Pregenerated sensors for SLC16A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025161Ensembl transcript IDs: ENSMUST00000070653.13, ENSMUST00000100130.10, ENSMUST00000129473.8, ENSMUST00000154187.8, ENSMUST00000168579.8
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGCAGGGACATGGCGTCTCTCCGGCTGCACGCGGCCCGCCAAGGTaGCCGCTGCCGACCCCAGCGCCCACGACGTACCACCTACTGAGG | + |
|
Preference number: 1 (lower is better) Translates to: EQGHGVSPAARGPPR*PLPTPAPTTYHLLR Trigger: CCTCAGTAGGTGGTACGTCGTGGGCGCTGGGGTCGGCAGCGGGCACCTTGGCGGGCCGCGTGCAGCCGGAGAGACGCCATGTCCCTGCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR GCA 90 bp | CCTCCTTTTCCTTGCAGAGGAGCAGGGACATGGCGTCTCTCCGGCTaGACGCGGCCCGCCAAGGTGCCCGCTGCCGACCCCAGCGCCCAC | + |
|
Preference number: 1 (lower is better) Translates to: PPFPCRGAGTWRLSG*TRPAKVPAADPSAH Trigger: GTGGGCGCTGGGGTCGGCAGCGGGCACCTTGGCGGGCCGCGTGCAGCCGGAGAGACGCCATGTCCCTGCTCCTCTGCAAGGAAAAGGAGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR CCA 90 bp | AGATATGAGCACTCGCCTCCTTTTCCTTGCAGAGGAGCAGGGACATaGCGTCTCTCCGGCTGCACGCGGCCCGCCAAGGTGCCCGCTGCC | + |
|
Preference number: 1 (lower is better) Translates to: RYEHSPPFPCRGAGT*RLSGCTRPAKVPAA Trigger: GGCAGCGGGCACCTTGGCGGGCCGCGTGCAGCCGGAGAGACGCCATGTCCCTGCTCCTCTGCAAGGAAAAGGAGGCGAGTGCTCATATCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR TCA 90 bp | GCAGGGCCAGACCCAACATGGGGCATGGGAGGCTGGGCCCAGATATaGGCACTCGCCTCCTTTTCCTTGCAGAGGAGCAGGGACATGGCG | + |
|
Preference number: 1 (lower is better) Translates to: AGPDPTWGMGGWAQI*ALASFSLQRSRDMA Trigger: CGCCATGTCCCTGCTCCTCTGCAAGGAAAAGGAGGCGAGTGCTCATATCTGGGCCCAGCCTCCCATGCCCCATGTTGGGTCTGGCCCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR TCA 90 bp | CCTCCTAGTACAGAGAACAGACCAGATGGGAGAGGCATCCCAGAGTaGGCAGGGCCAGACCCAACATGGGGCATGGGAGGCTGGGCCCAG | + |
|
Preference number: 1 (lower is better) Translates to: PPSTENRPDGRGIPE*AGPDPTWGMGGWAQ Trigger: CTGGGCCCAGCCTCCCATGCCCCATGTTGGGTCTGGCCCTGCTCACTCTGGGATGCCTCTCCCATCTGGTCTGTTCTCTGTACTAGGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR CCA 90 bp | GGAGAGGCATCCCAGAGTGAGCAGGGCCAGACCCAACATGGGGCATaGGAGGCTGGGCCCAGATATGAGCACTCGCCTCCTTTTCCTTGC | + |
|
Preference number: 1 (lower is better) Translates to: GEASQSEQGQTQHGA*EAGPRYEHSPPFPC Trigger: GCAAGGAAAAGGAGGCGAGTGCTCATATCTGGGCCCAGCCTCCCATGCCCCATGTTGGGTCTGGCCCTGCTCACTCTGGGATGCCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR CCA 90 bp | AGCCACAGGCTGCTTGGGCTCAGCAGGCTGGGTCCCTGGTTTAGGTaGCTGATAACTATGGGGCTTCCTTGGCTTCACCGCAGATCCACT | + |
|
Preference number: 1 (lower is better) Translates to: SHRLLGLSRLGPWFR*LITMGLPWLHRRST Trigger: AGTGGATCTGCGGTGAAGCCAAGGAAGCCCCATAGTTATCAGCCACCTAAACCAGGGACCCAGCCTGCTGAGCCCAAGCAGCCTGTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR GCA 90 bp | GGAAGACCCTGCAGGCAGTGTCCACCTGCCAGCCTGTCCCAGCCCTaGCCTCTGATTAAAGTCGTGTTGTCTCCTAAGTGTGGGTTTCTA | + |
|
Preference number: 1 (lower is better) Translates to: GRPCRQCPPASLSQP*PLIKVVLSPKCGFL Trigger: TAGAAACCCACACTTAGGAGACAACACGACTTTAATCAGAGGGCAGGGCTGGGACAGGCTGGCAGGTGGACACTGCCTGCAGGGTCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR GCA 90 bp | ACGCAGAGCAGTGATGTGGAGAGGCCCAGTGCCTCTGCACAAGAATaGTACCCACTTATCACCACTTTGCCTCTGGGGCTCGGCCTATCT | + |
|
Preference number: 1 (lower is better) Translates to: TQSSDVERPSASAQE*YPLITTLPLGLGLS Trigger: AGATAGGCCGAGCCCCAGAGGCAAAGTGGTGATAAGTGGGTAGCATTCTTGTGCAGAGGCACTGGGCCTCTCCACATCACTGCTCTGCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR CCA 90 bp | CTCTTCCCCTGGACCTTTGCAGGCCCAGTTATAAGCAGGTCTAGATaGACAGGCCTCTCCATTCTCACTCAGGCTTGGGTCTTCACAGGA | + |
|
Preference number: 1 (lower is better) Translates to: LFPWTFAGPVISRSR*TGLSILTQAWVFTG Trigger: TCCTGTGAAGACCCAAGCCTGAGTGAGAATGGAGAGGCCTGTCCATCTAGACCTGCTTATAACTGGGCCTGCAAAGGTCCAGGGGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR CCA 90 bp | CAGCCACATCTTCACCTCCATGTGTTCTCTGCCAAGGATAGGGTATaGGGATTGGGGAAGAGACCAACAGGTGGGTCAGCAGTAGCCTGT | + |
|
Preference number: 1 (lower is better) Translates to: QPHLHLHVFSAKDRV*GLGKRPTGGSAVAC Trigger: ACAGGCTACTGCTGACCCACCTGTTGGTCTCTTCCCCAATCCCCATACCCTATCCTTGGCAGAGAACACATGGAGGTGAAGATGTGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR CCA 90 bp | ATGTCCTCAGCTGCTATAGGAGCAGTCACAGGCCTTAAGTCTTCCTaGCTTCTGGCATCATCTGCTTGGGTTGGTTGCCACCCTAGGAAC | + |
|
Preference number: 1 (lower is better) Translates to: MSSAAIGAVTGLKSS*LLASSAWVGCHPRN Trigger: GTTCCTAGGGTGGCAACCAACCCAAGCAGATGATGCCAGAAGCCAGGAAGACTTAAGGCCTGTGACTGCTCCTATAGCAGCTGAGGACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR GCA 90 bp | GGTGAGATTGGCAAATTAGACTCCCAGGATGCATGTGACTGCTGCTaGTATAAGCAGTGCCCACCAACTGACCTCCTAGTACAGAGAACA | + |
|
Preference number: 1 (lower is better) Translates to: GEIGKLDSQDACDCC*YKQCPPTDLLVQRT Trigger: TGTTCTCTGTACTAGGAGGTCAGTTGGTGGGCACTGCTTATAGCAGCAGCAGTCACATGCATCCTGGGAGTCTAATTTGCCAATCTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGGGGGCGGGGGAGCCACAGGCTGCTTGGGCTCAGCAGGCTGGGTCCCTGGTTAGATCCACTTTGGAATaGCGCGGTTCCCACCCCGCC | + |
|
Preference number: 2 (lower is better) Translates to: EGAGEPQAAWAQQAGSLVRSTLE*RGSHPA Trigger: GGCGGGGTGGGAACCGCGTCATTCCAAAGTGGATCT...AACCAGGGACCCAGCCTGCTGAGCCCAAGCAGCCTGTGGCTCCCCCGCCCCCTC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGGGGCGGGGGAGCCACAGGCTGCTTGGGCTCAGCAGGCTGGGTCCCTGGTTACCGCAGATCCACTTTaGAATGACGCGGTTCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: EGAGEPQAAWAQQAGSLVTADPL*NDAVPT Trigger: GGTGGGAACCGCGTCATTCCAAAGTGGATCTGCGGT...AACCAGGGACCCAGCCTGCTGAGCCCAAGCAGCCTGTGGCTCCCCCGCCCCCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR GCA 90 bp | CACAGGCTGCTTGGGCTCAGCAGGCTGGGTCCCTGGTTTAGGTGGCTGATAACTTCTGGACCTCTTCCCTaGTCCCTGCCCGCCCGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: HRLLGLSRLGPWFRWLITSGPLP*SLPARP Trigger: TGGCCGGGCGGGCAGGGAGCAGGGAAGAGGTCCAGA...AGTTATCAGCCACCTAAACCAGGGACCCAGCCTGCTGAGCCCAAGCAGCCTGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTGGGACTCAGGGTGAACAGACCACTGCCCAGAACCACACAGCTCCTAGAGACGGGGGAGCCACAGGCTaGTTGGGCTCAGCAGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: GGTQGEQTTAQNHTAPRDGGATG*LGSAGW Trigger: CCAGCCTGCTGAGCCCAAGCAGCCTGTGGCTCCCCC...GTCTCTAGGAGCTGTGTGGTTCTGGGCAGTGGTCTGTTCACCCTGAGTCCCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTGGGACTCAGGGTGAACAGACCACTGCCCAGAACCACACAGCTCCTAGAGACCTCCCCGCAAAACACTaGCCGGCTGACCAGGCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: GGTQGEQTTAQNHTAPRDLPAKH*PADQAA Trigger: GGCTGCCTGGTCAGCCGGTCAGTGTTTTGCGGGGAG...GTCTCTAGGAGCTGTGTGGTTCTGGGCAGTGGTCTGTTCACCCTGAGTCCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR GCA 90 bp | GGGGCATGGGAGGCTGGGCCCAGATATGAGCACTCGCCTCCTTTTCCTTGCAGAGATCAGGGAAGACCCTaGAGGCAGTGTCCACCTGCC | + |
|
Preference number: 2 (lower is better) Translates to: GAWEAGPRYEHSPPFPCRDQGRP*RQCPPA Trigger: GGCAGGTGGACACTGCCTGCAGGGTCTTCCCTGATC...TCTGCAAGGAAAAGGAGGCGAGTGCTCATATCTGGGCCCAGCCTCCCATGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR-3UTR GCA 90 bp | GAACAGACCAGATGGGAGAGGCATCCCAGAGTGAGCAGGGCCAGACCCAACATGCCCATGGCCTCCAAATaGCACCCAGGCACCCCTCTC | + |
|
Preference number: 2 (lower is better) Translates to: EQTRWERHPRVSRARPNMPMASK*HPGTPL Trigger: GAGAGGGGTGCCTGGGTGGCATTTGGAGGCCATGGG...CATGTTGGGTCTGGCCCTGCTCACTCTGGGATGCCTCTCCCATCTGGTCTGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCTTGATGCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGGAGCCACAGGCTGCTTaGGCTCAGCAGGCTGGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: PLDAPPTGRSISAFSGRREPQAA*AQQAGS Trigger: GGACCCAGCCTGCTGAGCCCAAGCAGCCTGTGGCTC...CCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGCATCAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR CCA 90 bp | GAACAGACCAGATGGGAGAGGCATCCCAGAGTGAGCAGGGCCAGACCCAACATGAGAGGAGCAGGGACATaGCGTCTCTCCGGCTGCACG | + |
|
Preference number: 2 (lower is better) Translates to: EQTRWERHPRVSRARPNMRGAGT*RLSGCT Trigger: CGTGCAGCCGGAGAGACGCCATGTCCCTGCTCCTCT...CATGTTGGGTCTGGCCCTGCTCACTCTGGGATGCCTCTCCCATCTGGTCTGTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR-3UTR TCA 90 bp | TATGGGGCTTCCTTGGCTTCACCGCAGATCCACTTTGGAATGACGCGGTTCCCACTCCCCGCAAAACACTaGCCGGCTGACCAGGCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: YGASLASPQIHFGMTRFPLPAKH*PADQAA Trigger: GGCTGCCTGGTCAGCCGGTCAGTGTTTTGCGGGGAG...TGGGAACCGCGTCATTCCAAAGTGGATCTGCGGTGAAGCCAAGGAAGCCCCATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAAAGGGTGGGACTCAGGGTGAACAGACCACTGCCCAGAACCACACAGCTCCTAGATCCACTTTGGAATaGCGCGGTTCCCACCCCGCC | + |
|
Preference number: 2 (lower is better) Translates to: TKGGTQGEQTTAQNHTAPRSTLE*RGSHPA Trigger: GGCGGGGTGGGAACCGCGTCATTCCAAAGTGGATCT...AGGAGCTGTGTGGTTCTGGGCAGTGGTCTGTTCACCCTGAGTCCCACCCTTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR GCA 90 bp | GATGCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTGGGGGAGCCACAGGCTaGTTGGGCTCAGCAGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: DAPPTGRSISAFSGRRISGGATG*LGSAGW Trigger: CCAGCCTGCTGAGCCCAAGCAGCCTGTGGCTCCCCC...AGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGCATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCTTGATGCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGTTGGGCTCAGCAGGCTaGGTCCCTGGTTTAGGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: PLDAPPTGRSISAFSGRRLGSAG*VPGLGG Trigger: GCCACCTAAACCAGGGACCCAGCCTGCTGAGCCCAA...CCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGCATCAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGCAGAGAATGTTACAGCAGGCAGACCTGGAAGAGCTAATGAGGGCCAGAACGAGCCACAGGCTGCTTaGGCTCAGCAGGCTGGGTCC | + |
|
Preference number: 2 (lower is better) Translates to: AAENVTAGRPGRANEGQNEPQAA*AQQAGS Trigger: GGACCCAGCCTGCTGAGCCCAAGCAGCCTGTGGCTC...GTTCTGGCCCTCATTAGCTCTTCCAGGTCTGCCTGCTGTAACATTCTCTGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGCCCTGCCCTCTGATTAAAGTCGTGTTGTCTCCTAAGTGTGGGTTTCTAGGTTCTGGACCTCTTCCCTaGTCCCTGCCCGCCCGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: QPCPLIKVVLSPKCGFLGSGPLP*SLPARP Trigger: TGGCCGGGCGGGCAGGGAGCAGGGAAGAGGTCCAGA...ACCTAGAAACCCACACTTAGGAGACAACACGACTTTAATCAGAGGGCAGGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAAAGGGTGGGACTCAGGGTGAACAGACCACTGCCCAGAACCACACAGCTCCTAGCGTTGCCAGTCTCTaGACCTCTTCCCTGCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: TKGGTQGEQTTAQNHTAPSVASL*TSSLLP Trigger: AGGGAGCAGGGAAGAGGTCCAGAGACTGGCAACGCT...AGGAGCTGTGTGGTTCTGGGCAGTGGTCTGTTCACCCTGAGTCCCACCCTTTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR CCA 90 bp | GATGCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTGGTCCTTGGCCACAGTaGGGATGGAGGGTGGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: DAPPTGRSISAFSGRRISGPWPQ*GWRVGR Trigger: CCTCCCCACCCTCCATCCCCACTGTGGCCAAGGACC...AGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCCTTGATGCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGGGGTTTCTAGGTCCTTaGCCACAGTGGGGATGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: PLDAPPTGRSISAFSGRRGFLGP*PQWGWR Trigger: CCTCCATCCCCACTGTGGCCAAGGACCTAGAAACCC...CCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGCATCAAGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGTACAGATAGCTCTAGGAGCCTTCCCCTCCAAGATCCACTCTCCACAGCCGAGCTGAGCATGGGCTaGACAGAGGTCAGCAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: SSTDSSRSLPLQDPLSTAELSMG*TEVSRC Trigger: GCACCTGCTGACCTCTGTCCAGCCCATGCTCAGCTC...GGCTGTGGAGAGTGGATCTTGGAGGGGAAGGCTCCTAGAGCTATCTGTACTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR CAA 90 bp | AACAGACCACTGCCCAGAACCACACAGCTCCTAGAGACAGGCCCCTaGATGCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTA | + |
|
Preference number: 2 (lower is better) Translates to: NRPLPRTTQLLETGP*MLLPRAGLFLPSQV Trigger: TACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGCATCAAGGGGCCTGTCTCTAGGAGCTGTGTGGTTCTGGGCAGTGGTCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR TCA 90 bp | GAACAAACCCTAGGGGCAGCAGAGAATGTTACAGCAGGCAGACCTGGAAGAGCTAGATCCACTTTGGAATaGCGCGGTTCCCACCCCGCC | + |
|
Preference number: 2 (lower is better) Translates to: EQTLGAAENVTAGRPGRARSTLE*RGSHPA Trigger: GGCGGGGTGGGAACCGCGTCATTCCAAAGTGGATCT...AGCTCTTCCAGGTCTGCCTGCTGTAACATTCTCTGCTGCCCCTAGGGTTTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGTACAGATAGCTCTAGGAGCCTTCCCCTCCAAGATCCACTCTCCACAGCCAGCGTTGCCAGTCTCTaGACCTCTTCCCTGCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: SSTDSSRSLPLQDPLSTASVASL*TSSLLP Trigger: AGGGAGCAGGGAAGAGGTCCAGAGACTGGCAACGCT...GGCTGTGGAGAGTGGATCTTGGAGGGGAAGGCTCCTAGAGCTATCTGTACTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR-3UTR TCA 90 bp | GAGATTGGCAAATTAGACTCCCAGGATGCATGTGACTGCTGCTGCTATAAGCAGCTCCCCGCAAAACACTaGCCGGCTGACCAGGCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: EIGKLDSQDACDCCCYKQLPAKH*PADQAA Trigger: GGCTGCCTGGTCAGCCGGTCAGTGTTTTGCGGGGAG...CTGCTTATAGCAGCAGCAGTCACATGCATCCTGGGAGTCTAATTTGCCAATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCCACTTATCACCACTTTGCCTCTGGGGCTCGGCCTATCTTGAAGCCTTGCCAACCGCAGATCCACTTTaGAATGACGCGGTTCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: THLSPLCLWGSAYLEALPTADPL*NDAVPT Trigger: GGTGGGAACCGCGTCATTCCAAAGTGGATCTGCGGT...TGGCAAGGCTTCAAGATAGGCCGAGCCCCAGAGGCAAAGTGGTGATAAGTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAAAGGGTGGGACTCAGGGTGAACAGACCACTGCCCAGAACCACACAGCTCCTAGCAGGCTGGGTCCCTaGTTTAGGTGGCTGATAACT | + |
|
Preference number: 2 (lower is better) Translates to: TKGGTQGEQTTAQNHTAPSRLGP*FRWLIT Trigger: AGTTATCAGCCACCTAAACCAGGGACCCAGCCTGCT...AGGAGCTGTGTGGTTCTGGGCAGTGGTCTGTTCACCCTGAGTCCCACCCTTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTTGCCTCAAACTGGTTTGGGGATTATGGGTTATCTTAATCTCTTCCCCTGGATGGCGTCTCTCCGGCTaGACGCGGCCCGCCAAGGTG | + |
|
Preference number: 2 (lower is better) Translates to: ICLKLVWGLWVILISSPGWRLSG*TRPAKV Trigger: CACCTTGGCGGGCCGCGTGCAGCCGGAGAGACGCCA...TCCAGGGGAAGAGATTAAGATAACCCATAATCCCCAAACCAGTTTGAGGCAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTGACTGCTGCTGCTATAAGCAGTGCCCACCAACTGACCTCCTAGTACAGAGACACCCCTCTCTAGCATaGGGCTCCCTCCCTTGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: CDCCCYKQCPPTDLLVQRHPSLA*GSLPCY Trigger: ATAGCAAGGGAGGGAGCCCCATGCTAGAGAGGGGTG...TCTCTGTACTAGGAGGTCAGTTGGTGGGCACTGCTTATAGCAGCAGCAGTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR-3UTR TCA 90 bp | ATGCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTTAAAACACTGACCGGCTaGCCAGGCAGCCAAGAGCTG | + |
|
Preference number: 2 (lower is better) Translates to: MLLPRAGLFLPSQVEGFLKTLTG*PGSQEL Trigger: CAGCTCTTGGCTGCCTGGTCAGCCGGTCAGTGTTTT...AAGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCCTTGATGCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGTTAGGCAGAGATGGATaGCTGTCAATGGAGGAGACT | + |
|
Preference number: 2 (lower is better) Translates to: PLDAPPTGRSISAFSGRRLGRDG*LSMEET Trigger: AGTCTCCTCCATTGACAGTCATCCATCTCTGCCTAA...CCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGCATCAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTTGCCTCAAACTGGTTTGGGGATTATGGGTTATCTTAATCTCTTCCCCTGGATCTGGACCTCTTCCCTaGTCCCTGCCCGCCCGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: ICLKLVWGLWVILISSPGSGPLP*SLPARP Trigger: TGGCCGGGCGGGCAGGGAGCAGGGAAGAGGTCCAGA...TCCAGGGGAAGAGATTAAGATAACCCATAATCCCCAAACCAGTTTGAGGCAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCCCTGCCCTCTGATTAAAGTCGTGTTGTCTCCTAAGTGTGGGTTTCTAGGTAGCGTTGCCAGTCTCTaGACCTCTTCCCTGCTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: QPCPLIKVVLSPKCGFLGSVASL*TSSLLP Trigger: AGGGAGCAGGGAAGAGGTCCAGAGACTGGCAACGCT...ACCTAGAAACCCACACTTAGGAGACAACACGACTTTAATCAGAGGGCAGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGTGCCTCTGCACAAGAATGCTACCCACTTATCACCACTTTGCCTCTGGGGCTAGCAGGCTGGGTCCCTaGTTTAGGTGGCTGATAACT | + |
|
Preference number: 2 (lower is better) Translates to: QCLCTRMLPTYHHFASGASRLGP*FRWLIT Trigger: AGTTATCAGCCACCTAAACCAGGGACCCAGCCTGCT...AGCCCCAGAGGCAAAGTGGTGATAAGTGGGTAGCATTCTTGTGCAGAGGCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCCCCTTTCTTCCTGCTGTATGAATGCTGTGGCTATTGAACAAACCCTAGGGGGGTTTCTAGGTCCTTaGCCACAGTGGGGATGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LPLSSCCMNAVAIEQTLGGFLGP*PQWGWR Trigger: CCTCCATCCCCACTGTGGCCAAGGACCTAGAAACCC...CCCTAGGGTTTGTTCAATAGCCACAGCATTCATACAGCAGGAAGAAAGGGGGAG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR CCA 90 bp | AAAGTCGTGTTGTCTCCTAAGTGTGGGTTTCTAGGTCCTTGGCCACAGTGGGGAACTATGGGGCTTCCTTaGCTTCACCGCAGATCCACT | + |
|
Preference number: 2 (lower is better) Translates to: KVVLSPKCGFLGPWPQWGTMGLP*LHRRST Trigger: AGTGGATCTGCGGTGAAGCCAAGGAAGCCCCATAGT...TCCCCACTGTGGCCAAGGACCTAGAAACCCACACTTAGGAGACAACACGACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGCAGAGAATGTTACAGCAGGCAGACCTGGAAGAGCTAATGAGGGCCAGAACTTAGGCAGAGATGGATaGCTGTCAATGGAGGAGACT | + |
|
Preference number: 2 (lower is better) Translates to: AAENVTAGRPGRANEGQNLGRDG*LSMEET Trigger: AGTCTCCTCCATTGACAGTCATCCATCTCTGCCTAA...GTTCTGGCCCTCATTAGCTCTTCCAGGTCTGCCTGCTGTAACATTCTCTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGTGCCTCTGCACAAGAATGCTACCCACTTATCACCACTTTGCCTCTGGGGCTTTAGGCAGAGATGGATaGCTGTCAATGGAGGAGACT | + |
|
Preference number: 2 (lower is better) Translates to: QCLCTRMLPTYHHFASGALGRDG*LSMEET Trigger: AGTCTCCTCCATTGACAGTCATCCATCTCTGCCTAA...AGCCCCAGAGGCAAAGTGGTGATAAGTGGGTAGCATTCTTGTGCAGAGGCACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCAGGCTTGGGTCTTCACAGGATCCTAAATATAGCCTTCCCTTAGTCAGTTCAGCAGTGCCCACCAACTaGCCTCCTAGTACAGAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: LRLGSSQDPKYSLPLVSSAVPTN*PPSTEN Trigger: GTTCTCTGTACTAGGAGGTCAGTTGGTGGGCACTGC...TGAACTGACTAAGGGAAGGCTATATTTAGGATCCTGTGAAGACCCAAGCCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTGGCAAATTAGACTCCCAGGATGCATGTGACTGCTGCTGCTATAAGCAGTGCCTCCCCCTTTCTTCCTaGTGTATGAATGCTGTGGCT | + |
|
Preference number: 2 (lower is better) Translates to: IGKLDSQDACDCCCYKQCLPLSS*CMNAVA Trigger: AGCCACAGCATTCATACAGCAGGAAGAAAGGGGGAG...GCACTGCTTATAGCAGCAGCAGTCACATGCATCCTGGGAGTCTAATTTGCCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR CAA 90 bp | AAGAGACCAACAGGTGGGTCAGCAGTAGCCTGTAAACTAGCTCATTaGCCTCAAACTGGTTTGGGGATTATGGGTTATCTTAATCTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: KRPTGGSAVACKLAH*PQTGLGIMGYLNLF Trigger: GAAGAGATTAAGATAACCCATAATCCCCAAACCAGTTTGAGGCAAATGAGCTAGTTTACAGGCTACTGCTGACCCACCTGTTGGTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTTTGTCCCTTAGGCAGAAGCTGGTCCTGTTTGTaGAATAAATATGAGCGTTGC | + |
|
Preference number: 2 (lower is better) Translates to: AGLFLPSQVEGFLCPLGRSWSCL*NKYERC Trigger: GCAACGCTCATATTTATTTCACAAACAGGACCAGCT...TCTGCCTAAGGGACAAAGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTTGCCTCAAACTGGTTTGGGGATTATGGGTTATCTTAATCTCTTCCCCTGGAGAGGTCAGCAGGTGCTaGCCACATAGAGAAATTTAC | + |
|
Preference number: 2 (lower is better) Translates to: ICLKLVWGLWVILISSPGEVSRC*PHREIY Trigger: GTAAATTTCTCTATGTGGTCAGCACCTGCTGACCTC...TCCAGGGGAAGAGATTAAGATAACCCATAATCCCCAAACCAGTTTGAGGCAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR GCA 72 bp | CATGGCGTCTCTCCGGCTGCACGCGGCCCGCCAAGGTaGCCGCTGCCGACCCCAGCGCCCACGACGTACCAC | + |
|
Preference number: 3 (lower is better) Translates to: HGVSPAARGPPR*PLPTPAPTTYH Trigger: GTGGTACGTCGTGGGCGCTGGGGTCGGCAGCGGGCACCTTGGCGGGCCGCGTGCAGCCGGAGAGACGCCATG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR GCA 72 bp | CCTTGCAGAGGAGCAGGGACATGGCGTCTCTCCGGCTaGACGCGGCCCGCCAAGGTGCCCGCTGCCGACCCC | + |
|
Preference number: 3 (lower is better) Translates to: PCRGAGTWRLSG*TRPAKVPAADP Trigger: GGGGTCGGCAGCGGGCACCTTGGCGGGCCGCGTGCAGCCGGAGAGACGCCATGTCCCTGCTCCTCTGCAAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR CCA 72 bp | CACTCGCCTCCTTTTCCTTGCAGAGGAGCAGGGACATaGCGTCTCTCCGGCTGCACGCGGCCCGCCAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: HSPPFPCRGAGT*RLSGCTRPAKV Trigger: CACCTTGGCGGGCCGCGTGCAGCCGGAGAGACGCCATGTCCCTGCTCCTCTGCAAGGAAAAGGAGGCGAGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR TCA 72 bp | GGGCTTCCTTGGCTTCACCGCAGATCCACTTTGGAATaGCGCGGTTCCCACCCCGCCACCTCTCCCCGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: GLPWLHRRSTLE*RGSHPATSPRK Trigger: TTTGCGGGGAGAGGTGGCGGGGTGGGAACCGCGTCATTCCAAAGTGGATCTGCGGTGAAGCCAAGGAAGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR CCA 72 bp | CTATGGGGCTTCCTTGGCTTCACCGCAGATCCACTTTaGAATGACGCGGTTCCCACCCCGCCACCTCTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LWGFLGFTADPL*NDAVPTPPPLP Trigger: GGGGAGAGGTGGCGGGGTGGGAACCGCGTCATTCCAAAGTGGATCTGCGGTGAAGCCAAGGAAGCCCCATAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGGACTCAGGGTGAACAGACCACTGCCCAGAACCACACAGCTCCTAGAGACAACTATGGGGCTTCCTaGGCTTCACCGCAGATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GGTQGEQTTAQNHTAPRDNYGAS*ASPQIH Trigger: GTGGATCTGCGGTGAAGCCAAGGAAGCCCCATAGTT...GTCTCTAGGAGCTGTGTGGTTCTGGGCAGTGGTCTGTTCACCCTGAGTCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR TCA 72 bp | CCGATGGCCCCGCCCGCCCTCAGCTGGTCCTGTTTGTaGAATAAATATGAGCGTTGCCAGTCTCTGGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: PMAPPALSWSCL*NKYERCQSLDL Trigger: GAGGTCCAGAGACTGGCAACGCTCATATTTATTTCACAAACAGGACCAGCTGAGGGCGGGCGGGGCCATCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR GCA 72 bp | TGCAGGCAGTGTCCACCTGCCAGCCTGTCCCAGCCCTaGCCTCTGATTAAAGTCGTGTTGTCTCCTAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: CRQCPPASLSQP*PLIKVVLSPKC Trigger: ACACTTAGGAGACAACACGACTTTAATCAGAGGGCAGGGCTGGGACAGGCTGGCAGGTGGACACTGCCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR GCA 72 bp | AGTGATGTGGAGAGGCCCAGTGCCTCTGCACAAGAATaGTACCCACTTATCACCACTTTGCCTCTGGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SDVERPSASAQE*YPLITTLPLGL Trigger: GAGCCCCAGAGGCAAAGTGGTGATAAGTGGGTAGCATTCTTGTGCAGAGGCACTGGGCCTCTCCACATCACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR CCA 72 bp | GGCCTTAAGTCTTCCTGGCTTCTGGCATCATCTGCTTaGGTTGGTTGCCACCCTAGGAACCCCAGCAACCAT | + |
|
Preference number: 3 (lower is better) Translates to: GLKSSWLLASSA*VGCHPRNPSNH Trigger: ATGGTTGCTGGGGTTCCTAGGGTGGCAACCAACCCAAGCAGATGATGCCAGAAGCCAGGAAGACTTAAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTTTGTGGGTTTCTAGGTCCTaGGCCACAGTGGGGATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: APPTGRSISAFSGRRISLWVSRS*ATVGME Trigger: CTCCATCCCCACTGTGGCCAAGGACCTAGAAACCCA...CAAAGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR CCA 72 bp | TGGACCTTTGCAGGCCCAGTTATAAGCAGGTCTAGATaGACAGGCCTCTCCATTCTCACTCAGGCTTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: WTFAGPVISRSR*TGLSILTQAWV Trigger: GACCCAAGCCTGAGTGAGAATGGAGAGGCCTGTCCATCTAGACCTGCTTATAACTGGGCCTGCAAAGGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR CCA 72 bp | CTTCACCTCCATGTGTTCTCTGCCAAGGATAGGGTATaGGGATTGGGGAAGAGACCAACAGGTGGGTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: LHLHVFSAKDRV*GLGKRPTGGSA Trigger: TGCTGACCCACCTGTTGGTCTCTTCCCCAATCCCCATACCCTATCCTTGGCAGAGAACACATGGAGGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCCCCCTTTCTTCCTGCTGTATGAATGCTGTGGCTATTGAACAAACCCTAGGGTGGGTTTCTAGGTCCTaGGCCACAGTGGGGATGGAG | + |
|
Preference number: 3 (lower is better) Translates to: LPLSSCCMNAVAIEQTLGWVSRS*ATVGME Trigger: CTCCATCCCCACTGTGGCCAAGGACCTAGAAACCCA...CCCTAGGGTTTGTTCAATAGCCACAGCATTCATACAGCAGGAAGAAAGGGGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGGGTGGGACTCAGGGTGAACAGACCACTGCCCAGAACCACACAGCTCCTAGGTAGAAGGATTTCTTaGTCCCTTAGGCAGAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: QRVGLRVNRPLPRTTQLLGRRIS*SLRQRW Trigger: CCATCTCTGCCTAAGGGACAAAGAAATCCTTCTACC...TAGGAGCTGTGTGGTTCTGGGCAGTGGTCTGTTCACCCTGAGTCCCACCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR TCA 72 bp | CTTATCACCACTTTGCCTCTGGGGCTCGGCCTATCTTaGAGCCTTGCCATTGCCACTAGTCTGGTGAGATTG | + |
|
Preference number: 3 (lower is better) Translates to: LITTLPLGLGLS*SLAIATSLVRL Trigger: CAATCTCACCAGACTAGTGGCAATGGCAAGGCTTCAAGATAGGCCGAGCCCCAGAGGCAAAGTGGTGATAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR GCA 72 bp | TCCCAGGATGCATGTGACTGCTGCTGCTATAAGCAGTaGCCACCAACTGACCTCCTAGTACAGAGAACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SQDACDCCCYKQ*PPTDLLVQRTD Trigger: GTCTGTTCTCTGTACTAGGAGGTCAGTTGGTGGGCACTGCTTATAGCAGCAGCAGTCACATGCATCCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR-3UTR CAA 90 bp | GAACAAACCCTAGGGGCAGCAGAGAATGTTACAGCAGGCAGACCTGGAAGAGCTGGTAGAAGGATTTCTTaGTCCCTTAGGCAGAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: EQTLGAAENVTAGRPGRAGRRIS*SLRQRW Trigger: CCATCTCTGCCTAAGGGACAAAGAAATCCTTCTACC...AGCTCTTCCAGGTCTGCCTGCTGTAACATTCTCTGCTGCCCCTAGGGTTTGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR TCA 72 bp | GTAGAAGGATTTCTTTGTCCCTTAGGCAGAGATGGATaGCTGTCAATGGAGGAGACTAGGGCTGAGGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: VEGFLCPLGRDG*LSMEETRAEGR Trigger: CCTCCCCTCAGCCCTAGTCTCCTCCATTGACAGTCATCCATCTCTGCCTAAGGGACAAAGAAATCCTTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR GCA 72 bp | GGCAAATTAGACTCCCAGGATGCATGTGACTGCTGCTaGTATAAGCAGTGCCCACCAACTGACCTCCTAGTA | + |
|
Preference number: 3 (lower is better) Translates to: GKLDSQDACDCC*YKQCPPTDLLV Trigger: TACTAGGAGGTCAGTTGGTGGGCACTGCTTATAGCAGCAGCAGTCACATGCATCCTGGGAGTCTAATTTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR CCA 72 bp | GCAAGGTTGAGAAACACTGAGCCAGGAGATGAAATATaGGTACAGGCTCTGTCTACATGGGCTCCTTCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: ARLRNTEPGDEI*VQALSTWAPSP Trigger: TGGGGAAGGAGCCCATGTAGACAGAGCCTGTACCCATATTTCATCTCCTGGCTCAGTGTTTCTCAACCTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR GCA 72 bp | TTACTAGAAAGTGATCCTGATCATCTTATCTGTGATTaGCCATGTGCAGGAAACCTGACCCATTTTTGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LLESDPDHLICD*PCAGNLTHFCH Trigger: ATGGCAAAAATGGGTCAGGTTTCCTGCACATGGGCAATCACAGATAAGATGATCAGGATCACTTTCTAGTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| CDS-3UTR TCA 90 bp | GACCGGCTGACCAGGCAGCCAAGAGCTGAGCCGATGGCCCCGCCCGCCCTCAGCGGCCACCCACAAGCATaGCAGGCCGGCAGCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: DRLTRQPRAEPMAPPALSGHPQA*QAGSQS Trigger: GCTTTGGCTGCCGGCCTGTCATGCTTGTGGGTGGCC...GCTGAGGGCGGGCGGGGCCATCGGCTCAGCTCTTGGCTGCCTGGTCAGCCGGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR TCA 90 bp | ACCAGGCAGCCAAGAGCTGAGCCGATGGCCCCGCCCGCCCTCAGCTGGTCCTGTGGCCACCCACAAGCATaGCAGGCCGGCAGCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TRQPRAEPMAPPALSWSCGHPQA*QAGSQS Trigger: GCTTTGGCTGCCGGCCTGTCATGCTTGTGGGTGGCC...ACAGGACCAGCTGAGGGCGGGCGGGGCCATCGGCTCAGCTCTTGGCTGCCTGGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | GAGGGGGCGGGGGAGCCACAGGCTGCTTGGGCTCAGCAGGCTGGGTCCCTGGTTTCTGCCTTCAGGAAGTaGTCCACCTCCCTCGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: EGAGEPQAAWAQQAGSLVSAFRK*STSLES Trigger: GGACTCGAGGGAGGTGGAGCACTTCCTGAAGGCAGA...AACCAGGGACCCAGCCTGCTGAGCCCAAGCAGCCTGTGGCTCCCCCGCCCCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGGGCGGGGGAGCCACAGGCTGCTTGGGCTCAGCAGGCTGGGTCCCTGGTTGCACTGGAGAACTTCTaGGTGCCCACGATAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: EGAGEPQAAWAQQAGSLVALENF*VPTIAM Trigger: CATGGCTATCGTGGGCACTCAGAAGTTCTCCAGTGC...AACCAGGGACCCAGCCTGCTGAGCCCAAGCAGCCTGTGGCTCCCCCGCCCCCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CCA 90 bp | GACCGGCTGACCAGGCAGCCAAGAGCTGAGCCGATGGCCCCGCCCGCCCTCAGCGCAGCACGAGACCAATaGCACTGGAGAACTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DRLTRQPRAEPMAPPALSAARDQ*HWRTSE Trigger: CTCAGAAGTTCTCCAGTGCCATTGGTCTCGTGCTGC...GCTGAGGGCGGGCGGGGCCATCGGCTCAGCTCTTGGCTGCCTGGTCAGCCGGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | AGCCAAGAGCTGAGCCGATGGCCCCGCCCGCCCTCAGCTGGTCCTGTTTGTGAAGAACACTGGGCTGCCTaGCGCTGCCAACCCATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQELSRWPRPPSAGPVCEEHWAA*RCQPIG Trigger: GCCAATGGGTTGGCAGCGGCAGGCAGCCCAGTGTTC...TTCACAAACAGGACCAGCTGAGGGCGGGCGGGGCCATCGGCTCAGCTCTTGGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR TCA 90 bp | AGCCGATGGCCCCGCCCGCCCTCAGCTGGTCCTGTTTGTGAAATAAATATGAGCGGCCACCCACAAGCATaGCAGGCCGGCAGCCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRWPRPPSAGPVCEINMSGHPQA*QAGSQS Trigger: GCTTTGGCTGCCGGCCTGTCATGCTTGTGGGTGGCC...GCTCATATTTATTTCACAAACAGGACCAGCTGAGGGCGGGCGGGGCCATCGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | CACAGGCTGCTTGGGCTCAGCAGGCTGGGTCCCTGGTTTAGGTGGCTGATAACTGAACACTGGGCTGCCTaGCGCTGCCAACCCATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HRLLGLSRLGPWFRWLITEHWAA*RCQPIG Trigger: GCCAATGGGTTGGCAGCGGCAGGCAGCCCAGTGTTC...AGTTATCAGCCACCTAAACCAGGGACCCAGCCTGCTGAGCCCAAGCAGCCTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGGCAGCCAAGAGCTGAGCCGATGGCCCCGCCCGCCCTCAGCTGGTCCTGTCTTGTAAACTTTGGTTaGATCCAGCAGCTTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TRQPRAEPMAPPALSWSCLVNFG*IQQLAS Trigger: GGAGGCAAGCTGCTGGATGCAACCAAAGTTTACAAG...ACAGGACCAGCTGAGGGCGGGCGGGGCCATCGGCTCAGCTCTTGGCTGCCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGGCAGCCAAGAGCTGAGCCGATGGCCCCGCCCGCCCTCAGCTGGTCCTGTATTTTTCTCAGGCTCTaGCTTCAGGAAGTGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRQPRAEPMAPPALSWSCIFLRL*LQEVLH Trigger: GTGGAGCACTTCCTGAAGGCAGAGCCTGAGAAAAAT...ACAGGACCAGCTGAGGGCGGGCGGGGCCATCGGCTCAGCTCTTGGCTGCCTGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | TCGCCTCCTTTTCCTTGCAGAGGAGCAGGGACATGGCGTCTCTCCGGCTGCACGCCCCAGTGGAGACAGTaGACAAAGGAACACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPPFPCRGAGTWRLSGCTPQWRQ*TKEHWA Trigger: AGCCCAGTGTTCCTTTGTGCACTGTCTCCACTGGGG...CGTGCAGCCGGAGAGACGCCATGTCCCTGCTCCTCTGCAAGGAAAAGGAGGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR CAA 72 bp | CTGCCCAGAACCACACAGCTCCTAGAGACAGGCCCCTaGATGCTCCTCCCACGGGCAGGTCTATTTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPRTTQLLETGP*MLLPRAGLFLP Trigger: AGGCAGAAATAGACCTGCCCGTGGGAGGAGCATCAAGGGGCCTGTCTCTAGGAGCTGTGTGGTTCTGGGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR TCA 90 bp | ACAAAGGGTGGGACTCAGGGTGAACAGACCACTGCCCAGAACCACACAGCTCCTAGAGTCCCAGCACCATaGTTGAGGCGGCCACGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TKGGTQGEQTTAQNHTAPRVPAP*LRRPRH Trigger: ATGCCGTGGCCGCCTCAATCATGGTGCTGGGACTCT...AGGAGCTGTGTGGTTCTGGGCAGTGGTCTGTTCACCCTGAGTCCCACCCTTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CCA 90 bp | ACAAAGGGTGGGACTCAGGGTGAACAGACCACTGCCCAGAACCACACAGCTCCTTCCACAGGGGGCTTGTaGAGCTTCTCCTCTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TKGGTQGEQTTAQNHTAPSTGGL*SFSSEA Trigger: GGCCTCAGAGGAGAAGCTCCACAAGCCCCCTGTGGA...AGGAGCTGTGTGGTTCTGGGCAGTGGTCTGTTCACCCTGAGTCCCACCCTTTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | ACTTATCACCACTTTGCCTCTGGGGCTCGGCCTATCTTGAAGCCTTGCCATTGCGAACACTGGGCTGCCTaGCGCTGCCAACCCATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TYHHFASGARPILKPCHCEHWAA*RCQPIG Trigger: GCCAATGGGTTGGCAGCGGCAGGCAGCCCAGTGTTC...GCAATGGCAAGGCTTCAAGATAGGCCGAGCCCCAGAGGCAAAGTGGTGATAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTTGATGCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGTCTGCCTTCAGGAAGTaGTCCACCTCCCTCGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLDAPPTGRSISAFSGRRSAFRK*STSLES Trigger: GGACTCGAGGGAGGTGGAGCACTTCCTGAAGGCAGA...CCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGCATCAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CCA 90 bp | GCAGATCCACTTTGGAATGACGCGGTTCCCACCCCGCCACCTCTCCCCGCAAAAATGATGAGGGAAGGCTaGAAGTTGAGAGCCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: ADPLWNDAVPTPPPLPAKMMREG*KLRARP Trigger: GGGTCTGGCTCTCAACTTCCAGCCTTCCCTCATCAT...TTTTGCGGGGAGAGGTGGCGGGGTGGGAACCGCGTCATTCCAAAGTGGATCTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGGGTGGGACTCAGGGTGAACAGACCACTGCCCAGAACCACACAGCTCCTAGCACTGGAGAACTTCTaGGTGCCCACGATAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QRVGLRVNRPLPRTTQLLALENF*VPTIAM Trigger: CATGGCTATCGTGGGCACTCAGAAGTTCTCCAGTGC...TAGGAGCTGTGTGGTTCTGGGCAGTGGTCTGTTCACCCTGAGTCCCACCCTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CCA 90 bp | GAACAGACCAGATGGGAGAGGCATCCCAGAGTGAGCAGGGCCAGACCCAACATGATGATGAGGGAAGGCTaGAAGTTGAGAGCCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: EQTRWERHPRVSRARPNMMMREG*KLRARP Trigger: GGGTCTGGCTCTCAACTTCCAGCCTTCCCTCATCAT...CATGTTGGGTCTGGCCCTGCTCACTCTGGGATGCCTCTCCCATCTGGTCTGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| CDS-3UTR CCA 90 bp | GAACAAACCCTAGGGGCAGCAGAGAATGTTACAGCAGGCAGACCTGGAAGAGCTGGCCACCGTAGTCAGTaGCTGTGGAGCCTGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EQTLGAAENVTAGRPGRAGHRSQ*LWSLSG Trigger: ACCTGACAGGCTCCACAGCCACTGACTACGGTGGCC...AGCTCTTCCAGGTCTGCCTGCTGTAACATTCTCTGCTGCCCCTAGGGTTTGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CCA 90 bp | ACTTATCACCACTTTGCCTCTGGGGCTCGGCCTATCTTGAAGCCTTGCCATTGCTCCACAGGGGGCTTGTaGAGCTTCTCCTCTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TYHHFASGARPILKPCHCSTGGL*SFSSEA Trigger: GGCCTCAGAGGAGAAGCTCCACAAGCCCCCTGTGGA...GCAATGGCAAGGCTTCAAGATAGGCCGAGCCCCAGAGGCAAAGTGGTGATAAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR CAA 72 bp | CACAGTGAACAGCTTATGCTATACTTCAGCTCGCCCTaGGGGGTTCCCCATGGCCTCCAAATGCCACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HSEQLMLYFSSP*GVPHGLQMPPR Trigger: CCTGGGTGGCATTTGGAGGCCATGGGGAACCCCCAAGGGCGAGCTGAAGTATAGCATAAGCTGTTCACTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | GAACAGACCAGATGGGAGAGGCATCCCAGAGTGAGCAGGGCCAGACCCAACATGGTAGTGCGCCCACCATaGCATATGAGATGCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EQTRWERHPRVSRARPNMVVRPP*HMRCQR Trigger: TCTTTGGCATCTCATATGGCATGGTGGGCGCACTAC...CATGTTGGGTCTGGCCCTGCTCACTCTGGGATGCCTCTCCCATCTGGTCTGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTGAGCCGATGGCCCCGCCCGCCCTCAGCTGGTCCTGTTTGTGAAATAAATTCTTCCTCTTCCCGATaGAGAAGAAGTTGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ELSRWPRPPSAGPVCEINSSSSR*RRSCPA Trigger: TGCTGGGCAACTTCTTCTGCATCGGGAAGAGGAAGA...ATTTATTTCACAAACAGGACCAGCTGAGGGCGGGCGGGGCCATCGGCTCAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | GCAGATCCACTTTGGAATGACGCGGTTCCCACCCCGCCACCTCTCCCCGCAAAAATTTTTCTCAGGCTCTaGCTTCAGGAAGTGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ADPLWNDAVPTPPPLPAKIFLRL*LQEVLH Trigger: GTGGAGCACTTCCTGAAGGCAGAGCCTGAGAAAAAT...TTTTGCGGGGAGAGGTGGCGGGGTGGGAACCGCGTCATTCCAAAGTGGATCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CCA 90 bp | AGCCGATGGCCCCGCCCGCCCTCAGCTGGTCCTGTTTGTGAAATAAATATGAGCATGATGAGGGAAGGCTaGAAGTTGAGAGCCAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: SRWPRPPSAGPVCEINMSMMREG*KLRARP Trigger: GGGTCTGGCTCTCAACTTCCAGCCTTCCCTCATCAT...GCTCATATTTATTTCACAAACAGGACCAGCTGAGGGCGGGCGGGGCCATCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGGGTGGGACTCAGGGTGAACAGACCACTGCCCAGAACCACACAGCTCCTACGAGACCAATGGCACTaGAGAACTTCTGAGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QRVGLRVNRPLPRTTQLLRDQWH*RTSECP Trigger: TGGGCACTCAGAAGTTCTCCAGTGCCATTGGTCTCG...TAGGAGCTGTGTGGTTCTGGGCAGTGGTCTGTTCACCCTGAGTCCCACCCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CCA 90 bp | GCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTTTGTCCACAGGGGGCTTGTaGAGCTTCTCCTCTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: APPTGRSISAFSGRRISLSTGGL*SFSSEA Trigger: GGCCTCAGAGGAGAAGCTCCACAAGCCCCCTGTGGA...CAAAGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR CAA 72 bp | CTCCATGTGTTCTCTGCCAAGGATAGGGTATGGGGATaGGGGAAGAGACCAACAGGTGGGTCAGCAGTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LHVFSAKDRVWG*GKRPTGGSAVA Trigger: GGCTACTGCTGACCCACCTGTTGGTCTCTTCCCCAATCCCCATACCCTATCCTTGGCAGAGAACACATGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTTAGAGTCCCAGCACCATaGTTGAGGCGGCCACGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: MLLPRAGLFLPSQVEGFLRVPAP*LRRPRH Trigger: ATGCCGTGGCCGCCTCAATCATGGTGCTGGGACTCT...AAGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTTGATGCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGTCTTCCTCTTCCCGATaGAGAAGAAGTTGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLDAPPTGRSISAFSGRRSSSSR*RRSCPA Trigger: TGCTGGGCAACTTCTTCTGCATCGGGAAGAGGAAGA...CCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGCATCAAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCAGCTGGTCCTGTTTGTGAAATAAATATGAGCGTTGCCAGTCTCTGGACCGGCCACCGTAGTCAGTaGCTGTGGAGCCTGTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PSAGPVCEINMSVASLWTGHRSQ*LWSLSG Trigger: ACCTGACAGGCTCCACAGCCACTGACTACGGTGGCC...GGTCCAGAGACTGGCAACGCTCATATTTATTTCACAAACAGGACCAGCTGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CCA 90 bp | TATGGGGCTTCCTTGGCTTCACCGCAGATCCACTTTGGAATGACGCGGTTCCCACGAGACCAATGGCACTaGAGAACTTCTGAGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: YGASLASPQIHFGMTRFPRDQWH*RTSECP Trigger: TGGGCACTCAGAAGTTCTCCAGTGCCATTGGTCTCG...TGGGAACCGCGTCATTCCAAAGTGGATCTGCGGTGAAGCCAAGGAAGCCCCATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR CAA 72 bp | AGCCTGTCCCAGCCCTGCCCTCTGATTAAAGTCGTGTaGTCTCCTAAGTGTGGGTTTCTAGGTCCTTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSQPCPLIKVV*SPKCGFLGPWP Trigger: TGGCCAAGGACCTAGAAACCCACACTTAGGAGACAACACGACTTTAATCAGAGGGCAGGGCTGGGACAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTTTCTGCCTTCAGGAAGTaGTCCACCTCCCTCGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MLLPRAGLFLPSQVEGFLSAFRK*STSLES Trigger: GGACTCGAGGGAGGTGGAGCACTTCCTGAAGGCAGA...AAGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR TCA 90 bp | TATGGGGCTTCCTTGGCTTCACCGCAGATCCACTTTGGAATGACGCGGTTCCCAAGAACATGGCAAAGCTaGAGAGGTAGACAGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: YGASLASPQIHFGMTRFPRTWQS*RGRQSR Trigger: CCTACTCTGTCTACCTCTTCAGCTTTGCCATGTTCT...TGGGAACCGCGTCATTCCAAAGTGGATCTGCGGTGAAGCCAAGGAAGCCCCATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR TCA 90 bp | CTCCCCCTTTCTTCCTGCTGTATGAATGCTGTGGCTATTGAACAAACCCTAGGGGCACTGGAGAACTTCTaGGTGCCCACGATAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: LPLSSCCMNAVAIEQTLGALENF*VPTIAM Trigger: CATGGCTATCGTGGGCACTCAGAAGTTCTCCAGTGC...CCCTAGGGTTTGTTCAATAGCCACAGCATTCATACAGCAGGAAGAAAGGGGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | ATGCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTTCCCCAGTGGAGACAGTaGACAAAGGAACACTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MLLPRAGLFLPSQVEGFLPQWRQ*TKEHWA Trigger: AGCCCAGTGTTCCTTTGTGCACTGTCTCCACTGGGG...AAGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CCA 90 bp | AAAGTCGTGTTGTCTCCTAAGTGTGGGTTTCTAGGTCCTTGGCCACAGTGGGGAGCAGCACGAGACCAATaGCACTGGAGAACTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KVVLSPKCGFLGPWPQWGAARDQ*HWRTSE Trigger: CTCAGAAGTTCTCCAGTGCCATTGGTCTCGTGCTGC...TCCCCACTGTGGCCAAGGACCTAGAAACCCACACTTAGGAGACAACACGACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR TCA 90 bp | GCAGCAGAGAATGTTACAGCAGGCAGACCTGGAAGAGCTAATGAGGGCCAGAACAGAACATGGCAAAGCTaGAGAGGTAGACAGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAENVTAGRPGRANEGQNRTWQS*RGRQSR Trigger: CCTACTCTGTCTACCTCTTCAGCTTTGCCATGTTCT...GTTCTGGCCCTCATTAGCTCTTCCAGGTCTGCCTGCTGTAACATTCTCTGCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | CGCCCGCCCTCAGCTGGTCCTGTTTGTGAAATAAATATGAGCGTTGCCAGTCTCCTTGTAAACTTTGGTTaGATCCAGCAGCTTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RPPSAGPVCEINMSVASLLVNFG*IQQLAS Trigger: GGAGGCAAGCTGCTGGATGCAACCAAAGTTTACAAG...GAGACTGGCAACGCTCATATTTATTTCACAAACAGGACCAGCTGAGGGCGGGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCAGCTGGTCCTGTTTGTGAAATAAATATGAGCGTTGCCAGTCTCTGGACCCGAGACCAATGGCACTaGAGAACTTCTGAGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PSAGPVCEINMSVASLWTRDQWH*RTSECP Trigger: TGGGCACTCAGAAGTTCTCCAGTGCCATTGGTCTCG...GGTCCAGAGACTGGCAACGCTCATATTTATTTCACAAACAGGACCAGCTGAGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR CAA 72 bp | TTAAGTCTTCCTGGCTTCTGGCATCATCTGCTTGGGTaGGTTGCCACCCTAGGAACCCCAGCAACCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLPGFWHHLLG*VATLGTPATIL Trigger: AAGTATGGTTGCTGGGGTTCCTAGGGTGGCAACCAACCCAAGCAGATGATGCCAGAAGCCAGGAAGACTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR CAA 72 bp | GTAAAGGTACTTAGGCTAGAGGTGGAAGGACCAGTCTaGGAGCTAGAACTGGGTGGACTGCACATCCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: VKVLRLEVEGPV*ELELGGLHIQE Trigger: CTCTTGGATGTGCAGTCCACCCAGTTCTAGCTCCAAGACTGGTCCTTCCACCTCTAGCCTAAGTACCTTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTTGATGCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGCCATGCCATATGAGATaGCAAAGAAGATGCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLDAPPTGRSISAFSGRRPCHMR*QRRCKR Trigger: TCTTTTGCATCTTCTTTGGCATCTCATATGGCATGG...CCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGCATCAAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCCTGCCCTCTGATTAAAGTCGTGTTGTCTCCTAAGTGTGGGTTTCTAGGTGTAGTGCGCCCACCATaGCATATGAGATGCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QPCPLIKVVLSPKCGFLGVVRPP*HMRCQR Trigger: TCTTTGGCATCTCATATGGCATGGTGGGCGCACTAC...ACCTAGAAACCCACACTTAGGAGACAACACGACTTTAATCAGAGGGCAGGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | CAGCCCTGCCCTCTGATTAAAGTCGTGTTGTCTCCTAAGTGTGGGTTTCTAGGTTCTTCCTCTTCCCGATaGAGAAGAAGTTGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPCPLIKVVLSPKCGFLGSSSSR*RRSCPA Trigger: TGCTGGGCAACTTCTTCTGCATCGGGAAGAGGAAGA...ACCTAGAAACCCACACTTAGGAGACAACACGACTTTAATCAGAGGGCAGGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | GCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTTTGATTTTTCTCAGGCTCTaGCTTCAGGAAGTGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: APPTGRSISAFSGRRISLIFLRL*LQEVLH Trigger: GTGGAGCACTTCCTGAAGGCAGAGCCTGAGAAAAAT...CAAAGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR TCA 90 bp | ATGCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTTAGAACATGGCAAAGCTaGAGAGGTAGACAGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: MLLPRAGLFLPSQVEGFLRTWQS*RGRQSR Trigger: CCTACTCTGTCTACCTCTTCAGCTTTGCCATGTTCT...AAGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCCCTTTCTTCCTGCTGTATGAATGCTGTGGCTATTGAACAAACCCTAGGGCTTGTAAACTTTGGTTaGATCCAGCAGCTTGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LPLSSCCMNAVAIEQTLGLVNFG*IQQLAS Trigger: GGAGGCAAGCTGCTGGATGCAACCAAAGTTTACAAG...CCCTAGGGTTTGTTCAATAGCCACAGCATTCATACAGCAGGAAGAAAGGGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTTTGTCCCTTAGGCAGAGCAGCACGAGACCAATaGCACTGGAGAACTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AGLFLPSQVEGFLCPLGRAARDQ*HWRTSE Trigger: CTCAGAAGTTCTCCAGTGCCATTGGTCTCGTGCTGC...TCTGCCTAAGGGACAAAGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTTTGTCCCTTAGGCAGAGTAGTGCGCCCACCATaGCATATGAGATGCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGLFLPSQVEGFLCPLGRVVRPP*HMRCQR Trigger: TCTTTGGCATCTCATATGGCATGGTGGGCGCACTAC...TCTGCCTAAGGGACAAAGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | CTCCCCCTTTCTTCCTGCTGTATGAATGCTGTGGCTATTGAACAAACCCTAGGGCCATGCCATATGAGATaGCAAAGAAGATGCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPLSSCCMNAVAIEQTLGPCHMR*QRRCKR Trigger: TCTTTTGCATCTTCTTTGGCATCTCATATGGCATGG...CCCTAGGGTTTGTTCAATAGCCACAGCATTCATACAGCAGGAAGAAAGGGGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR CAA 72 bp | ACAGGTGGGTCAGCAGTAGCCTGTAAACTAGCTCATTaGCCTCAAACTGGTTTGGGGATTATGGGTTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: TGGSAVACKLAH*PQTGLGIMGYL Trigger: AAGATAACCCATAATCCCCAAACCAGTTTGAGGCAAATGAGCTAGTTTACAGGCTACTGCTGACCCACCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| 3UTR CAA 72 bp | AGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTTaGTCCCTTAGGCAGAGATGGATGACTGTCAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: RSISAFSGRRIS*SLRQRWMTVNG Trigger: TCCATTGACAGTCATCCATCTCTGCCTAAGGGACAAAGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| 3UTR CAA 72 bp | GTAGCCTGTAAACTAGCTCATTTGCCTCAAACTGGTTaGGGGATTATGGGTTATCTTAATCTCTTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VACKLAHLPQTG*GIMGYLNLFPW Trigger: CCAGGGGAAGAGATTAAGATAACCCATAATCCCCAAACCAGTTTGAGGCAAATGAGCTAGTTTACAGGCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| CDS-3UTR GCA 90 bp | ATTTGCCTCAAACTGGTTTGGGGATTATGGGTTATCTTAATCTCTTCCCCTGGACCATGCCATATGAGATaGCAAAGAAGATGCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ICLKLVWGLWVILISSPGPCHMR*QRRCKR Trigger: TCTTTTGCATCTTCTTTGGCATCTCATATGGCATGG...TCCAGGGGAAGAGATTAAGATAACCCATAATCCCCAAACCAGTTTGAGGCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| CDS-3UTR CAA 90 bp | GGCGTCTCTCCGGCTGCACGCGGCCCGCCAAGGTGCCCGCTGCCGACCCCAGCGTCATGCATAAGCTCCTaGAAAAAGACGCTGACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GVSPAARGPPRCPLPTPASCISS*KKTLTA Trigger: GGCGGTCAGCGTCTTTTTCAAGGAGCTTATGCATGA...CGCTGGGGTCGGCAGCGGGCACCTTGGCGGGCCGCGTGCAGCCGGAGAGACGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGGGCGGGGGAGCCACAGGCTGCTTGGGCTCAGCAGGCTGGGTCCCTGGTTAGGGAAGGCTGGAAGTaGAGAGCCAGACCCAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EGAGEPQAAWAQQAGSLVREGWK*RARPKP Trigger: TGGCTTGGGTCTGGCTCTCAACTTCCAGCCTTCCCT...AACCAGGGACCCAGCCTGCTGAGCCCAAGCAGCCTGTGGCTCCCCCGCCCCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGGGCGGGGGAGCCACAGGCTGCTTGGGCTCAGCAGGCTGGGTCCCTGGTTCCGATGCAGAAGAAGTaGCCCAGCAGCAGCACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: EGAGEPQAAWAQQAGSLVPMQKK*PSSSTR Trigger: CCTTGTGCTGCTGCTGGGCAACTTCTTCTGCATCGG...AACCAGGGACCCAGCCTGCTGAGCCCAAGCAGCCTGTGGCTCCCCCGCCCCCTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS TCA 90 bp | CGAGTCCACTCCCACGTCCACAGGGGGCTTGTGGAGCTTCTCCTCTaGGGCCACCTCCTCAGGCTCTGTCACCTCGGGCCTCTTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RVHSHVHRGLVELLL*GHLLRLCHLGPLPL Trigger: AAGAGGAAGAGGCCCGAGGTGACAGAGCCTGAGGAGGTGGCCTCAGAGGAGAAGCTCCACAAGCCCCCTGTGGACGTGGGAGTGGACTCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS TCA 90 bp | GCTCACCACAAAGACCGGAGGCACAAAGAGTCCCAGCACCATGATTaGGGCGGCCACGGCATAGATGAGGAAGCCGCGGTCTCGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: AHHKDRRHKESQHHD*GGHGIDEEAAVSED Trigger: GTCTTCCGAGACCGCGGCTTCCTCATCTATGCCGTGGCCGCCTCAATCATGGTGCTGGGACTCTTTGTGCCTCCGGTCTTTGTGGTGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000129473.8 ENSMUST00000168579.8 |
||
| CDS-3UTR CAA 90 bp | GCAGATCCACTTTGGAATGACGCGGTTCCCACCCCGCCACCTCTCCCCGCAAAAAGGGAAGGCTGGAAGTaGAGAGCCAGACCCAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: ADPLWNDAVPTPPPLPAKREGWK*RARPKP Trigger: TGGCTTGGGTCTGGCTCTCAACTTCCAGCCTTCCCT...TTTTGCGGGGAGAGGTGGCGGGGTGGGAACCGCGTCATTCCAAAGTGGATCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CAA 90 bp | CACAGGCTGCTTGGGCTCAGCAGGCTGGGTCCCTGGTTTAGGTGGCTGATAACTACGTCCACAGGGGGCTaGTGGAGCTTCTCCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: HRLLGLSRLGPWFRWLITTSTGG*WSFSSE Trigger: CTCAGAGGAGAAGCTCCACAAGCCCCCTGTGGACGT...AGTTATCAGCCACCTAAACCAGGGACCCAGCCTGCTGAGCCCAAGCAGCCTGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CAA 90 bp | GGTGGGACTCAGGGTGAACAGACCACTGCCCAGAACCACACAGCTCCTAGAGACACGTCCACAGGGGGCTaGTGGAGCTTCTCCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GGTQGEQTTAQNHTAPRDTSTGG*WSFSSE Trigger: CTCAGAGGAGAAGCTCCACAAGCCCCCTGTGGACGT...GTCTCTAGGAGCTGTGTGGTTCTGGGCAGTGGTCTGTTCACCCTGAGTCCCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS GCA 90 bp | CAGCTGCCCCAGTGGAGACAGTGCACAAAGGAACACTGGGCTGCCTaGCGCTGCCAACCCATTGGCAATAGGGCGACGCTTGTTGAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: QLPQWRQCTKEHWAA*RCQPIGNRATLVEV Trigger: TACTTCAACAAGCGTCGCCCTATTGCCAATGGGTTGGCAGCGGCAGGCAGCCCAGTGTTCCTTTGTGCACTGTCTCCACTGGGGCAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000129473.8 ENSMUST00000154187.8 ENSMUST00000168579.8 |
||
| CDS-3UTR CAA 90 bp | GCAGATCCACTTTGGAATGACGCGGTTCCCACCCCGCCACCTCTCCCCGCAAAAGAAGGAAGGCGGCCTTaGTGTCGGGTACACCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: ADPLWNDAVPTPPPLPAKEGRRP*CRVHPY Trigger: ATATGGGTGTACCCGACACAAAGGCCGCCTTCCTTC...TTTTGCGGGGAGAGGTGGCGGGGTGGGAACCGCGTCATTCCAAAGTGGATCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGGGTGGGACTCAGGGTGAACAGACCACTGCCCAGAACCACACAGCTCCTAACGTCCACAGGGGGCTaGTGGAGCTTCTCCTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: QRVGLRVNRPLPRTTQLLTSTGG*WSFSSE Trigger: CTCAGAGGAGAAGCTCCACAAGCCCCCTGTGGACGT...TAGGAGCTGTGTGGTTCTGGGCAGTGGTCTGTTCACCCTGAGTCCCACCCTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTTGATGCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGCCGATGCAGAAGAAGTaGCCCAGCAGCAGCACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PLDAPPTGRSISAFSGRRPMQKK*PSSSTR Trigger: CCTTGTGCTGCTGCTGGGCAACTTCTTCTGCATCGG...CCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGCATCAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS GCA 90 bp | CCCCAGTGGAGACAGTGCACAAAGGAACACTGGGCTGCCTGCCGCTaGCAACCCATTGGCAATAGGGCGACGCTTGTTGAAGTATCGATT | + |
|
Preference number: 5 (lower is better) Translates to: PQWRQCTKEHWAACR*QPIGNRATLVEVSI Trigger: AATCGATACTTCAACAAGCGTCGCCCTATTGCCAATGGGTTGGCAGCGGCAGGCAGCCCAGTGTTCCTTTGTGCACTGTCTCCACTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000129473.8 ENSMUST00000154187.8 ENSMUST00000168579.8 |
||
| CDS-3UTR CAA 90 bp | GGCTTCCTTGGCTTCACCGCAGATCCACTTTGGAATGACGCGGTTCCCACCCCGTCATGCATAAGCTCCTaGAAAAAGACGCTGACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: GFLGFTADPLWNDAVPTPSCISS*KKTLTA Trigger: GGCGGTCAGCGTCTTTTTCAAGGAGCTTATGCATGA...CGGGGTGGGAACCGCGTCATTCCAAAGTGGATCTGCGGTGAAGCCAAGGAAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CAA 90 bp | GAGCTGAGCCGATGGCCCCGCCCGCCCTCAGCTGGTCCTGTTTGTGAAATAAATTCATGCATAAGCTCCTaGAAAAAGACGCTGACCGCC | + |
|
Preference number: 5 (lower is better) Translates to: ELSRWPRPPSAGPVCEINSCISS*KKTLTA Trigger: GGCGGTCAGCGTCTTTTTCAAGGAGCTTATGCATGA...ATTTATTTCACAAACAGGACCAGCTGAGGGCGGGCGGGGCCATCGGCTCAGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CAA 90 bp | GCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTTTGCCGATGCAGAAGAAGTaGCCCAGCAGCAGCACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: APPTGRSISAFSGRRISLPMQKK*PSSSTR Trigger: CCTTGTGCTGCTGCTGGGCAACTTCTTCTGCATCGG...CAAAGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CAA 90 bp | GATGCTCCTCCCACGGGCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTGAAGGAAGGCGGCCTTaGTGTCGGGTACACCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: DAPPTGRSISAFSGRRISEGRRP*CRVHPY Trigger: ATATGGGTGTACCCGACACAAAGGCCGCCTTCCTTC...AGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCTGCCCGTGGGAGGAGCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGGGTGGGACTCAGGGTGAACAGACCACTGCCCAGAACCACACAGCTCCTAAGGTCAGTGAAGCCATaGAAGAACATGGCAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QRVGLRVNRPLPRTTQLLRSVKP*KNMAKL Trigger: CAGCTTTGCCATGTTCTTCAATGGCTTCACTGACCT...TAGGAGCTGTGTGGTTCTGGGCAGTGGTCTGTTCACCCTGAGTCCCACCCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CAA 90 bp | CAAGATCCACTCTCCACAGCCAGGTCTAGAACTAGGAAGCCTGAAGCCTGGGGGAGGTCAGTGAAGCCATaGAAGAACATGGCAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: QDPLSTARSRTRKPEAWGRSVKP*KNMAKL Trigger: CAGCTTTGCCATGTTCTTCAATGGCTTCACTGACCT...CCCCCAGGCTTCAGGCTTCCTAGTTCTAGACCTGGCTGTGGAGAGTGGATCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168579.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTTTGTCCCTTAGGCAGAGAAGGAAGGCGGCCTTaGTGTCGGGTACACCCATAT | + |
|
Preference number: 5 (lower is better) Translates to: AGLFLPSQVEGFLCPLGREGRRP*CRVHPY Trigger: ATATGGGTGTACCCGACACAAAGGCCGCCTTCCTTC...TCTGCCTAAGGGACAAAGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGTCTATTTCTGCCTTCTCAGGTAGAAGGATTTCTTTGTCCCTTAGGCAGAAGGTCAGTGAAGCCATaGAAGAACATGGCAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGLFLPSQVEGFLCPLGRRSVKP*KNMAKL Trigger: CAGCTTTGCCATGTTCTTCAATGGCTTCACTGACCT...TCTGCCTAAGGGACAAAGAAATCCTTCTACCTGAGAAGGCAGAAATAGACCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS GCA 72 bp | GGGTCCGCGGGGCTCAGTCCCTCCGCCTACCTGCGGTaGCACCAGCGGCCTCATGAGCGCAGCACACACACA | + |
|
Preference number: 6 (lower is better) Translates to: GSAGLSPSAYLR*HQRPHERSTHT Trigger: TGTGTGTGTGCTGCGCTCATGAGGCCGCTGGTGGCACCGCAGGTAGGCGGAGGGACTGAGCCCCGCGGACCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000129473.8 ENSMUST00000154187.8 ENSMUST00000168579.8 |
||
| CDS TCA 72 bp | CCGCGGTCTCGGAAGACACTCAGGTCTAGCAGGCGTTaGGGTGGCCGCTGGGGTCCGCGGGGCTCAGTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PRSRKTLRSSRR*GGRWGPRGSVP Trigger: AGGGACTGAGCCCCGCGGACCCCAGCGGCCACCTCAACGCCTGCTAGACCTGAGTGTCTTCCGAGACCGCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000129473.8 ENSMUST00000154187.8 ENSMUST00000168579.8 |
||
| CDS TCA 72 bp | TTGCATCCAGCAGCTTGCCTCCTGACGGGGGTCCGATaGGCACAGCCACGGCCTCCAGCAGCAGCACGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LHPAACLLTGVR*AQPRPPAAARD Trigger: GTCTCGTGCTGCTGCTGGAGGCCGTGGCTGTGCTCATCGGACCCCCGTCAGGAGGCAAGCTGCTGGATGCAA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS CAA 90 bp | GGCTCTGTCACCTCGGGCCTCTTCCTCTTCCCGATGCAGAAGAAGTaGCCCAGCAGCAGCACAAGGGAGGAGGTGAGCACCTCGGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: GSVTSGLFLFPMQKK*PSSSTREEVSTSAP Trigger: GGGGGCCGAGGTGCTCACCTCCTCCCTTGTGCTGCTGCTGGGCAACTTCTTCTGCATCGGGAAGAGGAAGAGGCCCGAGGTGACAGAGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS GCA 72 bp | CAGGCTCTGTCACCTCGGGCCTCTTCCTCTTCCCGATaGAGAAGAAGTTGCCCAGCAGCAGCACAAGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QALSPRASSSSR*RRSCPAAAQGR Trigger: CCTCCCTTGTGCTGCTGCTGGGCAACTTCTTCTGCATCGGGAAGAGGAAGAGGCCCGAGGTGACAGAGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS CAA 72 bp | ACCTCGGGCCTCTTCCTCTTCCCGATGCAGAAGAAGTaGCCCAGCAGCAGCACAAGGGAGGAGGTGAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: TSGLFLFPMQKK*PSSSTREEVST Trigger: GGTGCTCACCTCCTCCCTTGTGCTGCTGCTGGGCAACTTCTTCTGCATCGGGAAGAGGAAGAGGCCCGAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||
| CDS TCA 72 bp | AAAGACCGGAGGCACAAAGAGTCCCAGCACCATGATTaGGGCGGCCACGGCATAGATGAGGAAGCCGCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: KDRRHKESQHHD*GGHGIDEEAAV Trigger: GACCGCGGCTTCCTCATCTATGCCGTGGCCGCCTCAATCATGGTGCTGGGACTCTTTGTGCCTCCGGTCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000129473.8 ENSMUST00000154187.8 ENSMUST00000168579.8 |
||
| CDS GCA 72 bp | CAGTGGAGACAGTGCACAAAGGAACACTGGGCTGCCTaGCGCTGCCAACCCATTGGCAATAGGGCGACGCTT | + |
|
Preference number: 6 (lower is better) Translates to: QWRQCTKEHWAA*RCQPIGNRATL Trigger: AAGCGTCGCCCTATTGCCAATGGGTTGGCAGCGGCAGGCAGCCCAGTGTTCCTTTGTGCACTGTCTCCACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000129473.8 ENSMUST00000154187.8 ENSMUST00000168579.8 |
||
| CDS GCA 72 bp | AGACAGTGCACAAAGGAACACTGGGCTGCCTGCCGCTaGCAACCCATTGGCAATAGGGCGACGCTTGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RQCTKEHWAACR*QPIGNRATLVE Trigger: TTCAACAAGCGTCGCCCTATTGCCAATGGGTTGGCAGCGGCAGGCAGCCCAGTGTTCCTTTGTGCACTGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000129473.8 ENSMUST00000154187.8 ENSMUST00000168579.8 |
||
| CDS CAA 72 bp | CAAAGGAACACTGGGCTGCCTGCCGCTGCCAACCCATaGGCAATAGGGCGACGCTTGTTGAAGTATCGATTG | + |
|
Preference number: 6 (lower is better) Translates to: QRNTGLPAAANP*AIGRRLLKYRL Trigger: CAATCGATACTTCAACAAGCGTCGCCCTATTGCCAATGGGTTGGCAGCGGCAGGCAGCCCAGTGTTCCTTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000129473.8 ENSMUST00000154187.8 ENSMUST00000168579.8 |
||
| CDS CAA 90 bp | GACAGTGCACAAAGGAACACTGGGCTGCCTGCCGCTGCCAACCCATaGGCAATAGGGCGACGCTTGTTGAAGTATCGATTGAGCATGATG | + |
|
Preference number: 6 (lower is better) Translates to: DSAQRNTGLPAAANP*AIGRRLLKYRLSMM Trigger: CATCATGCTCAATCGATACTTCAACAAGCGTCGCCCTATTGCCAATGGGTTGGCAGCGGCAGGCAGCCCAGTGTTCCTTTGTGCACTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000129473.8 ENSMUST00000154187.8 ENSMUST00000168579.8 |
||
| CDS TCA 72 bp | AGCAGCAGCACGAGACCAATGGCACTGGAGAACTTCTaGGTGCCCACGATAGCCATGAGCACCTCAAACTGT | + |
|
Preference number: 6 (lower is better) Translates to: SSSTRPMALENF*VPTIAMSTSNC Trigger: ACAGTTTGAGGTGCTCATGGCTATCGTGGGCACTCAGAAGTTCTCCAGTGCCATTGGTCTCGTGCTGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000070653.13 ENSMUST00000100130.10 ENSMUST00000168579.8 |
||