAGTCTCCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS CAA 90 bp | GTGTATGTAACCAGGAGACTGTTCGACCATATGAAAGCAAAGCTATaGAGGATAATGGCCCAGAGTGGAAGAGATTTAAGCATAGCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: VYVTRRLFDHMKAKL*RIMAQSGRDLSIAL Trigger: CAAAGCTATGCTTAAATCTCTTCCACTCTGGGCCATTATCCTCAATAGCTTTGCTTTCATATGGTCGAACAGTCTCCTGGTTACATACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS CCA 72 bp | TATGAAAGCAAAGCTATTGAGGATAATGGCCCAGAGTaGAAGAGATTTAAGCATAGCTTTGATTGGCAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: YESKAIEDNGPE*KRFKHSFDWQG Trigger: TCCCTGCCAATCAAAGCTATGCTTAAATCTCTTCCACTCTGGGCCATTATCCTCAATAGCTTTGCTTTCATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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| CDS CAA 72 bp | ATATCAGGACTCCAGGAATACACAGGGTTCTTTACATaGTCCAACATCTCCACTACAGATTCGTTAGATAAA | + |
|
Preference number: 6 (lower is better) Translates to: ISGLQEYTGFFT*SNISTTDSLDK Trigger: TTTATCTAACGAATCTGTAGTGGAGATGTTGGACAATGTAAAGAACCCTGTGTATTCCTGGAGTCCTGATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006785.8 ENSMUST00000110413.8 |
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