Pregenerated sensors for SLC16A5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045775Ensembl transcript IDs: ENSMUST00000092445.12, ENSMUST00000106532.4, ENSMUST00000153466.2
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTAGGAGCAGCTGGGAGGAGCCAGTCCAAGGTAGCTAGCCATGACTaGTTCCTGCAAGACTCAGACCAATCTTCTTGGGACCCAAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: VGAAGRSQSKVASHD*FLQDSDQSSWDPRK Trigger: CTTCCTTGGGTCCCAAGAAGATTGGTCTGAGTCTTGCAGGAAGCAGTCATGGCTAGCTACCTTGGACTGGCTCCTCCCAGCTGCTCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR GCA 90 bp | GGAGCCTGGTGGAGCCTGAACCAACAAACAACCCCAAGAAGTTCCTaGCAGCCTGAGGGAATGGAGGAAATTTACTCAGGCCTGGTTTCC | + |
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Preference number: 1 (lower is better) Translates to: GAWWSLNQQTTPRSS*QPEGMEEIYSGLVS Trigger: GGAAACCAGGCCTGAGTAAATTTCCTCCATTCCCTCAGGCTGGCAGGAACTTCTTGGGGTTGTTTGTTGGTTCAGGCTCCACCAGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR GCA 90 bp | TCCTTGTCCATGTGGGTCCCAGGAATCAAACTCAAGTTGTCGGCATaGAGCCAGCACCTTTACCTACTCAGCCGTCTCCACCCAAGGTCT | + |
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Preference number: 1 (lower is better) Translates to: SLSMWVPGIKLKLSA*SQHLYLLSRLHPRS Trigger: AGACCTTGGGTGGAGACGGCTGAGTAGGTAAAGGTGCTGGCTGCATGCCGACAACTTGAGTTTGATTCCTGGGACCCACATGGACAAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR CCA 90 bp | AGTTTCTTTCCCTGCTCTCTGCAGAGGCGCCAGGACCAGTATTACTaGTCTTCATCTGTGCCTGCTATGGCTCCAGTTAGCATAAGACTC | + |
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Preference number: 1 (lower is better) Translates to: SFFPCSLQRRQDQYY*SSSVPAMAPVSIRL Trigger: GAGTCTTATGCTAACTGGAGCCATAGCAGGCACAGATGAAGACCAGTAATACTGGTCCTGGCGCCTCTGCAGAGAGCAGGGAAAGAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR GCA 90 bp | CAAGTAAAAGGGCTCCTTCCAGGACAGCAGAAAAGTTTCTTTCCCTaGTCTCTGCAGAGGCGCCAGGACCAGTATTACTGGTCTTCATCT | + |
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Preference number: 1 (lower is better) Translates to: QVKGLLPGQQKSFFP*SLQRRQDQYYWSSS Trigger: AGATGAAGACCAGTAATACTGGTCCTGGCGCCTCTGCAGAGAGCAGGGAAAGAAACTTTTCTGCTGTCCTGGAAGGAGCCCTTTTACTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR CCA 90 bp | GTAGCTAGCCATGACTGCTTCCTGCAAGACTCAGACCAATCTTCTTaGGACCCAAGGAAGAAAGCCAGGAAGGCCCACTTCTATTTCCTA | + |
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Preference number: 1 (lower is better) Translates to: VASHDCFLQDSDQSS*DPRKKARKAHFYFL Trigger: TAGGAAATAGAAGTGGGCCTTCCTGGCTTTCTTCCTTGGGTCCCAAGAAGATTGGTCTGAGTCTTGCAGGAAGCAGTCATGGCTAGCTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR CCA 90 bp | TTCCCCTACGTGGATACGTGGATAGAGTCTGGTAAAAGGAGATTCTaGCTCAGGCCCTGCTCAATGGCAGAAGACTCTTCAGACTGTACA | + |
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Preference number: 1 (lower is better) Translates to: FPYVDTWIESGKRRF*LRPCSMAEDSSDCT Trigger: TGTACAGTCTGAAGAGTCTTCTGCCATTGAGCAGGGCCTGAGCCAGAATCTCCTTTTACCAGACTCTATCCACGTATCCACGTAGGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR CCA 90 bp | CTTAGAGGAACCGATCGCCTCCTAAAGATGCTTATTCATGCCAGATaGACTTGTGGAGGAGGATGGCTGGCGTCAGTCATGAAAATAAAA | + |
|
Preference number: 1 (lower is better) Translates to: LRGTDRLLKMLIHAR*TCGGGWLASVMKIK Trigger: TTTTATTTTCATGACTGACGCCAGCCATCCTCCTCCACAAGTCCATCTGGCATGAATAAGCATCTTTAGGAGGCGATCGGTTCCTCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR CAA 90 bp | TGGGGCCTCTCCTTGTCCATGTGGGTCCCAGGAATCAAACTCAAGTaGTCGGCATGCAGCCAGCACCTTTACCTACTCAGCCGTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: WGLSLSMWVPGIKLK*SACSQHLYLLSRLH Trigger: GTGGAGACGGCTGAGTAGGTAAAGGTGCTGGCTGCATGCCGACAACTTGAGTTTGATTCCTGGGACCCACATGGACAAGGAGAGGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR-3UTR TCA 90 bp | CCCTTCCCTGGAGTACCCTGCTGCGACAAGCCTGGGCTGATGACAGCTAGCCTTTTTCTGCCTCAGGGTTaGTACCTCCAACACATTCCG | + |
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Preference number: 2 (lower is better) Translates to: PFPGVPCCDKPGLMTASLFLPQG*YLQHIP Trigger: CGGAATGTGTTGGAGGTATCAACCCTGAGGCAGAAA...AAGGCTAGCTGTCATCAGCCCAGGCTTGTCGCAGCAGGGTACTCCAGGGAAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR-3UTR GCA 90 bp | CCCTTCCCTGGAGTACCCTGCTGCGACAAGCCTGGGCTGATGACAGCTAGCCTTAAAAGTTTCTTTCCCTaGTCTCTGCAGAGGCGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: PFPGVPCCDKPGLMTASLKSFFP*SLQRRQ Trigger: CTGGCGCCTCTGCAGAGAGCAGGGAAAGAAACTTTT...AAGGCTAGCTGTCATCAGCCCAGGCTTGTCGCAGCAGGGTACTCCAGGGAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCCCTGGAGTACCCTGCTGCGACAAGCCTGGGCTGATGACAGCTAGCCTTGGTAAAAGGAGATTCTaGCTCAGGCCCTGCTCAATG | + |
|
Preference number: 2 (lower is better) Translates to: PFPGVPCCDKPGLMTASLGKRRF*LRPCSM Trigger: CATTGAGCAGGGCCTGAGCCAGAATCTCCTTTTACC...AAGGCTAGCTGTCATCAGCCCAGGCTTGTCGCAGCAGGGTACTCCAGGGAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR-3UTR TCA 90 bp | ACAGAACAACTTGTGGTAGTGGGGCCTCTCCTTGTCCATGTGGGTCCCAGGAATGAGCCTGGTGGAGCCTaGACCAACAAACAACCCCAA | + |
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Preference number: 2 (lower is better) Translates to: TEQLVVVGPLLVHVGPRNEPGGA*TNKQPQ Trigger: TTGGGGTTGTTTGTTGGTTCAGGCTCCACCAGGCTC...ATTCCTGGGACCCACATGGACAAGGAGAGGCCCCACTACCACAAGTTGTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR-3UTR GCA 90 bp | CCATGGGCTCAGGCTAGCAGCAGCTGCCGATTTAGCCAGTTTCTGCCTCAGGGTGCCATGACTGCTTCCTaGAAGACTCAGACCAATCTT | + |
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Preference number: 2 (lower is better) Translates to: PWAQASSSCRFSQFLPQGAMTAS*KTQTNL Trigger: AAGATTGGTCTGAGTCTTGCAGGAAGCAGTCATGGC...ACCCTGAGGCAGAAACTGGCTAAATCGGCAGCTGCTGCTAGCCTGAGCCCATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR-3UTR GCA 90 bp | GGAGCCTGGTGGAGCCTGAACCAACAAACAACCCCAAGAAGTTCCTGCCAGCCTTGGTTAGTCAAGGTCTaGCTTCCCCTACGTGGATAC | + |
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Preference number: 2 (lower is better) Translates to: GAWWSLNQQTTPRSSCQPWLVKV*LPLRGY Trigger: GTATCCACGTAGGGGAAGGCAGACCTTGACTAACCA...AGGCTGGCAGGAACTTCTTGGGGTTGTTTGTTGGTTCAGGCTCCACCAGGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR-3UTR TCA 90 bp | TTTCTTGCTGGAGCCTGGTGGAGCCTGAACCAACAAACAACCCCAAGAAGTTCCGAAGGCTTCCCCCACTaGCTTCAGAGCTCAGAGATA | + |
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Preference number: 2 (lower is better) Translates to: FLAGAWWSLNQQTTPRSSEGFPH*LQSSEI Trigger: TATCTCTGAGCTCTGAAGTCAGTGGGGGAAGCCTTC...GGAACTTCTTGGGGTTGTTTGTTGGTTCAGGCTCCACCAGGCTCCAGCAAGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTCCTGCAAGACTCAGACCAATCTTCTTGGGACCCAAGGAAGAAAGCCAGCTATTTCCTACTTCCTaGAAGGAAGGCTTCCCCCAC | + |
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Preference number: 2 (lower is better) Translates to: LLPARLRPIFLGPKEESQLFPTS*KEGFPH Trigger: GTGGGGGAAGCCTTCCTTCCAGGAAGTAGGAAATAG...CTGGCTTTCTTCCTTGGGTCCCAAGAAGATTGGTCTGAGTCTTGCAGGAAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR-3UTR TCA 90 bp | GCTTATTCATGCCAGATGGACTTGTGGAGGAGGATGGCTGGCGTCAGTCATGAAAAGTTCCTGCCAGCCTaGGGGAATGGAGGAAATTTA | + |
|
Preference number: 2 (lower is better) Translates to: AYSCQMDLWRRMAGVSHEKFLPA*GNGGNL Trigger: TAAATTTCCTCCATTCCCTCAGGCTGGCAGGAACTT...TTCATGACTGACGCCAGCCATCCTCCTCCACAAGTCCATCTGGCATGAATAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR-3UTR GCA 90 bp | GCTTATTCATGCCAGATGGACTTGTGGAGGAGGATGGCTGGCGTCAGTCATGAAACTGGTCTTCATCTGTaGCTGCTATGGCTCCAGTTA | + |
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Preference number: 2 (lower is better) Translates to: AYSCQMDLWRRMAGVSHETGLHL*LLWLQL Trigger: TAACTGGAGCCATAGCAGGCACAGATGAAGACCAGT...TTCATGACTGACGCCAGCCATCCTCCTCCACAAGTCCATCTGGCATGAATAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR-3UTR GCA 90 bp | AGAGGAACCGATCGCCTCCTAAAGATGCTTATTCATGCCAGATGGACTTGTGGATTCTGGCTCAGGCCCTaGTCAATGGCAGAAGACTCT | + |
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Preference number: 2 (lower is better) Translates to: RGTDRLLKMLIHARWTCGFWLRP*SMAEDS Trigger: AGAGTCTTCTGCCATTGAGCAGGGCCTGAGCCAGAA...TCCACAAGTCCATCTGGCATGAATAAGCATCTTTAGGAGGCGATCGGTTCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR-3UTR GCA 90 bp | ATCATTTTCCTGATAAGGTTTTCTTGCTGGAGCCTGGTGGAGCCTGAACCAACAGTAGCTAGCCATGACTaGTTCCTGCAAGACTCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: IIFLIRFSCWSLVEPEPTVASHD*FLQDSD Trigger: GTCTGAGTCTTGCAGGAAGCAGTCATGGCTAGCTAC...TGTTGGTTCAGGCTCCACCAGGCTCCAGCAAGAAAACCTTATCAGGAAAATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR-3UTR TCA 90 bp | TGCCAGATGGACTTGTGGAGGAGGATGGCTGGCGTCAGTCATGAAAATAAAATCAGACTGTACAACTTCTaGGACCCAAGTAAAAGGGCT | + |
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Preference number: 2 (lower is better) Translates to: CQMDLWRRMAGVSHENKIRLYNF*DPSKRA Trigger: AGCCCTTTTACTTGGGTCTCAGAAGTTGTACAGTCT...GATTTTATTTTCATGACTGACGCCAGCCATCCTCCTCCACAAGTCCATCTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR-3UTR CCA 90 bp | GTATATAATTCAGACCGTTTTCCCCTTCCCTGGAGTACCCTGCTGCGACAAGCCTCATGGTTGGTTGTTTaGGAAGAGAAGAAGAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: VYNSDRFPLPWSTLLRQASWLVV*EEKKSK Trigger: CTTACTCTTCTTCTCTTCCCAAACAACCAACCATGA...GGCTTGTCGCAGCAGGGTACTCCAGGGAAGGGGAAAACGGTCTGAATTATATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR CAA 90 bp | AGGAACCGATCGCCTCCTAAAGATGCTTATTCATGCCAGATGGACTaGTGGAGGAGGATGGCTGGCGTCAGTCATGAAAATAAAATCATT | + |
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Preference number: 2 (lower is better) Translates to: RNRSPPKDAYSCQMD*WRRMAGVSHENKII Trigger: AATGATTTTATTTTCATGACTGACGCCAGCCATCCTCCTCCACAAGTCCATCTGGCATGAATAAGCATCTTTAGGAGGCGATCGGTTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR CCA 72 bp | CACCAGAAGCGAGTAAGTGGACATAGCTCCAGGCCATaGGCTCAGGCTAGCAGCAGCTGCCGATTTAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: HQKRVSGHSSRP*AQASSSCRFSQ Trigger: CTGGCTAAATCGGCAGCTGCTGCTAGCCTGAGCCCATGGCCTGGAGCTATGTCCACTTACTCGCTTCTGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR CCA 72 bp | CCCTGCTCTCTGCAGAGGCGCCAGGACCAGTATTACTaGTCTTCATCTGTGCCTGCTATGGCTCCAGTTAGC | + |
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Preference number: 3 (lower is better) Translates to: PCSLQRRQDQYY*SSSVPAMAPVS Trigger: GCTAACTGGAGCCATAGCAGGCACAGATGAAGACCAGTAATACTGGTCCTGGCGCCTCTGCAGAGAGCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR GCA 72 bp | GCTGGGAGGAGCCAGTCCAAGGTAGCTAGCCATGACTaGTTCCTGCAAGACTCAGACCAATCTTCTTGGGAC | + |
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Preference number: 3 (lower is better) Translates to: AGRSQSKVASHD*FLQDSDQSSWD Trigger: GTCCCAAGAAGATTGGTCTGAGTCTTGCAGGAAGCAGTCATGGCTAGCTACCTTGGACTGGCTCCTCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR GCA 72 bp | CTAGCCTGTCTTCTTGGCTCCTGGTTAGTCAAGGTCTaGCTTCCCCTACGTGGATACGTGGATAGAGTCTGG | + |
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Preference number: 3 (lower is better) Translates to: LACLLGSWLVKV*LPLRGYVDRVW Trigger: CCAGACTCTATCCACGTATCCACGTAGGGGAAGGCAGACCTTGACTAACCAGGAGCCAAGAAGACAGGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR GCA 72 bp | CTCAGGCTAGCAGCAGCTGCCGATTTAGCCAGTTTCTaGCTCAGGGTTGATACCTCCAACACATTCCGGAGA | + |
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Preference number: 3 (lower is better) Translates to: LRLAAAADLASF*LRVDTSNTFRR Trigger: TCTCCGGAATGTGTTGGAGGTATCAACCCTGAGGCAGAAACTGGCTAAATCGGCAGCTGCTGCTAGCCTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR GCA 72 bp | ATAATTCAGACCGTTTTCCCCTTCCCTGGAGTACCCTaGTGCGACAAGCCTGGGCTGATGACAGCTAGCCTT | + |
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Preference number: 3 (lower is better) Translates to: IIQTVFPFPGVP*CDKPGLMTASL Trigger: AAGGCTAGCTGTCATCAGCCCAGGCTTGTCGCAGCAGGGTACTCCAGGGAAGGGGAAAACGGTCTGAATTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR GCA 72 bp | ATGTGGGTCCCAGGAATCAAACTCAAGTTGTCGGCATaGAGCCAGCACCTTTACCTACTCAGCCGTCTCCAC | + |
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Preference number: 3 (lower is better) Translates to: MWVPGIKLKLSA*SQHLYLLSRLH Trigger: GTGGAGACGGCTGAGTAGGTAAAGGTGCTGGCTGCATGCCGACAACTTGAGTTTGATTCCTGGGACCCACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR TCA 72 bp | AGCAGCTGCCGATTTAGCCAGTTTCTGCCTCAGGGTTaGTACCTCCAACACATTCCGGAGAAAGGGGAACCT | + |
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Preference number: 3 (lower is better) Translates to: SSCRFSQFLPQG*YLQHIPEKGEP Trigger: AGGTTCCCCTTTCTCCGGAATGTGTTGGAGGTATCAACCCTGAGGCAGAAACTGGCTAAATCGGCAGCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR TCA 72 bp | CCTGATAAGGTTTTCTTGCTGGAGCCTGGTGGAGCCTaGACCAACAAACAACCCCAAGAAGTTCCTGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: PDKVFLLEPGGA*TNKQPQEVPAS Trigger: GCTGGCAGGAACTTCTTGGGGTTGTTTGTTGGTTCAGGCTCCACCAGGCTCCAGCAAGAAAACCTTATCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR CCA 72 bp | CATGACTGCTTCCTGCAAGACTCAGACCAATCTTCTTaGGACCCAAGGAAGAAAGCCAGGAAGGCCCACTTC | + |
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Preference number: 3 (lower is better) Translates to: HDCFLQDSDQSS*DPRKKARKAHF Trigger: GAAGTGGGCCTTCCTGGCTTTCTTCCTTGGGTCCCAAGAAGATTGGTCTGAGTCTTGCAGGAAGCAGTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR CCA 72 bp | ACCGATCGCCTCCTAAAGATGCTTATTCATGCCAGATaGACTTGTGGAGGAGGATGGCTGGCGTCAGTCATG | + |
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Preference number: 3 (lower is better) Translates to: TDRLLKMLIHAR*TCGGGWLASVM Trigger: CATGACTGACGCCAGCCATCCTCCTCCACAAGTCCATCTGGCATGAATAAGCATCTTTAGGAGGCGATCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR GCA 72 bp | TGGAGCCTGAACCAACAAACAACCCCAAGAAGTTCCTaGCAGCCTGAGGGAATGGAGGAAATTTACTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: WSLNQQTTPRSS*QPEGMEEIYSG Trigger: GCCTGAGTAAATTTCCTCCATTCCCTCAGGCTGGCAGGAACTTCTTGGGGTTGTTTGTTGGTTCAGGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR-3UTR CAA 90 bp | CTCAGCCGTCTCCACCCAAGGTCTAGAGACAGTGAACATAAGCAACTCAGCAAACTCAGACCAATCTTCTaGGGACCCAAGGAAGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: LSRLHPRSRDSEHKQLSKLRPIF*GPKEES Trigger: GCTTTCTTCCTTGGGTCCCAAGAAGATTGGTCTGAG...TTTGCTGAGTTGCTTATGTTCACTGTCTCTAGACCTTGGGTGGAGACGGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR GCA 72 bp | AGGTCTAGAGACAGTGAACATAAGCAACTCAGCAAATaGACGGCTGCAGTACTTCCTTTGACCATGAGGGGG | + |
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Preference number: 3 (lower is better) Translates to: RSRDSEHKQLSK*TAAVLPLTMRG Trigger: CCCCCTCATGGTCAAAGGAAGTACTGCAGCCGTGCATTTGCTGAGTTGCTTATGTTCACTGTCTCTAGACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR CCA 72 bp | GTGGATACGTGGATAGAGTCTGGTAAAAGGAGATTCTaGCTCAGGCCCTGCTCAATGGCAGAAGACTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: VDTWIESGKRRF*LRPCSMAEDSS Trigger: TGAAGAGTCTTCTGCCATTGAGCAGGGCCTGAGCCAGAATCTCCTTTTACCAGACTCTATCCACGTATCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR CCA 72 bp | TGTTCCTTAAGTTACCTAGCCTGTCTTCTTGGCTCCTaGTTAGTCAAGGTCTGCCTTCCCCTACGTGGATAC | + |
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Preference number: 3 (lower is better) Translates to: CSLSYLACLLGS*LVKVCLPLRGY Trigger: GTATCCACGTAGGGGAAGGCAGACCTTGACTAACCAGGAGCCAAGAAGACAGGCTAGGTAACTTAAGGAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR-3UTR CAA 90 bp | TGCCAGATGGACTTGTGGAGGAGGATGGCTGGCGTCAGTCATGAAAATAAAATCGGGGGTCATGGTTGGTaGTTTGGGAAGAGAAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: CQMDLWRRMAGVSHENKIGGHGW*FGKRRR Trigger: TCTTCTTCTCTTCCCAAACAACCAACCATGACCCCC...GATTTTATTTTCATGACTGACGCCAGCCATCCTCCTCCACAAGTCCATCTGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR TCA 72 bp | CTCAATGGCAGAAGACTCTTCAGACTGTACAACTTCTaGGACCCAAGTAAAAGGGCTCCTTCCAGGACAGCA | + |
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Preference number: 3 (lower is better) Translates to: LNGRRLFRLYNF*DPSKRAPSRTA Trigger: TGCTGTCCTGGAAGGAGCCCTTTTACTTGGGTCTCAGAAGTTGTACAGTCTGAAGAGTCTTCTGCCATTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR TCA 72 bp | CAGGCCTGGTTTCCGCTTTTCTTAGTCCAGAGTTCATaGCCCGTGCGGCAGGGAATGTTTTTGTATATAATT | + |
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Preference number: 3 (lower is better) Translates to: QAWFPLFLVQSS*PVRQGMFLYII Trigger: AATTATATACAAAAACATTCCCTGCCGCACGGGTCATGAACTCTGGACTAAGAAAAGCGGAAACCAGGCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR CCA 72 bp | TTTATAATGTTCCTTAAGTTACCTAGCCTGTCTTCTTaGCTCCTGGTTAGTCAAGGTCTGCCTTCCCCTACG | + |
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Preference number: 3 (lower is better) Translates to: FIMFLKLPSLSS*LLVSQGLPSPT Trigger: CGTAGGGGAAGGCAGACCTTGACTAACCAGGAGCCAAGAAGACAGGCTAGGTAACTTAAGGAACATTATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| 3UTR CCA 72 bp | CCTCCTAAAGATGCTTATTCATGCCAGATGGACTTGTaGAGGAGGATGGCTGGCGTCAGTCATGAAAATAAA | + |
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Preference number: 3 (lower is better) Translates to: PPKDAYSCQMDL*RRMAGVSHENK Trigger: TTTATTTTCATGACTGACGCCAGCCATCCTCCTCCACAAGTCCATCTGGCATGAATAAGCATCTTTAGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| CDS-3UTR TCA 90 bp | GGAGCCTGGTGGAGCCTGAACCAACAAACAACCCCAAGAAGTTCCTGCCAGCCTTGGGGAAGCCCAGGGTaGGGGCCTGCGTCACCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GAWWSLNQQTTPRSSCQPWGSPG*GPASPG Trigger: CCCTGGTGACGCAGGCCCTCACCCTGGGCTTCCCCA...AGGCTGGCAGGAACTTCTTGGGGTTGTTTGTTGGTTCAGGCTCCACCAGGCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| CDS-3UTR TCA 90 bp | CCCTTCCCTGGAGTACCCTGCTGCGACAAGCCTGGGCTGATGACAGCTAGCCTTCGCGCTGCAGATCAGTaGAGAAGACACCGATGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PFPGVPCCDKPGLMTASLRAADQ*RRHRCR Trigger: CCTGCATCGGTGTCTTCTTCACTGATCTGCAGCGCG...AAGGCTAGCTGTCATCAGCCCAGGCTTGTCGCAGCAGGGTACTCCAGGGAAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| CDS-3UTR TCA 90 bp | ATTCAGACCGTTTTCCCCTTCCCTGGAGTACCCTGCTGCGACAAGCCTGGGCTGCATTGGGGTCATCTCTaGGGTAGCGTTCTCCATTTT | + |
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Preference number: 4 (lower is better) Translates to: IQTVFPFPGVPCCDKPGLHWGHL*GSVLHF Trigger: AAAATGGAGAACGCTACCTCAGAGATGACCCCAATG...CAGCCCAGGCTTGTCGCAGCAGGGTACTCCAGGGAAGGGGAAAACGGTCTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
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| CDS-3UTR GCA 90 bp | ATCATTTTCCTGATAAGGTTTTCTTGCTGGAGCCTGGTGGAGCCTGAACCAACACCCAGGGTGAGGGCCTaGGTCACCAGGGAGGATAGG | + |
|
Preference number: 4 (lower is better) Translates to: IIFLIRFSCWSLVEPEPTPRVRA*VTREDR Trigger: CCTATCCTCCCTGGTGACGCAGGCCCTCACCCTGGG...TGTTGGTTCAGGCTCCACCAGGCTCCAGCAAGAAAACCTTATCAGGAAAATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
||
| CDS-3UTR GCA 90 bp | CCCTTCCCTGGAGTACCCTGCTGCGACAAGCCTGGGCTGATGACAGCTAGCCTTTTGGCTTGCCCATCTTaGTTCAGCTTCTTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PFPGVPCCDKPGLMTASLLACPS*FSFFFS Trigger: AGAGAAGAAGAAGCTGAAGCAAGATGGGCAAGCCAA...AAGGCTAGCTGTCATCAGCCCAGGCTTGTCGCAGCAGGGTACTCCAGGGAAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
||
| CDS-3UTR GCA 90 bp | TTTCTTGCTGGAGCCTGGTGGAGCCTGAACCAACAAACAACCCCAAGAAGTTCCCAGCTTCTTCTTCTCTaGGGCGTAGAAGCCCACACC | + |
|
Preference number: 4 (lower is better) Translates to: FLAGAWWSLNQQTTPRSSQLLLL*GVEAHT Trigger: GGTGTGGGCTTCTACGCCGCAGAGAAGAAGAAGCTG...GGAACTTCTTGGGGTTGTTTGTTGGTTCAGGCTCCACCAGGCTCCAGCAAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
||
| CDS-3UTR CCA 90 bp | TGCCAGATGGACTTGTGGAGGAGGATGGCTGGCGTCAGTCATGAAAATAAAATCCCATGGCTCCCAGGATaGAAGGAAACCACGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: CQMDLWRRMAGVSHENKIPWLPG*KETTRS Trigger: AGACCTCGTGGTTTCCTTCCATCCTGGGAGCCATGG...GATTTTATTTTCATGACTGACGCCAGCCATCCTCCTCCACAAGTCCATCTGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
||
| CDS-3UTR CCA 90 bp | CTGCTTCCTGCAAGACTCAGACCAATCTTCTTGGGACCCAAGGAAGAAAGCCAGGGTACGGTTGCTTCTTaGCACTGTCCTTGTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLPARLRPIFLGPKEESQGTVAS*HCPCLL Trigger: CAGAAGACAAGGACAGTGCCAAGAAGCAACCGTACC...CTGGCTTTCTTCCTTGGGTCCCAAGAAGATTGGTCTGAGTCTTGCAGGAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
||
| CDS-3UTR GCA 90 bp | GATTTAGCCAGTTTCTGCCTCAGGGTTGATACCTCCAACACATTCCGGAGAAAGCTTTCAGGGTACGGTTaGTTCTTGGCACTGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: DLASFCLRVDTSNTFRRKLSGYG*FLALSL Trigger: CAAGGACAGTGCCAAGAAGCAACCGTACCCTGAAAG...CTTTCTCCGGAATGTGTTGGAGGTATCAACCCTGAGGCAGAAACTGGCTAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
||
| 3UTR CAA 72 bp | TCGCCTCCTAAAGATGCTTATTCATGCCAGATGGACTaGTGGAGGAGGATGGCTGGCGTCAGTCATGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SPPKDAYSCQMD*WRRMAGVSHEN Trigger: ATTTTCATGACTGACGCCAGCCATCCTCCTCCACAAGTCCATCTGGCATGAATAAGCATCTTTAGGAGGCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
||
| CDS-3UTR GCA 90 bp | GATTTAGCCAGTTTCTGCCTCAGGGTTGATACCTCCAACACATTCCGGAGAAAGTTCTCCATTTTGGCTTaGCCATCTTGCTTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DLASFCLRVDTSNTFRRKFSILA*PSCFSF Trigger: GAAGCTGAAGCAAGATGGGCAAGCCAAAATGGAGAA...CTTTCTCCGGAATGTGTTGGAGGTATCAACCCTGAGGCAGAAACTGGCTAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
||
| CDS CCA 90 bp | GGCGCCCCTCCAGCCCAGGGTTTCCAGAAGATATCGGGCCAGCAGTaGCCAGAGGGTGACGCCCATGGAGAGTCCCATGGAGGCCAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GAPPAQGFQKISGQQ*PEGDAHGESHGGQC Trigger: GCACTGGCCTCCATGGGACTCTCCATGGGCGTCACCCTCTGGCCACTGCTGGCCCGATATCTTCTGGAAACCCTGGGCTGGAGGGGCGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS TCA 90 bp | AGCCCAGGGTTTCCAGAAGATATCGGGCCAGCAGTGGCCAGAGGGTaGCGCCCATGGAGAGTCCCATGGAGGCCAGTGCATTGGCTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: SPGFPEDIGPAVARG*RPWRVPWRPVHWLA Trigger: CGCTAGCCAATGCACTGGCCTCCATGGGACTCTCCATGGGCGTCACCCTCTGGCCACTGCTGGCCCGATATCTTCTGGAAACCCTGGGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS CCA 90 bp | AGATGCTGCACAGGGGTCCCCCACCGTGGACCATGGCTCCCAGGATaGAAGGAAACCACGAGGTCTCACTGTTGCTGGCCTGAAAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: RCCTGVPHRGPWLPG*KETTRSHCCWPESR Trigger: GCGACTTTCAGGCCAGCAACAGTGAGACCTCGTGGTTTCCTTCCATCCTGGGAGCCATGGTCCACGGTGGGGGACCCCTGTGCAGCATCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092445.12 ENSMUST00000153466.2 |
||
| CDS CCA 90 bp | TCTGTCGCCTTTGGCCCTGTGATCACTCCTGCGGTGAGGAAGAGGTaGGTGAGCGAGCCAGAGAAGGTGCTGACTACCATGCCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVAFGPVITPAVRKR*VSEPEKVLTTMPRL Trigger: CAGCCTGGGCATGGTAGTCAGCACCTTCTCTGGCTCGCTCACCCACCTCTTCCTCACCGCAGGAGTGATCACAGGGCCAAAGGCGACAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153466.2 |
||
| CDS GCA 90 bp | TGGCTCATGTTCCGTGTCTGTCGCCTTTGGCCCTGTGATCACTCCTaGGGTGAGGAAGAGGTGGGTGAGCGAGCCAGAGAAGGTGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: WLMFRVCRLWPCDHS*GEEEVGERAREGAD Trigger: GTCAGCACCTTCTCTGGCTCGCTCACCCACCTCTTCCTCACCGCAGGAGTGATCACAGGGCCAAAGGCGACAGACACGGAACATGAGCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153466.2 |
||
| CDS CCA 90 bp | AAACACATGCCCAGGCCTGTGATCACTCCTGCGGTGAGGAAGAGGTaGGTGAGCGAGCCAGAGAAGGTGCTGACTACCATGCCCAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KHMPRPVITPAVRKR*VSEPEKVLTTMPRL Trigger: CAGCCTGGGCATGGTAGTCAGCACCTTCTCTGGCTCGCTCACCCACCTCTTCCTCACCGCAGGAGTGATCACAGGCCTGGGCATGTGTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS CCA 90 bp | GGCCGCCGGCGGACAAAATACAAGCCCACTACCGTGATGCTCGACTaGAAGCTGAAACACATGCCCAGGCCTGTGATCACTCCTGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: GRRRTKYKPTTVMLD*KLKHMPRPVITPAV Trigger: CACCGCAGGAGTGATCACAGGCCTGGGCATGTGTTTCAGCTTCCAGTCGAGCATCACGGTAGTGGGCTTGTATTTTGTCCGCCGGCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS CCA 90 bp | TCTTGTCCAGCAGCAATCCCCCACCGTGGACCATGGCTCCCAGGATaGAAGGAAACCACGAGGTCTCACTGTTGCTGGCCTGAAAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SCPAAIPHRGPWLPG*KETTRSHCCWPESR Trigger: GCGACTTTCAGGCCAGCAACAGTGAGACCTCGTGGTTTCCTTCCATCCTGGGAGCCATGGTCCACGGTGGGGGATTGCTGCTGGACAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
||
| CDS CCA 90 bp | TGGGAGGTAGAAGGGGATCCTCTTTGGGCTCGGGGACCTCGTTGGTaGCAACAGGCCTCAGCAAGGCTCCACATACACAACAGTGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: WEVEGDPLWARGPRW*QQASARLHIHNSGV Trigger: TACTCCACTGTTGTGTATGTGGAGCCTTGCTGAGGCCTGTTGCCACCAACGAGGTCCCCGAGCCCAAAGAGGATCCCCTTCTACCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS CCA 90 bp | TCTTGGGAGGTAGAAGGGGATCCTCTTTGGGCTCGGGGACCTCGTTaGTGGCAACAGGCCTCAGCAAGGCTCCACATACACAACAGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SWEVEGDPLWARGPR*WQQASARLHIHNSG Trigger: TCCACTGTTGTGTATGTGGAGCCTTGCTGAGGCCTGTTGCCACCAACGAGGTCCCCGAGCCCAAAGAGGATCCCCTTCTACCTCCCAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS-3UTR CAA 90 bp | CCCTTCCCTGGAGTACCCTGCTGCGACAAGCCTGGGCTGATGACAGCTAGCCTTGGGTACGGTTGCTTCTaGGCACTGTCCTTGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: PFPGVPCCDKPGLMTASLGYGCF*ALSLSS Trigger: AGAAGACAAGGACAGTGCCAAGAAGCAACCGTACCC...AAGGCTAGCTGTCATCAGCCCAGGCTTGTCGCAGCAGGGTACTCCAGGGAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
||
| CDS TCA 90 bp | GCTCCCAGGATGGAAGGAAACCACGAGGTCTCACTGTTGCTGGCCTaGAAGTCGCGCTGCAGATCAGTGAAGAAGACACCGATGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: APRMEGNHEVSLLLA*KSRCRSVKKTPMQV Trigger: CACCTGCATCGGTGTCTTCTTCACTGATCTGCAGCGCGACTTTCAGGCCAGCAACAGTGAGACCTCGTGGTTTCCTTCCATCCTGGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092445.12 ENSMUST00000106532.4 ENSMUST00000153466.2 |
||
| CDS CCA 90 bp | CAATGTCCATTAGAACCTGGAAGACGAGGATCCCAACTCCACACATaGACAGGCTGTACACCAGGCAATAGCCCAGGAGCACCCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: QCPLEPGRRGSQLHT*TGCTPGNSPGAPGS Trigger: ACTTCCGGGTGCTCCTGGGCTATTGCCTGGTGTACAGCCTGTCCATGTGTGGAGTTGGGATCCTCGTCTTCCAGGTTCTAATGGACATTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS-3UTR CAA 90 bp | GATTTAGCCAGTTTCTGCCTCAGGGTTGATACCTCCAACACATTCCGGAGAAAGCCATCTGCCATCTGCTaGTTCCAGGGCCCGGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: DLASFCLRVDTSNTFRRKPSAIC*FQGPGH Trigger: ATGGCCCGGGCCCTGGAACAAGCAGATGGCAGATGG...CTTTCTCCGGAATGTGTTGGAGGTATCAACCCTGAGGCAGAAACTGGCTAAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
||
| CDS TCA 90 bp | CATATTGTGCCGAAGGATGTCAAAGGCCAGGTGGTACCGAATGGTTaGGACACATGTTGCCAGGCAGCTGCGTGTAGGTATCTTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: HIVPKDVKGQVVPNG*DTCCQAAACRYLGR Trigger: CCTCCCAAGATACCTACACGCAGCTGCCTGGCAACATGTGTCTCAACCATTCGGTACCACCTGGCCTTTGACATCCTTCGGCACAATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS CCA 90 bp | GTAGCTGAAGTTGTTGGTCTTGTCCAGCAGCAATCCAGCCAATGGTaGAGAGATGAGAGAAGTCACGCCACACAGGATGGTGAAGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VAEVVGLVQQQSSQW*RDERSHATQDGEEA Trigger: GGCCTCTTCACCATCCTGTGTGGCGTGACTTCTCTCATCTCTCCACCATTGGCTGGATTGCTGCTGGACAAGACCAACAACTTCAGCTAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS-3UTR CAA 90 bp | GGAGCCTGGTGGAGCCTGAACCAACAAACAACCCCAAGAAGTTCCTGCCAGCCTTTTGGCTTGCCCATCTaGCTTCAGCTTCTTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GAWWSLNQQTTPRSSCQPFGLPI*LQLLLL Trigger: GAGAAGAAGAAGCTGAAGCAAGATGGGCAAGCCAAA...AGGCTGGCAGGAACTTCTTGGGGTTGTTTGTTGGTTCAGGCTCCACCAGGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
||
| CDS GCA 90 bp | TTCATCCACGTCACGCCCGTGACGTATATGCAGAAGCCCATATTGTaGCGAAGGATGTCAAAGGCCAGGTGGTACCGAATGGTTGAGACA | + |
|
Preference number: 5 (lower is better) Translates to: FIHVTPVTYMQKPIL*RRMSKARWYRMVET Trigger: TGTCTCAACCATTCGGTACCACCTGGCCTTTGACATCCTTCGGCACAATATGGGCTTCTGCATATACGTCACGGGCGTGACGTGGATGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS-3UTR CAA 90 bp | CTGCTTCCTGCAAGACTCAGACCAATCTTCTTGGGACCCAAGGAAGAAAGCCAGCTGAAGTTGTTGGTCTaGTCCAGCAGCAATCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLPARLRPIFLGPKEESQLKLLV*SSSNPP Trigger: TGGGGGATTGCTGCTGGACAAGACCAACAACTTCAG...CTGGCTTTCTTCCTTGGGTCCCAAGAAGATTGGTCTGAGTCTTGCAGGAAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
||
| CDS TCA 90 bp | CTTCTTCTCTGCGGCGTAGAAGCCCACACCCAGGATAAGAGAGCCTaGGACGAGGAAGCCACTCGACATATAGAAAACGTAGCTGAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LLLCGVEAHTQDKRA*DEEATRHIENVAEV Trigger: AACTTCAGCTACGTTTTCTATATGTCGAGTGGCTTCCTCGTCTCAGGCTCTCTTATCCTGGGTGTGGGCTTCTACGCCGCAGAGAAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092445.12 ENSMUST00000106532.4 |
||
| CDS-3UTR CAA 90 bp | GTATATAATTCAGACCGTTTTCCCCTTCCCTGGAGTACCCTGCTGCGACAAGCCGTTCTCCATTTTGGCTaGCCCATCTTGCTTCAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VYNSDRFPLPWSTLLRQAVLHFG*PILLQL Trigger: AAGCTGAAGCAAGATGGGCAAGCCAAAATGGAGAAC...GGCTTGTCGCAGCAGGGTACTCCAGGGAAGGGGAAAACGGTCTGAATTATATAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
||
| CDS-3UTR CAA 90 bp | TGTTCCTTAAGTTACCTAGCCTGTCTTCTTGGCTCCTGGTTAGTCAAGGTCTGCGTAGCGTTCTCCATTTaGGCTTGCCCATCTTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CSLSYLACLLGSWLVKVCVAFSI*ACPSCF Trigger: GAAGCAAGATGGGCAAGCCAAAATGGAGAACGCTAC...GCAGACCTTGACTAACCAGGAGCCAAGAAGACAGGCTAGGTAACTTAAGGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
||
| CDS CAA 90 bp | GGCCAGAGGGTGACGCCCATGGAGAGTCCCATGGAGGCCAGTGCATaGGCTAGCGGCCGCCGGCGGACAAAATACAAGCCCACTACCGTG | + |
|
Preference number: 6 (lower is better) Translates to: GQRVTPMESPMEASA*ASGRRRTKYKPTTV Trigger: CACGGTAGTGGGCTTGTATTTTGTCCGCCGGCGGCCGCTAGCCAATGCACTGGCCTCCATGGGACTCTCCATGGGCGTCACCCTCTGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS CCA 72 bp | ACAGGGGTCCCCCACCGTGGACCATGGCTCCCAGGATaGAAGGAAACCACGAGGTCTCACTGTTGCTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TGVPHRGPWLPG*KETTRSHCCWP Trigger: AGGCCAGCAACAGTGAGACCTCGTGGTTTCCTTCCATCCTGGGAGCCATGGTCCACGGTGGGGGACCCCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000092445.12 ENSMUST00000153466.2 |
||
| CDS CCA 72 bp | CCAGCCCAGGGTTTCCAGAAGATATCGGGCCAGCAGTaGCCAGAGGGTGACGCCCATGGAGAGTCCCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: PAQGFQKISGQQ*PEGDAHGESHG Trigger: TCCATGGGACTCTCCATGGGCGTCACCCTCTGGCCACTGCTGGCCCGATATCTTCTGGAAACCCTGGGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS CCA 72 bp | CCCAGGCCTGTGATCACTCCTGCGGTGAGGAAGAGGTaGGTGAGCGAGCCAGAGAAGGTGCTGACTACCATG | + |
|
Preference number: 6 (lower is better) Translates to: PRPVITPAVRKR*VSEPEKVLTTM Trigger: CATGGTAGTCAGCACCTTCTCTGGCTCGCTCACCCACCTCTTCCTCACCGCAGGAGTGATCACAGGCCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS CCA 72 bp | GCAGCAATCCCCCACCGTGGACCATGGCTCCCAGGATaGAAGGAAACCACGAGGTCTCACTGTTGCTGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: AAIPHRGPWLPG*KETTRSHCCWP Trigger: AGGCCAGCAACAGTGAGACCTCGTGGTTTCCTTCCATCCTGGGAGCCATGGTCCACGGTGGGGGATTGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106532.4 |
||
| CDS CAA 90 bp | AGGCAGCTGCGTGTAGGTATCTTGGGAGGTAGAAGGGGATCCTCTTaGGGCTCGGGGACCTCGTTGGTGGCAACAGGCCTCAGCAAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: RQLRVGILGGRRGSS*GSGTSLVATGLSKA Trigger: AGCCTTGCTGAGGCCTGTTGCCACCAACGAGGTCCCCGAGCCCAAAGAGGATCCCCTTCTACCTCCCAAGATACCTACACGCAGCTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS TCA 72 bp | CACTGTTGCTGGCCTGAAAGTCGCGCTGCAGATCAGTaGAGAAGACACCGATGCAGGTGGGGAAGCCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: HCCWPESRAADQ*RRHRCRWGSPG Trigger: CCCTGGGCTTCCCCACCTGCATCGGTGTCTTCTTCACTGATCTGCAGCGCGACTTTCAGGCCAGCAACAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092445.12 ENSMUST00000106532.4 ENSMUST00000153466.2 |
||
| CDS TCA 72 bp | TTTCCAGAAGATATCGGGCCAGCAGTGGCCAGAGGGTaGCGCCCATGGAGAGTCCCATGGAGGCCAGTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: FPEDIGPAVARG*RPWRVPWRPVH Trigger: ATGCACTGGCCTCCATGGGACTCTCCATGGGCGTCACCCTCTGGCCACTGCTGGCCCGATATCTTCTGGAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS GCA 72 bp | TTCCGTGTCTGTCGCCTTTGGCCCTGTGATCACTCCTaGGGTGAGGAAGAGGTGGGTGAGCGAGCCAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FRVCRLWPCDHS*GEEEVGERARE Trigger: TTCTCTGGCTCGCTCACCCACCTCTTCCTCACCGCAGGAGTGATCACAGGGCCAAAGGCGACAGACACGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153466.2 |
||
| CDS CCA 72 bp | GAAGGGGATCCTCTTTGGGCTCGGGGACCTCGTTGGTaGCAACAGGCCTCAGCAAGGCTCCACATACACAAC | + |
|
Preference number: 6 (lower is better) Translates to: EGDPLWARGPRW*QQASARLHIHN Trigger: GTTGTGTATGTGGAGCCTTGCTGAGGCCTGTTGCCACCAACGAGGTCCCCGAGCCCAAAGAGGATCCCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS CAA 72 bp | GGTAGAAGGGGATCCTCTTTGGGCTCGGGGACCTCGTaGGTGGCAACAGGCCTCAGCAAGGCTCCACATACA | + |
|
Preference number: 6 (lower is better) Translates to: GRRGSSLGSGTS*VATGLSKAPHT Trigger: TGTATGTGGAGCCTTGCTGAGGCCTGTTGCCACCAACGAGGTCCCCGAGCCCAAAGAGGATCCCCTTCTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS CAA 90 bp | ATCTTGGGAGGTAGAAGGGGATCCTCTTTGGGCTCGGGGACCTCGTaGGTGGCAACAGGCCTCAGCAAGGCTCCACATACACAACAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ILGGRRGSSLGSGTS*VATGLSKAPHTQQW Trigger: CCACTGTTGTGTATGTGGAGCCTTGCTGAGGCCTGTTGCCACCAACGAGGTCCCCGAGCCCAAAGAGGATCCCCTTCTACCTCCCAAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS GCA 72 bp | GAAGCTGAAACACATGCCCAGGCCTGTGATCACTCCTaGGGTGAGGAAGAGGTGGGTGAGCGAGCCAGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: EAETHAQACDHS*GEEEVGERARE Trigger: TTCTCTGGCTCGCTCACCCACCTCTTCCTCACCGCAGGAGTGATCACAGGCCTGGGCATGTGTTTCAGCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS CCA 72 bp | TTTGGCCCTGTGATCACTCCTGCGGTGAGGAAGAGGTaGGTGAGCGAGCCAGAGAAGGTGCTGACTACCATG | + |
|
Preference number: 6 (lower is better) Translates to: FGPVITPAVRKR*VSEPEKVLTTM Trigger: CATGGTAGTCAGCACCTTCTCTGGCTCGCTCACCCACCTCTTCCTCACCGCAGGAGTGATCACAGGGCCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153466.2 |
||
| CDS CCA 72 bp | GCAACAGGCCTCAGCAAGGCTCCACATACACAACAGTaGAGTAAGATGCCACCGAAGATGAGGAAGGCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: ATGLSKAPHTQQ*SKMPPKMRKAP Trigger: GGGCGCCTTCCTCATCTTCGGTGGCATCTTACTCCACTGTTGTGTATGTGGAGCCTTGCTGAGGCCTGTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS CAA 72 bp | AGCACCCGGAAGTCGGCTGACACCGTGCATATTAGATaGGTGAGCCCGTTGATGAGGATCGCCACAGCAAAC | + |
|
Preference number: 6 (lower is better) Translates to: STRKSADTVHIR*VSPLMRIATAN Trigger: GTTTGCTGTGGCGATCCTCATCAACGGGCTCACCAATCTAATATGCACGGTGTCAGCCGACTTCCGGGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
||
| CDS TCA 72 bp | ATGGAAGGAAACCACGAGGTCTCACTGTTGCTGGCCTaGAAGTCGCGCTGCAGATCAGTGAAGAAGACACCG | + |
|
Preference number: 6 (lower is better) Translates to: MEGNHEVSLLLA*KSRCRSVKKTP Trigger: CGGTGTCTTCTTCACTGATCTGCAGCGCGACTTTCAGGCCAGCAACAGTGAGACCTCGTGGTTTCCTTCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092445.12 ENSMUST00000106532.4 ENSMUST00000153466.2 |
||
| CDS TCA 72 bp | CCGAAGGATGTCAAAGGCCAGGTGGTACCGAATGGTTaGGACACATGTTGCCAGGCAGCTGCGTGTAGGTAT | + |
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Preference number: 6 (lower is better) Translates to: PKDVKGQVVPNG*DTCCQAAACRY Trigger: ATACCTACACGCAGCTGCCTGGCAACATGTGTCTCAACCATTCGGTACCACCTGGCCTTTGACATCCTTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
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| CDS TCA 72 bp | GCAGTGCAAAACCCAGGTTCATCCACGTCACGCCCGTaGCGTATATGCAGAAGCCCATATTGTGCCGAAGGA | + |
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Preference number: 6 (lower is better) Translates to: AVQNPGSSTSRP*RICRSPYCAEG Trigger: TCCTTCGGCACAATATGGGCTTCTGCATATACGTCACGGGCGTGACGTGGATGAACCTGGGTTTTGCACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
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| CDS CCA 72 bp | TTAGAACCTGGAAGACGAGGATCCCAACTCCACACATaGACAGGCTGTACACCAGGCAATAGCCCAGGAGCA | + |
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Preference number: 6 (lower is better) Translates to: LEPGRRGSQLHT*TGCTPGNSPGA Trigger: TGCTCCTGGGCTATTGCCTGGTGTACAGCCTGTCCATGTGTGGAGTTGGGATCCTCGTCTTCCAGGTTCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
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| CDS CCA 72 bp | GGGAACCGATCCATCGGGACAATGTCCATTAGAACCTaGAAGACGAGGATCCCAACTCCACACATGGACAGG | + |
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Preference number: 6 (lower is better) Translates to: GNRSIGTMSIRT*KTRIPTPHMDR Trigger: CCTGTCCATGTGTGGAGTTGGGATCCTCGTCTTCCAGGTTCTAATGGACATTGTCCCGATGGATCGGTTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
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| CDS CAA 90 bp | AGGTTCATCCACGTCACGCCCGTGACGTATATGCAGAAGCCCATATaGTGCCGAAGGATGTCAAAGGCCAGGTGGTACCGAATGGTTGAG | + |
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Preference number: 6 (lower is better) Translates to: RFIHVTPVTYMQKPI*CRRMSKARWYRMVE Trigger: CTCAACCATTCGGTACCACCTGGCCTTTGACATCCTTCGGCACAATATGGGCTTCTGCATATACGTCACGGGCGTGACGTGGATGAACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
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| CDS CCA 72 bp | CGGACAAAATACAAGCCCACTACCGTGATGCTCGACTaGAAGCTGAAACACATGCCCAGGCCTGTGATCACT | + |
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Preference number: 6 (lower is better) Translates to: RTKYKPTTVMLD*KLKHMPRPVIT Trigger: AGTGATCACAGGCCTGGGCATGTGTTTCAGCTTCCAGTCGAGCATCACGGTAGTGGGCTTGTATTTTGTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
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| CDS CCA 72 bp | GTTGTTGGTCTTGTCCAGCAGCAATCCAGCCAATGGTaGAGAGATGAGAGAAGTCACGCCACACAGGATGGT | + |
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Preference number: 6 (lower is better) Translates to: VVGLVQQQSSQW*RDERSHATQDG Trigger: ACCATCCTGTGTGGCGTGACTTCTCTCATCTCTCCACCATTGGCTGGATTGCTGCTGGACAAGACCAACAAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
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| CDS CCA 72 bp | GAAGTTGTTGGTCTTGTCCAGCAGCAATCCAGCCAATaGTGGAGAGATGAGAGAAGTCACGCCACACAGGAT | + |
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Preference number: 6 (lower is better) Translates to: EVVGLVQQQSSQ*WRDERSHATQD Trigger: ATCCTGTGTGGCGTGACTTCTCTCATCTCTCCACCATTGGCTGGATTGCTGCTGGACAAGACCAACAACTTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092445.12 |
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| CDS CAA 72 bp | ATGCTTTCAGGGTACGGTTGCTTCTTGGCACTGTCCTaGTCTTCTGAGGTGAGATCGTGCATTGGGGTCATC | + |
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Preference number: 6 (lower is better) Translates to: MLSGYGCFLALS*SSEVRSCIGVI Trigger: GATGACCCCAATGCACGATCTCACCTCAGAAGACAAGGACAGTGCCAAGAAGCAACCGTACCCTGAAAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092445.12 ENSMUST00000106532.4 |
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| CDS GCA 72 bp | TTCTTGGCACTGTCCTTGTCTTCTGAGGTGAGATCGTaGATTGGGGTCATCTCTGAGGTAGCGTTCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: FLALSLSSEVRS*IGVISEVAFSI Trigger: AATGGAGAACGCTACCTCAGAGATGACCCCAATGCACGATCTCACCTCAGAAGACAAGGACAGTGCCAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092445.12 ENSMUST00000106532.4 |
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