Pregenerated sensors for SLC16A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027896Ensembl transcript IDs: ENSMUST00000029502.14, ENSMUST00000106723.2
Found 79 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TTATTACTCATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGACAAAGACTTTTCTTCTaGGCTTTTGCTTACAGTAGC | + |
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Preference number: 2 (lower is better) Translates to: LLLIYYSFHQLTFLAVLRQRLFF*AFAYSS Trigger: GCTACTGTAAGCAAAAGCTCAGAAGAAAAGTCTTTG...TCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATGAGTAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| 3UTR GCA 72 bp | ATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTaGCATCTCGCTTGTCTTCCATTCCTTCTAGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: IPFYLSRQRTLL*HLACLPFLLVS Trigger: GGAGACTAGAAGGAATGGAAGACAAGCGAGATGGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR CCA 90 bp | TTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGCCATCTCGCTTGTCTTCGGAGTGGGAATGTGGTaGCTAAAGGAGCAAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: FPFICPDRELCSAISLVFGVGMW*LKEQAG Trigger: ACCTGCTTGCTCCTTTAGCCACCACATTCCCACTCC...GAAGACAAGCGAGATGGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR TCA 90 bp | CATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGAAAGTAGGAAACGGCCTGTTCCTGTaGGGCCTATTGCTGAACTCT | + |
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Preference number: 4 (lower is better) Translates to: HLLLLPPVDIPGSAKKVGNGLFL*GLLLNS Trigger: AGAGTTCAGCAATAGGCCTCACAGGAACAGGCCGTT...TCCTACTTTCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR TCA 90 bp | GCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGCCATCTAACGGCCTGTTCCTGTaGGGCCTATTGCTGAACTCT | + |
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Preference number: 4 (lower is better) Translates to: ALVYSLLFVQTENFALPSNGLFL*GLLLNS Trigger: AGAGTTCAGCAATAGGCCTCACAGGAACAGGCCGTT...AGATGGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR CCA 90 bp | CATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGAAAGTAGGACTCCATCAAGGGGTTTaGTGTAAGGGGAGGGCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: HLLLLPPVDIPGSAKKVGLHQGV*CKGRAF Trigger: AAACGCCCTCCCCTTACACCAAACCCCTTGATGGAG...TCCTACTTTCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CCA 90 bp | GCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGCCATCTCTCCATCAAGGGGTTTaGTGTAAGGGGAGGGCGTTT | + |
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Preference number: 4 (lower is better) Translates to: ALVYSLLFVQTENFALPSLHQGV*CKGRAF Trigger: AAACGCCCTCCCCTTACACCAAACCCCTTGATGGAG...AGATGGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| 3UTR CAA 72 bp | TTTGTCCAGACAGAGAACTTTGCTCTGCCATCTCGCTaGTCTTCCATTCCTTCTAGTCTCCTCACTGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: FVQTENFALPSR*SSIPSSLLTGT Trigger: AGTTCCAGTGAGGAGACTAGAAGGAATGGAAGACAAGCGAGATGGCAGAGCAAAGTTCTCTGTCTGGACAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR GCA 90 bp | GCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGCCATCTGCTCCTGTGTCTCCTTaGACTTCGATGTCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALVYSLLFVQTENFALPSAPVSP*TSMSLS Trigger: AGACAGAGACATCGAAGTGCAAGGAGACACAGGAGC...AGATGGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR TCA 90 bp | AGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGCCATCTCGCTTTGTCTCTGTCTTGTATaGTGCCTCTGGTTCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SVFPFICPDRELCSAISLCLCLV*CLWFSC Trigger: GCAACTGAACCAGAGGCATCATACAAGACAGAGACA...AAGCGAGATGGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR CCA 90 bp | CATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGAAAGTAGGATATCCAGCCTGCTATTaGTGGTCCAGAAAGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLLLLPPVDIPGSAKKVGYPACY*WSRKYS Trigger: GCTGTACTTTCTGGACCACCAATAGCAGGCTGGATA...TCCTACTTTCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR TCA 90 bp | CATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGAAAGTAGGAGTCAGAATTGTTGTTTaGTTGGCTGTGGATGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HLLLLPPVDIPGSAKKVGVRIVV*LAVDGS Trigger: AGACCCATCCACAGCCAATCAAACAACAATTCTGAC...TCCTACTTTCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR TCA 90 bp | GCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGCCATCTGTCAGAATTGTTGTTTaGTTGGCTGTGGATGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALVYSLLFVQTENFALPSVRIVV*LAVDGS Trigger: AGACCCATCCACAGCCAATCAAACAACAATTCTGAC...AGATGGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR TCA 90 bp | TCCAGCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGCCTCACACCACACAGAATaGGGTAAGACTTGTGGTATT | + |
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Preference number: 4 (lower is better) Translates to: SSVSVFPFICPDRELCSASHHTE*GKTCGI Trigger: AATACCACAAGTCTTACCTCATTCTGTGTGGTGTGA...GGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR GCA 90 bp | TTATTACTCATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGATCCAGAACGGGCAATTaGTGTAGAAAGGCCCAATCG | + |
|
Preference number: 4 (lower is better) Translates to: LLLIYYSFHQLTFLAVLRSRTGN*CRKAQS Trigger: CGATTGGGCCTTTCTACAGCAATTGCCCGTTCTGGA...TCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATGAGTAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR GCA 90 bp | TTATTACTCATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGAGCTCCTGTGTCTCCTTaGACTTCGATGTCTCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLIYYSFHQLTFLAVLRAPVSP*TSMSLS Trigger: AGACAGAGACATCGAAGTGCAAGGAGACACAGGAGC...TCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATGAGTAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR TCA 90 bp | CATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGAAAGTAGGAGGTGGAAAGTGGGAATaGAATATGCTAATTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HLLLLPPVDIPGSAKKVGGGKWE*NMLIGS Trigger: TGAGCCAATTAGCATATTTCATTCCCACTTTCCACC...TCCTACTTTCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR TCA 90 bp | AGCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGCCATCGGTGGAAAGTGGGAATaGAATATGCTAATTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SVSVFPFICPDRELCSAIGGKWE*NMLIGS Trigger: TGAGCCAATTAGCATATTTCATTCCCACTTTCCACC...GATGGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR GCA 90 bp | AGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGCCATCTCGCTTCCAATCCAACCAATTTaGTCTGAAGTGCCTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVFPFICPDRELCSAISLPIQPI*SEVPSN Trigger: GTTTGAAGGCACTTCAGAGCAAATTGGTTGGATTGG...AAGCGAGATGGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR GCA 90 bp | AGCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGCCATCTGCCTCTGGTTCAGTTaGAGACAAAATGCTACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SVSVFPFICPDRELCSAICLWFS*RQNATF Trigger: AAAGGTAGCATTTTGTCTGCAACTGAACCAGAGGCA...GATGGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR CCA 90 bp | GCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGCCATCTGTCTTAAGAGCATGCTaGAAGGCACCAAGTTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: ALVYSLLFVQTENFALPSVLRAC*KAPSSI Trigger: TATTGAACTTGGTGCCTTCCAGCATGCTCTTAAGAC...AGATGGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR CCA 90 bp | CATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGAAAGTAGGATTGTTTGATTGGCTGTaGATGGGTCTTAAGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: HLLLLPPVDIPGSAKKVGLFDWL*MGLKSM Trigger: CATGCTCTTAAGACCCATCCACAGCCAATCAAACAA...TCCTACTTTCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CCA 90 bp | TCTCCAGCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGGCTCTGGCTACTAGGTaGAAAGTGGGAATGAAATAT | + |
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Preference number: 4 (lower is better) Translates to: SPALVYSLLFVQTENFALALATR*KVGMKY Trigger: ATATTTCATTCCCACTTTCCACCTAGTAGCCAGAGC...CAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGCTGGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR CCA 90 bp | AACTCTATGGCTTGCTTTCTTAACAAAGACTTTTCTTCTGAGCTTTTGCTTACAGGAGTGGGAATGTGGTaGCTAAAGGAGCAAGCAGGT | + |
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Preference number: 4 (lower is better) Translates to: NSMACFLNKDFSSELLLTGVGMW*LKEQAG Trigger: ACCTGCTTGCTCCTTTAGCCACCACATTCCCACTCC...TGTAAGCAAAAGCTCAGAAGAAAAGTCTTTGTTAAGAAAGCAAGCCATAGAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CCA 90 bp | CATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGAAAGTAGGAAGCCACCAGCAAAAATaGCAAAAAGGATGGTATAGG | + |
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Preference number: 4 (lower is better) Translates to: HLLLLPPVDIPGSAKKVGSHQQK*QKGWYR Trigger: CCTATACCATCCTTTTTGCCATTTTTGCTGGTGGCT...TCCTACTTTCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CCA 90 bp | TTATTACTCATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGACCAGCCTGCTATTGGTaGTCCAGAAAGTACAGCTAT | + |
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Preference number: 4 (lower is better) Translates to: LLLIYYSFHQLTFLAVLRPACYW*SRKYSY Trigger: ATAGCTGTACTTTCTGGACCACCAATAGCAGGCTGG...TCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATGAGTAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CCA 90 bp | TCCAGCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGCCTACATCTGCTATTGGTaGTCCAGAAAGTACAGCTAT | + |
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Preference number: 4 (lower is better) Translates to: SSVSVFPFICPDRELCSAYICYW*SRKYSY Trigger: ATAGCTGTACTTTCTGGACCACCAATAGCAGATGTA...GGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGCTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR GCA 90 bp | ATTCCTGGCAGTGCTAAGAAAGTAGGAAGGAATCTTAAAAACTCTATGGCTTGCCCAATCCAACCAATTTaGTCTGAAGTGCCTTCAAAC | + |
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Preference number: 4 (lower is better) Translates to: IPGSAKKVGRNLKNSMACPIQPI*SEVPSN Trigger: GTTTGAAGGCACTTCAGAGCAAATTGGTTGGATTGG...GCAAGCCATAGAGTTTTTAAGATTCCTTCCTACTTTCTTAGCACTGCCAGGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR GCA 90 bp | TTATTACTCATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGAGAAGGTCAGACTGTTTaGGTTTCCATCTTTCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: LLLIYYSFHQLTFLAVLREGQTV*VSIFQP Trigger: TGGCTGAAAGATGGAAACGCAAACAGTCTGACCTTC...TCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATGAGTAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CCA 90 bp | AACTCTATGGCTTGCTTTCTTAACAAAGACTTTTCTTCTGAGCTTTTGCTTACACAGGTAGCAGCCCCATaGTCACACAAAGAAAGGGAA | + |
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Preference number: 4 (lower is better) Translates to: NSMACFLNKDFSSELLLTQVAAP*SHKERE Trigger: TTCCCTTTCTTTGTGTGACCATGGGGCTGCTACCTG...TGTAAGCAAAAGCTCAGAAGAAAAGTCTTTGTTAAGAAAGCAAGCCATAGAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR TCA 90 bp | TCTGATTTTCATTTAATAGTAAAGGAGCTGCTTCAATGGATTCAGTTTGTAGCCTGTCTCTGTCTTGTATaGTGCCTCTGGTTCAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: SDFHLIVKELLQWIQFVACLCLV*CLWFSC Trigger: GCAACTGAACCAGAGGCATCATACAAGACAGAGACA...GGCTACAAACTGAATCCATTGAAGCAGCTCCTTTACTATTAAATGAAAATCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR GCA 90 bp | CATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGAAAGTAGGACAATTTGCTCTGAAGTaGCTTCAAACTCTTCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: HLLLLPPVDIPGSAKKVGQFALK*LQTLLE Trigger: TTCAAGAAGAGTTTGAAGGCACTTCAGAGCAAATTG...TCCTACTTTCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR GCA 90 bp | AGCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGCCATCCAATTTGCTCTGAAGTaGCTTCAAACTCTTCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: SVSVFPFICPDRELCSAIQFALK*LQTLLE Trigger: TTCAAGAAGAGTTTGAAGGCACTTCAGAGCAAATTG...GATGGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR CCA 90 bp | AATTCTCCAGCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTTTGTTTGATTGGCTGTaGATGGGTCTTAAGAGCATG | + |
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Preference number: 4 (lower is better) Translates to: NSPALVYSLLFVQTENFALFDWL*MGLKSM Trigger: CATGCTCTTAAGACCCATCCACAGCCAATCAAACAA...AGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGCTGGAGAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR CCA 90 bp | AGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGCCATCTCGCTTATGAAATATGCTAATTaGCTCAGGAGAAAAGACCAG | + |
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Preference number: 4 (lower is better) Translates to: SVFPFICPDRELCSAISLMKYAN*LRRKDQ Trigger: CTGGTCTTTTCTCCTGAGCCAATTAGCATATTTCAT...AAGCGAGATGGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR CCA 90 bp | TTATTACTCATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGAGCTCTGGCTACTAGGTaGAAAGTGGGAATGAAATAT | + |
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Preference number: 4 (lower is better) Translates to: LLLIYYSFHQLTFLAVLRALATR*KVGMKY Trigger: ATATTTCATTCCCACTTTCCACCTAGTAGCCAGAGC...TCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATGAGTAATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CCA 90 bp | AATTCTCCAGCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTAGCCACCAGCAAAAATaGCAAAAAGGATGGTATAGG | + |
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Preference number: 4 (lower is better) Translates to: NSPALVYSLLFVQTENFASHQQK*QKGWYR Trigger: CCTATACCATCCTTTTTGCCATTTTTGCTGGTGGCT...AGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGCTGGAGAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR CCA 90 bp | TTATTACTCATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGATCCCGGCAAAGAAACTaGCATATCCCAAAAACTTGT | + |
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Preference number: 4 (lower is better) Translates to: LLLIYYSFHQLTFLAVLRSRQRN*HIPKTC Trigger: ACAAGTTTTTGGGATATGCCAGTTTCTTTGCCGGGA...TCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATGAGTAATAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CCA 90 bp | AAATTCTCCAGCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCCCGGCAAAGAAACTaGCATATCCCAAAAACTTGT | + |
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Preference number: 4 (lower is better) Translates to: KFSSVSVFPFICPDRELCSRQRN*HIPKTC Trigger: ACAAGTTTTTGGGATATGCCAGTTTCTTTGCCGGGA...GCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGCTGGAGAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR TCA 90 bp | TTATTACTCATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGACTGAACTCTTCGCTTTaGTTTCCTAAGACAGTTAAG | + |
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Preference number: 4 (lower is better) Translates to: LLLIYYSFHQLTFLAVLRLNSSL*FPKTVK Trigger: CTTAACTGTCTTAGGAAATCAAAGCGAAGAGTTCAG...TCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATGAGTAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR GCA 90 bp | GCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGCCATCTCAGTTGCAGACAAAATaGTACCTTTGTTTTCAATGT | + |
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Preference number: 4 (lower is better) Translates to: ALVYSLLFVQTENFALPSQLQTK*YLCFQC Trigger: ACATTGAAAACAAAGGTAGCATTTTGTCTGCAACTG...AGATGGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR CCA 90 bp | TTATTACTCATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGAGAATTGTTGTTTGATTaGCTGTGGATGGGTCTTAAG | + |
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Preference number: 4 (lower is better) Translates to: LLLIYYSFHQLTFLAVLRELLFD*LWMGLK Trigger: CTTAAGACCCATCCACAGCCAATCAAACAACAATTC...TCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATGAGTAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CCA 90 bp | ATTCCTGGCAGTGCTAAGAAAGTAGGAAGGAATCTTAAAAACTCTATGGCTTGCATGAAATATGCTAATTaGCTCAGGAGAAAAGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: IPGSAKKVGRNLKNSMACMKYAN*LRRKDQ Trigger: CTGGTCTTTTCTCCTGAGCCAATTAGCATATTTCAT...GCAAGCCATAGAGTTTTTAAGATTCCTTCCTACTTTCTTAGCACTGCCAGGAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR TCA 90 bp | AACTCTATGGCTTGCTTTCTTAACAAAGACTTTTCTTCTGAGCTTTTGCTTACATCACACCACACAGAATaGGGTAAGACTTGTGGTATT | + |
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Preference number: 4 (lower is better) Translates to: NSMACFLNKDFSSELLLTSHHTE*GKTCGI Trigger: AATACCACAAGTCTTACCTCATTCTGTGTGGTGTGA...TGTAAGCAAAAGCTCAGAAGAAAAGTCTTTGTTAAGAAAGCAAGCCATAGAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR GCA 90 bp | TCTGATTTTCATTTAATAGTAAAGGAGCTGCTTCAATGGATTCAGTTTGTAGCCTGCCTCTGGTTCAGTTaGAGACAAAATGCTACCTTT | + |
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Preference number: 4 (lower is better) Translates to: SDFHLIVKELLQWIQFVACLWFS*RQNATF Trigger: AAAGGTAGCATTTTGTCTGCAACTGAACCAGAGGCA...GGCTACAAACTGAATCCATTGAAGCAGCTCCTTTACTATTAAATGAAAATCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR GCA 90 bp | TCTGATTTTCATTTAATAGTAAAGGAGCTGCTTCAATGGATTCAGTTTGTAGCCAGAGGATATAGCAGGTaGCAGAGAAATAGAAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: SDFHLIVKELLQWIQFVARGYSR*QRNRKS Trigger: GCTCTTTCTATTTCTCTGGCACCTGCTATATCCTCT...GGCTACAAACTGAATCCATTGAAGCAGCTCCTTTACTATTAAATGAAAATCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CCA 90 bp | ATTCCTGGCAGTGCTAAGAAAGTAGGAAGGAATCTTAAAAACTCTATGGCTTGCAAATTGCAAATGTCTTaGTCATTCCCATCACAAACA | + |
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Preference number: 4 (lower is better) Translates to: IPGSAKKVGRNLKNSMACKLQMS*SFPSQT Trigger: TGTTTGTGATGGGAATGACCAAGACATTTGCAATTT...GCAAGCCATAGAGTTTTTAAGATTCCTTCCTACTTTCTTAGCACTGCCAGGAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CCA 90 bp | AACTCTATGGCTTGCTTTCTTAACAAAGACTTTTCTTCTGAGCTTTTGCTTACAGTCTTAAGAGCATGCTaGAAGGCACCAAGTTCAATA | + |
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Preference number: 4 (lower is better) Translates to: NSMACFLNKDFSSELLLTVLRAC*KAPSSI Trigger: TATTGAACTTGGTGCCTTCCAGCATGCTCTTAAGAC...TGTAAGCAAAAGCTCAGAAGAAAAGTCTTTGTTAAGAAAGCAAGCCATAGAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CCA 90 bp | AATGAACAGTTTACAAATTCTCCAGCGTTAGTGTATTCCCTTTTATTTGTCCAGAGTTACATCTGCTATTaGTGGTCCAGAAAGTACAGC | + |
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Preference number: 4 (lower is better) Translates to: NEQFTNSPALVYSLLFVQSYICY*WSRKYS Trigger: GCTGTACTTTCTGGACCACCAATAGCAGATGTAACT...CTGGACAAATAAAAGGGAATACACTAACGCTGGAGAATTTGTAAACTGTTCATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR CCA 90 bp | AATGAACAGTTTACAAATTCTCCAGCGTTAGTGTATTCCCTTTTATTTGTCCAGGAATTGTTGTTTGATTaGCTGTGGATGGGTCTTAAG | + |
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Preference number: 4 (lower is better) Translates to: NEQFTNSPALVYSLLFVQELLFD*LWMGLK Trigger: CTTAAGACCCATCCACAGCCAATCAAACAACAATTC...CTGGACAAATAAAAGGGAATACACTAACGCTGGAGAATTTGTAAACTGTTCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR GCA 90 bp | AACTCTATGGCTTGCTTTCTTAACAAAGACTTTTCTTCTGAGCTTTTGCTTACACAGTTGCAGACAAAATaGTACCTTTGTTTTCAATGT | + |
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Preference number: 4 (lower is better) Translates to: NSMACFLNKDFSSELLLTQLQTK*YLCFQC Trigger: ACATTGAAAACAAAGGTAGCATTTTGTCTGCAACTG...TGTAAGCAAAAGCTCAGAAGAAAAGTCTTTGTTAAGAAAGCAAGCCATAGAGTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CCA 90 bp | AATGAACAGTTTACAAATTCTCCAGCGTTAGTGTATTCCCTTTTATTTGTCCAGAAATTGCAAATGTCTTaGTCATTCCCATCACAAACA | + |
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Preference number: 4 (lower is better) Translates to: NEQFTNSPALVYSLLFVQKLQMS*SFPSQT Trigger: TGTTTGTGATGGGAATGACCAAGACATTTGCAATTT...CTGGACAAATAAAAGGGAATACACTAACGCTGGAGAATTTGTAAACTGTTCATT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR CAA 90 bp | TCTCCAGCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGGGCTCCTGTGTCTCCTaGCACTTCGATGTCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPALVYSLLFVQTENFALGSCVS*HFDVSV Trigger: GACAGAGACATCGAAGTGCAAGGAGACACAGGAGCC...CAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGCTGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS TCA 90 bp | GAAAGGCTCCTGTGTCTCCTTGCACTTCGATGTCTCTGTCTTGTATaGTGCCTCTGGTTCAGTTGCAGACAAAATGCTACCTTTGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: ERLLCLLALRCLCLV*CLWFSCRQNATFVF Trigger: GAAAACAAAGGTAGCATTTTGTCTGCAACTGAACCAGAGGCATCATACAAGACAGAGACATCGAAGTGCAAGGAGACACAGGAGCCTTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029502.14 ENSMUST00000106723.2 |
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| CDS CCA 90 bp | AGAGCCTGTGTAAGTCTGTGTGTAATCATATATCCAGCCTGCTATTaGTGGTCCAGAAAGTACAGCTATCCCGGCAAAGAAACTGGCATA | + |
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Preference number: 5 (lower is better) Translates to: RACVSLCVIIYPACY*WSRKYSYPGKETGI Trigger: TATGCCAGTTTCTTTGCCGGGATAGCTGTACTTTCTGGACCACCAATAGCAGGCTGGATATATGATTACACACAGACTTACACAGGCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CAA 90 bp | CCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGCCATCTCGCTTGTCTTCCATTGTCAGAATTGTTGTTaGATTGGCTGTGGATGGGTC | + |
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Preference number: 5 (lower is better) Translates to: PFICPDRELCSAISLVFHCQNCC*IGCGWV Trigger: GACCCATCCACAGCCAATCAAACAACAATTCTGACA...ATGGAAGACAAGCGAGATGGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR CAA 90 bp | AAGCTGGCTGGGTGGTGTGGTTGGAGGGAAATTAACCACCTGATAATGAACAGTTCAATGTCAGAATTGTaGTTTGATTGGCTGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: KLAGWCGWREINHLIMNSSMSEL*FDWLWM Trigger: CATCCACAGCCAATCAAACAACAATTCTGACATTGA...ACTGTTCATTATCAGGTGGTTAATTTCCCTCCAACCACACCACCCAGCCAGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS CCA 90 bp | GCATCCATTACGTCAATCCCAAGTGTTTTTGCTCTGGCTACTAGGTaGAAAGTGGGAATGAAATATGCTAATTGGCTCAGGAGAAAAGAC | + |
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Preference number: 5 (lower is better) Translates to: ASITSIPSVFALATR*KVGMKYANWLRRKD Trigger: GTCTTTTCTCCTGAGCCAATTAGCATATTTCATTCCCACTTTCCACCTAGTAGCCAGAGCAAAAACACTTGGGATTGACGTAATGGATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029502.14 ENSMUST00000106723.2 |
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| CDS-3UTR CAA 90 bp | TCTGATTTTCATTTAATAGTAAAGGAGCTGCTTCAATGGATTCAGTTTGTAGCCGGCTCCTGTGTCTCCTaGCACTTCGATGTCTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: SDFHLIVKELLQWIQFVAGSCVS*HFDVSV Trigger: GACAGAGACATCGAAGTGCAAGGAGACACAGGAGCC...GGCTACAAACTGAATCCATTGAAGCAGCTCCTTTACTATTAAATGAAAATCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CAA 90 bp | AGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTCTGCCATCTCGCTTGAGTTACATCTGCTATaGGTGGTCCAGAAAGTACAG | + |
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Preference number: 5 (lower is better) Translates to: SVFPFICPDRELCSAISLELHLL*VVQKVQ Trigger: CTGTACTTTCTGGACCACCAATAGCAGATGTAACTC...AAGCGAGATGGCAGAGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR CAA 90 bp | ATTCCTGGCAGTGCTAAGAAAGTAGGAAGGAATCTTAAAAACTCTATGGCTTGCATGCCTCTGGTTCAGTaGCAGACAAAATGCTACCTT | + |
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Preference number: 5 (lower is better) Translates to: IPGSAKKVGRNLKNSMACMPLVQ*QTKCYL Trigger: AAGGTAGCATTTTGTCTGCAACTGAACCAGAGGCAT...GCAAGCCATAGAGTTTTTAAGATTCCTTCCTACTTTCTTAGCACTGCCAGGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CAA 90 bp | TTATTACTCATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGATGTCAGAATTGTTGTTaGATTGGCTGTGGATGGGTC | + |
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Preference number: 5 (lower is better) Translates to: LLLIYYSFHQLTFLAVLRCQNCC*IGCGWV Trigger: GACCCATCCACAGCCAATCAAACAACAATTCTGACA...TCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATGAGTAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CAA 90 bp | AATTCTCCAGCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCTATGCCTCTGGTTCAGTaGCAGACAAAATGCTACCTT | + |
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Preference number: 5 (lower is better) Translates to: NSPALVYSLLFVQTENFAMPLVQ*QTKCYL Trigger: AAGGTAGCATTTTGTCTGCAACTGAACCAGAGGCAT...AGCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGCTGGAGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS CCA 90 bp | ATGCTACCTTTGTTTTCAATGTCAGAATTGTTGTTTGATTGGCTGTaGATGGGTCTTAAGAGCATGCTGGAAGGCACCAAGTTCAATATA | + |
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Preference number: 5 (lower is better) Translates to: MLPLFSMSELLFDWL*MGLKSMLEGTKFNI Trigger: TATATTGAACTTGGTGCCTTCCAGCATGCTCTTAAGACCCATCCACAGCCAATCAAACAACAATTCTGACATTGAAAACAAAGGTAGCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029502.14 ENSMUST00000106723.2 |
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| CDS-3UTR CAA 90 bp | TTATTACTCATTTATTACTCCTTCCACCAGTTGACATTCCTGGCAGTGCTAAGACTTCTTGATCCAATTTaGATCAGCAATCCATCCAGA | + |
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Preference number: 5 (lower is better) Translates to: LLLIYYSFHQLTFLAVLRLLDPI*ISNPSR Trigger: TCTGGATGGATTGCTGATCAAAATTGGATCAAGAAG...TCTTAGCACTGCCAGGAATGTCAACTGGTGGAAGGAGTAATAAATGAGTAATAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CAA 90 bp | AAATTCTCCAGCGTTAGTGTATTCCCTTTTATTTGTCCAGACAGAGAACTTTGCCTTCTTGATCCAATTTaGATCAGCAATCCATCCAGA | + |
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Preference number: 5 (lower is better) Translates to: KFSSVSVFPFICPDRELCLLDPI*ISNPSR Trigger: TCTGGATGGATTGCTGATCAAAATTGGATCAAGAAG...GCAAAGTTCTCTGTCTGGACAAATAAAAGGGAATACACTAACGCTGGAGAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS-3UTR CAA 90 bp | TCTGATTTTCATTTAATAGTAAAGGAGCTGCTTCAATGGATTCAGTTTGTAGCCTCAATGTCAGAATTGTaGTTTGATTGGCTGTGGATG | + |
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Preference number: 5 (lower is better) Translates to: SDFHLIVKELLQWIQFVASMSEL*FDWLWM Trigger: CATCCACAGCCAATCAAACAACAATTCTGACATTGA...GGCTACAAACTGAATCCATTGAAGCAGCTCCTTTACTATTAAATGAAAATCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS-3UTR CAA 90 bp | AACTCTATGGCTTGCTTTCTTAACAAAGACTTTTCTTCTGAGCTTTTGCTTACATTTTCAATGTCAGAATaGTTGTTTGATTGGCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: NSMACFLNKDFSSELLLTFSMSE*LFDWLW Trigger: CCACAGCCAATCAAACAACAATTCTGACATTGAAAA...TGTAAGCAAAAGCTCAGAAGAAAAGTCTTTGTTAAGAAAGCAAGCCATAGAGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS CAA 90 bp | TCATGTGCATTAGGTAAGTGGTCCACCCATGAGTTACATCTGCTATaGGTGGTCCAGAAAGTACAGCTATCCCGGCAAAGAAACTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: SCALGKWSTHELHLL*VVQKVQLSRQRNWH Trigger: ATGCCAGTTTCTTTGCCGGGATAGCTGTACTTTCTGGACCACCAATAGCAGATGTAACTCATGGGTGGACCACTTACCTAATGCACATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS TCA 72 bp | CTGTGTCTCCTTGCACTTCGATGTCTCTGTCTTGTATaGTGCCTCTGGTTCAGTTGCAGACAAAATGCTACC | + |
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Preference number: 6 (lower is better) Translates to: LCLLALRCLCLV*CLWFSCRQNAT Trigger: GGTAGCATTTTGTCTGCAACTGAACCAGAGGCATCATACAAGACAGAGACATCGAAGTGCAAGGAGACACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029502.14 ENSMUST00000106723.2 |
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| CDS CAA 72 bp | TTAGGTAAGTGGTCCACCCATGAGTTACATCTGCTATaGGTGGTCCAGAAAGTACAGCTATCCCGGCAAAGA | + |
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Preference number: 6 (lower is better) Translates to: LGKWSTHELHLL*VVQKVQLSRQR Trigger: TCTTTGCCGGGATAGCTGTACTTTCTGGACCACCAATAGCAGATGTAACTCATGGGTGGACCACTTACCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106723.2 |
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| CDS CCA 72 bp | ACGTCAATCCCAAGTGTTTTTGCTCTGGCTACTAGGTaGAAAGTGGGAATGAAATATGCTAATTGGCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: TSIPSVFALATR*KVGMKYANWLR Trigger: CCTGAGCCAATTAGCATATTTCATTCCCACTTTCCACCTAGTAGCCAGAGCAAAAACACTTGGGATTGACGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029502.14 ENSMUST00000106723.2 |
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| CDS CCA 72 bp | GTAAGTCTGTGTGTAATCATATATCCAGCCTGCTATTaGTGGTCCAGAAAGTACAGCTATCCCGGCAAAGAA | + |
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Preference number: 6 (lower is better) Translates to: VSLCVIIYPACY*WSRKYSYPGKE Trigger: TTCTTTGCCGGGATAGCTGTACTTTCTGGACCACCAATAGCAGGCTGGATATATGATTACACACAGACTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029502.14 |
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| CDS CAA 72 bp | ATAGTACTGTCTTTGATGAAAGGCTCCTGTGTCTCCTaGCACTTCGATGTCTCTGTCTTGTATGATGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: IVLSLMKGSCVS*HFDVSVLYDAS Trigger: AGAGGCATCATACAAGACAGAGACATCGAAGTGCAAGGAGACACAGGAGCCTTTCATCAAAGACAGTACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029502.14 ENSMUST00000106723.2 |
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| CDS CAA 90 bp | GTTAAGGTTGTGGTAGGTTGTTCAGATTTCTTCATAGTACTGTCTTaGATGAAAGGCTCCTGTGTCTCCTTGCACTTCGATGTCTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VKVVVGCSDFFIVLS*MKGSCVSLHFDVSV Trigger: GACAGAGACATCGAAGTGCAAGGAGACACAGGAGCCTTTCATCAAAGACAGTACTATGAAGAAATCTGAACAACCTACCACAACCTTAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029502.14 ENSMUST00000106723.2 |
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| CDS CCA 72 bp | TTTCAATGTCAGAATTGTTGTTTGATTGGCTGTGGATaGGTCTTAAGAGCATGCTGGAAGGCACCAAGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: FQCQNCCLIGCG*VLRACWKAPSS Trigger: TGAACTTGGTGCCTTCCAGCATGCTCTTAAGACCCATCCACAGCCAATCAAACAACAATTCTGACATTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029502.14 ENSMUST00000106723.2 |
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| CDS CAA 90 bp | CCCATTCCAGAACGGGCAATTGCTGTAGAAAGGCCCAATCGTTTTTaGAAATATTTGGTAATTACCACAGCAGCTACTTGGTACAAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: PIPERAIAVERPNRF*KYLVITTAATWYKK Trigger: TTTCTTGTACCAAGTAGCTGCTGTGGTAATTACCAAATATTTCAAAAAACGATTGGGCCTTTCTACAGCAATTGCCCGTTCTGGAATGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029502.14 ENSMUST00000106723.2 |
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| CDS CAA 90 bp | GAAAGTACAGCTATCCCGGCAAAGAAACTGGCATATCCCAAAAACTaGTGTACTCTAGAATTCTTAGATAGGTCAACCAATACTGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ESTAIPAKKLAYPKN*CTLEFLDRSTNTGS Trigger: ACTGCCAGTATTGGTTGACCTATCTAAGAATTCTAGAGTACACAAGTTTTTGGGATATGCCAGTTTCTTTGCCGGGATAGCTGTACTTTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029502.14 ENSMUST00000106723.2 |
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| CDS CAA 90 bp | CAGAATGAGGTAAGACTTGTGGTATTGATACTTCTTGATCCAATTTaGATCAGCAATCCATCCAGAAATGAGCTGACTGACTGTCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QNEVRLVVLILLDPI*ISNPSRNELTDCLS Trigger: ACTGAGACAGTCAGTCAGCTCATTTCTGGATGGATTGCTGATCAAAATTGGATCAAGAAGTATCAATACCACAAGTCTTACCTCATTCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029502.14 ENSMUST00000106723.2 |
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