Pregenerated sensors for SLC16A6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041920Ensembl transcript IDs: ENSMUST00000032206.9, ENSMUST00000070152.12, ENSMUST00000070872.13, ENSMUST00000168740.3
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGGACAACTCACAGAAGTTGACCTACCGTGTGGGTCCTAGGAATTaGACTCAGATTGTCAGACTTGGTGGCAGGCAACTTCACCTACTG | + |
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Preference number: 1 (lower is better) Translates to: EDNSQKLTYRVGPRN*TQIVRLGGRQLHLL Trigger: CAGTAGGTGAAGTTGCCTGCCACCAAGTCTGACAATCTGAGTTCAATTCCTAGGACCCACACGGTAGGTCAACTTCTGTGAGTTGTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| 3UTR TCA 90 bp | ATTGAACTCAGATTGTCAGACTTGGTGGCAGGCAACTTCACCTACTaGGCCATCTCGCTGGCCCTTTCTTTTGATCGTTTTAATCATCCT | + |
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Preference number: 1 (lower is better) Translates to: IELRLSDLVAGNFTY*AISLALSFDRFNHP Trigger: AGGATGATTAAAACGATCAAAAGAAAGGGCCAGCGAGATGGCTCAGTAGGTGAAGTTGCCTGCCACCAAGTCTGACAATCTGAGTTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| 3UTR CCA 90 bp | ACATTGCCTTTAACAACACCTGAAGAATCGTTACAACTTGGGCTGTaGAAAACTTACATTATGAGACCAGAAAAGCTCTCTGAAGCATTT | + |
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Preference number: 1 (lower is better) Translates to: TLPLTTPEESLQLGL*KTYIMRPEKLSEAF Trigger: AAATGCTTCAGAGAGCTTTTCTGGTCTCATAATGTAAGTTTTCCACAGCCCAAGTTGTAACGATTCTTCAGGTGTTGTTAAAGGCAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| 3UTR-3UTR GCA 90 bp | CAGGCATCGGCCGCCCTGTCGGGGAGATGCCATCACACAGGCGAGGAAGCAGACAGGGGAAGAGACAGCTaGTGGCCCTGCTGTCAGACA | + |
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Preference number: 2 (lower is better) Translates to: QASAALSGRCHHTGEEADRGRDS*WPCCQT Trigger: TGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCT...GTCTGCTTCCTCGCCTGTGTGATGGCATCTCCCCGACAGGGCGGCCGATGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| 3UTR-3UTR CCA 90 bp | TCGGCCGCCCTGTCGGGGAGATGCCATCACACAGGCGAGGAAGCAGACCCCCTCGCTACGGAACAGGGCTaGATTCCTGTATGGAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: SAALSGRCHHTGEEADPLATEQG*IPVWKR Trigger: CCTTTTCCATACAGGAATCCAGCCCTGTTCCGTAGC...GAGGGGGTCTGCTTCCTCGCCTGTGTGATGGCATCTCCCCGACAGGGCGGCCGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| 3UTR-3UTR GCA 90 bp | GTCGTTTTGGAATGGCCAATTAATTTCTGTGACTTGGGCTGGATGTCACTTTATGACAGCTGCTGGCCCTaGTGTCAGACAGGCATTCCC | + |
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Preference number: 2 (lower is better) Translates to: VVLEWPINFCDLGWMSLYDSCWP*CQTGIP Trigger: GGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTC...ATAAAGTGACATCCAGCCCAAGTCACAGAAATTAATTGGCCATTCCAAAACGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| 3UTR-3UTR GCA 90 bp | TCCCTGTCTCATGCAGTATATAGATTGAACTTAAGAGTTGATCCCTCAGAAATCGACAGCTGCTGGCCCTaGTGTCAGACAGGCATTCCC | + |
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Preference number: 2 (lower is better) Translates to: SLSHAVYRLNLRVDPSEIDSCWP*CQTGIP Trigger: GGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTC...GATTTCTGAGGGATCAACTCTTAAGTTCAATCTATATACTGCATGAGACAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| 3UTR CAA 90 bp | GCGATTTGTCGTCTGTTATCCCCCTCCCCTTTAAATAGCACAACATaGCCTTTAACAACACCTGAAGAATCGTTACAACTTGGGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: AICRLLSPSPLNSTT*PLTTPEESLQLGLW Trigger: CCACAGCCCAAGTTGTAACGATTCTTCAGGTGTTGTTAAAGGCAATGTTGTGCTATTTAAAGGGGAGGGGGATAACAGACGACAAATCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| 3UTR-3UTR TCA 90 bp | GTCGTTTTGGAATGGCCAATTAATTTCTGTGACTTGGGCTGGATGTCACTTTATCCCTTCATGCAAGTTTaGAGGTGGGGGTCTAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: VVLEWPINFCDLGWMSLYPFMQV*RWGSSG Trigger: ACCACTAGACCCCCACCTTCAAACTTGCATGAAGGG...ATAAAGTGACATCCAGCCCAAGTCACAGAAATTAATTGGCCATTCCAAAACGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| 3UTR-3UTR TCA 90 bp | TTGGAATGGCCAATTAATTTCTGTGACTTGGGCTGGATGTCACTTTATAATATACCCTTCATGCAAGTTTaGAGGTGGGGGTCTAGTGGT | + |
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Preference number: 2 (lower is better) Translates to: LEWPINFCDLGWMSLYNIPFMQV*RWGSSG Trigger: ACCACTAGACCCCCACCTTCAAACTTGCATGAAGGG...TATATTATAAAGTGACATCCAGCCCAAGTCACAGAAATTAATTGGCCATTCCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| 3UTR-3UTR CCA 90 bp | ATGTCACTTTATAATATAGTAGTTTATCACAGGAACGGAGTGCTTGTAACAGCAGCTACGGAACAGGGCTaGATTCCTGTATGGAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: MSLYNIVVYHRNGVLVTAATEQG*IPVWKR Trigger: CCTTTTCCATACAGGAATCCAGCCCTGTTCCGTAGC...TGCTGTTACAAGCACTCCGTTCCTGTGATAAACTACTATATTATAAAGTGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| 3UTR-3UTR CCA 90 bp | GTCGTTTTGGAATGGCCAATTAATTTCTGTGACTTGGGCTGGATGTCACTTTATGGCTGGATTCCTGTATaGAAAAGGTTTGGTTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: VVLEWPINFCDLGWMSLYGWIPV*KRFGCF Trigger: AAAACAACCAAACCTTTTCCATACAGGAATCCAGCC...ATAAAGTGACATCCAGCCCAAGTCACAGAAATTAATTGGCCATTCCAAAACGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| 3UTR GCA 72 bp | GCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTTCATaGAAGTTTGAAGGTGGGGGTCTAGTGGTTAGCGCC | + |
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Preference number: 3 (lower is better) Translates to: AAGPAVRQAFPS*KFEGGGLVVSA Trigger: GGCGCTAACCACTAGACCCCCACCTTCAAACTTGCATGAAGGGAATGCCTGTCTGACAGCAGGGCCAGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| 3UTR TCA 72 bp | TCACAGAAGTTGACCTACCGTGTGGGTCCTAGGAATTaGACTCAGATTGTCAGACTTGGTGGCAGGCAACTT | + |
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Preference number: 3 (lower is better) Translates to: SQKLTYRVGPRN*TQIVRLGGRQL Trigger: AAGTTGCCTGCCACCAAGTCTGACAATCTGAGTTCAATTCCTAGGACCCACACGGTAGGTCAACTTCTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| 3UTR-3UTR CAA 90 bp | AACTCAGTGATGGTGACGGCTGCGTTTCTCCCATTTCAGATGAATGAAGAAAGGCCGCTTATCTTTGTATaGCTACGGAACAGGGCTGGA | + |
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Preference number: 3 (lower is better) Translates to: NSVMVTAAFLPFQMNEERPLIFV*LRNRAG Trigger: TCCAGCCCTGTTCCGTAGCAATACAAAGATAAGCGG...CCTTTCTTCATTCATCTGAAATGGGAGAAACGCAGCCGTCACCATCACTGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| 3UTR TCA 72 bp | GATGGTGACGGCTGCGTTTCTCCCATTTCAGATGAATaGAGAAAGGCTTCAACAACAGTTACAGATCGAATA | + |
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Preference number: 3 (lower is better) Translates to: DGDGCVSPISDE*RKASTTVTDRI Trigger: TATTCGATCTGTAACTGTTGTTGAAGCCTTTCTTCATTCATCTGAAATGGGAGAAACGCAGCCGTCACCATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| 3UTR CCA 72 bp | TTAACAACACCTGAAGAATCGTTACAACTTGGGCTGTaGAAAACTTACATTATGAGACCAGAAAAGCTCTCT | + |
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Preference number: 3 (lower is better) Translates to: LTTPEESLQLGL*KTYIMRPEKLS Trigger: AGAGAGCTTTTCTGGTCTCATAATGTAAGTTTTCCACAGCCCAAGTTGTAACGATTCTTCAGGTGTTGTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR GCA 90 bp | GGGACTGGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTGCGCCGCCGACCATGTaGTGGGAGCGCCGAGCGCCT | + |
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Preference number: 4 (lower is better) Translates to: GTGGEETAAGPAVRQAFPAPPTM*WERRAP Trigger: AGGCGCTCGGCGCTCCCAGCACATGGTCGGCGGCGC...AGGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCCAGTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR GCA 90 bp | AGGGACTGGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTCATTCTTGATCGGCTaGAGCCGGTCTCCGCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: RDWRGRDSCWPCCQTGIPSFLIG*SRSPPA Trigger: GGCCGGCGGAGACCGGCTGCAGCCGATCAAGAATGA...GGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCCAGTCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR GCA 90 bp | AGGGACTGGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCGATGTCCGAAGCGGTTaGTCAGGACTGTGGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: RDWRGRDSCWPCCQTGIPDVRSG*SGLWRG Trigger: CCCTCTCCACAGTCCTGAGCAACCGCTTCGGACATC...GGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCCAGTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR GCA 90 bp | CTGTCGGGGAGATGCCATCACACAGGCGAGGAAGCAGACCCCCTCACCCTCACAGCTTTCATCTGGCTGTaGTTGGGGGCAGTCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: LSGRCHHTGEEADPLTLTAFIWL*LGAVTR Trigger: CCTGGTGACTGCCCCCAAGCACAGCCAGATGAAAGC...TGTGAGGGTGAGGGGGTCTGCTTCCTCGCCTGTGTGATGGCATCTCCCCGACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR CCA 90 bp | GGGACTGGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTGCCAACATCGGGATGTaGGTCCCTCCTATGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: GTGGEETAAGPAVRQAFPANIGM*VPPMVP Trigger: TGGGACCATAGGAGGGACCCACATCCCGATGTTGGC...AGGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCCAGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR CCA 90 bp | AGGGACTGGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCGCCAACATCGGGATGTaGGTCCCTCCTATGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: RDWRGRDSCWPCCQTGIPANIGM*VPPMVP Trigger: TGGGACCATAGGAGGGACCCACATCCCGATGTTGGC...GGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCCAGTCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR TCA 90 bp | ACTGGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTTCAGAATGGGCTCCCTGTTaGGGACAAACCCAGCCCCGA | + |
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Preference number: 4 (lower is better) Translates to: TGGEETAAGPAVRQAFPSEWAPC*GQTQPR Trigger: TCGGGGCTGGGTTTGTCCTCAACAGGGAGCCCATTC...TGAAGGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR TCA 90 bp | CAGGCATCGGCCGCCCTGTCGGGGAGATGCCATCACACAGGCGAGGAAGCAGACTGTCTGGTTCTCACCTaGATGAGAATTCTGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: QASAALSGRCHHTGEEADCLVLT*MRILAQ Trigger: CTGTGCCAGAATTCTCATTCAGGTGAGAACCAGACA...GTCTGCTTCCTCGCCTGTGTGATGGCATCTCCCCGACAGGGCGGCCGATGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR CCA 90 bp | CAGGCATCGGCCGCCCTGTCGGGGAGATGCCATCACACAGGCGAGGAAGCAGACCTTGGGTATACACATTaGCTCTGGCACAAAGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: QASAALSGRCHHTGEEADLGYTH*LWHKAS Trigger: CGAAGCTTTGTGCCAGAGCCAATGTGTATACCCAAG...GTCTGCTTCCTCGCCTGTGTGATGGCATCTCCCCGACAGGGCGGCCGATGCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR GCA 90 bp | GGGACTGGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTAAAAGAAACAGCTACTaGCCAGCCCCATCCTCCATC | + |
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Preference number: 4 (lower is better) Translates to: GTGGEETAAGPAVRQAFPKRNSY*PAPSSI Trigger: GATGGAGGATGGGGCTGGGCAGTAGCTGTTTCTTTT...AGGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCCAGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR GCA 90 bp | GGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTTCATGCACCATGATGTTCAGCTaGAGAAGGCCCACGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: GGEETAAGPAVRQAFPSCTMMFS*RRPTKR Trigger: CCTCTTCGTGGGCCTTCTGCAGCTGAACATCATGGT...GCATGAAGGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR GCA 90 bp | CTGTCGGGGAGATGCCATCACACAGGCGAGGAAGCAGACCCCCTCACCCTCACATGGTCCCAACCATGCTaGCAAAGAACACGCTACACA | + |
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Preference number: 4 (lower is better) Translates to: LSGRCHHTGEEADPLTLTWSQPC*QRTRYT Trigger: TGTGTAGCGTGTTCTTTGGCAGCATGGTTGGGACCA...TGTGAGGGTGAGGGGGTCTGCTTCCTCGCCTGTGTGATGGCATCTCCCCGACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR GCA 90 bp | AGGGACTGGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTGGTCCCAACCATGCTaGCAAAGAACACGCTACACA | + |
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Preference number: 4 (lower is better) Translates to: RDWRGRDSCWPCCQTGIPWSQPC*QRTRYT Trigger: TGTGTAGCGTGTTCTTTGGCAGCATGGTTGGGACCA...GGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCCAGTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR TCA 90 bp | AGGGACTGGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTGTCTGGTTCTCACCTaGATGAGAATTCTGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: RDWRGRDSCWPCCQTGIPCLVLT*MRILAQ Trigger: CTGTGCCAGAATTCTCATTCAGGTGAGAACCAGACA...GGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCCAGTCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR CCA 90 bp | CAGGCATCGGCCGCCCTGTCGGGGAGATGCCATCACACAGGCGAGGAAGCAGACTATACACATTGGCTCTaGCACAAAGCTTCGAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: QASAALSGRCHHTGEEADYTHWL*HKASSS Trigger: AGAACTCGAAGCTTTGTGCCAGAGCCAATGTGTATA...GTCTGCTTCCTCGCCTGTGTGATGGCATCTCCCCGACAGGGCGGCCGATGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR CCA 90 bp | GGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTTCATGCCTTGGGTATACACATTaGCTCTGGCACAAAGCTTCG | + |
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Preference number: 4 (lower is better) Translates to: GGEETAAGPAVRQAFPSCLGYTH*LWHKAS Trigger: CGAAGCTTTGTGCCAGAGCCAATGTGTATACCCAAG...GCATGAAGGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR CCA 90 bp | GGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTTCATGCGATTGCCCCGGCCCTTaGATAATAATTGGTCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: GGEETAAGPAVRQAFPSCDCPGP*IIIGLS Trigger: GCTAAGACCAATTATTATCCAAGGGCCGGGGCAATC...GCATGAAGGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR CCA 90 bp | CAGGCATCGGCCGCCCTGTCGGGGAGATGCCATCACACAGGCGAGGAAGCAGACATGAGATCTTGCTATTaGATTCATCAAAGCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QASAALSGRCHHTGEEADMRSCY*IHQSCP Trigger: TGGACAGCTTTGATGAATCCAATAGCAAGATCTCAT...GTCTGCTTCCTCGCCTGTGTGATGGCATCTCCCCGACAGGGCGGCCGATGCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR CCA 90 bp | GGGACTGGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTCAGAATGGTCACAGTTaGGAGGAAACTAAAGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: GTGGEETAAGPAVRQAFPQNGHS*EETKAV Trigger: TACTGCTTTAGTTTCCTCCCAACTGTGACCATTCTG...AGGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCCAGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR CCA 90 bp | GTCGTTTTGGAATGGCCAATTAATTTCTGTGACTTGGGCTGGATGTCACTTTATCCGCCGACCATGTGCTaGGAGCGCCGAGCGCCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VVLEWPINFCDLGWMSLYPPTMC*ERRAPA Trigger: TGCAGGCGCTCGGCGCTCCCAGCACATGGTCGGCGG...ATAAAGTGACATCCAGCCCAAGTCACAGAAATTAATTGGCCATTCCAAAACGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR TCA 90 bp | GGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTTCATGCGAAGAAGACACCAAATaGCTTAATGATGCCATAGGT | + |
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Preference number: 4 (lower is better) Translates to: GGEETAAGPAVRQAFPSCEEDTK*LNDAIG Trigger: ACCTATGGCATCATTAAGTCATTTGGTGTCTTCTTC...GCATGAAGGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR GCA 90 bp | ACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTTCATGCAAGTTTGAAGGTCTATGGTCCCAACCATaGTGCCAAAGAACACGCTAC | + |
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Preference number: 4 (lower is better) Translates to: TAAGPAVRQAFPSCKFEGLWSQP*CQRTRY Trigger: GTAGCGTGTTCTTTGGCAGCATGGTTGGGACCATAG...ACCTTCAAACTTGCATGAAGGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR CCA 90 bp | ACTGGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTTCATATACACATTGGCTCTaGCACAAAGCTTCGAGTTCT | + |
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Preference number: 4 (lower is better) Translates to: TGGEETAAGPAVRQAFPSYTHWL*HKASSS Trigger: AGAACTCGAAGCTTTGTGCCAGAGCCAATGTGTATA...TGAAGGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR TCA 90 bp | GGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTTCATGCTGTCCATTAAGTCATTaGAGAAGACACCAAATGACT | + |
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Preference number: 4 (lower is better) Translates to: GGEETAAGPAVRQAFPSCCPLSH*RRHQMT Trigger: AGTCATTTGGTGTCTTCTTCAATGACTTAATGGACA...GCATGAAGGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR CCA 90 bp | GGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTTCATGCATGAGATCTTGCTATTaGATTCATCAAAGCTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: GGEETAAGPAVRQAFPSCMRSCY*IHQSCP Trigger: TGGACAGCTTTGATGAATCCAATAGCAAGATCTCAT...GCATGAAGGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR GCA 90 bp | ACTGGAGGGGAAGAGACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTTCATTATCCATGAGATCTTaGTATTGGATTCATCAAAGC | + |
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Preference number: 4 (lower is better) Translates to: TGGEETAAGPAVRQAFPSLSMRS*YWIHQS Trigger: GCTTTGATGAATCCAATAGCAAGATCTCATGGATAA...TGAAGGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGTCTCTTCCCCTCCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR CCA 90 bp | ACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTTCATGCAAGTTTGAAGGTCAGAATGGTCACAGTTaGGAGGAAACTAAAGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: TAAGPAVRQAFPSCKFEGQNGHS*EETKAV Trigger: TACTGCTTTAGTTTCCTCCCAACTGTGACCATTCTG...ACCTTCAAACTTGCATGAAGGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR GCA 90 bp | AACTCAGTGATGGTGACGGCTGCGTTTCTCCCATTTCAGATGAATGAAGAAAGGAGCTGTGATAGCTGGTaGGAAAGCAAACACCGCGAA | + |
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Preference number: 4 (lower is better) Translates to: NSVMVTAAFLPFQMNEERSCDSW*ESKHRE Trigger: TTCGCGGTGTTTGCTTTCGCACCAGCTATCACAGCT...CCTTTCTTCATTCATCTGAAATGGGAGAAACGCAGCCGTCACCATCACTGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR GCA 90 bp | GTCGTTTTGGAATGGCCAATTAATTTCTGTGACTTGGGCTGGATGTCACTTTATACCAGGGTCTGCTGTTaGTCAGCCCTGGTTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VVLEWPINFCDLGWMSLYTRVCC*SALVSC Trigger: GCAGGAAACCAGGGCTGAGCAACAGCAGACCCTGGT...ATAAAGTGACATCCAGCCCAAGTCACAGAAATTAATTGGCCATTCCAAAACGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR GCA 90 bp | GTCGTTTTGGAATGGCCAATTAATTTCTGTGACTTGGGCTGGATGTCACTTTATGCAGTCACCAGGGTCTaGTGTTGCTCAGCCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VVLEWPINFCDLGWMSLYAVTRV*CCSALV Trigger: AACCAGGGCTGAGCAACAGCAGACCCTGGTGACTGC...ATAAAGTGACATCCAGCCCAAGTCACAGAAATTAATTGGCCATTCCAAAACGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR GCA 90 bp | AACTCAGTGATGGTGACGGCTGCGTTTCTCCCATTTCAGATGAATGAAGAAAGGCTATGGTCCCAACCATaGTGCCAAAGAACACGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: NSVMVTAAFLPFQMNEERLWSQP*CQRTRY Trigger: GTAGCGTGTTCTTTGGCAGCATGGTTGGGACCATAG...CCTTTCTTCATTCATCTGAAATGGGAGAAACGCAGCCGTCACCATCACTGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR CCA 90 bp | AACTCAGTGATGGTGACGGCTGCGTTTCTCCCATTTCAGATGAATGAAGAAAGGCCTCCATCAGGCACTTaGGTATACACATTGGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NSVMVTAAFLPFQMNEERPPSGT*VYTLAL Trigger: CAGAGCCAATGTGTATACCCAAGTGCCTGATGGAGG...CCTTTCTTCATTCATCTGAAATGGGAGAAACGCAGCCGTCACCATCACTGAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR GCA 90 bp | ATCTTTGTATTGCTACGGAACAGGGCTGGATTCCTGTATGGAAAAGGTTTGGTTAAAAGAAACAGCTACTaGCCAGCCCCATCCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: IFVLLRNRAGFLYGKGLVKRNSY*PAPSSI Trigger: GATGGAGGATGGGGCTGGGCAGTAGCTGTTTCTTTT...AACCAAACCTTTTCCATACAGGAATCCAGCCCTGTTCCGTAGCAATACAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR GCA 90 bp | GTCGTTTTGGAATGGCCAATTAATTTCTGTGACTTGGGCTGGATGTCACTTTATACCATGATGTTCAGCTaGAGAAGGCCCACGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VVLEWPINFCDLGWMSLYTMMFS*RRPTKR Trigger: CCTCTTCGTGGGCCTTCTGCAGCTGAACATCATGGT...ATAAAGTGACATCCAGCCCAAGTCACAGAAATTAATTGGCCATTCCAAAACGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR GCA 90 bp | TCTCATGCAGTATATAGATTGAACTTAAGAGTTGATCCCTCAGAAATCAGTTACACCAGGGTCTGCTGTTaGTCAGCCCTGGTTTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SHAVYRLNLRVDPSEISYTRVCC*SALVSC Trigger: GCAGGAAACCAGGGCTGAGCAACAGCAGACCCTGGT...GTAACTGATTTCTGAGGGATCAACTCTTAAGTTCAATCTATATACTGCATGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR GCA 90 bp | ATGTCACTTTATAATATAGTAGTTTATCACAGGAACGGAGTGCTTGTAACAGCAGCAGTCACCAGGGTCTaGTGTTGCTCAGCCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MSLYNIVVYHRNGVLVTAAVTRV*CCSALV Trigger: AACCAGGGCTGAGCAACAGCAGACCCTGGTGACTGC...TGCTGTTACAAGCACTCCGTTCCTGTGATAAACTACTATATTATAAAGTGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR GCA 90 bp | TTGGAATGGCCAATTAATTTCTGTGACTTGGGCTGGATGTCACTTTATAATATAGCTTTCATCTGGCTGTaGTTGGGGGCAGTCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LEWPINFCDLGWMSLYNIAFIWL*LGAVTR Trigger: CCTGGTGACTGCCCCCAAGCACAGCCAGATGAAAGC...TATATTATAAAGTGACATCCAGCCCAAGTCACAGAAATTAATTGGCCATTCCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR TCA 90 bp | TTGGAATGGCCAATTAATTTCTGTGACTTGGGCTGGATGTCACTTTATAATATACTTTTGGGTCATTCTTaGTCGGCTGCAGCCGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEWPINFCDLGWMSLYNILLGHS*SAAAGL Trigger: GAGACCGGCTGCAGCCGATCAAGAATGACCCAAAAG...TATATTATAAAGTGACATCCAGCCCAAGTCACAGAAATTAATTGGCCATTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR CCA 90 bp | TCCCTGTCTCATGCAGTATATAGATTGAACTTAAGAGTTGATCCCTCAGAAATCGATTGCCCCGGCCCTTaGATAATAATTGGTCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSHAVYRLNLRVDPSEIDCPGP*IIIGLS Trigger: GCTAAGACCAATTATTATCCAAGGGCCGGGGCAATC...GATTTCTGAGGGATCAACTCTTAAGTTCAATCTATATACTGCATGAGACAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| 3UTR CAA 72 bp | CGTCTGTTATCCCCCTCCCCTTTAAATAGCACAACATaGCCTTTAACAACACCTGAAGAATCGTTACAACTT | + |
|
Preference number: 4 (lower is better) Translates to: RLLSPSPLNSTT*PLTTPEESLQL Trigger: AAGTTGTAACGATTCTTCAGGTGTTGTTAAAGGCAATGTTGTGCTATTTAAAGGGGAGGGGGATAACAGACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR TCA 90 bp | TCTCATGCAGTATATAGATTGAACTTAAGAGTTGATCCCTCAGAAATCAGTTACCCGAGATGCTCTGAATaGAGACATAGACTCCAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SHAVYRLNLRVDPSEISYPRCSE*RHRLQL Trigger: CAGCTGGAGTCTATGTCTTCATTCAGAGCATCTCGG...GTAACTGATTTCTGAGGGATCAACTCTTAAGTTCAATCTATATACTGCATGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR GCA 90 bp | AACTCAGTGATGGTGACGGCTGCGTTTCTCCCATTTCAGATGAATGAAGAAAGGTTATCCATGAGATCTTaGTATTGGATTCATCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NSVMVTAAFLPFQMNEERLSMRS*YWIHQS Trigger: GCTTTGATGAATCCAATAGCAAGATCTCATGGATAA...CCTTTCTTCATTCATCTGAAATGGGAGAAACGCAGCCGTCACCATCACTGAGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR GCA 90 bp | ATGTCACTTTATAATATAGTAGTTTATCACAGGAACGGAGTGCTTGTAACAGCAAGCTGTGATAGCTGGTaGGAAAGCAAACACCGCGAA | + |
|
Preference number: 4 (lower is better) Translates to: MSLYNIVVYHRNGVLVTASCDSW*ESKHRE Trigger: TTCGCGGTGTTTGCTTTCGCACCAGCTATCACAGCT...TGCTGTTACAAGCACTCCGTTCCTGTGATAAACTACTATATTATAAAGTGACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| 3UTR CAA 72 bp | TTGGCATACATTTCCCTGTCTCATGCAGTATATAGATaGAACTTAAGAGTTGATCCCTCAGAAATCAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: LAYISLSHAVYR*NLRVDPSEISY Trigger: GTAACTGATTTCTGAGGGATCAACTCTTAAGTTCAATCTATATACTGCATGAGACAGGGAAATGTATGCCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR TCA 90 bp | TCTCATGCAGTATATAGATTGAACTTAAGAGTTGATCCCTCAGAAATCAGTTACTGTCCATTAAGTCATTaGAGAAGACACCAAATGACT | + |
|
Preference number: 4 (lower is better) Translates to: SHAVYRLNLRVDPSEISYCPLSH*RRHQMT Trigger: AGTCATTTGGTGTCTTCTTCAATGACTTAATGGACA...GTAACTGATTTCTGAGGGATCAACTCTTAAGTTCAATCTATATACTGCATGAGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR CAA 90 bp | CTGTCGGGGAGATGCCATCACACAGGCGAGGAAGCAGACCCCCTCACCCTCACATTCATCTGGCTGTGCTaGGGGGCAGTCACCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LSGRCHHTGEEADPLTLTFIWLC*GAVTRV Trigger: GACCCTGGTGACTGCCCCCAAGCACAGCCAGATGAA...TGTGAGGGTGAGGGGGTCTGCTTCCTCGCCTGTGTGATGGCATCTCCCCGACAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS GCA 90 bp | GGAGAAGGAGGCGGTGATCATTCCCAAGCTGATGAGCAACCCGCCTaGCATCACCACCAGCCGATGTCCGAAGCGGTTGCTCAGGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: GEGGGDHSQADEQPA*HHHQPMSEAVAQDC Trigger: ACAGTCCTGAGCAACCGCTTCGGACATCGGCTGGTGGTGATGGCAGGCGGGTTGCTCATCAGCTTGGGAATGATCACCGCCTCCTTCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 ENSMUST00000168740.3 |
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| CDS GCA 90 bp | GCTTTCATCTGGCTGTGCTTGGGGGCAGTCACCAGGGTCTGCTGTTaGTCAGCCCTGGTTTCCTGCTCCATCTTCGCTTCGCTAGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: AFIWLCLGAVTRVCC*SALVSCSIFASLGT Trigger: TGTGCCTAGCGAAGCGAAGATGGAGCAGGAAACCAGGGCTGAGCAACAGCAGACCCTGGTGACTGCCCCCAAGCACAGCCAGATGAAAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS CCA 90 bp | CTGCGGGGCTCCAGAGTGACTGCTTTCGGTGATTGCCCCGGCCCTTaGATAATAATTGGTCTTAGCAAGGCGCCGCAGACCATGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRGSRVTAFGDCPGP*IIIGLSKAPQTMMF Trigger: GAACATCATGGTCTGCGGCGCCTTGCTAAGACCAATTATTATCCAAGGGCCGGGGCAATCACCGAAAGCAGTCACTCTGGAGCCCCGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR CAA 90 bp | ACAGCTGCTGGCCCTGCTGTCAGACAGGCATTCCCTTCATGCAAGTTTGAAGGTTTCATCTGGCTGTGCTaGGGGGCAGTCACCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TAAGPAVRQAFPSCKFEGFIWLC*GAVTRV Trigger: GACCCTGGTGACTGCCCCCAAGCACAGCCAGATGAA...ACCTTCAAACTTGCATGAAGGGAATGCCTGTCTGACAGCAGGGCCAGCAGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS TCA 90 bp | TGTAACGCCTTCCCACGCTGCCGGTCTGTCTGGTTCTCACCTGAATaGGAATTCTGGCACAGGCCCTTTTTACAGGGTCTTACCAGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: CNAFPRCRSVWFSPE*EFWHRPFLQGLTRA Trigger: CGCCCTGGTAAGACCCTGTAAAAAGGGCCTGTGCCAGAATTCTCATTCAGGTGAGAACCAGACAGACCGGCAGCGTGGGAAGGCGTTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS CCA 90 bp | ATCTTCTCGATCCCAACGACGTCATCCTCTGCCAACATCGGGATGTaGGTCCCTCCTATGGTCCCAACCATGCTGCCAAAGAACACGCTA | + |
|
Preference number: 5 (lower is better) Translates to: IFSIPTTSSSANIGM*VPPMVPTMLPKNTL Trigger: TAGCGTGTTCTTTGGCAGCATGGTTGGGACCATAGGAGGGACCCACATCCCGATGTTGGCAGAGGATGACGTCGTTGGGATCGAGAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS CCA 90 bp | CCCAGCCCCATCCTCCATCAGGCACTTGGGTATACACATTGGCTCTaGCACAAAGCTTCGAGTTCTTTTGGGTCATTCTTGATCGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PSPILHQALGYTHWL*HKASSSFGSFLIGC Trigger: GCAGCCGATCAAGAATGACCCAAAAGAACTCGAAGCTTTGTGCCAGAGCCAATGTGTATACCCAAGTGCCTGATGGAGGATGGGGCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS GCA 90 bp | GTAGAAGCGACCGCGGTGACTACCGAACGCCTTTTGTCAAAGTACTaGGACAGAATGGTCACAGTTGGGAGGAAACTAAAGCAGTACCCT | + |
|
Preference number: 5 (lower is better) Translates to: VEATAVTTERLLSKY*DRMVTVGRKLKQYP Trigger: AGGGTACTGCTTTAGTTTCCTCCCAACTGTGACCATTCTGTCGCAGTACTTTGACAAAAGGCGTTCGGTAGTCACCGCGGTCGCTTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032206.9 ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS CCA 90 bp | CTACTGCCCAGCCCCATCCTCCATCAGGCACTTGGGTATACACATTaGCTCTGGCACAAAGCTTCGAGTTCTTTTGGGTCATTCTTGATC | + |
|
Preference number: 5 (lower is better) Translates to: LLPSPILHQALGYTH*LWHKASSSFGSFLI Trigger: GATCAAGAATGACCCAAAAGAACTCGAAGCTTTGTGCCAGAGCCAATGTGTATACCCAAGTGCCTGATGGAGGATGGGGCTGGGCAGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000168740.3 |
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| CDS CCA 90 bp | CCCAGCCCCATCCTCCATCAGGCACTTGGGTATACACATTGGCTCTaGCACAAAGCTTCGAGTTCTTTTGGGTCATTCTTGATCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSPILHQALGYTHWL*HKASSSFGSFLISL Trigger: CAGAGAGATCAAGAATGACCCAAAAGAACTCGAAGCTTTGTGCCAGAGCCAATGTGTATACCCAAGTGCCTGATGGAGGATGGGGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168740.3 |
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| CDS-3UTR CAA 90 bp | ATCTTTGTATTGCTACGGAACAGGGCTGGATTCCTGTATGGAAAAGGTTTGGTTCACCAGGGTCTGCTGTaGCTCAGCCCTGGTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IFVLLRNRAGFLYGKGLVHQGLL*LSPGFL Trigger: CAGGAAACCAGGGCTGAGCAACAGCAGACCCTGGTG...AACCAAACCTTTTCCATACAGGAATCCAGCCCTGTTCCGTAGCAATACAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR CAA 90 bp | TCCCTGTCTCATGCAGTATATAGATTGAACTTAAGAGTTGATCCCTCAGAAATCCGATGTCCGAAGCGGTaGCTCAGGACTGTGGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSHAVYRLNLRVDPSEIRCPKR*LRTVER Trigger: CCTCTCCACAGTCCTGAGCAACCGCTTCGGACATCG...GATTTCTGAGGGATCAACTCTTAAGTTCAATCTATATACTGCATGAGACAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR CAA 90 bp | ATCTTTGTATTGCTACGGAACAGGGCTGGATTCCTGTATGGAAAAGGTTTGGTTCATGTGGTAGACCCTTaGGGAGAAGGAGGCGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: IFVLLRNRAGFLYGKGLVHVVDP*GEGGGD Trigger: ATCACCGCCTCCTTCTCCCAAAGGGTCTACCACATG...AACCAAACCTTTTCCATACAGGAATCCAGCCCTGTTCCGTAGCAATACAAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR CAA 90 bp | TCCCTGTCTCATGCAGTATATAGATTGAACTTAAGAGTTGATCCCTCAGAAATCCATGTGGTAGACCCTTaGGGAGAAGGAGGCGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLSHAVYRLNLRVDPSEIHVVDP*GEGGGD Trigger: ATCACCGCCTCCTTCTCCCAAAGGGTCTACCACATG...GATTTCTGAGGGATCAACTCTTAAGTTCAATCTATATACTGCATGAGACAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR CAA 90 bp | TTGGAATGGCCAATTAATTTCTGTGACTTGGGCTGGATGTCACTTTATAATATACACCAGGGTCTGCTGTaGCTCAGCCCTGGTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LEWPINFCDLGWMSLYNIHQGLL*LSPGFL Trigger: CAGGAAACCAGGGCTGAGCAACAGCAGACCCTGGTG...TATATTATAAAGTGACATCCAGCCCAAGTCACAGAAATTAATTGGCCATTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR CAA 90 bp | GTCGTTTTGGAATGGCCAATTAATTTCTGTGACTTGGGCTGGATGTCACTTTATTCCTCCATCAGGCACTaGGGTATACACATTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VVLEWPINFCDLGWMSLYSSIRH*GIHIGS Trigger: AGAGCCAATGTGTATACCCAAGTGCCTGATGGAGGA...ATAAAGTGACATCCAGCCCAAGTCACAGAAATTAATTGGCCATTCCAAAACGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR CAA 90 bp | TCCCTGTCTCATGCAGTATATAGATTGAACTTAAGAGTTGATCCCTCAGAAATCACTTGGGTATACACATaGGCTCTGGCACAAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SLSHAVYRLNLRVDPSEITWVYT*ALAQSF Trigger: GAAGCTTTGTGCCAGAGCCAATGTGTATACCCAAGT...GATTTCTGAGGGATCAACTCTTAAGTTCAATCTATATACTGCATGAGACAGGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS-3UTR CAA 90 bp | TTGGAATGGCCAATTAATTTCTGTGACTTGGGCTGGATGTCACTTTATAATATATCCTCCATCAGGCACTaGGGTATACACATTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEWPINFCDLGWMSLYNISSIRH*GIHIGS Trigger: AGAGCCAATGTGTATACCCAAGTGCCTGATGGAGGA...TATATTATAAAGTGACATCCAGCCCAAGTCACAGAAATTAATTGGCCATTCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS-3UTR CAA 90 bp | TTGGAATGGCCAATTAATTTCTGTGACTTGGGCTGGATGTCACTTTATAATATAACTTGGGTATACACATaGGCTCTGGCACAAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LEWPINFCDLGWMSLYNITWVYT*ALAQSF Trigger: GAAGCTTTGTGCCAGAGCCAATGTGTATACCCAAGT...TATATTATAAAGTGACATCCAGCCCAAGTCACAGAAATTAATTGGCCATTCCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS GCA 72 bp | GGCGGTGATCATTCCCAAGCTGATGAGCAACCCGCCTaGCATCACCACCAGCCGATGTCCGAAGCGGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GGDHSQADEQPA*HHHQPMSEAVA Trigger: AGCAACCGCTTCGGACATCGGCTGGTGGTGATGGCAGGCGGGTTGCTCATCAGCTTGGGAATGATCACCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 ENSMUST00000168740.3 |
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| CDS GCA 72 bp | CCTGCTGTATATCTTGCTCTGGTCAACCAGCAGACCTaGCAGGGGTGGTCCCGCAAGCCCCGAGATGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PAVYLALVNQQT*QGWSRKPRDAL Trigger: CAGAGCATCTCGGGGCTTGCGGGACCACCCCTGGCAGGTCTGCTGGTTGACCAGAGCAAGATATACAGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS CCA 72 bp | CAAACCCAGCCCCGATCCTTCCGAACACTTCCGCAATaGCCATCGTCGACAGCAAAAACGCAGCGCGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: QTQPRSFRTLPQ*PSSTAKTQRGQ Trigger: CTGACCGCGCTGCGTTTTTGCTGTCGACGATGGCCATTGCGGAAGTGTTCGGAAGGATCGGGGCTGGGTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS GCA 72 bp | TTCATCTGGCTGTGCTTGGGGGCAGTCACCAGGGTCTaGTGTTGCTCAGCCCTGGTTTCCTGCTCCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: FIWLCLGAVTRV*CCSALVSCSIF Trigger: GAAGATGGAGCAGGAAACCAGGGCTGAGCAACAGCAGACCCTGGTGACTGCCCCCAAGCACAGCCAGATGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS CCA 72 bp | ATCCCAACGACGTCATCCTCTGCCAACATCGGGATGTaGGTCCCTCCTATGGTCCCAACCATGCTGCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: IPTTSSSANIGM*VPPMVPTMLPK Trigger: CTTTGGCAGCATGGTTGGGACCATAGGAGGGACCCACATCCCGATGTTGGCAGAGGATGACGTCGTTGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
||
| CDS CCA 72 bp | ACAGCTACTGCCCAGCCCCATCCTCCATCAGGCACTTaGGTATACACATTGGCTCTGGCACAAAGCTTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: TATAQPHPPSGT*VYTLALAQSFE Trigger: CTCGAAGCTTTGTGCCAGAGCCAATGTGTATACCCAAGTGCCTGATGGAGGATGGGGCTGGGCAGTAGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032206.9 ENSMUST00000070152.12 ENSMUST00000070872.13 ENSMUST00000168740.3 |
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| CDS CCA 72 bp | TCCAGAGTGACTGCTTTCGGTGATTGCCCCGGCCCTTaGATAATAATTGGTCTTAGCAAGGCGCCGCAGACC | + |
|
Preference number: 6 (lower is better) Translates to: SRVTAFGDCPGP*IIIGLSKAPQT Trigger: GGTCTGCGGCGCCTTGCTAAGACCAATTATTATCCAAGGGCCGGGGCAATCACCGAAAGCAGTCACTCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS CCA 72 bp | TACACATTGGCTCTGGCACAAAGCTTCGAGTTCTTTTaGGTCATTCTTGATCGGCTGCAGCCGGTCTCCGCC | + |
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Preference number: 6 (lower is better) Translates to: YTLALAQSFEFF*VILDRLQPVSA Trigger: GGCGGAGACCGGCTGCAGCCGATCAAGAATGACCCAAAAGAACTCGAAGCTTTGTGCCAGAGCCAATGTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000070152.12 |
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| CDS CAA 72 bp | AACAGCTACTGCCCAGCCCCATCCTCCATCAGGCACTaGGGTATACACATTGGCTCTGGCACAAAGCTTCGA | + |
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Preference number: 6 (lower is better) Translates to: NSYCPAPSSIRH*GIHIGSGTKLR Trigger: TCGAAGCTTTGTGCCAGAGCCAATGTGTATACCCAAGTGCCTGATGGAGGATGGGGCTGGGCAGTAGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032206.9 ENSMUST00000070152.12 ENSMUST00000070872.13 ENSMUST00000168740.3 |
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| CDS CAA 72 bp | CAGCCCCATCCTCCATCAGGCACTTGGGTATACACATaGGCTCTGGCACAAAGCTTCGAGTTCTTTTGGGTC | + |
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Preference number: 6 (lower is better) Translates to: QPHPPSGTWVYT*ALAQSFEFFWV Trigger: GACCCAAAAGAACTCGAAGCTTTGTGCCAGAGCCAATGTGTATACCCAAGTGCCTGATGGAGGATGGGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032206.9 ENSMUST00000070152.12 ENSMUST00000070872.13 ENSMUST00000168740.3 |
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| CDS CAA 90 bp | AAGCACTCTCCCGTAGAAGCGACCGCGGTGACTACCGAACGCCTTTaGTCAAAGTACTGCGACAGAATGGTCACAGTTGGGAGGAAACTA | + |
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Preference number: 6 (lower is better) Translates to: KHSPVEATAVTTERL*SKYCDRMVTVGRKL Trigger: TAGTTTCCTCCCAACTGTGACCATTCTGTCGCAGTACTTTGACAAAAGGCGTTCGGTAGTCACCGCGGTCGCTTCTACGGGAGAGTGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032206.9 ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS CAA 90 bp | GCTACTGCCCAGCCCCATCCTCCATCAGGCACTTGGGTATACACATaGGCTCTGGCACAAAGCTTCGAGTTCTTTTGGGTCATTCTTGAT | + |
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Preference number: 6 (lower is better) Translates to: ATAQPHPPSGTWVYT*ALAQSFEFFWVILD Trigger: ATCAAGAATGACCCAAAAGAACTCGAAGCTTTGTGCCAGAGCCAATGTGTATACCCAAGTGCCTGATGGAGGATGGGGCTGGGCAGTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000168740.3 |
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| CDS CCA 72 bp | AGCCCCATCCTCCATCAGGCACTTGGGTATACACATTaGCTCTGGCACAAAGCTTCGAGTTCTTTTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: SPILHQALGYTH*LWHKASSSFGS Trigger: TGACCCAAAAGAACTCGAAGCTTTGTGCCAGAGCCAATGTGTATACCCAAGTGCCTGATGGAGGATGGGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000032206.9 ENSMUST00000070152.12 ENSMUST00000070872.13 ENSMUST00000168740.3 |
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| CDS GCA 72 bp | ACCGCGGTGACTACCGAACGCCTTTTGTCAAAGTACTaGGACAGAATGGTCACAGTTGGGAGGAAACTAAAG | + |
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Preference number: 6 (lower is better) Translates to: TAVTTERLLSKY*DRMVTVGRKLK Trigger: CTTTAGTTTCCTCCCAACTGTGACCATTCTGTCGCAGTACTTTGACAAAAGGCGTTCGGTAGTCACCGCGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032206.9 ENSMUST00000070152.12 ENSMUST00000070872.13 |
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| CDS CCA 72 bp | ATCCTCCATCAGGCACTTGGGTATACACATTGGCTCTaGCACAAAGCTTCGAGTTCTTTTGGGTCATTCTTG | + |
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Preference number: 6 (lower is better) Translates to: ILHQALGYTHWL*HKASSSFGSFL Trigger: CAAGAATGACCCAAAAGAACTCGAAGCTTTGTGCCAGAGCCAATGTGTATACCCAAGTGCCTGATGGAGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000070152.12 ENSMUST00000168740.3 |
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