Pregenerated sensors for SLC16A8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032988Ensembl transcript IDs: ENSMUST00000039752.4
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | TCTAACATATTGGGTTCCCAAGAGACCACCCCAGGCTaGCTCCCCATGTACCAGGCCCTCAGAGAGGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: SNILGSQETTPG*LPMYQALREEA Trigger: GGCTTCCTCTCTGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTTGGGAACCCAATATGTTAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| 3UTR CCA 72 bp | GGGCCCTTTATTCACTGTGAACAGGGTCTAACATATTaGGTTCCCAAGAGACCACCCCAGGCTGGCTCCCCA | + |
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Preference number: 3 (lower is better) Translates to: GPFIHCEQGLTY*VPKRPPQAGSP Trigger: TGGGGAGCCAGCCTGGGGTGGTCTCTTGGGAACCCAATATGTTAGACCCTGTTCACAGTGAATAAAGGGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR TCA 90 bp | GGGTTCCCAAGAGACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCTCAGAGACCAACAGGGCCAGGCTaGAGAGGTAGGGGACGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GFPRDHPRLAPHVPGPQRPTGPG*RGRGRG Trigger: CCCACGTCCCCTACCTCTTCAGCCTGGCCCTGTTGG...TCTCTGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTTGGGAACCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR GCA 90 bp | GACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCTCAGAGAGGAAGCCACAGTAGCGCGTCACGAGGATaGTGGACAAGGGGCCCGTGC | + |
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Preference number: 4 (lower is better) Translates to: DHPRLAPHVPGPQRGSHSSASRG*WTRGPC Trigger: GCACGGGCCCCTTGTCCAGCATCCTCGTGACGCGCT...ACTGTGGCTTCCTCTCTGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR GCA 90 bp | CCCAAGAGACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCTCAGAGAGGAAGGCAGTGCGCCCACCATaGCGTAGGACAGGCCGAAGG | + |
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Preference number: 4 (lower is better) Translates to: PKRPPQAGSPCTRPSERKAVRPP*RRTGRR Trigger: CCTTCGGCCTGTCCTACGGCATGGTGGGCGCACTGC...CTTCCTCTCTGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR TCA 90 bp | AAGAGACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCTCAGAGAGGAAGCCACAGAGGGCGGTCCTATaGGCACAGCCACGGCCTCCA | + |
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Preference number: 4 (lower is better) Translates to: KRPPQAGSPCTRPSERKPQRAVL*AQPRPP Trigger: TGGAGGCCGTGGCTGTGCTCATAGGACCGCCCTCTG...TGGCTTCCTCTCTGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR GCA 90 bp | ACATATTGGGTTCCCAAGAGACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCACGGTCGGTGCACACTaGCACGTCCAGCAGCCGCCG | + |
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Preference number: 4 (lower is better) Translates to: TYWVPKRPPQAGSPCTRPTVGAH*HVQQPP Trigger: CGGCGGCTGCTGGACGTGGCAGTGTGCACCGACCGT...GGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTTGGGAACCCAATATGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR GCA 90 bp | CCAAGAGACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCTCAGAGAGGAAGCTGCCCGGCTCCTCAGTaGTGGCAGGCATTGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: PRDHPRLAPHVPGPQRGSCPAPQ*WQALAQ Trigger: CTGAGCCAATGCCTGCCAGCACTGAGGAGCCGGGCA...GCTTCCTCTCTGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR TCA 90 bp | TGGGTTCCCAAGAGACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCTCAGAGCCACCTATGGACTCGTaGTCCAGCTCAGGCACTGCC | + |
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Preference number: 4 (lower is better) Translates to: WVPKRPPQAGSPCTRPSEPPMDS*SSSGTA Trigger: GGCAGTGCCTGAGCTGGATCACGAGTCCATAGGTGG...CTCTGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTTGGGAACCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR TCA 90 bp | CCAAGAGACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCTCAGAGAGGAAGCCAGAATCATGCCTGCTaGAGCCAGCAGTCCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: PRDHPRLAPHVPGPQRGSQNHAC*SQQSTS Trigger: GCTGGTGGACTGCTGGCTTCAGCAGGCATGATTCTG...GCTTCCTCTCTGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR CCA 90 bp | GACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCTCAGAGAGGAAGCCACAGTAGTTCACCAGCAGGATaGCCGGCACAAAGAGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: DHPRLAPHVPGPQRGSHSSSPAG*PAQRAR Trigger: TCGGGCTCTTTGTGCCGGCCATCCTGCTGGTGAACT...ACTGTGGCTTCCTCTCTGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR CCA 90 bp | TATTGGGTTCCCAAGAGACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCTCAGCACGCCCGCGTCCTTaGCGTAGTTCACCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: YWVPKRPPQAGSPCTRPSARPRP*RSSPAG Trigger: TCCTGCTGGTGAACTACGCCAAGGACGCGGGCGTGC...TGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTTGGGAACCCAATA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR CCA 90 bp | AGACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCTCAGAGAGGAAGCCACAGCACTGCCTCCTCCTCTaGTTCTTGTTCTGGGGACCC | + |
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Preference number: 4 (lower is better) Translates to: RPPQAGSPCTRPSERKPQHCLLL*FLFWGP Trigger: GGGTCCCCAGAACAAGAACCAGAGGAGGAGGCAGTG...CTGTGGCTTCCTCTCTGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR GCA 90 bp | CAGGGTCTAACATATTGGGTTCCCAAGAGACCACCCCAGGCTGGCTCCCCATGTACCGCACGCCGGTCGTaGCACGATGTCCACGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: QGLTYWVPKRPPQAGSPCTARRS*HDVHEA Trigger: GGCTTCGTGGACATCGTGGCACGACCGGCGTGCGGT...ACATGGGGAGCCAGCCTGGGGTGGTCTCTTGGGAACCCAATATGTTAGACCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR GCA 90 bp | TGGGTTCCCAAGAGACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCTCAGAGACAGGCCGAAGGCAATaGAGAAAGCAACGAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WVPKRPPQAGSPCTRPSETGRRQ*RKQRGS Trigger: GGACCCTCGTTGCTTTCTGCATTGCCTTCGGCCTGT...CTCTGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTTGGGAACCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR CCA 90 bp | CTAACATATTGGGTTCCCAAGAGACCACCCCAGGCTGGCTCCCCATGTACCAGGGCGTCACGAGGATGCTaGACAAGGGGCCCGTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: LTYWVPKRPPQAGSPCTRASRGC*TRGPCR Trigger: ACGGCACGGGCCCCTTGTCCAGCATCCTCGTGACGC...CCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTTGGGAACCCAATATGTTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR TCA 90 bp | CCCAAGAGACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCTCAGAGAGGAAGCCATCAGGAACTTGGTaGCCACGTACACCACGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PKRPPQAGSPCTRPSERKPSGTW*PRTPRK Trigger: CTTTCGTGGTGTACGTGGTCACCAAGTTCCTGATGG...CTTCCTCTCTGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR GCA 90 bp | GACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCTCAGAGAGGAAGCCACAGTCACAAAGAGCCCGAGTaGCATCAGGAACTTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: DHPRLAPHVPGPQRGSHSHKEPE*HQELGD Trigger: GTCACCAAGTTCCTGATGGCACTCGGGCTCTTTGTG...ACTGTGGCTTCCTCTCTGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR GCA 90 bp | AAGAGACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCTCAGAGAGGAAGCCATGCCATGAAGACTCCTaGCAAGGCCACTTCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: KRPPQAGSPCTRPSERKPCHEDS*QGHFRA Trigger: GGCTCTGAAGTGGCCTTGGCAGGAGTCTTCATGGCA...TGGCTTCCTCTCTGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR GCA 90 bp | AAGAGACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCTCAGAGAGGAAGCCAATCCAGCTCAGGCACTaGCTCCTCCTCTGGTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: KRPPQAGSPCTRPSERKPIQLRH*LLLWFL Trigger: CAAGAACCAGAGGAGGAGGCAGTGCCTGAGCTGGAT...TGGCTTCCTCTCTGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR CCA 90 bp | CAGGGTCTAACATATTGGGTTCCCAAGAGACCACCCCAGGCTGGCTCCCCATGTCGAGCGGCGACAGCATaGACAGAAACACGGGACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGLTYWVPKRPPQAGSPCRAATA*TETRDC Trigger: GCAGTCCCGTGTTTCTGTCCATGCTGTCGCCGCTCG...ACATGGGGAGCCAGCCTGGGGTGGTCTCTTGGGAACCCAATATGTTAGACCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR TCA 90 bp | GGGCCCTTTATTCACTGTGAACAGGGTCTAACATATTGGGTTCCCAAGAGACCACATAGGCGAAGCCGGTaGCCACGAAGCAGGCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPFIHCEQGLTYWVPKRPHRRSR*PRSRRP Trigger: TGGGCGCCTGCTTCGTGGTCACCGGCTTCGCCTATG...TGGTCTCTTGGGAACCCAATATGTTAGACCCTGTTCACAGTGAATAAAGGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS GCA 90 bp | GAACTTGGTGACCACGTACACCACGAAAGCACGGTCGGTGCACACTaGCACGTCCAGCAGCCGCCGGCGGCGAGCCGGGCCACCGTGGGG | + |
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Preference number: 5 (lower is better) Translates to: ELGDHVHHESTVGAH*HVQQPPAASRATVG Trigger: CCCCACGGTGGCCCGGCTCGCCGCCGGCGGCTGCTGGACGTGGCAGTGTGCACCGACCGTGCTTTCGTGGTGTACGTGGTCACCAAGTTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS GCA 90 bp | GGGTCTCAGGCGCCCCAGACCCGCCAAAGCACCGCACGCCGGTCGTaGCACGATGTCCACGAAGCCCACGATGGACAGCAAGAAGGCGGC | + |
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Preference number: 5 (lower is better) Translates to: GSQAPQTRQSTARRS*HDVHEAHDGQQEGG Trigger: GCCGCCTTCTTGCTGTCCATCGTGGGCTTCGTGGACATCGTGGCACGACCGGCGTGCGGTGCTTTGGCGGGTCTGGGGCGCCTGAGACCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS GCA 90 bp | CTGGGGACCCAGCCCGGGGGCTCAGCACCTCCAGAGCTTCAAGGCTaGCCGGCTCCTCAGTGCTGGCAGGCATTGGCTCAGAGTCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LGTQPGGSAPPELQG*PAPQCWQALAQSPS Trigger: AGAGGGACTCTGAGCCAATGCCTGCCAGCACTGAGGAGCCGGGCAGCCTTGAAGCTCTGGAGGTGCTGAGCCCCCGGGCTGGGTCCCCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS TCA 90 bp | AGTTCTTCAGAGCATCCACCAGGCGGCCGGCAGAGGGCGGTCCTATaGGCACAGCCACGGCCTCCACGAGCAGCACTAGGCCCAATGCAC | + |
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Preference number: 5 (lower is better) Translates to: SSSEHPPGGRQRAVL*AQPRPPRAALGPMH Trigger: GTGCATTGGGCCTAGTGCTGCTCGTGGAGGCCGTGGCTGTGCTCATAGGACCGCCCTCTGCCGGCCGCCTGGTGGATGCTCTGAAGAACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS CCA 90 bp | CTCCAGAGCTTCAAGGCTGCCCGGCTCCTCAGTGCTGGCAGGCATTaGCTCAGAGTCCCTCTCAGCCTCCACATCCTCTGGGTCGCTGGC | + |
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Preference number: 5 (lower is better) Translates to: LQSFKAARLLSAGRH*LRVPLSLHILWVAG Trigger: GCCAGCGACCCAGAGGATGTGGAGGCTGAGAGGGACTCTGAGCCAATGCCTGCCAGCACTGAGGAGCCGGGCAGCCTTGAAGCTCTGGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS CCA 90 bp | GGCTCAGCACCTCCAGAGCTTCAAGGCTGCCCGGCTCCTCAGTGCTaGCAGGCATTGGCTCAGAGTCCCTCTCAGCCTCCACATCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: GSAPPELQGCPAPQC*QALAQSPSQPPHPL Trigger: CAGAGGATGTGGAGGCTGAGAGGGACTCTGAGCCAATGCCTGCCAGCACTGAGGAGCCGGGCAGCCTTGAAGCTCTGGAGGTGCTGAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR CAA 90 bp | CCCAAGAGACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCTCAGAGAGGAAGGCCCCAAAGTCGCGCTaGAGCTCTCGGAAGAAGACG | + |
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Preference number: 5 (lower is better) Translates to: PKRPPQAGSPCTRPSERKAPKSR*SSRKKT Trigger: CGTCTTCTTCCGAGAGCTCAAGCGCGACTTTGGGGC...CTTCCTCTCTGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR CAA 90 bp | CCAAGAGACCACCCCAGGCTGGCTCCCCATGTACCAGGCCCTCAGAGAGGAAGCCAGTGCTGGCAGGCATaGGCTCAGAGTCCCTCTCAG | + |
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Preference number: 5 (lower is better) Translates to: PRDHPRLAPHVPGPQRGSQCWQA*AQSPSQ Trigger: CTGAGAGGGACTCTGAGCCAATGCCTGCCAGCACTG...GCTTCCTCTCTGAGGGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS TCA 90 bp | CAGCTCCACGAGGCGCGAGGCAAAGGAAGCCAGAATCATGCCTGCTaGAGCCAGCAGTCCACCAGCCAGCATCACGGGGCGACAGCCAAA | + |
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Preference number: 5 (lower is better) Translates to: QLHEARGKGSQNHAC*SQQSTSQHHGATAK Trigger: TTTGGCTGTCGCCCCGTGATGCTGGCTGGTGGACTGCTGGCTTCAGCAGGCATGATTCTGGCTTCCTTTGCCTCGCGCCTCGTGGAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR CAA 90 bp | AACATATTGGGTTCCCAAGAGACCACCCCAGGCTGGCTCCCCATGTACCAGGCCAGGTCCGTGAGCCCATaGGCCAACAGGGCCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: NILGSQETTPGWLPMYQARSVSP*ANRARL Trigger: CAGCCTGGCCCTGTTGGCCAATGGGCTCACGGACCT...GGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTTGGGAACCCAATATGTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS TCA 90 bp | GCAGGATGGCCGGCACAAAGAGCCCGAGTGCCATCAGGAACTTGGTaGCCACGTACACCACGAAAGCACGGTCGGTGCACACTGCCACGT | + |
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Preference number: 5 (lower is better) Translates to: AGWPAQRARVPSGTW*PRTPRKHGRCTLPR Trigger: ACGTGGCAGTGTGCACCGACCGTGCTTTCGTGGTGTACGTGGTCACCAAGTTCCTGATGGCACTCGGGCTCTTTGTGCCGGCCATCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS-3UTR CAA 90 bp | AACATATTGGGTTCCCAAGAGACCACCCCAGGCTGGCTCCCCATGTACCAGGCCAGTGCCATCAGGAACTaGGTGACCACGTACACCACG | + |
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Preference number: 5 (lower is better) Translates to: NILGSQETTPGWLPMYQASAIRN*VTTYTT Trigger: CGTGGTGTACGTGGTCACCAAGTTCCTGATGGCACT...GGCCTGGTACATGGGGAGCCAGCCTGGGGTGGTCTCTTGGGAACCCAATATGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS GCA 90 bp | AGAGCAGCGCAGGCAGCAGTAGGTGGTAACTGCCATGAAGACTCCTaGCAAGGCCACTTCAGAGCCAGCAAGGTAGAAGATGATTTCATA | + |
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Preference number: 5 (lower is better) Translates to: RAAQAAVGGNCHEDS*QGHFRASKVEDDFI Trigger: TATGAAATCATCTTCTACCTTGCTGGCTCTGAAGTGGCCTTGGCAGGAGTCTTCATGGCAGTTACCACCTACTGCTGCCTGCGCTGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS GCA 72 bp | TCTGCGCGGCGGGGGTCCAGGGGGCGGACGCATGACTaGCCCACAGGCGCAACAGTGCAGCAGGAGGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: SARRGSRGRTHD*PTGATVQQEAA Trigger: GGCGGCCTCCTGCTGCACTGTTGCGCCTGTGGGGCAGTCATGCGTCCGCCCCCTGGACCCCCGCCGCGCAGA 75% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS GCA 72 bp | GACCACGTACACCACGAAAGCACGGTCGGTGCACACTaGCACGTCCAGCAGCCGCCGGCGGCGAGCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: DHVHHESTVGAH*HVQQPPAASRA Trigger: GGCCCGGCTCGCCGCCGGCGGCTGCTGGACGTGGCAGTGTGCACCGACCGTGCTTTCGTGGTGTACGTGGTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS TCA 72 bp | GAGCATCCACCAGGCGGCCGGCAGAGGGCGGTCCTATaGGCACAGCCACGGCCTCCACGAGCAGCACTAGGC | + |
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Preference number: 6 (lower is better) Translates to: EHPPGGRQRAVL*AQPRPPRAALG Trigger: GCCTAGTGCTGCTCGTGGAGGCCGTGGCTGTGCTCATAGGACCGCCCTCTGCCGGCCGCCTGGTGGATGCTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS GCA 72 bp | AAGCCGCCACGCCAGCCGAAGCGCTCCCCCAGCAGCTaGCCGAGCGGCGACAGCATGGACAGAAACACGGGA | + |
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Preference number: 6 (lower is better) Translates to: KPPRQPKRSPSS*PSGDSMDRNTG Trigger: TCCCGTGTTTCTGTCCATGCTGTCGCCGCTCGGGCAGCTGCTGGGGGAGCGCTTCGGCTGGCGTGGCGGCTT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS GCA 72 bp | CAGCCCGGGGGCTCAGCACCTCCAGAGCTTCAAGGCTaGCCGGCTCCTCAGTGCTGGCAGGCATTGGCTCAG | + |
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Preference number: 6 (lower is better) Translates to: QPGGSAPPELQG*PAPQCWQALAQ Trigger: CTGAGCCAATGCCTGCCAGCACTGAGGAGCCGGGCAGCCTTGAAGCTCTGGAGGTGCTGAGCCCCCGGGCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS GCA 72 bp | GCATCACGGGGCGACAGCCAAAGCGCGTCACGAGGATaGTGGACAAGGGGCCCGTGCCGTAGAGCATGGCCA | + |
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Preference number: 6 (lower is better) Translates to: ASRGDSQSASRG*WTRGPCRRAWP Trigger: TGGCCATGCTCTACGGCACGGGCCCCTTGTCCAGCATCCTCGTGACGCGCTTTGGCTGTCGCCCCGTGATGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS CCA 72 bp | TCACGGGGCGACAGCCAAAGCGCGTCACGAGGATGCTaGACAAGGGGCCCGTGCCGTAGAGCATGGCCAACA | + |
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Preference number: 6 (lower is better) Translates to: SRGDSQSASRGC*TRGPCRRAWPT Trigger: TGTTGGCCATGCTCTACGGCACGGGCCCCTTGTCCAGCATCCTCGTGACGCGCTTTGGCTGTCGCCCCGTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS CAA 90 bp | CCTCCAGAGCTTCAAGGCTGCCCGGCTCCTCAGTGCTGGCAGGCATaGGCTCAGAGTCCCTCTCAGCCTCCACATCCTCTGGGTCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PPELQGCPAPQCWQA*AQSPSQPPHPLGRW Trigger: CCAGCGACCCAGAGGATGTGGAGGCTGAGAGGGACTCTGAGCCAATGCCTGCCAGCACTGAGGAGCCGGGCAGCCTTGAAGCTCTGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS TCA 72 bp | GAGGCGCGAGGCAAAGGAAGCCAGAATCATGCCTGCTaGAGCCAGCAGTCCACCAGCCAGCATCACGGGGCG | + |
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Preference number: 6 (lower is better) Translates to: EARGKGSQNHAC*SQQSTSQHHGA Trigger: CGCCCCGTGATGCTGGCTGGTGGACTGCTGGCTTCAGCAGGCATGATTCTGGCTTCCTTTGCCTCGCGCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS CCA 72 bp | CCTCCAGAGCTTCAAGGCTGCCCGGCTCCTCAGTGCTaGCAGGCATTGGCTCAGAGTCCCTCTCAGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PPELQGCPAPQC*QALAQSPSQPP Trigger: TGGAGGCTGAGAGGGACTCTGAGCCAATGCCTGCCAGCACTGAGGAGCCGGGCAGCCTTGAAGCTCTGGAGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS CCA 72 bp | TTCAAGGCTGCCCGGCTCCTCAGTGCTGGCAGGCATTaGCTCAGAGTCCCTCTCAGCCTCCACATCCTCTGG | + |
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Preference number: 6 (lower is better) Translates to: FKAARLLSAGRH*LRVPLSLHILW Trigger: CCAGAGGATGTGGAGGCTGAGAGGGACTCTGAGCCAATGCCTGCCAGCACTGAGGAGCCGGGCAGCCTTGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS CAA 90 bp | ACCAGCAGGATGGCCGGCACAAAGAGCCCGAGTGCCATCAGGAACTaGGTGACCACGTACACCACGAAAGCACGGTCGGTGCACACTGCC | + |
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Preference number: 6 (lower is better) Translates to: TSRMAGTKSPSAIRN*VTTYTTKARSVHTA Trigger: GGCAGTGTGCACCGACCGTGCTTTCGTGGTGTACGTGGTCACCAAGTTCCTGATGGCACTCGGGCTCTTTGTGCCGGCCATCCTGCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS TCA 72 bp | CCGGCACAAAGAGCCCGAGTGCCATCAGGAACTTGGTaGCCACGTACACCACGAAAGCACGGTCGGTGCACA | + |
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Preference number: 6 (lower is better) Translates to: PAQRARVPSGTW*PRTPRKHGRCT Trigger: TGTGCACCGACCGTGCTTTCGTGGTGTACGTGGTCACCAAGTTCCTGATGGCACTCGGGCTCTTTGTGCCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS TCA 72 bp | TTCTGGCCTCGTGCCTCATGGCCACCTATGGACTCGTaGTCCAGCTCAGGCACTGCCTCCTCCTCTGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: FWPRASWPPMDS*SSSGTASSSGS Trigger: AGAACCAGAGGAGGAGGCAGTGCCTGAGCTGGATCACGAGTCCATAGGTGGCCATGAGGCACGAGGCCAGAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS CAA 72 bp | ATGGCCGGCACAAAGAGCCCGAGTGCCATCAGGAACTaGGTGACCACGTACACCACGAAAGCACGGTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: MAGTKSPSAIRN*VTTYTTKARSV Trigger: CACCGACCGTGCTTTCGTGGTGTACGTGGTCACCAAGTTCCTGATGGCACTCGGGCTCTTTGTGCCGGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS GCA 72 bp | CAGGCAGCAGTAGGTGGTAACTGCCATGAAGACTCCTaGCAAGGCCACTTCAGAGCCAGCAAGGTAGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: QAAVGGNCHEDS*QGHFRASKVED Trigger: ATCTTCTACCTTGCTGGCTCTGAAGTGGCCTTGGCAGGAGTCTTCATGGCAGTTACCACCTACTGCTGCCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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| CDS TCA 72 bp | CTGCCAAGGCCACTTCAGAGCCAGCAAGGTAGAAGATaGTTTCATAGTTCTTCAGAGCATCCACCAGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: LPRPLQSQQGRR*FHSSSEHPPGG Trigger: GCCGCCTGGTGGATGCTCTGAAGAACTATGAAATCATCTTCTACCTTGCTGGCTCTGAAGTGGCCTTGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039752.4 |
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