Pregenerated sensors for SLC16A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033965Ensembl transcript IDs: ENSMUST00000042664.10
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGAGAGAGAGAAACAGGGAGGAGAGAGGCTGAGTCCCTAATGAGGTaGGCCGTACAACTGGACGAGGCTGGCAGTGCCCTTTGCCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: RERETGRREAESLMR*AVQLDEAGSALCLW Trigger: CCAGAGGCAAAGGGCACTGCCAGCCTCGTCCAGTTGTACGGCTCACCTCATTAGGGACTCAGCCTCTCTCCTCCCTGTTTCTCTCTCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR TCA 90 bp | AGGGCTCCTGGGGCCCAGCTTCTCCTGTTCCATAGATGCTTGAGTTaGCAGGACAGTGACTCCACCCCTTCCTGTCCTCAGAGCCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: RAPGAQLLLFHRCLS*QDSDSTPSCPQSQE Trigger: TTCTTGGCTCTGAGGACAGGAAGGGGTGGAGTCACTGTCCTGTCAACTCAAGCATCTATGGAACAGGAGAAGCTGGGCCCCAGGAGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR CCA 90 bp | CCCTCAGAGCAACCTCATCTTCCTGGCCTTGGGATGACCCTAGCTTaGGGTGGCAAGTTATTGTTGGGTCCAAGTAACAGCCAGGATGCC | + |
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Preference number: 1 (lower is better) Translates to: PSEQPHLPGLGMTLA*GGKLLLGPSNSQDA Trigger: GGCATCCTGGCTGTTACTTGGACCCAACAATAACTTGCCACCCCAAGCTAGGGTCATCCCAAGGCCAGGAAGATGAGGTTGCTCTGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR TCA 90 bp | TTTGGAACACCGAGAGCATTGGCTCAGAGGAGATGGTCAGGTGGCTaGAATGCTGTGTGCACAGGTTTGGGAACAAGTGTGCTGGTGGCA | + |
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Preference number: 1 (lower is better) Translates to: FGTPRALAQRRWSGG*NAVCTGLGTSVLVA Trigger: TGCCACCAGCACACTTGTTCCCAAACCTGTGCACACAGCATTTCAGCCACCTGACCATCTCCTCTGAGCCAATGCTCTCGGTGTTCCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR CCA 90 bp | GGAGGATCCAAAGGCCAGGGGGTGATCCCACACTTTCCCAGATTCTaGGAGAAGAGCCTGGCAAGTTTCAAGGCATTCATGGGGAGAATT | + |
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Preference number: 1 (lower is better) Translates to: GGSKGQGVIPHFPRF*EKSLASFKAFMGRI Trigger: AATTCTCCCCATGAATGCCTTGAAACTTGCCAGGCTCTTCTCCCAGAATCTGGGAAAGTGTGGGATCACCCCCTGGCCTTTGGATCCTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR CCA 90 bp | GGACCATTGTATTCTTTGGAGCCCCTCAGAGCAACCTCATCTTCCTaGCCTTGGGATGACCCTAGCTTGGGGTGGCAAGTTATTGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: GPLYSLEPLRATSSS*PWDDPSLGWQVIVG Trigger: CCCAACAATAACTTGCCACCCCAAGCTAGGGTCATCCCAAGGCCAGGAAGATGAGGTTGCTCTGAGGGGCTCCAAAGAATACAATGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR GCA 90 bp | AACCAACCATATGATGGGGTGCCGCAGAGTCCTCAGGAGCTTCGATaGAAAACAAGGCTCCTGGTCTCCTTTGGCCTTCCTTCTCACAAT | + |
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Preference number: 1 (lower is better) Translates to: NQPYDGVPQSPQELR*KTRLLVSFGLPSHN Trigger: ATTGTGAGAAGGAAGGCCAAAGGAGACCAGGAGCCTTGTTTTGCATCGAAGCTCCTGAGGACTCTGCGGCACCCCATCATATGGTTGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR TCA 90 bp | TTTCTTGGCCTGGCCCAGGTGGAAATATTGACCTCTTATGAAAAATaGGAGACGGAGGAGTTGGTCCTTCCCCAAACCGTTAACCGTAGC | + |
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Preference number: 1 (lower is better) Translates to: FLGLAQVEILTSYEK*ETEELVLPQTVNRS Trigger: GCTACGGTTAACGGTTTGGGGAAGGACCAACTCCTCCGTCTCTCATTTTTCATAAGAGGTCAATATTTCCACCTGGGCCAGGCCAAGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR CCA 90 bp | TGGGAGAAGAGCCTGGCAAGTTTCAAGGCATTCATGGGGAGAATTTaGTTAATGAGTTTGGAACACCGAGAGCATTGGCTCAGAGGAGAT | + |
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Preference number: 1 (lower is better) Translates to: WEKSLASFKAFMGRI*LMSLEHREHWLRGD Trigger: ATCTCCTCTGAGCCAATGCTCTCGGTGTTCCAAACTCATTAACCAAATTCTCCCCATGAATGCCTTGAAACTTGCCAGGCTCTTCTCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR TCA 90 bp | GCGATAGCCTGCTCTTCCAGTCCATATCAGTTTGAGCCCAGAAAGTaGGATGTAGCTCAACCTGAGATGAGCAGTATTAATGCTAATATT | + |
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Preference number: 1 (lower is better) Translates to: AIACSSSPYQFEPRK*DVAQPEMSSINANI Trigger: AATATTAGCATTAATACTGCTCATCTCAGGTTGAGCTACATCTCACTTTCTGGGCTCAAACTGATATGGACTGGAAGAGCAGGCTATCGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | GTGAGCCGTACAACTGGACGAGGCTGGCAGTGCCCTTTGCCTCTGGCCAGGGGCGCCCACTCAGCAGAGTaGTCCAGGATGCCTAGAATG | + |
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Preference number: 2 (lower is better) Translates to: VSRTTGRGWQCPLPLARGAHSAE*SRMPRM Trigger: CATTCTAGGCATCCTGGACCACTCTGCTGAGTGGGC...GCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCCTCGTCCAGTTGTACGGCTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR GCA 90 bp | GCCGTACAACTGGACGAGGCTGGCAGTGCCCTTTGCCTCTGGCCAGGGGCACTTCAGAGTGGTCCAGGATaGCTAGAATGGGGGACAGAC | + |
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Preference number: 2 (lower is better) Translates to: AVQLDEAGSALCLWPGALQSGPG*LEWGTD Trigger: GTCTGTCCCCCATTCTAGGCATCCTGGACCACTCTG...AAGTGCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCCTCGTCCAGTTGTACGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | GTGAGCCGTACAACTGGACGAGGCTGGCAGTGCCCTTTGCCTCTGGCCAGGGGCGCAAAACAAGGCTCCTaGTCTCCTTTGGCCTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: VSRTTGRGWQCPLPLARGAKQGS*SPLAFL Trigger: AAGGAAGGCCAAAGGAGACCAGGAGCCTTGTTTTGC...GCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCCTCGTCCAGTTGTACGGCTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR GCA 90 bp | GTGCTGCTTTGGCCAAACAACATTCTCTCGGAAAGCACACAAGCCCACACGTGCGCTGGCAGTGCCCTTTaGCTCTGGCCAGGGGCACTT | + |
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Preference number: 2 (lower is better) Translates to: VLLWPNNILSESTQAHTCAGSAL*LWPGAL Trigger: AAGTGCCCCTGGCCAGAGGCAAAGGGCACTGCCAGC...GCACGTGTGGGCTTGTGTGCTTTCCGAGAGAATGTTGTTTGGCCAAAGCAGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | GCCGTACAACTGGACGAGGCTGGCAGTGCCCTTTGCCTCTGGCCAGGGGCACTTCAGAATGAAGTGGATTaGCCCAAGCTCTGGGTCTTT | + |
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Preference number: 2 (lower is better) Translates to: AVQLDEAGSALCLWPGALQNEVD*PKLWVF Trigger: AAAGACCCAGAGCTTGGGCCAATCCACTTCATTCTG...AAGTGCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCCTCGTCCAGTTGTACGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR TCA 90 bp | GTGAGCCGTACAACTGGACGAGGCTGGCAGTGCCCTTTGCCTCTGGCCAGGGGCCCCAGGTGGAAATATTaGCCTCTTATGAAAAATGAG | + |
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Preference number: 2 (lower is better) Translates to: VSRTTGRGWQCPLPLARGPRWKY*PLMKNE Trigger: CTCATTTTTCATAAGAGGTCAATATTTCCACCTGGG...GCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCCTCGTCCAGTTGTACGGCTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | GTGCTGCTTTGGCCAAACAACATTCTCTCGGAAAGCACACAAGCCCACACGTGCGACAGGTGGGAAGGATaGGAAACTGGGAAGGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: VLLWPNNILSESTQAHTCDRWEG*ETGKAS Trigger: AGAGGCCTTCCCAGTTTCCCATCCTTCCCACCTGTC...GCACGTGTGGGCTTGTGTGCTTTCCGAGAGAATGTTGTTTGGCCAAAGCAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | GTGCTGCTTTGGCCAAACAACATTCTCTCGGAAAGCACACAAGCCCACACGTGCTCATCTTCCTGGCCTTaGGATGACCCTAGCTTGGGG | + |
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Preference number: 2 (lower is better) Translates to: VLLWPNNILSESTQAHTCSSSWP*DDPSLG Trigger: CCCCAAGCTAGGGTCATCCCAAGGCCAGGAAGATGA...GCACGTGTGGGCTTGTGTGCTTTCCGAGAGAATGTTGTTTGGCCAAAGCAGCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGGGGACCATTGTATTCTTTGGAGCCCCTCAGAGCAACCTCATCTTCCTGCTGTGTGCACAGGTTTaGGAACAAGTGTGCTGGTGG | + |
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Preference number: 2 (lower is better) Translates to: CVGTIVFFGAPQSNLIFLLCAQV*EQVCWW Trigger: CCACCAGCACACTTGTTCCCAAACCTGTGCACACAG...CAGGAAGATGAGGTTGCTCTGAGGGGCTCCAAAGAATACAATGGTCCCCACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | TGTGTGGGGACCATTGTATTCTTTGGAGCCCCTCAGAGCAACCTCATCTTCCTGGAACACCGAGAGCATTaGCTCAGAGGAGATGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: CVGTIVFFGAPQSNLIFLEHREH*LRGDGQ Trigger: CTGACCATCTCCTCTGAGCCAATGCTCTCGGTGTTC...CAGGAAGATGAGGTTGCTCTGAGGGGCTCCAAAGAATACAATGGTCCCCACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR CAA 90 bp | CATCTTCCTGGCCTTGGGATGACCCTAGCTTGGGGTGGCAAGTTATaGTTGGGTCCAAGTAACAGCCAGGATGCCTGGCAAAAAGATGAT | + |
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Preference number: 2 (lower is better) Translates to: HLPGLGMTLAWGGKL*LGPSNSQDAWQKDD Trigger: ATCATCTTTTTGCCAGGCATCCTGGCTGTTACTTGGACCCAACAATAACTTGCCACCCCAAGCTAGGGTCATCCCAAGGCCAGGAAGATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | CAGAGTCCTCAGGAGCTTCGATGCAAAACAAGGCTCCTGGTCTCCTTTGGCCTTTCTGGGAGAAGAGCCTaGCAAGTTTCAAGGCATTCA | + |
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Preference number: 2 (lower is better) Translates to: QSPQELRCKTRLLVSFGLSGRRA*QVSRHS Trigger: TGAATGCCTTGAAACTTGCCAGGCTCTTCTCCCAGA...AAGGCCAAAGGAGACCAGGAGCCTTGTTTTGCATCGAAGCTCCTGAGGACTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR CAA 90 bp | CTTCCTGGCCTTGGGATGACCCTAGCTTGGGGTGGCAAGTTATTGTaGGGTCCAAGTAACAGCCAGGATGCCTGGCAAAAAGATGATAAA | + |
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Preference number: 2 (lower is better) Translates to: LPGLGMTLAWGGKLL*GPSNSQDAWQKDDK Trigger: TTTATCATCTTTTTGCCAGGCATCCTGGCTGTTACTTGGACCCAACAATAACTTGCCACCCCAAGCTAGGGTCATCCCAAGGCCAGGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGGGGACCATTGTATTCTTTGGAGCCCCTCAGAGCAACCTCATCTTCCTGTTTGAGCCCAGAAAGTaGGATGTAGCTCAACCTGAG | + |
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Preference number: 2 (lower is better) Translates to: CVGTIVFFGAPQSNLIFLFEPRK*DVAQPE Trigger: CTCAGGTTGAGCTACATCTCACTTTCTGGGCTCAAA...CAGGAAGATGAGGTTGCTCTGAGGGGCTCCAAAGAATACAATGGTCCCCACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR CAA 90 bp | CTGGCAAGTTTCAAGGCATTCATGGGGAGAATTTGGTTAATGAGTTaGGAACACCGAGAGCATTGGCTCAGAGGAGATGGTCAGGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: LASFKAFMGRIWLMS*EHREHWLRGDGQVA Trigger: AGCCACCTGACCATCTCCTCTGAGCCAATGCTCTCGGTGTTCCAAACTCATTAACCAAATTCTCCCCATGAATGCCTTGAAACTTGCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR TCA 90 bp | AGCAGTTCATTTCTTGGCCTGGCCCAGGTGGAAATATTGACCTCTTATGAAAAACCAAAGGCCAGGGGGTaGTCCCACACTTTCCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: SSSFLGLAQVEILTSYEKPKARG*SHTFPD Trigger: ATCTGGGAAAGTGTGGGATCACCCCCTGGCCTTTGG...TTTTTCATAAGAGGTCAATATTTCCACCTGGGCCAGGCCAAGAAATGAACTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR TCA 90 bp | ATGATGGTGGTCCAGAGCCTACTTTTTCTGGCACCTATAATGCCCACTCAGCAGGAGTTTCTTCACATTTaGCAGGTGGGAAGGATGGGA | + |
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Preference number: 2 (lower is better) Translates to: MMVVQSLLFLAPIMPTQQEFLHI*QVGRMG Trigger: TCCCATCCTTCCCACCTGTCAAATGTGAAGAAACTC...CTGCTGAGTGGGCATTATAGGTGCCAGAAAAAGTAGGCTCTGGACCACCATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | CCTACGTGCAGTTGTTGCCTATGTCATTTGGAGATCCAGGTACAGAATGAGGTTGAGGAGATGGTCAGGTaGCTGAAATGCTGTGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: PTCSCCLCHLEIQVQNEVEEMVR*LKCCVH Trigger: GTGCACACAGCATTTCAGCCACCTGACCATCTCCTC...AACCTCATTCTGTACCTGGATCTCCAAATGACATAGGCAACAACTGCACGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | ATGATGGTGGTCCAGAGCCTACTTTTTCTGGCACCTATAATGCCCACTCAGCAGAAGCAGTTCATTTCTTaGCCTGGCCCAGGTGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: MMVVQSLLFLAPIMPTQQKQFIS*PGPGGN Trigger: ATTTCCACCTGGGCCAGGCCAAGAAATGAACTGCTT...CTGCTGAGTGGGCATTATAGGTGCCAGAAAAAGTAGGCTCTGGACCACCATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | AGTTATTGTTGGGTCCAAGTAACAGCCAGGATGCCTGGCAAAAAGATGATAAAAAGTGCCCTTTGCCTCTaGCCAGGGGCACTTGGAATG | + |
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Preference number: 2 (lower is better) Translates to: SYCWVQVTARMPGKKMIKSALCL*PGALGM Trigger: CATTCCAAGTGCCCCTGGCCAGAGGCAAAGGGCACT...TTTTATCATCTTTTTGCCAGGCATCCTGGCTGTTACTTGGACCCAACAATAACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | GAGAAATGGAAGTGGAAGCATTGTTGCTTCAGTATTTTCAATGGCCTCTCCTGGTGTCTCACTGGGTTCTaGGGACACAGTAGCACCTTT | + |
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Preference number: 2 (lower is better) Translates to: EKWKWKHCCFSIFNGLSWCLTGF*GHSSTF Trigger: AAAGGTGCTACTGTGTCCCCAGAACCCAGTGAGACA...CCAGGAGAGGCCATTGAAAATACTGAAGCAACAATGCTTCCACTTCCATTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | GAGAAATGGAAGTGGAAGCATTGTTGCTTCAGTATTTTCAATGGCCTCTCCTGGGTGGCAAGTTATTGTTaGGTCCAAGTAACAGCCAGG | + |
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Preference number: 2 (lower is better) Translates to: EKWKWKHCCFSIFNGLSWVASYC*VQVTAR Trigger: CCTGGCTGTTACTTGGACCCAACAATAACTTGCCAC...CCAGGAGAGGCCATTGAAAATACTGAAGCAACAATGCTTCCACTTCCATTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR TCA 90 bp | CCTACGTGCAGTTGTTGCCTATGTCATTTGGAGATCCAGGTACAGAATGAGGTTATCTGTCAAAATCAGTaGCTGGTACATGGAACTCTG | + |
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Preference number: 2 (lower is better) Translates to: PTCSCCLCHLEIQVQNEVICQNQ*LVHGTL Trigger: CAGAGTTCCATGTACCAGTCACTGATTTTGACAGAT...AACCTCATTCTGTACCTGGATCTCCAAATGACATAGGCAACAACTGCACGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | AGTAAGACTGTTGCCCAGAGCCTGGATGTAGGAAAATATCTGGCACCAACTTCAGTTAGAAAGTATATATaGGGGAGGATCCAAAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: SKTVAQSLDVGKYLAPTSVRKYI*GRIQRP Trigger: TGGCCTTTGGATCCTCCCCCATATATACTTTCTAAC...TGAAGTTGGTGCCAGATATTTTCCTACATCCAGGCTCTGGGCAACAGTCTTACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR GCA 90 bp | AGGCTGCTTCCTACTCTAAATATTAATACTGTGCTGCTTTGGCCAAACAACATTAGATTCCCATCCCTATaGGATAGCCTGCTCTTCCAG | + |
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Preference number: 2 (lower is better) Translates to: RLLPTLNINTVLLWPNNIRFPSL*DSLLFQ Trigger: CTGGAAGAGCAGGCTATCGCATAGGGATGGGAATCT...AATGTTGTTTGGCCAAAGCAGCACAGTATTAATATTTAGAGTAGGAAGCAGCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | AGTTATTGTTGGGTCCAAGTAACAGCCAGGATGCCTGGCAAAAAGATGATAAAAGGAAGGATGGGAAACTaGGAAGGCCTCTTGGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: SYCWVQVTARMPGKKMIKGRMGN*EGLLVN Trigger: ATTAACCAAGAGGCCTTCCCAGTTTCCCATCCTTCC...TTTTATCATCTTTTTGCCAGGCATCCTGGCTGTTACTTGGACCCAACAATAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGCTTCCTACTCTAAATATTAATACTGTGCTGCTTTGGCCAAACAACATTTTCACATTTGACAGGTaGGAAGGATGGGAAACTGGG | + |
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Preference number: 2 (lower is better) Translates to: RLLPTLNINTVLLWPNNIFTFDR*EGWETG Trigger: CCCAGTTTCCCATCCTTCCCACCTGTCAAATGTGAA...AATGTTGTTTGGCCAAAGCAGCACAGTATTAATATTTAGAGTAGGAAGCAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGCTTCCTACTCTAAATATTAATACTGTGCTGCTTTGGCCAAACAACATTGACCATTGTATTCTTTaGAGCCCCTCAGAGCAACCT | + |
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Preference number: 2 (lower is better) Translates to: RLLPTLNINTVLLWPNNIDHCIL*SPSEQP Trigger: AGGTTGCTCTGAGGGGCTCCAAAGAATACAATGGTC...AATGTTGTTTGGCCAAAGCAGCACAGTATTAATATTTAGAGTAGGAAGCAGCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR TCA 90 bp | AGTAACAGCCAGGATGCCTGGCAAAAAGATGATAAAAGGTTGGTACAGGAACACAATATTGACCTCTTATaGAAAATGAGAGACGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: SNSQDAWQKDDKRLVQEHNIDLL*KMRDGG Trigger: TCCTCCGTCTCTCATTTTTCATAAGAGGTCAATATT...GTGTTCCTGTACCAACCTTTTATCATCTTTTTGCCAGGCATCCTGGCTGTTACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | AGGCTGCTTCCTACTCTAAATATTAATACTGTGCTGCTTTGGCCAAACAACATTTGGGGTAAGGAGAAATaGAAGTGGAAGCATTGTTGC | + |
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Preference number: 2 (lower is better) Translates to: RLLPTLNINTVLLWPNNIWGKEK*KWKHCC Trigger: GCAACAATGCTTCCACTTCCATTTCTCCTTACCCCA...AATGTTGTTTGGCCAAAGCAGCACAGTATTAATATTTAGAGTAGGAAGCAGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CCA 90 bp | AGTTATTGTTGGGTCCAAGTAACAGCCAGGATGCCTGGCAAAAAGATGATAAAAATATTAGGGATGGTCTaGGTCAGAATGAAGTGGATT | + |
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Preference number: 2 (lower is better) Translates to: SYCWVQVTARMPGKKMIKILGMV*VRMKWI Trigger: AATCCACTTCATTCTGACCCAGACCATCCCTAATAT...TTTTATCATCTTTTTGCCAGGCATCCTGGCTGTTACTTGGACCCAACAATAACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR-3UTR CAA 90 bp | AACTCATGTGTGGGGACCATTGTATTCTTTGGAGCCCCTCAGAGCAACCTCATCGGCTGGCAGTGCCCTTaGCCTCTGGCCAGGGGCACT | + |
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Preference number: 3 (lower is better) Translates to: NSCVGTIVFFGAPQSNLIGWQCP*PLARGT Trigger: AGTGCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCC...GATGAGGTTGCTCTGAGGGGCTCCAAAGAATACAATGGTCCCCACACATGAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR TCA 72 bp | GAAACAGGGAGGAGAGAGGCTGAGTCCCTAATGAGGTaGGCCGTACAACTGGACGAGGCTGGCAGTGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: ETGRREAESLMR*AVQLDEAGSAL Trigger: AAGGGCACTGCCAGCCTCGTCCAGTTGTACGGCTCACCTCATTAGGGACTCAGCCTCTCTCCTCCCTGTTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR CCA 72 bp | GTACAACTGGACGAGGCTGGCAGTGCCCTTTGCCTCTaGCCAGGGGCACTTGGAATGTGCTTCAGTAAGACT | + |
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Preference number: 3 (lower is better) Translates to: VQLDEAGSALCL*PGALGMCFSKT Trigger: AGTCTTACTGAAGCACATTCCAAGTGCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCCTCGTCCAGTTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR GCA 72 bp | TATGATGGGGTGCCGCAGAGTCCTCAGGAGCTTCGATaGAAAACAAGGCTCCTGGTCTCCTTTGGCCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: YDGVPQSPQELR*KTRLLVSFGLP Trigger: AGGAAGGCCAAAGGAGACCAGGAGCCTTGTTTTGCATCGAAGCTCCTGAGGACTCTGCGGCACCCCATCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| 3UTR GCA 72 bp | GCACCTATAATGCCCACTCAGCAGAGTGGTCCAGGATaGCTAGAATGGGGGACAGACTGGGTGGGTGGTAAA | + |
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Preference number: 3 (lower is better) Translates to: APIMPTQQSGPG*LEWGTDWVGGK Trigger: TTTACCACCCACCCAGTCTGTCCCCCATTCTAGGCATCCTGGACCACTCTGCTGAGTGGGCATTATAGGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR CCA 72 bp | ATGGAAGTGGAAGCATTGTTGCTTCAGTATTTTCAATaGCCTCTCCTGGGAGTCGCAGGGCTCCTGGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: MEVEALLLQYFQ*PLLGVAGLLGP Trigger: GGGCCCCAGGAGCCCTGCGACTCCCAGGAGAGGCCATTGAAAATACTGAAGCAACAATGCTTCCACTTCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGTCCTCAGGAGCTTCGATGCAAAACAAGGCTCCTGGTCTCCTTTGGCCTTGGAACACCGAGAGCATaGGCTCAGAGGAGATGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: QSPQELRCKTRLLVSFGLGTPRA*AQRRWS Trigger: TGACCATCTCCTCTGAGCCAATGCTCTCGGTGTTCC...AAGGCCAAAGGAGACCAGGAGCCTTGTTTTGCATCGAAGCTCCTGAGGACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR TCA 72 bp | CCGAGAGCATTGGCTCAGAGGAGATGGTCAGGTGGCTaGAATGCTGTGTGCACAGGTTTGGGAACAAGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PRALAQRRWSGG*NAVCTGLGTSV Trigger: CACACTTGTTCCCAAACCTGTGCACACAGCATTTCAGCCACCTGACCATCTCCTCTGAGCCAATGCTCTCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR CCA 72 bp | TATTCTTTGGAGCCCCTCAGAGCAACCTCATCTTCCTaGCCTTGGGATGACCCTAGCTTGGGGTGGCAAGTT | + |
|
Preference number: 3 (lower is better) Translates to: YSLEPLRATSSS*PWDDPSLGWQV Trigger: AACTTGCCACCCCAAGCTAGGGTCATCCCAAGGCCAGGAAGATGAGGTTGCTCTGAGGGGCTCCAAAGAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTGCTTTGGCCAAACAACATTCTCTCGGAAAGCACACAAGCCCACACGTGCGGCTCCTGGTCTCCTTaGGCCTTCCTTCTCACAATT | + |
|
Preference number: 3 (lower is better) Translates to: VLLWPNNILSESTQAHTCGSWSP*AFLLTI Trigger: AATTGTGAGAAGGAAGGCCAAAGGAGACCAGGAGCC...GCACGTGTGGGCTTGTGTGCTTTCCGAGAGAATGTTGTTTGGCCAAAGCAGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR TCA 72 bp | AAAGTATATATGGGGGAGGATCCAAAGGCCAGGGGGTaGTCCCACACTTTCCCAGATTCTGGGAGAAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: KVYMGEDPKARG*SHTFPDSGRRA Trigger: GGCTCTTCTCCCAGAATCTGGGAAAGTGTGGGATCACCCCCTGGCCTTTGGATCCTCCCCCATATATACTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR GCA 72 bp | AGCATTGGCTCAGAGGAGATGGTCAGGTGGCTGAAATaGTGTGTGCACAGGTTTGGGAACAAGTGTGCTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SIGSEEMVRWLK*CVHRFGNKCAG Trigger: ACCAGCACACTTGTTCCCAAACCTGTGCACACAGCATTTCAGCCACCTGACCATCTCCTCTGAGCCAATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR CCA 72 bp | AAAGGCCAGGGGGTGATCCCACACTTTCCCAGATTCTaGGAGAAGAGCCTGGCAAGTTTCAAGGCATTCATG | + |
|
Preference number: 3 (lower is better) Translates to: KGQGVIPHFPRF*EKSLASFKAFM Trigger: CATGAATGCCTTGAAACTTGCCAGGCTCTTCTCCCAGAATCTGGGAAAGTGTGGGATCACCCCCTGGCCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR CCA 72 bp | ACTTTTTCTGGCACCTATAATGCCCACTCAGCAGAGTaGTCCAGGATGCCTAGAATGGGGGACAGACTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: TFSGTYNAHSAE*SRMPRMGDRLG Trigger: ACCCAGTCTGTCCCCCATTCTAGGCATCCTGGACCACTCTGCTGAGTGGGCATTATAGGTGCCAGAAAAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR CCA 72 bp | CAACCTCATCTTCCTGGCCTTGGGATGACCCTAGCTTaGGGTGGCAAGTTATTGTTGGGTCCAAGTAACAGC | + |
|
Preference number: 3 (lower is better) Translates to: QPHLPGLGMTLA*GGKLLLGPSNS Trigger: GCTGTTACTTGGACCCAACAATAACTTGCCACCCCAAGCTAGGGTCATCCCAAGGCCAGGAAGATGAGGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGAGTTAGAAAGTATATATGGGGGAGGATCCAAAGGCCAGGGGGTGATCCCGCTGTGTGCACAGGTTaGGGAACAAGTGTGCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: QRVRKYIWGRIQRPGGDPAVCTG*GTSVLV Trigger: CACCAGCACACTTGTTCCCAAACCTGTGCACACAGC...GGGATCACCCCCTGGCCTTTGGATCCTCCCCCATATATACTTTCTAACTCTTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGGGGACCATTGTATTCTTTGGAGCCCCTCAGAGCAACCTCATCTTCCTGGGTGGCAAGTTATTGTaGGGTCCAAGTAACAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CVGTIVFFGAPQSNLIFLGGKLL*GPSNSQ Trigger: CTGGCTGTTACTTGGACCCAACAATAACTTGCCACC...CAGGAAGATGAGGTTGCTCTGAGGGGCTCCAAAGAATACAATGGTCCCCACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR CCA 72 bp | CCTGTCCTCAGAGCCAAGAACCAATGGGTTTTCCTTTaGGGAGTTGATAAGAGCTGGATTGGGACCAGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PVLRAKNQWVFL*GVDKSWIGTSR Trigger: TCTGCTGGTCCCAATCCAGCTCTTATCAACTCCCCAAAGGAAAACCCATTGGTTCTTGGCTCTGAGGACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTGTGGGGACCATTGTATTCTTTGGAGCCCCTCAGAGCAACCTCATCTTCCTGGACACAGTAGCACCTTaGGCAATTGATTGTAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: CVGTIVFFGAPQSNLIFLDTVAP*AIDCSG Trigger: CCCACTACAATCAATTGCCAAAGGTGCTACTGTGTC...CAGGAAGATGAGGTTGCTCTGAGGGGCTCCAAAGAATACAATGGTCCCCACACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR-3UTR CAA 90 bp | ATGATGGTGGTCCAGAGCCTACTTTTTCTGGCACCTATAATGCCCACTCAGCAGTGGAACTCTGTAGTGTaGAAGATTCCCATCCCTATG | + |
|
Preference number: 3 (lower is better) Translates to: MMVVQSLLFLAPIMPTQQWNSVV*KIPIPM Trigger: CATAGGGATGGGAATCTTCAACACTACAGAGTTCCA...CTGCTGAGTGGGCATTATAGGTGCCAGAAAAAGTAGGCTCTGGACCACCATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR CCA 72 bp | AGAATTTGGTTAATGAGTTTGGAACACCGAGAGCATTaGCTCAGAGGAGATGGTCAGGTGGCTGAAATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RIWLMSLEHREH*LRGDGQVAEML Trigger: CAGCATTTCAGCCACCTGACCATCTCCTCTGAGCCAATGCTCTCGGTGTTCCAAACTCATTAACCAAATTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR-3UTR CAA 90 bp | GATGGCAACAAATTCCTCAGCAAACAGAGGCTTAGGTCTGTCTCACTGGGTTCTATTTGGTTAATGAGTTaGGAACACCGAGAGCATTGG | + |
|
Preference number: 3 (lower is better) Translates to: DGNKFLSKQRLRSVSLGSIWLMS*EHREHW Trigger: CCAATGCTCTCGGTGTTCCAAACTCATTAACCAAAT...AGAACCCAGTGAGACAGACCTAAGCCTCTGTTTGCTGAGGAATTTGTTGCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAATGGAAGTGGAAGCATTGTTGCTTCAGTATTTTCAATGGCCTCTCCTGGCCAGTCCATATCAGTTaGAGCCCAGAAAGTGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: EKWKWKHCCFSIFNGLSWPVHIS*SPESEM Trigger: CATCTCACTTTCTGGGCTCAAACTGATATGGACTGG...CCAGGAGAGGCCATTGAAAATACTGAAGCAACAATGCTTCCACTTCCATTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR CCA 72 bp | GAGAAGAGTTTCTTCACATTTGACAGGTGGGAAGGATaGGAAACTGGGAAGGCCTCTTGGTTAATCTGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: EKSFFTFDRWEG*ETGKASWLICQ Trigger: TTGACAGATTAACCAAGAGGCCTTCCCAGTTTCCCATCCTTCCCACCTGTCAAATGTGAAGAAACTCTTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR CCA 72 bp | CTCTTGGTTAATCTGTCAAAATCAGTGACTGGTACATaGAACTCTGTAGTGTTGAAGATTCCCATCCCTATG | + |
|
Preference number: 3 (lower is better) Translates to: LLVNLSKSVTGT*NSVVLKIPIPM Trigger: CATAGGGATGGGAATCTTCAACACTACAGAGTTCCATGTACCAGTCACTGATTTTGACAGATTAACCAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR TCA 90 bp | GCCGTACAACTGGACGAGGCTGGCAGTGCCCTTTGCCTCTGGCCAGGGGCACTTCCCCGGTGGTGGCTGTaGTTCGGCAGCCCAAACGGT | + |
|
Preference number: 4 (lower is better) Translates to: AVQLDEAGSALCLWPGALPRWWL*FGSPNG Trigger: ACCGTTTGGGCTGCCGAATCACAGCCACCACCGGGG...AAGTGCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCCTCGTCCAGTTGTACGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR TCA 90 bp | GTGAGCCGTACAACTGGACGAGGCTGGCAGTGCCCTTTGCCTCTGGCCAGGGGCGTAGCCAATGGCCTGTaGGGCCTGCATGGGTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSRTTGRGWQCPLPLARGVANGL*GLHGSH Trigger: GTGGGACCCATGCAGGCCTCACAGGCCATTGGCTAC...GCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCCTCGTCCAGTTGTACGGCTCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR TCA 90 bp | GTGAGCCGTACAACTGGACGAGGCTGGCAGTGCCCTTTGCCTCTGGCCAGGGGCAGTAGTGGCCCAGGATaGCGAGTGATGGTTGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSRTTGRGWQCPLPLARGSSGPG*RVMVER Trigger: CCTTTCAACCATCACTCGTCATCCTGGGCCACTACT...GCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCCTCGTCCAGTTGTACGGCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR CAA 72 bp | GTGAGCCGTACAACTGGACGAGGCTGGCAGTGCCCTTaGCCTCTGGCCAGGGGCACTTGGAATGTGCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSRTTGRGWQCP*PLARGTWNVLQ Trigger: CTGAAGCACATTCCAAGTGCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCCTCGTCCAGTTGTACGGCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR TCA 90 bp | GCCGTACAACTGGACGAGGCTGGCAGTGCCCTTTGCCTCTGGCCAGGGGCACTTACAGAATCCCATAGGTaGAGTAGCGCAGGCTTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AVQLDEAGSALCLWPGALTESHR*SSAGLG Trigger: CCCTAAGCCTGCGCTACTTCACCTATGGGATTCTGT...AAGTGCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCCTCGTCCAGTTGTACGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR CAA 72 bp | AGGCTGGCAGTGCCCTTTGCCTCTGGCCAGGGGCACTaGGAATGTGCTTCAGTAAGACTGTTGCCCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLAVPFASGQGH*ECASVRLLPRA Trigger: GGCTCTGGGCAACAGTCTTACTGAAGCACATTCCAAGTGCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR GCA 90 bp | GGGTGCCGCAGAGTCCTCAGGAGCTTCGATGCAAAACAAGGCTCCTGGTCTCCTTTGGCAGGGCCATCATaGCCAGGAGGTAGCCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: GCRRVLRSFDAKQGSWSPLAGPS*PGGSQW Trigger: CCATTGGCTACCTCCTGGGCATGATGGCCCTGCCAA...AGGAGACCAGGAGCCTTGTTTTGCATCGAAGCTCCTGAGGACTCTGCGGCACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CCA 90 bp | GCCGTACAACTGGACGAGGCTGGCAGTGCCCTTTGCCTCTGGCCAGGGGCACTTTTGGGGTCTGGATCGTaGGACAGCATCTTATCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AVQLDEAGSALCLWPGALLGSGS*DSILSL Trigger: CAAGGATAAGATGCTGTCCCACGATCCAGACCCCAA...AAGTGCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCCTCGTCCAGTTGTACGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR TCA 90 bp | GATGGCAACAAATTCCTCAGCAAACAGAGGCTTAGGTCTGTCTCACTGGGTTCTCCACCTTCGGGAGGCTaGAAGCCACGCGCGGTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DGNKFLSKQRLRSVSLGSPPSGG*KPRAVP Trigger: AGGCACCGCGCGTGGCTTTCAGCCTCCCGAAGGTGG...AGAACCCAGTGAGACAGACCTAAGCCTCTGTTTGCTGAGGAATTTGTTGCCATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR TCA 90 bp | TGTGTGGGGACCATTGTATTCTTTGGAGCCCCTCAGAGCAACCTCATCTTCCTGTGGTGTGGAGGCCAATaGAAGCAACAGCGGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CVGTIVFFGAPQSNLIFLWCGGQ*KQQRPR Trigger: CCGGGGCCGCTGTTGCTTTCATTGGCCTCCACACCA...CAGGAAGATGAGGTTGCTCTGAGGGGCTCCAAAGAATACAATGGTCCCCACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR TCA 90 bp | AACTCATGTGTGGGGACCATTGTATTCTTTGGAGCCCCTCAGAGCAACCTCATCTCCTGGTTTGCCTCCTaGCAGGGCCCCTCAGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: NSCVGTIVFFGAPQSNLISWFAS*QGPSAS Trigger: GGAAGCTGAGGGGCCCTGTCAGGAGGCAAACCAGGA...GATGAGGTTGCTCTGAGGGGCTCCAAAGAATACAATGGTCCCCACACATGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR TCA 90 bp | CCACACTTTCCCAGATTCTGGGAGAAGAGCCTGGCAAGTTTCAAGGCATTCATGGAGACGTCCGAGGCCTaGCGTAGCCCCAATGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: PHFPRFWEKSLASFKAFMETSEA*RSPNAH Trigger: GTGTGCATTGGGGCTACGTCAGGCCTCGGACGTCTC...CATGAATGCCTTGAAACTTGCCAGGCTCTTCTCCCAGAATCTGGGAAAGTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CCA 90 bp | CAAAGAGTTAGAAAGTATATATGGGGGAGGATCCAAAGGCCAGGGGGTGATCCCGGTGTCCTGGGAGCTTaGCAGGAGGGGCCGGTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QRVRKYIWGRIQRPGGDPGVLGA*QEGPVS Trigger: ACTTACCGGCCCCTCCTGCCAAGCTCCCAGGACACC...GGGATCACCCCCTGGCCTTTGGATCCTCCCCCATATATACTTTCTAACTCTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CCA 90 bp | AACTCATGTGTGGGGACCATTGTATTCTTTGGAGCCCCTCAGAGCAACCTCATCCGCTGTCGCAGGGTGTaGGCACCTCTCTTGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSCVGTIVFFGAPQSNLIRCRRV*APLLLG Trigger: CCCAAGCAAGAGAGGTGCCCACACCCTGCGACAGCG...GATGAGGTTGCTCTGAGGGGCTCCAAAGAATACAATGGTCCCCACACATGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR CAA 72 bp | GGCCTTGGGATGACCCTAGCTTGGGGTGGCAAGTTATaGTTGGGTCCAAGTAACAGCCAGGATGCCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLGMTLAWGGKL*LGPSNSQDAWQ Trigger: TTGCCAGGCATCCTGGCTGTTACTTGGACCCAACAATAACTTGCCACCCCAAGCTAGGGTCATCCCAAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR TCA 90 bp | GGGTGCCGCAGAGTCCTCAGGAGCTTCGATGCAAAACAAGGCTCCTGGTCTCCTAGCCCAAACGGTCAGTaGATATACTCACAATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCRRVLRSFDAKQGSWSPSPNGQ*IYSQWE Trigger: CTCCCATTGTGAGTATATTCACTGACCGTTTGGGCT...AGGAGACCAGGAGCCTTGTTTTGCATCGAAGCTCCTGAGGACTCTGCGGCACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR TCA 90 bp | CCTACGTGCAGTTGTTGCCTATGTCATTTGGAGATCCAGGTACAGAATGAGGTTGGCTTAGGGAGCTGGTaGAGGAGCTGGTGTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTCSCCLCHLEIQVQNEVGLGSW*RSWCGG Trigger: GCCTCCACACCAGCTCCTTCACCAGCTCCCTAAGCC...AACCTCATTCTGTACCTGGATCTCCAAATGACATAGGCAACAACTGCACGTAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR TCA 90 bp | CAGAGTCCTCAGGAGCTTCGATGCAAAACAAGGCTCCTGGTCTCCTTTGGCCTTGCCCAGGAGCAGGAATaGGAGGACCTGCAAGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: QSPQELRCKTRLLVSFGLAQEQE*EDLQVY Trigger: ATATACTTGCAGGTCCTCTCATTCCTGCTCCTGGGC...AAGGCCAAAGGAGACCAGGAGCCTTGTTTTGCATCGAAGCTCCTGAGGACTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CCA 90 bp | CCACACTTTCCCAGATTCTGGGAGAAGAGCCTGGCAAGTTTCAAGGCATTCATGATGGAGTCACTGATGTaGCCCGAGACGAGACGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PHFPRFWEKSLASFKAFMMESLM*PETRRP Trigger: CGGACGTCTCGTCTCGGGCCACATCAGTGACTCCAT...CATGAATGCCTTGAAACTTGCCAGGCTCTTCTCCCAGAATCTGGGAAAGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CCA 90 bp | CCACACTTTCCCAGATTCTGGGAGAAGAGCCTGGCAAGTTTCAAGGCATTCATGCCTGTGAGGCCTGCATaGGTCCCACCAGCTCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PHFPRFWEKSLASFKAFMPVRPA*VPPAQM Trigger: CATTTGAGCTGGTGGGACCCATGCAGGCCTCACAGG...CATGAATGCCTTGAAACTTGCCAGGCTCTTCTCCCAGAATCTGGGAAAGTGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CCA 90 bp | CAAAGAGTTAGAAAGTATATATGGGGGAGGATCCAAAGGCCAGGGGGTGATCCCGAAGGAGGCCTGCAATaGGGGGCCCAGCAATCATTG | + |
|
Preference number: 4 (lower is better) Translates to: QRVRKYIWGRIQRPGGDPEGGLQ*GAQQSL Trigger: CAATGATTGCTGGGCCCCCCATTGCAGGCCTCCTTC...GGGATCACCCCCTGGCCTTTGGATCCTCCCCCATATATACTTTCTAACTCTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR GCA 90 bp | CCTACGTGCAGTTGTTGCCTATGTCATTTGGAGATCCAGGTACAGAATGAGGTTTGTGGGCACCTCTCTTaGTTGGGGTGTCCTGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PTCSCCLCHLEIQVQNEVCGHLS*LGCPGS Trigger: GCTCCCAGGACACCCCAAGCAAGAGAGGTGCCCACA...AACCTCATTCTGTACCTGGATCTCCAAATGACATAGGCAACAACTGCACGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CCA 90 bp | GTGCTGCTTTGGCCAAACAACATTCTCTCGGAAAGCACACAAGCCCACACGTGCCAGATACCACACCATTaGCTAGACCTAGGCGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLLWPNNILSESTQAHTCQIPHH*LDLGDV Trigger: AACGTCGCCTAGGTCTAGCCAATGGTGTGGTATCTG...GCACGTGTGGGCTTGTGTGCTTTCCGAGAGAATGTTGTTTGGCCAAAGCAGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CCA 90 bp | GAGAAATGGAAGTGGAAGCATTGTTGCTTCAGTATTTTCAATGGCCTCTCCTGGCCAGGAGGTAGCCAATaGCCTGTGAGGCCTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: EKWKWKHCCFSIFNGLSWPGGSQ*PVRPAW Trigger: CCATGCAGGCCTCACAGGCCATTGGCTACCTCCTGG...CCAGGAGAGGCCATTGAAAATACTGAAGCAACAATGCTTCCACTTCCATTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR CAA 72 bp | CTTGGGATGACCCTAGCTTGGGGTGGCAAGTTATTGTaGGGTCCAAGTAACAGCCAGGATGCCTGGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGMTLAWGGKLL*GPSNSQDAWQK Trigger: TTTTTGCCAGGCATCCTGGCTGTTACTTGGACCCAACAATAACTTGCCACCCCAAGCTAGGGTCATCCCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR GCA 90 bp | CAAAGAGTTAGAAAGTATATATGGGGGAGGATCCAAAGGCCAGGGGGTGATCCCCAACAGAGTTATGGATaGCGAAGATGGAGCCGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: QRVRKYIWGRIQRPGGDPQQSYG*RRWSRC Trigger: GCAACGGCTCCATCTTCGGCATCCATAACTCTGTTG...GGGATCACCCCCTGGCCTTTGGATCCTCCCCCATATATACTTTCTAACTCTTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CCA 90 bp | GATGGCAACAAATTCCTCAGCAAACAGAGGCTTAGGTCTGTCTCACTGGGTTCTCCGACCCATGCTGCTTaGAACTCCACTTGGCGATTT | + |
|
Preference number: 4 (lower is better) Translates to: DGNKFLSKQRLRSVSLGSPTHAA*NSTWRF Trigger: AAATCGCCAAGTGGAGTTCCAAGCAGCATGGGTCGG...AGAACCCAGTGAGACAGACCTAAGCCTCTGTTTGCTGAGGAATTTGTTGCCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR TCA 90 bp | ATGATGGTGGTCCAGAGCCTACTTTTTCTGGCACCTATAATGCCCACTCAGCAGAGGTTTGGGCCAGCTTaGTTTTATCCCCCAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: MMVVQSLLFLAPIMPTQQRFGPA*FYPPAF Trigger: AAATGCTGGGGGATAAAATCAAGCTGGCCCAAACCT...CTGCTGAGTGGGCATTATAGGTGCCAGAAAAAGTAGGCTCTGGACCACCATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR TCA 90 bp | ATGATGGTGGTCCAGAGCCTACTTTTTCTGGCACCTATAATGCCCACTCAGCAGAAGTACTTTCTGAACTaGACCAGAAAGCGCTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: MMVVQSLLFLAPIMPTQQKYFLN*TRKRCR Trigger: GCGACAGCGCTTTCTGGTTCAGTTCAGAAAGTACTT...CTGCTGAGTGGGCATTATAGGTGCCAGAAAAAGTAGGCTCTGGACCACCATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR GCA 90 bp | GATGGCAACAAATTCCTCAGCAAACAGAGGCTTAGGTCTGTCTCACTGGGTTCTTCCCACCAGCTCAAATaGAATGGGAGCCATGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: DGNKFLSKQRLRSVSLGSSHQLK*NGSHDG Trigger: ACCATCATGGCTCCCATTGCATTTGAGCTGGTGGGA...AGAACCCAGTGAGACAGACCTAAGCCTCTGTTTGCTGAGGAATTTGTTGCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CCA 90 bp | GAGAAATGGAAGTGGAAGCATTGTTGCTTCAGTATTTTCAATGGCCTCTCCTGGAGCCGTTGCACCAGGTaGCTGCAAACACCACTATCC | + |
|
Preference number: 4 (lower is better) Translates to: EKWKWKHCCFSIFNGLSWSRCTR*LQTPLS Trigger: GGATAGTGGTGTTTGCAGCCACCTGGTGCAACGGCT...CCAGGAGAGGCCATTGAAAATACTGAAGCAACAATGCTTCCACTTCCATTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CCA 90 bp | ATGATGGTGGTCCAGAGCCTACTTTTTCTGGCACCTATAATGCCCACTCAGCAGATACCAACAGAGTTATaGATGCCGAAGATGGAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: MMVVQSLLFLAPIMPTQQIPTEL*MPKMEP Trigger: CGGCTCCATCTTCGGCATCCATAACTCTGTTGGTAT...CTGCTGAGTGGGCATTATAGGTGCCAGAAAAAGTAGGCTCTGGACCACCATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CCA 90 bp | AACTCATGTGTGGGGACCATTGTATTCTTTGGAGCCCCTCAGAGCAACCTCATCAGCACCTGGAAGGTTTaGGCCAGCTTGATTTTATCC | + |
|
Preference number: 4 (lower is better) Translates to: NSCVGTIVFFGAPQSNLISTWKV*ASLILS Trigger: GGATAAAATCAAGCTGGCCCAAACCTTCCAGGTGCT...GATGAGGTTGCTCTGAGGGGCTCCAAAGAATACAATGGTCCCCACACATGAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CCA 90 bp | CCTACGTGCAGTTGTTGCCTATGTCATTTGGAGATCCAGGTACAGAATGAGGTTAAGGTACTCAGCACCTaGAAGGTTTGGGCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PTCSCCLCHLEIQVQNEVKVLST*KVWASL Trigger: CAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTT...AACCTCATTCTGTACCTGGATCTCCAAATGACATAGGCAACAACTGCACGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR TCA 90 bp | AGGCTGCTTCCTACTCTAAATATTAATACTGTGCTGCTTTGGCCAAACAACATTCAGGGATGGAGTCACTaGTGTGGCCCGAGACGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RLLPTLNINTVLLWPNNIQGWSH*CGPRRD Trigger: GTCTCGTCTCGGGCCACATCAGTGACTCCATCCCTG...AATGTTGTTTGGCCAAAGCAGCACAGTATTAATATTTAGAGTAGGAAGCAGCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGTTCATTTCTTGGCCTGGCCCAGGTGGAAATATTGACCTCTTATGAAAAACTGATATTCCTGGTTTaGCTCCTGACAGGGCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SSSFLGLAQVEILTSYEKLIFLV*LLTGPL Trigger: GAGGGGCCCTGTCAGGAGGCAAACCAGGAATATCAG...TTTTTCATAAGAGGTCAATATTTCCACCTGGGCCAGGCCAAGAAATGAACTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR GCA 90 bp | AGCAGTTCATTTCTTGGCCTGGCCCAGGTGGAAATATTGACCTCTTATGAAAAACGAAGATGGAGCCGTTaGACCAGGTGGCTGCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: SSSFLGLAQVEILTSYEKRRWSR*TRWLQT Trigger: TGTTTGCAGCCACCTGGTGCAACGGCTCCATCTTCG...TTTTTCATAAGAGGTCAATATTTCCACCTGGGCCAGGCCAAGAAATGAACTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR GCA 90 bp | CAGGGGGTGATCCCACACTTTCCCAGATTCTGGGAGAAGAGCCTGGCAAGTTTCAGGAATGAGAGGACCTaGAAGTATATCTTCTTAAGT | + |
|
Preference number: 4 (lower is better) Translates to: QGVIPHFPRFWEKSLASFRNERT*KYIFLS Trigger: ACTTAAGAAGATATACTTGCAGGTCCTCTCATTCCT...GAAACTTGCCAGGCTCTTCTCCCAGAATCTGGGAAAGTGTGGGATCACCCCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CCA 90 bp | AGGCTGCTTCCTACTCTAAATATTAATACTGTGCTGCTTTGGCCAAACAACATTAGGTGTTGGGGAGCCTaGCAGCAGTTCTCCGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLLPTLNINTVLLWPNNIRCWGA*QQFSVG Trigger: CCCAACGGAGAACTGCTGCCAGGCTCCCCAACACCT...AATGTTGTTTGGCCAAAGCAGCACAGTATTAATATTTAGAGTAGGAAGCAGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR GCA 90 bp | AGGCTGCTTCCTACTCTAAATATTAATACTGTGCTGCTTTGGCCAAACAACATTGTGGGCTCGGGTTCTTaGACTGGCTCAGCCTCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RLLPTLNINTVLLWPNNIVGSGS*TGSASK Trigger: CTTTGAGGCTGAGCCAGTGCAAGAACCCGAGCCCAC...AATGTTGTTTGGCCAAAGCAGCACAGTATTAATATTTAGAGTAGGAAGCAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CCA 90 bp | GAGAAATGGAAGTGGAAGCATTGTTGCTTCAGTATTTTCAATGGCCTCTCCTGGCCTCCTCTAGTAGCATaGAGTAGAGGATACCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: EKWKWKHCCFSIFNGLSWPPLVA*SRGYQQ Trigger: CTGTTGGTATCCTCTACTCCATGCTACTAGAGGAGG...CCAGGAGAGGCCATTGAAAATACTGAAGCAACAATGCTTCCACTTCCATTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CCA 90 bp | AGCAGTTCATTTCTTGGCCTGGCCCAGGTGGAAATATTGACCTCTTATGAAAAAATAGGGGGATCATCATaGACATCAAGCCCAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSFLGLAQVEILTSYEKIGGSS*TSSPGA Trigger: TGCTCCTGGGCTTGATGTCCATGATGATCCCCCTAT...TTTTTCATAAGAGGTCAATATTTCCACCTGGGCCAGGCCAAGAAATGAACTGCT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| 3UTR CAA 72 bp | TTCAAGGCATTCATGGGGAGAATTTGGTTAATGAGTTaGGAACACCGAGAGCATTGGCTCAGAGGAGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: FKAFMGRIWLMS*EHREHWLRGDG Trigger: ACCATCTCCTCTGAGCCAATGCTCTCGGTGTTCCAAACTCATTAACCAAATTCTCCCCATGAATGCCTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR GCA 90 bp | CCTACGTGCAGTTGTTGCCTATGTCATTTGGAGATCCAGGTACAGAATGAGGTTACAGCATCTTATCCTTaGTGGAATCTCTCTGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PTCSCCLCHLEIQVQNEVTASYP*WNLSAL Trigger: AAGAGCAGAGAGATTCCAGCAAGGATAAGATGCTGT...AACCTCATTCTGTACCTGGATCTCCAAATGACATAGGCAACAACTGCACGTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CCA 90 bp | AGGCTGCTTCCTACTCTAAATATTAATACTGTGCTGCTTTGGCCAAACAACATTGGAAGGGAAAAGACATaGAGAAGATGCTACTTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RLLPTLNINTVLLWPNNIGREKT*RRCYFQ Trigger: CTGGAAGTAGCATCTTCTCCATGTCTTTTCCCTTCC...AATGTTGTTTGGCCAAAGCAGCACAGTATTAATATTTAGAGTAGGAAGCAGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS GCA 90 bp | CGCGCGGTGCCTCGGGTTTCCACAGTGGGCGTGGGCTCGGGTTCTTaGACTGGCTCAGCCTCAAAGCCCAGCTCCGGCAGGGGTGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RAVPRVSTVGVGSGS*TGSASKPSSGRGAG Trigger: TCCTGCACCCCTGCCGGAGCTGGGCTTTGAGGCTGAGCCAGTGCAAGAACCCGAGCCCACGCCCACTGTGGAAACCCGAGGCACCGCGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS CCA 90 bp | GGTGCCTCGGGTTTCCACAGTGGGCGTGGGCTCGGGTTCTTGCACTaGCTCAGCCTCAAAGCCCAGCTCCGGCAGGGGTGCAGGATCGGG | + |
|
Preference number: 5 (lower is better) Translates to: GASGFHSGRGLGFLH*LSLKAQLRQGCRIG Trigger: CCCGATCCTGCACCCCTGCCGGAGCTGGGCTTTGAGGCTGAGCCAGTGCAAGAACCCGAGCCCACGCCCACTGTGGAAACCCGAGGCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS TCA 90 bp | GTGGCTGCAAACACCACTATCCAGCCGAAGCCACCTTCGGGAGGCTaGAAGCCACGCGCGGTGCCTCGGGTTTCCACAGTGGGCGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VAANTTIQPKPPSGG*KPRAVPRVSTVGVG Trigger: GCCCACGCCCACTGTGGAAACCCGAGGCACCGCGCGTGGCTTTCAGCCTCCCGAAGGTGGCTTCGGCTGGATAGTGGTGTTTGCAGCCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS GCA 90 bp | CTATCCAGCCGAAGCCACCTTCGGGAGGCTGAAAGCCACGCGCGGTaGCTCGGGTTTCCACAGTGGGCGTGGGCTCGGGTTCTTGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: LSSRSHLREAESHAR*LGFPQWAWARVLAL Trigger: CAGTGCAAGAACCCGAGCCCACGCCCACTGTGGAAACCCGAGGCACCGCGCGTGGCTTTCAGCCTCCCGAAGGTGGCTTCGGCTGGATAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CAA 90 bp | GTGAGCCGTACAACTGGACGAGGCTGGCAGTGCCCTTTGCCTCTGGCCAGGGGCCCGAAGATGGAGCCGTaGCACCAGGTGGCTGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VSRTTGRGWQCPLPLARGPKMEP*HQVAAN Trigger: GTTTGCAGCCACCTGGTGCAACGGCTCCATCTTCGG...GCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCCTCGTCCAGTTGTACGGCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CAA 90 bp | GTGAGCCGTACAACTGGACGAGGCTGGCAGTGCCCTTTGCCTCTGGCCAGGGGCTGGGCTCTTCAGGTGTaGGGGAGCCTGGCAGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VSRTTGRGWQCPLPLARGWALQV*GSLAAV Trigger: AACTGCTGCCAGGCTCCCCAACACCTGAAGAGCCCA...GCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCCTCGTCCAGTTGTACGGCTCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CAA 90 bp | GTGAGCCGTACAACTGGACGAGGCTGGCAGTGCCCTTTGCCTCTGGCCAGGGGCTCCGACCCATGCTGCTaGGAACTCCACTTGGCGATT | + |
|
Preference number: 5 (lower is better) Translates to: VSRTTGRGWQCPLPLARGSDPCC*ELHLAI Trigger: AATCGCCAAGTGGAGTTCCAAGCAGCATGGGTCGGA...GCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCCTCGTCCAGTTGTACGGCTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS TCA 90 bp | AGGGATGGAGTCACTGATGTGGCCCGAGACGAGACGTCCGAGGCCTaGCGTAGCCCCAATGCACACCAAGAGCACCCAGGTCTCCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RDGVTDVARDETSEA*RSPNAHQEHPGLLD Trigger: ATCAAGGAGACCTGGGTGCTCTTGGTGTGCATTGGGGCTACGTCAGGCCTCGGACGTCTCGTCTCGGGCCACATCAGTGACTCCATCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CAA 90 bp | GTGAGCCGTACAACTGGACGAGGCTGGCAGTGCCCTTTGCCTCTGGCCAGGGGCAAGGTTTGGGCCAGCTaGATTTTATCCCCCAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: VSRTTGRGWQCPLPLARGKVWAS*ILSPSI Trigger: AATGCTGGGGGATAAAATCAAGCTGGCCCAAACCTT...GCCCCTGGCCAGAGGCAAAGGGCACTGCCAGCCTCGTCCAGTTGTACGGCTCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS TCA 90 bp | AATCATTGGCAGGGCCATCATGCCCAGGAGGTAGCCAATGGCCTGTaGGGCCTGCATGGGTCCCACCAGCTCAAATGCAATGGGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NHWQGHHAQEVANGL*GLHGSHQLKCNGSH Trigger: ATGGCTCCCATTGCATTTGAGCTGGTGGGACCCATGCAGGCCTCACAGGCCATTGGCTACCTCCTGGGCATGATGGCCCTGCCAATGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS CCA 90 bp | CTCTTCAGGTGTTGGGGAGCCTGGCAGCAGTTCTCCGTTGGGGTCTaGATCGTGGGACAGCATCTTATCCTTGCTGGAATCTCTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LFRCWGAWQQFSVGV*IVGQHLILAGISLL Trigger: GAGCAGAGAGATTCCAGCAAGGATAAGATGCTGTCCCACGATCCAGACCCCAACGGAGAACTGCTGCCAGGCTCCCCAACACCTGAAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CAA 90 bp | TGTGTGGGGACCATTGTATTCTTTGGAGCCCCTCAGAGCAACCTCATCTTCCTGGGGGCCCAGCAATCATaGGCAGGGCCATCATGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: CVGTIVFFGAPQSNLIFLGAQQS*AGPSCP Trigger: TGGGCATGATGGCCCTGCCAATGATTGCTGGGCCCC...CAGGAAGATGAGGTTGCTCTGAGGGGCTCCAAAGAATACAATGGTCCCCACACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS CCA 90 bp | ACCTGCAAGTATATCTTCTTAAGTCCAGGGATGGAGTCACTGATGTaGCCCGAGACGAGACGTCCGAGGCCTGACGTAGCCCCAATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: TCKYIFLSPGMESLM*PETRRPRPDVAPMH Trigger: GTGCATTGGGGCTACGTCAGGCCTCGGACGTCTCGTCTCGGGCCACATCAGTGACTCCATCCCTGGACTTAAGAAGATATACTTGCAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS CCA 90 bp | AAATGGGCTCTTCAGGTGTTGGGGAGCCTGGCAGCAGTTCTCCGTTaGGGTCTGGATCGTGGGACAGCATCTTATCCTTGCTGGAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: KWALQVLGSLAAVLR*GLDRGTASYPCWNL Trigger: GAGATTCCAGCAAGGATAAGATGCTGTCCCACGATCCAGACCCCAACGGAGAACTGCTGCCAGGCTCCCCAACACCTGAAGAGCCCATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CAA 90 bp | CAGGGGGTGATCCCACACTTTCCCAGATTCTGGGAGAAGAGCCTGGCAAGTTTCGCAGATACCACACCATaGGCTAGACCTAGGCGACGT | + |
|
Preference number: 5 (lower is better) Translates to: QGVIPHFPRFWEKSLASFADTTP*ARPRRR Trigger: ACGTCGCCTAGGTCTAGCCAATGGTGTGGTATCTGC...GAAACTTGCCAGGCTCTTCTCCCAGAATCTGGGAAAGTGTGGGATCACCCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CAA 90 bp | GATGGCAACAAATTCCTCAGCAAACAGAGGCTTAGGTCTGTCTCACTGGGTTCTGGGCACCTCTCTTGCTaGGGGTGTCCTGGGAGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DGNKFLSKQRLRSVSLGSGHLSC*GCPGSL Trigger: CAAGCTCCCAGGACACCCCAAGCAAGAGAGGTGCCC...AGAACCCAGTGAGACAGACCTAAGCCTCTGTTTGCTGAGGAATTTGTTGCCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS TCA 90 bp | CACCATTGGCTAGACCTAGGCGACGTTGAAAGTAGTGGCCCAGGATaGCGAGTGATGGTTGAAAGGCGAATGAGCAGCCACAACCAAACA | + |
|
Preference number: 5 (lower is better) Translates to: HHWLDLGDVESSGPG*RVMVERRMSSHNQT Trigger: TGTTTGGTTGTGGCTGCTCATTCGCCTTTCAACCATCACTCGTCATCCTGGGCCACTACTTTCAACGTCGCCTAGGTCTAGCCAATGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS GCA 90 bp | CCTCCTCTAGTAGCATGGAGTAGAGGATACCAACAGAGTTATGGATaGCGAAGATGGAGCCGTTGCACCAGGTGGCTGCAAACACCACTA | + |
|
Preference number: 5 (lower is better) Translates to: PPLVAWSRGYQQSYG*RRWSRCTRWLQTPL Trigger: TAGTGGTGTTTGCAGCCACCTGGTGCAACGGCTCCATCTTCGGCATCCATAACTCTGTTGGTATCCTCTACTCCATGCTACTAGAGGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS CCA 90 bp | TTGATGCATCAGAGGGACGAAGAAAAGGATCACAGCTCCAATGATTaGGGGGACACCCGCAAAGTAGAAGGCCACATGGTAATCACCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LMHQRDEEKDHSSND*GDTRKVEGHMVITK Trigger: TTTGGTGATTACCATGTGGCCTTCTACTTTGCGGGTGTCCCCCCAATCATTGGAGCTGTGATCCTTTTCTTCGTCCCTCTGATGCATCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CAA 90 bp | ATGATGGTGGTCCAGAGCCTACTTTTTCTGGCACCTATAATGCCCACTCAGCAGGACAGCATCTTATCCTaGCTGGAATCTCTCTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: MMVVQSLLFLAPIMPTQQDSILS*LESLCS Trigger: AGAGCAGAGAGATTCCAGCAAGGATAAGATGCTGTC...CTGCTGAGTGGGCATTATAGGTGCCAGAAAAAGTAGGCTCTGGACCACCATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CAA 90 bp | TGTGTGGGGACCATTGTATTCTTTGGAGCCCCTCAGAGCAACCTCATCTTCCTGTGCTTGGAACTCCACTaGGCGATTTTTCTCTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: CVGTIVFFGAPQSNLIFLCLELH*AIFLFF Trigger: GAAAAAGAGAAAAATCGCCAAGTGGAGTTCCAAGCA...CAGGAAGATGAGGTTGCTCTGAGGGGCTCCAAAGAATACAATGGTCCCCACACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CAA 90 bp | AGTAACAGCCAGGATGCCTGGCAAAAAGATGATAAAAGGTTGGTACAGGAACACAGCACCCAGGTCTCCTaGATCTCCTTGAACTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: SNSQDAWQKDDKRLVQEHSTQVS*ISLNLS Trigger: AGATAAGTTCAAGGAGATCAAGGAGACCTGGGTGCT...GTGTTCCTGTACCAACCTTTTATCATCTTTTTGCCAGGCATCCTGGCTGTTACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CAA 90 bp | AGCAGTTCATTTCTTGGCCTGGCCCAGGTGGAAATATTGACCTCTTATGAAAAATTATCCCCCAGCATTTaGATGAGGAAGGGAAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSSFLGLAQVEILTSYEKLSPSI*MRKGKD Trigger: GTCTTTTCCCTTCCTCATCAAAATGCTGGGGGATAA...TTTTTCATAAGAGGTCAATATTTCCACCTGGGCCAGGCCAAGAAATGAACTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CAA 90 bp | AGGCTGCTTCCTACTCTAAATATTAATACTGTGCTGCTTTGGCCAAACAACATTCAGCACCTGGAAGGTTaGGGCCAGCTTGATTTTATC | + |
|
Preference number: 5 (lower is better) Translates to: RLLPTLNINTVLLWPNNIQHLEG*GQLDFI Trigger: GATAAAATCAAGCTGGCCCAAACCTTCCAGGTGCTG...AATGTTGTTTGGCCAAAGCAGCACAGTATTAATATTTAGAGTAGGAAGCAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CAA 90 bp | AATTTGGTTAATGAGTTTGGAACACCGAGAGCATTGGCTCAGAGGAGATGGTCAGTCTCCTTGATCTCCTaGAACTTATCTTCCACATAT | + |
|
Preference number: 5 (lower is better) Translates to: NLVNEFGTPRALAQRRWSVSLIS*NLSSTY Trigger: ATATGTGGAAGATAAGTTCAAGGAGATCAAGGAGAC...TGACCATCTCCTCTGAGCCAATGCTCTCGGTGTTCCAAACTCATTAACCAAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS-3UTR CAA 90 bp | GAGAAATGGAAGTGGAAGCATTGTTGCTTCAGTATTTTCAATGGCCTCTCCTGGTTTCTTAAACATCCTTaGATGCATCAGAGGGACGAA | + |
|
Preference number: 5 (lower is better) Translates to: EKWKWKHCCFSIFNGLSWFLKHP*MHQRDE Trigger: TTCGTCCCTCTGATGCATCAAAGGATGTTTAAGAAA...CCAGGAGAGGCCATTGAAAATACTGAAGCAACAATGCTTCCACTTCCATTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS CCA 72 bp | GGGCTCGGGCTCAGGCTGAGGCTCGGGCGGGGGCACTaGCACCGGCTCGGGGTCAGGCTCCGGTTCGGGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GLGLRLRLGRGH*HRLGVRLRFGL Trigger: GAGCCCGAACCGGAGCCTGACCCCGAGCCGGTGCCAGTGCCCCCGCCCGAGCCTCAGCCTGAGCCCGAGCCC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS CAA 90 bp | ACGCGCGGTGCCTCGGGTTTCCACAGTGGGCGTGGGCTCGGGTTCTaGCACTGGCTCAGCCTCAAAGCCCAGCTCCGGCAGGGGTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: TRGASGFHSGRGLGF*HWLSLKAQLRQGCR Trigger: CCTGCACCCCTGCCGGAGCTGGGCTTTGAGGCTGAGCCAGTGCAAGAACCCGAGCCCACGCCCACTGTGGAAACCCGAGGCACCGCGCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
||
| CDS GCA 72 bp | CGAAGCCACCTTCGGGAGGCTGAAAGCCACGCGCGGTaGCTCGGGTTTCCACAGTGGGCGTGGGCTCGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RSHLREAESHAR*LGFPQWAWARV Trigger: AACCCGAGCCCACGCCCACTGTGGAAACCCGAGGCACCGCGCGTGGCTTTCAGCCTCCCGAAGGTGGCTTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS GCA 72 bp | CCTCGGGTTTCCACAGTGGGCGTGGGCTCGGGTTCTTaGACTGGCTCAGCCTCAAAGCCCAGCTCCGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: PRVSTVGVGSGS*TGSASKPSSGR Trigger: CCTGCCGGAGCTGGGCTTTGAGGCTGAGCCAGTGCAAGAACCCGAGCCCACGCCCACTGTGGAAACCCGAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS GCA 72 bp | CCAGAAAGCGCTGTCGCAGGGTGTGGGCACCTCTCTTaGTTGGGGTGTCCTGGGAGCTTGGCAGGAGGGGCC | + |
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Preference number: 6 (lower is better) Translates to: PESAVAGCGHLS*LGCPGSLAGGA Trigger: GGCCCCTCCTGCCAAGCTCCCAGGACACCCCAAGCAAGAGAGGTGCCCACACCCTGCGACAGCGCTTTCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS CCA 72 bp | GGTTTCCACAGTGGGCGTGGGCTCGGGTTCTTGCACTaGCTCAGCCTCAAAGCCCAGCTCCGGCAGGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: GFHSGRGLGFLH*LSLKAQLRQGC Trigger: GCACCCCTGCCGGAGCTGGGCTTTGAGGCTGAGCCAGTGCAAGAACCCGAGCCCACGCCCACTGTGGAAACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS CCA 72 bp | GCTGAAAGCCACGCGCGGTGCCTCGGGTTTCCACAGTaGGCGTGGGCTCGGGTTCTTGCACTGGCTCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: AESHARCLGFPQ*AWARVLALAQP Trigger: AGGCTGAGCCAGTGCAAGAACCCGAGCCCACGCCCACTGTGGAAACCCGAGGCACCGCGCGTGGCTTTCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS CAA 72 bp | GAAAGCGCTGTCGCAGGGTGTGGGCACCTCTCTTGCTaGGGGTGTCCTGGGAGCTTGGCAGGAGGGGCCGGT | + |
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Preference number: 6 (lower is better) Translates to: ESAVAGCGHLSC*GCPGSLAGGAG Trigger: ACCGGCCCCTCCTGCCAAGCTCCCAGGACACCCCAAGCAAGAGAGGTGCCCACACCCTGCGACAGCGCTTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS CAA 90 bp | CCGGCTCGGGCACAGGACTACACACCGGCTCCTGATATTCCTGGTTaGCCTCCTGACAGGGCCCCTCAGCTTCCTCGCTCGCCGGGCTTG | + |
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Preference number: 6 (lower is better) Translates to: PARAQDYTPAPDIPG*PPDRAPQLPRSPGL Trigger: CAAGCCCGGCGAGCGAGGAAGCTGAGGGGCCCTGTCAGGAGGCAAACCAGGAATATCAGGAGCCGGTGTGTAGTCCTGTGCCCGAGCCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS CCA 72 bp | AAAGCGCTGTCGCAGGGTGTGGGCACCTCTCTTGCTTaGGGTGTCCTGGGAGCTTGGCAGGAGGGGCCGGTA | + |
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Preference number: 6 (lower is better) Translates to: KALSQGVGTSLA*GVLGAWQEGPV Trigger: TACCGGCCCCTCCTGCCAAGCTCCCAGGACACCCCAAGCAAGAGAGGTGCCCACACCCTGCGACAGCGCTTT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS TCA 72 bp | AACACCACTATCCAGCCGAAGCCACCTTCGGGAGGCTaGAAGCCACGCGCGGTGCCTCGGGTTTCCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: NTTIQPKPPSGG*KPRAVPRVSTV Trigger: CACTGTGGAAACCCGAGGCACCGCGCGTGGCTTTCAGCCTCCCGAAGGTGGCTTCGGCTGGATAGTGGTGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS TCA 72 bp | GTCACTGATGTGGCCCGAGACGAGACGTCCGAGGCCTaGCGTAGCCCCAATGCACACCAAGAGCACCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: VTDVARDETSEA*RSPNAHQEHPG Trigger: ACCTGGGTGCTCTTGGTGTGCATTGGGGCTACGTCAGGCCTCGGACGTCTCGTCTCGGGCCACATCAGTGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS CAA 72 bp | GCACAGGACTACACACCGGCTCCTGATATTCCTGGTTaGCCTCCTGACAGGGCCCCTCAGCTTCCTCGCTCG | + |
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Preference number: 6 (lower is better) Translates to: AQDYTPAPDIPG*PPDRAPQLPRS Trigger: CGAGCGAGGAAGCTGAGGGGCCCTGTCAGGAGGCAAACCAGGAATATCAGGAGCCGGTGTGTAGTCCTGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS CCA 72 bp | CTTCAGGTGTTGGGGAGCCTGGCAGCAGTTCTCCGTTaGGGTCTGGATCGTGGGACAGCATCTTATCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: LQVLGSLAAVLR*GLDRGTASYPC Trigger: GCAAGGATAAGATGCTGTCCCACGATCCAGACCCCAACGGAGAACTGCTGCCAGGCTCCCCAACACCTGAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS TCA 72 bp | GTCCTGGGAGCTTGGCAGGAGGGGCCGGTAAGTGAGTaGGAGCAGCGTAAGGACAAACATGAAGGTACTCAG | + |
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Preference number: 6 (lower is better) Translates to: VLGAWQEGPVSE*EQRKDKHEGTQ Trigger: CTGAGTACCTTCATGTTTGTCCTTACGCTGCTCTCACTCACTTACCGGCCCCTCCTGCCAAGCTCCCAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS CCA 72 bp | GGTAATCACCAAAGCAGTTTCGAAGGAGGCCTGCAATaGGGGGCCCAGCAATCATTGGCAGGGCCATCATGC | + |
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Preference number: 6 (lower is better) Translates to: GNHQSSFEGGLQ*GAQQSLAGPSC Trigger: GCATGATGGCCCTGCCAATGATTGCTGGGCCCCCCATTGCAGGCCTCCTTCGAAACTGCTTTGGTGATTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS CCA 72 bp | GAGCCTGGCAGCAGTTCTCCGTTGGGGTCTGGATCGTaGGACAGCATCTTATCCTTGCTGGAATCTCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: EPGSSSPLGSGS*DSILSLLESLC Trigger: GCAGAGAGATTCCAGCAAGGATAAGATGCTGTCCCACGATCCAGACCCCAACGGAGAACTGCTGCCAGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS CCA 72 bp | TGTTGGGGAGCCTGGCAGCAGTTCTCCGTTGGGGTCTaGATCGTGGGACAGCATCTTATCCTTGCTGGAATC | + |
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Preference number: 6 (lower is better) Translates to: CWGAWQQFSVGV*IVGQHLILAGI Trigger: GATTCCAGCAAGGATAAGATGCTGTCCCACGATCCAGACCCCAACGGAGAACTGCTGCCAGGCTCCCCAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS CAA 72 bp | TCTTCAGGTGTTGGGGAGCCTGGCAGCAGTTCTCCGTaGGGGTCTGGATCGTGGGACAGCATCTTATCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SSGVGEPGSSSP*GSGSWDSILSL Trigger: CAAGGATAAGATGCTGTCCCACGATCCAGACCCCAACGGAGAACTGCTGCCAGGCTCCCCAACACCTGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS CCA 72 bp | TATATCTTCTTAAGTCCAGGGATGGAGTCACTGATGTaGCCCGAGACGAGACGTCCGAGGCCTGACGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: YIFLSPGMESLM*PETRRPRPDVA Trigger: GGCTACGTCAGGCCTCGGACGTCTCGTCTCGGGCCACATCAGTGACTCCATCCCTGGACTTAAGAAGATATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS TCA 72 bp | CTAGACCTAGGCGACGTTGAAAGTAGTGGCCCAGGATaGCGAGTGATGGTTGAAAGGCGAATGAGCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LDLGDVESSGPG*RVMVERRMSSH Trigger: GTGGCTGCTCATTCGCCTTTCAACCATCACTCGTCATCCTGGGCCACTACTTTCAACGTCGCCTAGGTCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS TCA 72 bp | TGGCGGAATACACGCATGTTGAAGTACTTTCTGAACTaGACCAGAAAGCGCTGTCGCAGGGTGTGGGCACCT | + |
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Preference number: 6 (lower is better) Translates to: WRNTRMLKYFLN*TRKRCRRVWAP Trigger: AGGTGCCCACACCCTGCGACAGCGCTTTCTGGTTCAGTTCAGAAAGTACTTCAACATGCGTGTATTCCGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS GCA 72 bp | GTAGCATGGAGTAGAGGATACCAACAGAGTTATGGATaGCGAAGATGGAGCCGTTGCACCAGGTGGCTGCAA | + |
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Preference number: 6 (lower is better) Translates to: VAWSRGYQQSYG*RRWSRCTRWLQ Trigger: TTGCAGCCACCTGGTGCAACGGCTCCATCTTCGGCATCCATAACTCTGTTGGTATCCTCTACTCCATGCTAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS CCA 72 bp | CAGAGGGACGAAGAAAAGGATCACAGCTCCAATGATTaGGGGGACACCCGCAAAGTAGAAGGCCACATGGTA | + |
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Preference number: 6 (lower is better) Translates to: QRDEEKDHSSND*GDTRKVEGHMV Trigger: TACCATGTGGCCTTCTACTTTGCGGGTGTCCCCCCAATCATTGGAGCTGTGATCCTTTTCTTCGTCCCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS CCA 72 bp | TGGAGAAGATGCTACTTCCAGCAGATACCACACCATTaGCTAGACCTAGGCGACGTTGAAAGTAGTGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: WRRCYFQQIPHH*LDLGDVESSGP Trigger: TGGGCCACTACTTTCAACGTCGCCTAGGTCTAGCCAATGGTGTGGTATCTGCTGGAAGTAGCATCTTCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS CCA 72 bp | AGCAGCGTAAGGACAAACATGAAGGTACTCAGCACCTaGAAGGTTTGGGCCAGCTTGATTTTATCCCCCAGC | + |
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Preference number: 6 (lower is better) Translates to: SSVRTNMKVLST*KVWASLILSPS Trigger: GCTGGGGGATAAAATCAAGCTGGCCCAAACCTTCCAGGTGCTGAGTACCTTCATGTTTGTCCTTACGCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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| CDS CAA 72 bp | CCGTTGGGGTCTGGATCGTGGGACAGCATCTTATCCTaGCTGGAATCTCTCTGCTCTTTCTTAAACATCCTT | + |
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Preference number: 6 (lower is better) Translates to: PLGSGSWDSILS*LESLCSFLNIL Trigger: AAGGATGTTTAAGAAAGAGCAGAGAGATTCCAGCAAGGATAAGATGCTGTCCCACGATCCAGACCCCAACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042664.10 |
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