Pregenerated sensors for SLC16A9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037762Ensembl transcript IDs: ENSMUST00000046807.7
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCGGAAACCGGCAAACCAACAGGTTATTTGGAGACATCAGCAGAGTaGTTGCCGATCAACACCAGCGAGCAAGGTCCTAGGAGCCGGCCA | + |
|
Preference number: 1 (lower is better) Translates to: AETGKPTGYLETSAE*LPINTSEQGPRSRP Trigger: TGGCCGGCTCCTAGGACCTTGCTCGCTGGTGTTGATCGGCAACCACTCTGCTGATGTCTCCAAATAACCTGTTGGTTTGCCGGTTTCCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR GCA 90 bp | AAACCGGCAAACCAACAGGTTATTTGGAGACATCAGCAGAGTGGTTaGCGATCAACACCAGCGAGCAAGGTCCTAGGAGCCGGCCATGCA | + |
|
Preference number: 1 (lower is better) Translates to: KPANQQVIWRHQQSG*RSTPASKVLGAGHA Trigger: TGCATGGCCGGCTCCTAGGACCTTGCTCGCTGGTGTTGATCGGCAACCACTCTGCTGATGTCTCCAAATAACCTGTTGGTTTGCCGGTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR GCA 90 bp | CATTTGGAAGACATGCAAGCAAGGCCTTGCAACCCGTTCTCGAGGTaGTCAAAGCAAATGGGCGCTTCCCATTGGCCAGATTTCGGAATG | + |
|
Preference number: 1 (lower is better) Translates to: HLEDMQARPCNPFSR*SKQMGASHWPDFGM Trigger: CATTCCGAAATCTGGCCAATGGGAAGCGCCCATTTGCTTTGAGCACCTCGAGAACGGGTTGCAAGGCCTTGCTTGCATGTCTTCCAAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CCA 90 bp | GGTGCTCAAAGCAAATGGGCGCTTCCCATTGGCCAGATTTCGGAATaGTTCAAAGGTCTATTTCCAAGGCGGAAACCGGCAAACCAACAG | + |
|
Preference number: 1 (lower is better) Translates to: GAQSKWALPIGQISE*FKGLFPRRKPANQQ Trigger: CTGTTGGTTTGCCGGTTTCCGCCTTGGAAATAGACCTTTGAACCATTCCGAAATCTGGCCAATGGGAAGCGCCCATTTGCTTTGAGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CCA 90 bp | TGCAACCCGTTCTCGAGGTGCTCAAAGCAAATGGGCGCTTCCCATTaGCCAGATTTCGGAATGGTTCAAAGGTCTATTTCCAAGGCGGAA | + |
|
Preference number: 1 (lower is better) Translates to: CNPFSRCSKQMGASH*PDFGMVQRSISKAE Trigger: TTCCGCCTTGGAAATAGACCTTTGAACCATTCCGAAATCTGGCCAATGGGAAGCGCCCATTTGCTTTGAGCACCTCGAGAACGGGTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR TCA 90 bp | AAACTGTGCGAGGCTAATTCTGAACTCATGAACAACGAACAACCATaGAACAGAACAGAACAGAACAGTCCCACTTCTCGAGGGGTGGGG | + |
|
Preference number: 1 (lower is better) Translates to: KLCEANSELMNNEQP*NRTEQNSPTSRGVG Trigger: CCCCACCCCTCGAGAAGTGGGACTGTTCTGTTCTGTTCTGTTTCATGGTTGTTCGTTGTTCATGAGTTCAGAATTAGCCTCGCACAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR GCA 90 bp | ATCTTTCTACTTGATGACACAGGACACAGTTGTACCTCTGGGAGGTaGTATCCGGGATGTGTAATAAAGTGCTTCAGGTGTCCCCAAAGG | + |
|
Preference number: 1 (lower is better) Translates to: IFLLDDTGHSCTSGR*YPGCVIKCFRCPQR Trigger: CCTTTGGGGACACCTGAAGCACTTTATTACACATCCCGGATAGCACCTCCCAGAGGTACAACTGTGTCCTGTGTCATCAAGTAGAAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CCA 90 bp | GACAGCTCAGCGATGTTGCAACCGCTTTCATTTCCGGAAATGAAATaGCTCATTGTCTTCTCTGGATTTGCAGGTCTGACATCGAGGAGA | + |
|
Preference number: 1 (lower is better) Translates to: DSSAMLQPLSFPEMK*LIVFSGFAGLTSRR Trigger: TCTCCTCGATGTCAGACCTGCAAATCCAGAGAAGACAATGAGCCATTTCATTTCCGGAAATGAAAGCGGTTGCAACATCGCTGAGCTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CCA 90 bp | ATATATATATATATTATATATATATATATTCCACCAATACACAGGTaGCTGTGGGGGACAGAAGAGGGTGCCGGATCCCCTGGAGCTGGA | + |
|
Preference number: 1 (lower is better) Translates to: IYIYIIYIYIPPIHR*LWGTEEGAGSPGAG Trigger: TCCAGCTCCAGGGGATCCGGCACCCTCTTCTGTCCCCCACAGCCACCTGTGTATTGGTGGAATATATATATATATAATATATATATATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR-3UTR GCA 90 bp | GGCTGTGGGGGACAGAAGAGGGTGCCGGATCCCCTGGAGCTGGAGTTAGGCTTTTGTCTTCTCTGGATTTaGAGGTCTGACATCGAGGAG | + |
|
Preference number: 2 (lower is better) Translates to: GCGGQKRVPDPLELELGFCLLWI*RSDIEE Trigger: CTCCTCGATGTCAGACCTGCAAATCCAGAGAAGACA...AAAGCCTAACTCCAGCTCCAGGGGATCCGGCACCCTCTTCTGTCCCCCACAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CAA 90 bp | GAAACCGGCAAACCAACAGGTTATTTGGAGACATCAGCAGAGTGGTaGCCGATCAACACCAGCGAGCAAGGTCCTAGGAGCCGGCCATGC | + |
|
Preference number: 2 (lower is better) Translates to: ETGKPTGYLETSAEW*PINTSEQGPRSRPC Trigger: GCATGGCCGGCTCCTAGGACCTTGCTCGCTGGTGTTGATCGGCAACCACTCTGCTGATGTCTCCAAATAACCTGTTGGTTTGCCGGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CAA 90 bp | GAGAAACCACCACGGACTTCATTTGGAAGACATGCAAGCAAGGCCTaGCAACCCGTTCTCGAGGTGCTCAAAGCAAATGGGCGCTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: EKPPRTSFGRHASKA*QPVLEVLKANGRFP Trigger: TGGGAAGCGCCCATTTGCTTTGAGCACCTCGAGAACGGGTTGCAAGGCCTTGCTTGCATGTCTTCCAAATGAAGTCCGTGGTGGTTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CAA 90 bp | TTGCAACCCGTTCTCGAGGTGCTCAAAGCAAATGGGCGCTTCCCATaGGCCAGATTTCGGAATGGTTCAAAGGTCTATTTCCAAGGCGGA | + |
|
Preference number: 2 (lower is better) Translates to: LQPVLEVLKANGRFP*ARFRNGSKVYFQGG Trigger: TCCGCCTTGGAAATAGACCTTTGAACCATTCCGAAATCTGGCCAATGGGAAGCGCCCATTTGCTTTGAGCACCTCGAGAACGGGTTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR-3UTR CCA 90 bp | CAGCATAGTAGCACGCATTTAAGTTTCCACAGGGCATTTCCAGCCATACCAAACGGTGCTCAAAGCAAATaGGCGCTTCCCATTGGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: QHSSTHLSFHRAFPAIPNGAQSK*ALPIGQ Trigger: CTGGCCAATGGGAAGCGCCCATTTGCTTTGAGCACC...GTTTGGTATGGCTGGAAATGCCCTGTGGAAACTTAAATGCGTGCTACTATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR-3UTR CCA 90 bp | AAGGTACTCCTACTTAATCCCAGTACTTGGGATGCAGCCGCAGGTGGATCTGAGACCACGGACTTCATTTaGAAGACATGCAAGCAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: KVLLLNPSTWDAAAGGSETTDFI*KTCKQG Trigger: GCCTTGCTTGCATGTCTTCCAAATGAAGTCCGTGGT...CTCAGATCCACCTGCGGCTGCATCCCAAGTACTGGGATTAAGTAGGAGTACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR-3UTR TCA 90 bp | CTTGATGACACAGGACACAGTTGTACCTCTGGGAGGTGCTATCCGGGATGTGTATTTCATTTCCGGAAATaGAATGGCTCATTGTCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LDDTGHSCTSGRCYPGCVFHFRK*NGSLSS Trigger: AGAAGACAATGAGCCATTTCATTTCCGGAAATGAAA...TACACATCCCGGATAGCACCTCCCAGAGGTACAACTGTGTCCTGTGTCATCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR-3UTR GCA 90 bp | GGACCCACTGAGCACCTTAGAGAACTCACGGGGAAAGCAGAGACTTTAAATTTCATCCAGAGAAAACTGTaGGAGGCTAATTCTGAACTC | + |
|
Preference number: 2 (lower is better) Translates to: GPTEHLRELTGKAETLNFIQRKL*EANSEL Trigger: GAGTTCAGAATTAGCCTCGCACAGTTTTCTCTGGAT...GAAATTTAAAGTCTCTGCTTTCCCCGTGAGTTCTCTAAGGTGCTCAGTGGGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR-3UTR TCA 90 bp | AGGTGCTATCCGGGATGTGTAATAAAGTGCTTCAGGTGTCCCCAAAGGAAGGCAGACGTCAGACATCTGTaGTTTAAAACTATCTTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: RCYPGCVIKCFRCPQRKADVRHL*FKTILS Trigger: AGACAAGATAGTTTTAAATCACAGATGTCTGACGTC...TGCCTTCCTTTGGGGACACCTGAAGCACTTTATTACACATCCCGGATAGCACCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR-3UTR CCA 90 bp | GGTTGGGTGAGAGTAGCGAGTTCTCTTTACCTTGTCCTTTCCCACATCTTATGGTTTCCGGAAATGAAATaGCTCATTGTCTTCTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: GWVRVASSLYLVLSHILWFPEMK*LIVFSG Trigger: TCCAGAGAAGACAATGAGCCATTTCATTTCCGGAAA...CCATAAGATGTGGGAAAGGACAAGGTAAAGAGAACTCGCTACTCTCACCCAACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR-3UTR TCA 90 bp | CAGCATAGTAGCACGCATTTAAGTTTCCACAGGGCATTTCCAGCCATACCAAACAACAACGAACAACCATaGAACAGAACAGAACAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: QHSSTHLSFHRAFPAIPNNNEQP*NRTEQN Trigger: GTTCTGTTCTGTTCTGTTTCATGGTTGTTCGTTGTT...GTTTGGTATGGCTGGAAATGCCCTGTGGAAACTTAAATGCGTGCTACTATGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR-3UTR GCA 90 bp | AAGGAATCAAGGTTATACAAGGCACACAAAGACAGAGCGTGCGTTGTCCTTCAGCAGCCAGAGAAGTTTTaGTATAAGATTGTGACTCTA | + |
|
Preference number: 2 (lower is better) Translates to: KESRLYKAHKDRACVVLQQPEKF*YKIVTL Trigger: TAGAGTCACAATCTTATAGCAAAACTTCTCTGGCTG...CTGAAGGACAACGCACGCTCTGTCTTTGTGTGCCTTGTATAACCTTGATTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGTGGGGGACAGAAGAGGGTGCCGGATCCCCTGGAGCTGGAGTTAGGCTTTCTTGGAGCCCCATTATaGCATTGCCACAGGACTGAC | + |
|
Preference number: 3 (lower is better) Translates to: GCGGQKRVPDPLELELGFLGAPL*HCHRTD Trigger: GTCAGTCCTGTGGCAATGCAATAATGGGGCTCCAAG...AAAGCCTAACTCCAGCTCCAGGGGATCCGGCACCCTCTTCTGTCCCCCACAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR GCA 72 bp | GACATGCAAGCAAGGCCTTGCAACCCGTTCTCGAGGTaGTCAAAGCAAATGGGCGCTTCCCATTGGCCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: DMQARPCNPFSR*SKQMGASHWPD Trigger: ATCTGGCCAATGGGAAGCGCCCATTTGCTTTGAGCACCTCGAGAACGGGTTGCAAGGCCTTGCTTGCATGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR GCA 72 bp | AACCAACAGGTTATTTGGAGACATCAGCAGAGTGGTTaGCGATCAACACCAGCGAGCAAGGTCCTAGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: NQQVIWRHQQSG*RSTPASKVLGA Trigger: GGCTCCTAGGACCTTGCTCGCTGGTGTTGATCGGCAACCACTCTGCTGATGTCTCCAAATAACCTGTTGGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CCA 72 bp | GGCAAACCAACAGGTTATTTGGAGACATCAGCAGAGTaGTTGCCGATCAACACCAGCGAGCAAGGTCCTAGG | + |
|
Preference number: 3 (lower is better) Translates to: GKPTGYLETSAE*LPINTSEQGPR Trigger: CCTAGGACCTTGCTCGCTGGTGTTGATCGGCAACCACTCTGCTGATGTCTCCAAATAACCTGTTGGTTTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR TCA 72 bp | GGAGACAGCCATTACTCCTTCACGCAAATCCAATTGTaGGGAGCGCACAGTTTAAGACAGGACCCACTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: GDSHYSFTQIQL*GAHSLRQDPLS Trigger: GCTCAGTGGGTCCTGTCTTAAACTGTGCGCTCCTCACAATTGGATTTGCGTGAAGGAGTAATGGCTGTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CCA 72 bp | TTTCCAAGGCGGAAACCGGCAAACCAACAGGTTATTTaGAGACATCAGCAGAGTGGTTGCCGATCAACACCA | + |
|
Preference number: 3 (lower is better) Translates to: FPRRKPANQQVI*RHQQSGCRSTP Trigger: TGGTGTTGATCGGCAACCACTCTGCTGATGTCTCCAAATAACCTGTTGGTTTGCCGGTTTCCGCCTTGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CCA 72 bp | ATATATATATATATTCCACCAATACACAGGTGGCTGTaGGGGACAGAAGAGGGTGCCGGATCCCCTGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: IYIYIPPIHRWL*GTEEGAGSPGA Trigger: AGCTCCAGGGGATCCGGCACCCTCTTCTGTCCCCCACAGCCACCTGTGTATTGGTGGAATATATATATATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR GCA 72 bp | CTTGATGACACAGGACACAGTTGTACCTCTGGGAGGTaGTATCCGGGATGTGTAATAAAGTGCTTCAGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LDDTGHSCTSGR*YPGCVIKCFRC Trigger: ACACCTGAAGCACTTTATTACACATCCCGGATAGCACCTCCCAGAGGTACAACTGTGTCCTGTGTCATCAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CCA 72 bp | TTCTCGAGGTGCTCAAAGCAAATGGGCGCTTCCCATTaGCCAGATTTCGGAATGGTTCAAAGGTCTATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: FSRCSKQMGASH*PDFGMVQRSIS Trigger: GGAAATAGACCTTTGAACCATTCCGAAATCTGGCCAATGGGAAGCGCCCATTTGCTTTGAGCACCTCGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR GCA 72 bp | TCCGGAAATGAAATGGCTCATTGTCTTCTCTGGATTTaGAGGTCTGACATCGAGGAGACAGCCATTACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SGNEMAHCLLWI*RSDIEETAITP Trigger: AGGAGTAATGGCTGTCTCCTCGATGTCAGACCTGCAAATCCAGAGAAGACAATGAGCCATTTCATTTCCGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR GCA 72 bp | CACAAGTCTCATGTGCTTGGAGCCCCATTATTGCATTaGCACAGGACTGACTATGCGATGGAATCTTTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: HKSHVLGAPLLH*HRTDYAMESFY Trigger: GTAGAAAGATTCCATCGCATAGTCAGTCCTGTGGCAATGCAATAATGGGGCTCCAAGCACATGAGACTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CCA 72 bp | GCGATGTTGCAACCGCTTTCATTTCCGGAAATGAAATaGCTCATTGTCTTCTCTGGATTTGCAGGTCTGACA | + |
|
Preference number: 3 (lower is better) Translates to: AMLQPLSFPEMK*LIVFSGFAGLT Trigger: TGTCAGACCTGCAAATCCAGAGAAGACAATGAGCCATTTCATTTCCGGAAATGAAAGCGGTTGCAACATCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CCA 72 bp | TATATTATATATATATATATTCCACCAATACACAGGTaGCTGTGGGGGACAGAAGAGGGTGCCGGATCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: YIIYIYIPPIHR*LWGTEEGAGSP Trigger: AGGGGATCCGGCACCCTCTTCTGTCCCCCACAGCCACCTGTGTATTGGTGGAATATATATATATATAATATA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR TCA 72 bp | GAGGCTAATTCTGAACTCATGAACAACGAACAACCATaGAACAGAACAGAACAGAACAGTCCCACTTCTCGA | + |
|
Preference number: 3 (lower is better) Translates to: EANSELMNNEQP*NRTEQNSPTSR Trigger: TCGAGAAGTGGGACTGTTCTGTTCTGTTCTGTTTCATGGTTGTTCGTTGTTCATGAGTTCAGAATTAGCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR TCA 72 bp | TCCAGAGAAAACTGTGCGAGGCTAATTCTGAACTCATaGACAACGAACAACCATGAAACAGAACAGAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: SRENCARLILNS*TTNNHETEQNR Trigger: TCTGTTCTGTTCTGTTTCATGGTTGTTCGTTGTTCATGAGTTCAGAATTAGCCTCGCACAGTTTTCTCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR-3UTR CAA 90 bp | TTATTCAAGAAAAACAGTACTAGCCAGGAAAGGTACTCCTACTTAATCCCAGTAAAACCAACAGGTTATTaGGAGACATCAGCAGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: LFKKNSTSQERYSYLIPVKPTGY*ETSAEW Trigger: CCACTCTGCTGATGTCTCCAAATAACCTGTTGGTTT...TACTGGGATTAAGTAGGAGTACCTTTCCTGGCTAGTACTGTTTTTCTTGAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR GCA 72 bp | AAAGCAGAGACTTTAAATTTCATCCAGAGAAAACTGTaGGAGGCTAATTCTGAACTCATGAACAACGAACAA | + |
|
Preference number: 3 (lower is better) Translates to: KAETLNFIQRKL*EANSELMNNEQ Trigger: TTGTTCGTTGTTCATGAGTTCAGAATTAGCCTCGCACAGTTTTCTCTGGATGAAATTTAAAGTCTCTGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR CCA 90 bp | GGCTGTGGGGGACAGAAGAGGGTGCCGGATCCCCTGGAGCTGGAGTTAGGCTTTACAGAAAGTAGATATTaGGGGCAAGACTGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GCGGQKRVPDPLELELGFTESRY*GQDCSA Trigger: TGCTGAGCAGTCTTGCCCCCAATATCTACTTTCTGT...AAAGCCTAACTCCAGCTCCAGGGGATCCGGCACCCTCTTCTGTCCCCCACAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR TCA 90 bp | GAAACCGGCAAACCAACAGGTTATTTGGAGACATCAGCAGAGTGGTTGCCGATCCTAAAGCGCCCACGATaGGCAGGCAGCCATCTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ETGKPTGYLETSAEWLPILKRPR*AGSHLG Trigger: GCCTAGATGGCTGCCTGCTCATCGTGGGCGCTTTAG...GATCGGCAACCACTCTGCTGATGTCTCCAAATAACCTGTTGGTTTGCCGGTTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR GCA 90 bp | AGGTGCTATCCGGGATGTGTAATAAAGTGCTTCAGGTGTCCCCAAAGGAAGGCACTTGGCAAAGGGGATTaGGCACAAGGCCAGGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RCYPGCVIKCFRCPQRKALGKGD*AQGQAS Trigger: ACTGGCCTGGCCTTGTGCGCAATCCCCTTTGCCAAG...TGCCTTCCTTTGGGGACACCTGAAGCACTTTATTACACATCCCGGATAGCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR CCA 90 bp | CTCGAGGTGCTCAAAGCAAATGGGCGCTTCCCATTGGCCAGATTTCGGAATGGTCTCCATGAGCAGCGATaGTGGAAATCCTCCGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LEVLKANGRFPLARFRNGLHEQR*WKSSDV Trigger: GACATCGGAGGATTTCCACCATCGCTGCTCATGGAG...ACCATTCCGAAATCTGGCCAATGGGAAGCGCCCATTTGCTTTGAGCACCTCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR CCA 90 bp | AAAGGAAAGCAGCATAGTAGCACGCATTTAAGTTTCCACAGGGCATTTCCAGCCCCAACCAACTATGGGTaGCCCGAGGCTGTTCCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: KGKQHSSTHLSFHRAFPAPTNYG*PEAVPK Trigger: CTTGGGAACAGCCTCGGGCCACCCATAGTTGGTTGG...GGCTGGAAATGCCCTGTGGAAACTTAAATGCGTGCTACTATGCTGCTTTCCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CAA 72 bp | AAACCAACAGGTTATTTGGAGACATCAGCAGAGTGGTaGCCGATCAACACCAGCGAGCAAGGTCCTAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KPTGYLETSAEW*PINTSEQGPRS Trigger: GCTCCTAGGACCTTGCTCGCTGGTGTTGATCGGCAACCACTCTGCTGATGTCTCCAAATAACCTGTTGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CAA 72 bp | ATTTCCAAGGCGGAAACCGGCAAACCAACAGGTTATTaGGAGACATCAGCAGAGTGGTTGCCGATCAACACC | + |
|
Preference number: 4 (lower is better) Translates to: ISKAETGKPTGY*ETSAEWLPINT Trigger: GGTGTTGATCGGCAACCACTCTGCTGATGTCTCCAAATAACCTGTTGGTTTGCCGGTTTCCGCCTTGGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR TCA 90 bp | AGGTGCTATCCGGGATGTGTAATAAAGTGCTTCAGGTGTCCCCAAAGGAAGGCAAAGAGAGGAACTGGGTaGAGAAGGAGACAACCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RCYPGCVIKCFRCPQRKAKRGTG*RRRQPQ Trigger: TTGTGGTTGTCTCCTTCTTCACCCAGTTCCTCTCTT...TGCCTTCCTTTGGGGACACCTGAAGCACTTTATTACACATCCCGGATAGCACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR TCA 90 bp | GGTTGGGTGAGAGTAGCGAGTTCTCTTTACCTTGTCCTTTCCCACATCTTATGGCAAAATACTGGCATGTaGTGGTCACCGTCGCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GWVRVASSLYLVLSHILWQNTGM*WSPSLC Trigger: ACACAGCGACGGTGACCATCACATGCCAGTATTTTG...CCATAAGATGTGGGAAAGGACAAGGTAAAGAGAACTCGCTACTCTCACCCAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR CCA 90 bp | TCTCGAGGTGCTCAAAGCAAATGGGCGCTTCCCATTGGCCAGATTTCGGAATGGGTCTGGAACATTCTCTaGAGCTGTCTTTTCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRGAQSKWALPIGQISEWVWNIL*SCLFRK Trigger: TTTCCTGAAAAGACAGCTCCAGAGAATGTTCCAGAC...CCATTCCGAAATCTGGCCAATGGGAAGCGCCCATTTGCTTTGAGCACCTCGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CAA 72 bp | GTTCTCGAGGTGCTCAAAGCAAATGGGCGCTTCCCATaGGCCAGATTTCGGAATGGTTCAAAGGTCTATTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLEVLKANGRFP*ARFRNGSKVYF Trigger: GAAATAGACCTTTGAACCATTCCGAAATCTGGCCAATGGGAAGCGCCCATTTGCTTTGAGCACCTCGAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CAA 72 bp | TGCCACAGGACTGACTATGCGATGGAATCTTTCTACTaGATGACACAGGACACAGTTGTACCTCTGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CHRTDYAMESFY*MTQDTVVPLGG Trigger: ACCTCCCAGAGGTACAACTGTGTCCTGTGTCATCAAGTAGAAAGATTCCATCGCATAGTCAGTCCTGTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR CCA 90 bp | CAGCATAGTAGCACGCATTTAAGTTTCCACAGGGCATTTCCAGCCATACCAAACCGGCTGTCAAAATACTaGCATGTGATGGTCACCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QHSSTHLSFHRAFPAIPNRLSKY*HVMVTV Trigger: GACGGTGACCATCACATGCCAGTATTTTGACAGCCG...GTTTGGTATGGCTGGAAATGCCCTGTGGAAACTTAAATGCGTGCTACTATGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR CCA 90 bp | AGGTGCTATCCGGGATGTGTAATAAAGTGCTTCAGGTGTCCCCAAAGGAAGGCACATGGAGTATCTGTCTaGAACATTCTCTGGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RCYPGCVIKCFRCPQRKAHGVSV*NILWSC Trigger: ACAGCTCCAGAGAATGTTCCAGACAGATACTCCATG...TGCCTTCCTTTGGGGACACCTGAAGCACTTTATTACACATCCCGGATAGCACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR GCA 90 bp | CTTAGAGAACTCACGGGGAAAGCAGAGACTTTAAATTTCATCCAGAGAAAACTGATGAGACGAAGAGACTaGACACAGGACTTGCAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRELTGKAETLNFIQRKLMRRRD*TQDLQA Trigger: TGCTTGCAAGTCCTGTGTGCAGTCTCTTCGTCTCAT...CAGTTTTCTCTGGATGAAATTTAAAGTCTCTGCTTTCCCCGTGAGTTCTCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR CCA 90 bp | CAGCATAGTAGCACGCATTTAAGTTTCCACAGGGCATTTCCAGCCATACCAAACCTTTCTCGTTATACATaGAGTATCTGTCTGGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: QHSSTHLSFHRAFPAIPNLSRYT*SICLEH Trigger: ATGTTCCAGACAGATACTCCATGTATAACGAGAAAG...GTTTGGTATGGCTGGAAATGCCCTGTGGAAACTTAAATGCGTGCTACTATGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| 3UTR CAA 72 bp | GGCACAACAGAAAGGGAGCCCTTACTTAAAGAACCCTaGGCTGTTTGTTTTATAATACCTGACTTCATGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GTTEREPLLKEP*AVCFIIPDFMV Trigger: AACCATGAAGTCAGGTATTATAAAACAAACAGCCAAGGGTTCTTTAAGTAAGGGCTCCCTTTCTGTTGTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR CCA 90 bp | CTTAGAGAACTCACGGGGAAAGCAGAGACTTTAAATTTCATCCAGAGAAAACTGGTTCATAGTCTCCTCTaGGTTCTTCTCTTTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRELTGKAETLNFIQRKLVHSLL*VLLFLV Trigger: AACGAGAAAGAGAAGAACCCAGAGGAGACTATGAAC...CAGTTTTCTCTGGATGAAATTTAAAGTCTCTGCTTTCCCCGTGAGTTCTCTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS TCA 90 bp | TCAGGCCGAGGGCGAGGCCTCTGCGGCTGTCAAAATACTGGCATGTaGTGGTCACCGTCGCTGTGTATAATAAGCCACATCCGAGACCTA | + |
|
Preference number: 5 (lower is better) Translates to: SGRGRGLCGCQNTGM*WSPSLCIISHIRDL Trigger: TAGGTCTCGGATGTGGCTTATTATACACAGCGACGGTGACCATCACATGCCAGTATTTTGACAGCCGCAGAGGCCTCGCCCTCGGCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS CCA 90 bp | GTTGAAATCAGGCCGAGGGCGAGGCCTCTGCGGCTGTCAAAATACTaGCATGTGATGGTCACCGTCGCTGTGTATAATAAGCCACATCCG | + |
|
Preference number: 5 (lower is better) Translates to: VEIRPRARPLRLSKY*HVMVTVAVYNKPHP Trigger: CGGATGTGGCTTATTATACACAGCGACGGTGACCATCACATGCCAGTATTTTGACAGCCGCAGAGGCCTCGCCCTCGGCCTGATTTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR CAA 90 bp | GCGGAAACCGGCAAACCAACAGGTTATTTGGAGACATCAGCAGAGTGGTTGCCGAGGGTGTTGATCCACTaGAAGTCAGCCAGGATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AETGKPTGYLETSAEWLPRVLIH*KSARMP Trigger: GGGCATCCTGGCTGACTTCAAGTGGATCAACACCCT...CGGCAACCACTCTGCTGATGTCTCCAAATAACCTGTTGGTTTGCCGGTTTCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS TCA 90 bp | CACCAGGAAGCCACTGAAGATTGTGACGGGTCTTGCTCCAAAAGATaGGACGAAGAGACTGCACACAGGACTTGCAAGCAAGCCGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: HQEATEDCDGSCSKR*DEETAHRTCKQADS Trigger: GGAGTCGGCTTGCTTGCAAGTCCTGTGTGCAGTCTCTTCGTCTCATCTTTTGGAGCAAGACCCGTCACAATCTTCAGTGGCTTCCTGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS TCA 90 bp | CTAGGCCATAGAATTCAATCAGCATCCTCTGCAGAGCTGCGTAGATaGATAGACCCACACTCGAACCTGTTGAAATCAGGCCGAGGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LGHRIQSASSAELRR*IDPHSNLLKSGRGR Trigger: TCGCCCTCGGCCTGATTTCAACAGGTTCGAGTGTGGGTCTATTCATCTACGCAGCTCTGCAGAGGATGCTGATTGAATTCTATGGCCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS TCA 90 bp | TCAGGCTGCCACAGGCTAGGATGTTTAAAGCTAAAGCGCCCACGATaGGCAGGCAGCCATCTAGGCCATAGAATTCAATCAGCATCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SGCHRLGCLKLKRPR*AGSHLGHRIQSASS Trigger: AGAGGATGCTGATTGAATTCTATGGCCTAGATGGCTGCCTGCTCATCGTGGGCGCTTTAGCTTTAAACATCCTAGCCTGTGGCAGCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS GCA 90 bp | ACATTCTCTGGAGCTGTCTTTTCAGGAAAAGGACAGTCGGAGGTTTaGAAGGGCCTCATCAGGCTGCCACAGGCTAGGATGTTTAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: TFSGAVFSGKGQSEV*KGLIRLPQARMFKA Trigger: AGCTTTAAACATCCTAGCCTGTGGCAGCCTGATGAGGCCCTTGCAAACCTCCGACTGTCCTTTTCCTGAAAAGACAGCTCCAGAGAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR CAA 90 bp | CTCGAGGTGCTCAAAGCAAATGGGCGCTTCCCATTGGCCAGATTTCGGAATGGTCTCTTGGCAAGCTGCTaGCAAAAATTAGTCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEVLKANGRFPLARFRNGLLASC*QKLVCS Trigger: AGAACAGACTAATTTTTGCAAGCAGCTTGCCAAGAG...ACCATTCCGAAATCTGGCCAATGGGAAGCGCCCATTTGCTTTGAGCACCTCGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR CAA 90 bp | AAGGTACTCCTACTTAATCCCAGTACTTGGGATGCAGCCGCAGGTGGATCTGAGAGCGCGGAGAAGACTTaGTTTTTAAAAAGAGACGCG | + |
|
Preference number: 5 (lower is better) Translates to: KVLLLNPSTWDAAAGGSESAEKT*FLKRDA Trigger: CGCGTCTCTTTTTAAAAACAAAGTCTTCTCCGCGCT...CTCAGATCCACCTGCGGCTGCATCCCAAGTACTGGGATTAAGTAGGAGTACCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR CAA 90 bp | GGTTGGGTGAGAGTAGCGAGTTCTCTTTACCTTGTCCTTTCCCACATCTTATGGACTGTAGCCCTTGTCTaGGAAGTTCATAGTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GWVRVASSLYLVLSHILWTVALV*EVHSLL Trigger: GAGGAGACTATGAACTTCCAAGACAAGGGCTACAGT...CCATAAGATGTGGGAAAGGACAAGGTAAAGAGAACTCGCTACTCTCACCCAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS CCA 90 bp | CTTCTCTTTCTCGTTATACATGGAGTATCTGTCTGGAACATTCTCTaGAGCTGTCTTTTCAGGAAAAGGACAGTCGGAGGTTTGCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLFLVIHGVSVWNIL*SCLFRKRTVGGLQG Trigger: CCCTTGCAAACCTCCGACTGTCCTTTTCCTGAAAAGACAGCTCCAGAGAATGTTCCAGACAGATACTCCATGTATAACGAGAAAGAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS CCA 90 bp | ATCTTCGCTACTGTAGCCCTTGTCTTGGAAGTTCATAGTCTCCTCTaGGTTCTTCTCTTTCTCGTTATACATGGAGTATCTGTCTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: IFATVALVLEVHSLL*VLLFLVIHGVSVWN Trigger: GTTCCAGACAGATACTCCATGTATAACGAGAAAGAGAAGAACCCAGAGGAGACTATGAACTTCCAAGACAAGGGCTACAGTAGCGAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS-3UTR CAA 90 bp | AAGGAATCAAGGTTATACAAGGCACACAAAGACAGAGCGTGCGTTGTCCTTCAGGGCTTAGGTAGTTTTTaGTTGCACATATCCCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: KESRLYKAHKDRACVVLQGLGSF*LHISQQ Trigger: CTGTTGGGATATGTGCAACAAAAAACTACCTAAGCC...CTGAAGGACAACGCACGCTCTGTCTTTGTGTGCCTTGTATAACCTTGATTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS GCA 72 bp | GATAGCCAGCGTGACGTAACTCTTGGCAAAGGGGATTaGGCACAAGGCCAGGCCAGTGATGATCAGGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: DSQRDVTLGKGD*AQGQASDDQGS Trigger: GCTACCCTGATCATCACTGGCCTGGCCTTGTGCGCAATCCCCTTTGCCAAGAGTTACGTCACGCTGGCTATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS TCA 72 bp | CAACAGCTAACGGGGATCCGTAAGAGAGGAACTGGGTaGAGAAGGAGACAACCACAATCACCCAGCCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: QQLTGIRKRGTG*RRRQPQSPSPT Trigger: GGTGGGGCTGGGTGATTGTGGTTGTCTCCTTCTTCACCCAGTTCCTCTCTTACGGATCCCCGTTAGCTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS GCA 72 bp | GGAGCTGTCTTTTCAGGAAAAGGACAGTCGGAGGTTTaGAAGGGCCTCATCAGGCTGCCACAGGCTAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: GAVFSGKGQSEV*KGLIRLPQARM Trigger: CATCCTAGCCTGTGGCAGCCTGATGAGGCCCTTGCAAACCTCCGACTGTCCTTTTCCTGAAAAGACAGCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS CCA 72 bp | AGGCCGAGGGCGAGGCCTCTGCGGCTGTCAAAATACTaGCATGTGATGGTCACCGTCGCTGTGTATAATAAG | + |
|
Preference number: 6 (lower is better) Translates to: RPRARPLRLSKY*HVMVTVAVYNK Trigger: CTTATTATACACAGCGACGGTGACCATCACATGCCAGTATTTTGACAGCCGCAGAGGCCTCGCCCTCGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS TCA 72 bp | GGGCGAGGCCTCTGCGGCTGTCAAAATACTGGCATGTaGTGGTCACCGTCGCTGTGTATAATAAGCCACATC | + |
|
Preference number: 6 (lower is better) Translates to: GRGLCGCQNTGM*WSPSLCIISHI Trigger: GATGTGGCTTATTATACACAGCGACGGTGACCATCACATGCCAGTATTTTGACAGCCGCAGAGGCCTCGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS GCA 72 bp | AAGGACAGTCGGAGGTTTGCAAGGGCCTCATCAGGCTaGCACAGGCTAGGATGTTTAAAGCTAAAGCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: KDSRRFARASSG*HRLGCLKLKRP Trigger: TGGGCGCTTTAGCTTTAAACATCCTAGCCTGTGGCAGCCTGATGAGGCCCTTGCAAACCTCCGACTGTCCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS GCA 72 bp | GACCTTCTTTTTGTACGTCTCGGGCTCCTTGGTGTGTaGAGCGATGGCGAGGCTTTTAGGAAGGGAAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: DLLFVRLGLLGV*SDGEAFRKGSL Trigger: GAGACTTCCCTTCCTAAAAGCCTCGCCATCGCTGCACACACCAAGGAGCCCGAGACGTACAAAAAGAAGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS CAA 72 bp | TGTTCTACGACCTTCTTTTTGTACGTCTCGGGCTCCTaGGTGTGTGCAGCGATGGCGAGGCTTTTAGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: CSTTFFLYVSGS*VCAAMARLLGR Trigger: CCTTCCTAAAAGCCTCGCCATCGCTGCACACACCAAGGAGCCCGAGACGTACAAAAAGAAGGTCGTAGAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS CAA 90 bp | AGGGTGTTGATCCACTTGAAGTCAGCCAGGATGCCCAAAAGAAGCTaGCCCACGGCTGTCATGATGCCGAAAATGGAGATGAGAGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: RVLIHLKSARMPKRS*PTAVMMPKMEMRGM Trigger: CATGCCTCTCATCTCCATTTTCGGCATCATGACAGCCGTGGGCAAGCTTCTTTTGGGCATCCTGGCTGACTTCAAGTGGATCAACACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS TCA 72 bp | CTTCCCTCACGTGGTAACTTCTCGCGACATCCTCCATaGGCAGCGATGGTGGAAATCCTCCGATGTCAAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LPSRGNFSRHPP*AAMVEILRCQK Trigger: TTTTTGACATCGGAGGATTTCCACCATCGCTGCTCATGGAGGATGTCGCGAGAAGTTACCACGTGAGGGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS CCA 72 bp | GTGGTAACTTCTCGCGACATCCTCCATGAGCAGCGATaGTGGAAATCCTCCGATGTCAAAAAGCAAGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: VVTSRDILHEQR*WKSSDVKKQDG Trigger: GCCATCTTGCTTTTTGACATCGGAGGATTTCCACCATCGCTGCTCATGGAGGATGTCGCGAGAAGTTACCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS CAA 72 bp | ATCCACTTGAAGTCAGCCAGGATGCCCAAAAGAAGCTaGCCCACGGCTGTCATGATGCCGAAAATGGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: IHLKSARMPKRS*PTAVMMPKMEM Trigger: CATCTCCATTTTCGGCATCATGACAGCCGTGGGCAAGCTTCTTTTGGGCATCCTGGCTGACTTCAAGTGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS CAA 90 bp | AAATTAGTCTGTTCTACGACCTTCTTTTTGTACGTCTCGGGCTCCTaGGTGTGTGCAGCGATGGCGAGGCTTTTAGGAAGGGAAGTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: KLVCSTTFFLYVSGS*VCAAMARLLGREVS Trigger: GGAGACTTCCCTTCCTAAAAGCCTCGCCATCGCTGCACACACCAAGGAGCCCGAGACGTACAAAAAGAAGGTCGTAGAACAGACTAATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS CAA 90 bp | TTGGCAAGCTGCTTGCAAAAATTAGTCTGTTCTACGACCTTCTTTTaGTACGTCTCGGGCTCCTTGGTGTGTGCAGCGATGGCGAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: LASCLQKLVCSTTFF*YVSGSLVCAAMARL Trigger: AAGCCTCGCCATCGCTGCACACACCAAGGAGCCCGAGACGTACAAAAAGAAGGTCGTAGAACAGACTAATTTTTGCAAGCAGCTTGCCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS TCA 72 bp | GCCACTGAAGATTGTGACGGGTCTTGCTCCAAAAGATaGGACGAAGAGACTGCACACAGGACTTGCAAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: ATEDCDGSCSKR*DEETAHRTCKQ Trigger: TTGCTTGCAAGTCCTGTGTGCAGTCTCTTCGTCTCATCTTTTGGAGCAAGACCCGTCACAATCTTCAGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS CCA 72 bp | GTAACTTCTCGCGACATCCTCCATGAGCAGCGATGGTaGAAATCCTCCGATGTCAAAAAGCAAGATGGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: VTSRDILHEQRW*KSSDVKKQDGD Trigger: ATCGCCATCTTGCTTTTTGACATCGGAGGATTTCCACCATCGCTGCTCATGGAGGATGTCGCGAGAAGTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS TCA 72 bp | CACAGGCTAGGATGTTTAAAGCTAAAGCGCCCACGATaGGCAGGCAGCCATCTAGGCCATAGAATTCAATCA | + |
|
Preference number: 6 (lower is better) Translates to: HRLGCLKLKRPR*AGSHLGHRIQS Trigger: TGATTGAATTCTATGGCCTAGATGGCTGCCTGCTCATCGTGGGCGCTTTAGCTTTAAACATCCTAGCCTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS CAA 72 bp | AAAAAGGTGGTTGGCACTGCTGGCTTAGGTAGTTTTTaGTTGCACATATCCCAACAGGGCAAGATGGCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: KKVVGTAGLGSF*LHISQQGKMAS Trigger: GCTCGCCATCTTGCCCTGTTGGGATATGTGCAACAAAAAACTACCTAAGCCAGCAGTGCCAACCACCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS TCA 72 bp | AGAATTCAATCAGCATCCTCTGCAGAGCTGCGTAGATaGATAGACCCACACTCGAACCTGTTGAAATCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RIQSASSAELRR*IDPHSNLLKSG Trigger: GCCTGATTTCAACAGGTTCGAGTGTGGGTCTATTCATCTACGCAGCTCTGCAGAGGATGCTGATTGAATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS CCA 72 bp | CTCGTTATACATGGAGTATCTGTCTGGAACATTCTCTaGAGCTGTCTTTTCAGGAAAAGGACAGTCGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LVIHGVSVWNIL*SCLFRKRTVGG Trigger: ACCTCCGACTGTCCTTTTCCTGAAAAGACAGCTCCAGAGAATGTTCCAGACAGATACTCCATGTATAACGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS CCA 72 bp | ACTGTAGCCCTTGTCTTGGAAGTTCATAGTCTCCTCTaGGTTCTTCTCTTTCTCGTTATACATGGAGTATCT | + |
|
Preference number: 6 (lower is better) Translates to: TVALVLEVHSLL*VLLFLVIHGVS Trigger: AGATACTCCATGTATAACGAGAAAGAGAAGAACCCAGAGGAGACTATGAACTTCCAAGACAAGGGCTACAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||
| CDS CAA 72 bp | TTCCTATATAGCTGCCATTTCCTCTTGGCAAGCTGCTaGCAAAAATTAGTCTGTTCTACGACCTTCTTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: FLYSCHFLLASC*QKLVCSTTFFL Trigger: CAAAAAGAAGGTCGTAGAACAGACTAATTTTTGCAAGCAGCTTGCCAAGAGGAAATGGCAGCTATATAGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046807.7 |
||