Pregenerated sensors for SLC16A13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044367Ensembl transcript IDs: ENSMUST00000060010.3, ENSMUST00000141290.2, ENSMUST00000159867.2, ENSMUST00000190533.2
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGATGAGTGGACAGGAGGGAGGAACTCTGGGTCACCAGAGTTCATaGACATCTCCACTCCTTGGCTCAGCCATGGCCCTATTAGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: GMSGQEGGTLGHQSS*TSPLLGSAMALLAA Trigger: GGCAGCTAATAGGGCCATGGCTGAGCCAAGGAGTGGAGATGTCCATGAACTCTGGTGACCCAGAGTTCCTCCCTCCTGTCCACTCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR GCA 90 bp | GAGGAGAATCCTAGCAAGAATCCTAAGGCACTGTACTTCTGTAGATaGCGTGGTGAGGCCAAAGACCTGGCACCACCAAGCTGTTTCCAT | + |
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Preference number: 1 (lower is better) Translates to: EENPSKNPKALYFCR*RGEAKDLAPPSCFH Trigger: ATGGAAACAGCTTGGTGGTGCCAGGTCTTTGGCCTCACCACGGCATCTACAGAAGTACAGTGCCTTAGGATTCTTGCTAGGATTCTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR GCA 90 bp | CTTGTTAGCCTAGGAGGAACAAAGATCCATCTGGGTAAGGCTGTGTaGACCTGTGATCCTAGTACTTGGGAGGAGGCCAGTTCTCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: LVSLGGTKIHLGKAV*TCDPSTWEEASSQV Trigger: AACTTGAGAACTGGCCTCCTCCCAAGTACTAGGATCACAGGTGCACACAGCCTTACCCAGATGGATCTTTGTTCCTCCTAGGCTAACAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR TCA 90 bp | ACATATAAAAACATGAGGAGATTCTTGCCCTTTGACTTTCAGATTTaGTTCAGAACTCAGTGGAGTGGGATCTCCTGGAGCCTTCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: TYKNMRRFLPFDFQI*FRTQWSGISWSLQR Trigger: TCTCTGAAGGCTCCAGGAGATCCCACTCCACTGAGTTCTGAATCAAATCTGAAAGTCAAAGGGCAAGAATCTCCTCATGTTTTTATATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR TCA 90 bp | ACTTGTTTGATATACAAGGGACACCAGCTAGCACATATAAAAACATaGGGAGATTCTTGCCCTTTGACTTTCAGATTTGATTCAGAACTC | + |
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Preference number: 1 (lower is better) Translates to: TCLIYKGHQLAHIKT*GDSCPLTFRFDSEL Trigger: GAGTTCTGAATCAAATCTGAAAGTCAAAGGGCAAGAATCTCCTCATGTTTTTATATGTGCTAGCTGGTGTCCCTTGTATATCAAACAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR CAA 90 bp | GGGAGAGCAAAGGCGATAGGTGAGTCCTCAACAGAACATGAACAGTaGGCACATAAACTGCAGGAACCCTGGGCCTGCTCTGGAGGAGAA | + |
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Preference number: 2 (lower is better) Translates to: GRAKAIGESSTEHEQ*AHKLQEPWACSGGE Trigger: TTCTCCTCCAGAGCAGGCCCAGGGTTCCTGCAGTTTATGTGCCAACTGTTCATGTTCTGTTGAGGACTCACCTATCGCCTTTGCTCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGAACCACTTAGTCTGACGCTCTGGCATACTGGAAGAGCAGGAAGTGCTCTTTGGAGTGGGATCTCCTaGAGCCTTCAGAGAAGCTCG | + |
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Preference number: 2 (lower is better) Translates to: CEPLSLTLWHTGRAGSALWSGIS*SLQRSS Trigger: CGAGCTTCTCTGAAGGCTCCAGGAGATCCCACTCCA...AAGAGCACTTCCTGCTCTTCCAGTATGCCAGAGCGTCAGACTAAGTGGTTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR-3UTR CCA 90 bp | TGTGAACCACTTAGTCTGACGCTCTGGCATACTGGAAGAGCAGGAAGTGCTCTTCAGAACTCAGTGGAGTaGGATCTCCTGGAGCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: CEPLSLTLWHTGRAGSALQNSVE*DLLEPS Trigger: TGAAGGCTCCAGGAGATCCCACTCCACTGAGTTCTG...AAGAGCACTTCCTGCTCTTCCAGTATGCCAGAGCGTCAGACTAAGTGGTTCACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR-3UTR GCA 90 bp | CCTGTCTCTGAAAAATTTCCCTGTGTCACAGGAATAGTGGAGAAGAGGGGGATGAGTTGGCACATAAACTaGAGGAACCCTGGGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: PVSEKFPCVTGIVEKRGMSWHIN*RNPGPA Trigger: AGCAGGCCCAGGGTTCCTGCAGTTTATGTGCCAACT...CATCCCCCTCTTCTCCACTATTCCTGTGACACAGGGAAATTTTTCAGAGACAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGTCTCTGAAAAATTTCCCTGTGTCACAGGAATAGTGGAGAAGAGGGGGATGGTTCTCTTACTTGTTTaGTATACAAGGGACACCAGC | + |
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Preference number: 2 (lower is better) Translates to: PVSEKFPCVTGIVEKRGMVLLLV*YTRDTS Trigger: GCTGGTGTCCCTTGTATATCAAACAAGTAAGAGAAC...CATCCCCCTCTTCTCCACTATTCCTGTGACACAGGGAAATTTTTCAGAGACAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR-3UTR TCA 90 bp | CCTGTCTCTGAAAAATTTCCCTGTGTCACAGGAATAGTGGAGAAGAGGGGGATGGCACATATAAAAACATaGGGAGATTCTTGCCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: PVSEKFPCVTGIVEKRGMAHIKT*GDSCPL Trigger: CAAAGGGCAAGAATCTCCTCATGTTTTTATATGTGC...CATCCCCCTCTTCTCCACTATTCCTGTGACACAGGGAAATTTTTCAGAGACAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR-3UTR TCA 90 bp | GCTTTATCAGTTCCAGTCTCTGCTCTCAAGCCACCTTCTTCCATACATAGGCCTTTTGACTTTCAGATTTaGTTCAGAACTCAGTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: ALSVPVSALKPPSSIHRPFDFQI*FRTQWS Trigger: ACTCCACTGAGTTCTGAATCAAATCTGAAAGTCAAA...AGGCCTATGTATGGAAGAAGGTGGCTTGAGAGCAGAGACTGGAACTGATAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR CCA 72 bp | GGACAGGAGGGAGGAACTCTGGGTCACCAGAGTTCATaGACATCTCCACTCCTTGGCTCAGCCATGGCCCTA | + |
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Preference number: 3 (lower is better) Translates to: GQEGGTLGHQSS*TSPLLGSAMAL Trigger: TAGGGCCATGGCTGAGCCAAGGAGTGGAGATGTCCATGAACTCTGGTGACCCAGAGTTCCTCCCTCCTGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR CCA 72 bp | TCTGGGTCACCAGAGTTCATGGACATCTCCACTCCTTaGCTCAGCCATGGCCCTATTAGCTGCCCCAAGCAC | + |
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Preference number: 3 (lower is better) Translates to: SGSPEFMDISTP*LSHGPISCPKH Trigger: GTGCTTGGGGCAGCTAATAGGGCCATGGCTGAGCCAAGGAGTGGAGATGTCCATGAACTCTGGTGACCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR GCA 72 bp | CCTAGCAAGAATCCTAAGGCACTGTACTTCTGTAGATaGCGTGGTGAGGCCAAAGACCTGGCACCACCAAGC | + |
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Preference number: 3 (lower is better) Translates to: PSKNPKALYFCR*RGEAKDLAPPS Trigger: GCTTGGTGGTGCCAGGTCTTTGGCCTCACCACGGCATCTACAGAAGTACAGTGCCTTAGGATTCTTGCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR CCA 72 bp | TGTACTTCTGTAGATGCCGTGGTGAGGCCAAAGACCTaGCACCACCAAGCTGTTTCCATGACACTGCTCTCG | + |
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Preference number: 3 (lower is better) Translates to: CTSVDAVVRPKT*HHQAVSMTLLS Trigger: CGAGAGCAGTGTCATGGAAACAGCTTGGTGGTGCCAGGTCTTTGGCCTCACCACGGCATCTACAGAAGTACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR GCA 72 bp | CTAGGAGGAACAAAGATCCATCTGGGTAAGGCTGTGTaGACCTGTGATCCTAGTACTTGGGAGGAGGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: LGGTKIHLGKAV*TCDPSTWEEAS Trigger: ACTGGCCTCCTCCCAAGTACTAGGATCACAGGTGCACACAGCCTTACCCAGATGGATCTTTGTTCCTCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR GCA 72 bp | AGTCCTCAACAGAACATGAACAGTTGGCACATAAACTaGAGGAACCCTGGGCCTGCTCTGGAGGAGAATCCT | + |
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Preference number: 3 (lower is better) Translates to: SPQQNMNSWHIN*RNPGPALEENP Trigger: AGGATTCTCCTCCAGAGCAGGCCCAGGGTTCCTGCAGTTTATGTGCCAACTGTTCATGTTCTGTTGAGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR CCA 72 bp | ATTCTAGGTGGTTGTGAACCACTTAGTCTGACGCTCTaGCATACTGGAAGAGCAGGAAGTGCTCTTAACAGC | + |
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Preference number: 3 (lower is better) Translates to: ILGGCEPLSLTL*HTGRAGSALNS Trigger: GCTGTTAAGAGCACTTCCTGCTCTTCCAGTATGCCAGAGCGTCAGACTAAGTGGTTCACAACCACCTAGAAT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR-3UTR CAA 90 bp | TCAGTTCCAGTCTCTGCTCTCAAGCCACCTTCTTCCATACATAGGCCTGTCTCTACAGAACATGAACAGTaGGCACATAAACTGCAGGAA | + |
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Preference number: 3 (lower is better) Translates to: SVPVSALKPPSSIHRPVSTEHEQ*AHKLQE Trigger: TTCCTGCAGTTTATGTGCCAACTGTTCATGTTCTGT...AGAGACAGGCCTATGTATGGAAGAAGGTGGCTTGAGAGCAGAGACTGGAACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR-3UTR CAA 90 bp | CCTGTCTCTGAAAAATTTCCCTGTGTCACAGGAATAGTGGAGAAGAGGGGGATGGTCCAGTTCTCTTACTaGTTTGATATACAAGGGACA | + |
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Preference number: 3 (lower is better) Translates to: PVSEKFPCVTGIVEKRGMVQFSY*FDIQGT Trigger: TGTCCCTTGTATATCAAACAAGTAAGAGAACTGGAC...CATCCCCCTCTTCTCCACTATTCCTGTGACACAGGGAAATTTTTCAGAGACAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR-3UTR CAA 90 bp | TCTTCCATACATAGGCCTGTCTCTGAAAAATTTCCCTGTGTCACAGGAATAGTGGGAGATTCTTGCCCTTaGACTTTCAGATTTGATTCA | + |
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Preference number: 3 (lower is better) Translates to: SSIHRPVSEKFPCVTGIVGDSCP*TFRFDS Trigger: TGAATCAAATCTGAAAGTCAAAGGGCAAGAATCTCC...CACTATTCCTGTGACACAGGGAAATTTTTCAGAGACAGGCCTATGTATGGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR-3UTR CAA 90 bp | TCTTCCATACATAGGCCTGTCTCTGAAAAATTTCCCTGTGTCACAGGAATAGTGGTTCCCAGCTCTTTTTaGAGGTTACAATTATTGTCC | + |
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Preference number: 3 (lower is better) Translates to: SSIHRPVSEKFPCVTGIVVPSSF*RLQLLS Trigger: GGACAATAATTGTAACCTCAAAAAAGAGCTGGGAAC...CACTATTCCTGTGACACAGGGAAATTTTTCAGAGACAGGCCTATGTATGGAAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR TCA 72 bp | ATATACAAGGGACACCAGCTAGCACATATAAAAACATaGGGAGATTCTTGCCCTTTGACTTTCAGATTTGAT | + |
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Preference number: 3 (lower is better) Translates to: IYKGHQLAHIKT*GDSCPLTFRFD Trigger: ATCAAATCTGAAAGTCAAAGGGCAAGAATCTCCTCATGTTTTTATATGTGCTAGCTGGTGTCCCTTGTATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CCA 90 bp | AGGCCAAAGACCTGGCACCACCAAGCTGTTTCCATGACACTGCTCTCGGTGGAGCCCAGGTCCTGCAGATaGGCCACCAGGTGGACGTAT | + |
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Preference number: 4 (lower is better) Translates to: RPKTWHHQAVSMTLLSVEPRSCR*ATRWTY Trigger: ATACGTCCACCTGGTGGCCCATCTGCAGGACCTGGG...CTCCACCGAGAGCAGTGTCATGGAAACAGCTTGGTGGTGCCAGGTCTTTGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CCA 90 bp | AGGCCAAAGACCTGGCACCACCAAGCTGTTTCCATGACACTGCTCTCGGTGGAGAGAGCATCAGAAGCCTaGCCACAGGCCCTGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: RPKTWHHQAVSMTLLSVERASEA*PQALGL Trigger: CAGTCCCAGGGCCTGTGGCCAGGCTTCTGATGCTCT...CTCCACCGAGAGCAGTGTCATGGAAACAGCTTGGTGGTGCCAGGTCTTTGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR TCA 90 bp | AGGCCAAAGACCTGGCACCACCAAGCTGTTTCCATGACACTGCTCTCGGTGGAGCGACTGGAAGAACGCTaGGAGCACCACCATCCATCC | + |
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Preference number: 4 (lower is better) Translates to: RPKTWHHQAVSMTLLSVERLEER*EHHHPS Trigger: GGATGGATGGTGGTGCTCTCAGCGTTCTTCCAGTCG...CTCCACCGAGAGCAGTGTCATGGAAACAGCTTGGTGGTGCCAGGTCTTTGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR TCA 90 bp | CCTGTCTCTGAAAAATTTCCCTGTGTCACAGGAATAGTGGAGAAGAGGGGGATGGGCGGAGGAGAGAGGTaGTCTGGGCCCCAGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PVSEKFPCVTGIVEKRGMGGGER*SGPQGH Trigger: GTGGCCCTGGGGCCCAGATCACCTCTCTCCTCCGCC...CATCCCCCTCTTCTCCACTATTCCTGTGACACAGGGAAATTTTTCAGAGACAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR GCA 90 bp | TTCTGTAGATGCCGTGGTGAGGCCAAAGACCTGGCACCACCAAGCTGTTTCCATCCAGGAGACTCTGGCTaGCTGCTCCTCAAACGCCGC | + |
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Preference number: 4 (lower is better) Translates to: FCRCRGEAKDLAPPSCFHPGDSG*LLLKRR Trigger: GCGGCGTTTGAGGAGCAGGCAGCCAGAGTCTCCTGG...ATGGAAACAGCTTGGTGGTGCCAGGTCTTTGGCCTCACCACGGCATCTACAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR GCA 90 bp | AGCCTAGGAGGAACAAAGATCCATCTGGGTAAGGCTGTGTGCACCTGTGATCCTTCCCAGCCAACCAGATaGCACGCGCCCCACGAGGTC | + |
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Preference number: 4 (lower is better) Translates to: SLGGTKIHLGKAVCTCDPSQPTR*HAPHEV Trigger: GACCTCGTGGGGCGCGTGGCATCTGGTTGGCTGGGA...AGGATCACAGGTGCACACAGCCTTACCCAGATGGATCTTTGTTCCTCCTAGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CCA 90 bp | AGGCCAAAGACCTGGCACCACCAAGCTGTTTCCATGACACTGCTCTCGGTGGAGAACACGAGCGCCGACTaGAAGAACGCTGAGAGCACC | + |
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Preference number: 4 (lower is better) Translates to: RPKTWHHQAVSMTLLSVENTSAD*KNAEST Trigger: GGTGCTCTCAGCGTTCTTCCAGTCGGCGCTCGTGTT...CTCCACCGAGAGCAGTGTCATGGAAACAGCTTGGTGGTGCCAGGTCTTTGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CCA 90 bp | GATGCCGTGGTGAGGCCAAAGACCTGGCACCACCAAGCTGTTTCCATGACACTGTTCAGTCAGGGAGAGTaGGCGGAGGAGAGCACCACA | + |
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Preference number: 4 (lower is better) Translates to: DAVVRPKTWHHQAVSMTLFSQGE*AEESTT Trigger: TGTGGTGCTCTCCTCCGCCCACTCTCCCTGACTGAA...CAGTGTCATGGAAACAGCTTGGTGGTGCCAGGTCTTTGGCCTCACCACGGCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR TCA 90 bp | TGTGAACCACTTAGTCTGACGCTCTGGCATACTGGAAGAGCAGGAAGTGCTCTTAGGCCATGGTCGGAGTaGAGGTCAGGGCCCAGCCAG | + |
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Preference number: 4 (lower is better) Translates to: CEPLSLTLWHTGRAGSALRPWSE*RSGPSQ Trigger: CTGGCTGGGCCCTGACCTTCACTCCGACCATGGCCT...AAGAGCACTTCCTGCTCTTCCAGTATGCCAGAGCGTCAGACTAAGTGGTTCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR TCA 90 bp | CTAAGGCACTGTACTTCTGTAGATGCCGTGGTGAGGCCAAAGACCTGGCACCACTGGGGTCAGGGCTCCTaGTGTGAAACCATAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: LRHCTSVDAVVRPKTWHHWGQGS*CETIGH Trigger: GTGGCCTATGGTTTCACATCAGGAGCCCTGACCCCA...GTGGTGCCAGGTCTTTGGCCTCACCACGGCATCTACAGAAGTACAGTGCCTTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR TCA 90 bp | GATGCCGTGGTGAGGCCAAAGACCTGGCACCACCAAGCTGTTTCCATGACACTGAGAAATGGGGCAGGGTaGGAAGAACTCCACTTCCTG | + |
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Preference number: 4 (lower is better) Translates to: DAVVRPKTWHHQAVSMTLRNGAG*EELHFL Trigger: CAGGAAGTGGAGTTCTTCTCACCCTGCCCCATTTCT...CAGTGTCATGGAAACAGCTTGGTGGTGCCAGGTCTTTGGCCTCACCACGGCATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CCA 90 bp | TTCTGTAGATGCCGTGGTGAGGCCAAAGACCTGGCACCACCAAGCTGTTTCCATGCACCGCGATCCCTATaGAAGCGATCCAGGAGACTC | + |
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Preference number: 4 (lower is better) Translates to: FCRCRGEAKDLAPPSCFHAPRSL*KRSRRL Trigger: GAGTCTCCTGGATCGCTTCCATAGGGATCGCGGTGC...ATGGAAACAGCTTGGTGGTGCCAGGTCTTTGGCCTCACCACGGCATCTACAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CCA 90 bp | TCTGGCATACTGGAAGAGCAGGAAGTGCTCTTAACAGCTGAGCTCTTCTTTCTAGAAGGCCGCAGGCAGTaGGTCCCAGCCCAGGTCCTG | + |
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Preference number: 4 (lower is better) Translates to: SGILEEQEVLLTAELFFLEGRRQ*VPAQVL Trigger: CAGGACCTGGGCTGGGACCCACTGCCTGCGGCCTTC...TAGAAAGAAGAGCTCAGCTGTTAAGAGCACTTCCTGCTCTTCCAGTATGCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CCA 90 bp | GCTTTATCAGTTCCAGTCTCTGCTCTCAAGCCACCTTCTTCCATACATAGGCCTCCTGGCCACAGGCCCTaGGACTGCATCTCCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: ALSVPVSALKPPSSIHRPPGHRP*DCISQP Trigger: TGGCTGGGAGATGCAGTCCCAGGGCCTGTGGCCAGG...AGGCCTATGTATGGAAGAAGGTGGCTTGAGAGCAGAGACTGGAACTGATAAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR TCA 90 bp | CCTGTCTCTGAAAAATTTCCCTGTGTCACAGGAATAGTGGAGAAGAGGGGGATGGGCCCAGCCAGAGCCTaGCAGCAGCCCAATACTCAG | + |
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Preference number: 4 (lower is better) Translates to: PVSEKFPCVTGIVEKRGMGPARA*QQPNTQ Trigger: CTGAGTATTGGGCTGCTGTCAGGCTCTGGCTGGGCC...CATCCCCCTCTTCTCCACTATTCCTGTGACACAGGGAAATTTTTCAGAGACAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR GCA 90 bp | CAGGAAGTGCTCTTAACAGCTGAGCTCTTCTTTCTAGCTCCCAACCCTTACTTTTCCCAGCCCAGGTCCTaGAGATGGGCCACCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: QEVLLTAELFFLAPNPYFSQPRS*RWATRW Trigger: CCACCTGGTGGCCCATCTGCAGGACCTGGGCTGGGA...AAAGTAAGGGTTGGGAGCTAGAAAGAAGAGCTCAGCTGTTAAGAGCACTTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CCA 90 bp | TGTGAACCACTTAGTCTGACGCTCTGGCATACTGGAAGAGCAGGAAGTGCTCTTCGGAGGAAGGGACCATaGCGGAGGAGAGAGGTGATC | + |
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Preference number: 4 (lower is better) Translates to: CEPLSLTLWHTGRAGSALRRKGP*RRREVI Trigger: GATCACCTCTCTCCTCCGCCATGGTCCCTTCCTCCG...AAGAGCACTTCCTGCTCTTCCAGTATGCCAGAGCGTCAGACTAAGTGGTTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR GCA 90 bp | TCAGTTCCAGTCTCTGCTCTCAAGCCACCTTCTTCCATACATAGGCCTGTCTCTGGGCTCCCAAACTGCTaGACCGCGATCCCTATGGAA | + |
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Preference number: 4 (lower is better) Translates to: SVPVSALKPPSSIHRPVSGLPNC*TAIPME Trigger: TTCCATAGGGATCGCGGTGCAGCAGTTTGGGAGCCC...AGAGACAGGCCTATGTATGGAAGAAGGTGGCTTGAGAGCAGAGACTGGAACTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CCA 90 bp | CAGGAAGTGCTCTTAACAGCTGAGCTCTTCTTTCTAGCTCCCAACCCTTACTTTTCAGGGCCAGCCCCATaGCCAGAGATCGACGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: QEVLLTAELFFLAPNPYFSGPAP*PEIDAE Trigger: CTCAGCGTCGATCTCTGGCCATGGGGCTGGCCCTGA...AAAGTAAGGGTTGGGAGCTAGAAAGAAGAGCTCAGCTGTTAAGAGCACTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR TCA 90 bp | TGGAGGAGAATCCTAGCAAGAATCCTAAGGCACTGTACTTCTGTAGATGCCGTGCAGGACTACCAGGGTTaGGGAAGCCTGAGCAACAGG | + |
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Preference number: 4 (lower is better) Translates to: WRRILARILRHCTSVDAVQDYQG*GSLSNR Trigger: CCTGTTGCTCAGGCTTCCTCAACCCTGGTAGTCCTG...CACGGCATCTACAGAAGTACAGTGCCTTAGGATTCTTGCTAGGATTCTCCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR GCA 90 bp | TGTGAACCACTTAGTCTGACGCTCTGGCATACTGGAAGAGCAGGAAGTGCTCTTATTGGGCTCCCAAACTaGTGCACCGCGATCCCTATG | + |
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Preference number: 4 (lower is better) Translates to: CEPLSLTLWHTGRAGSALIGLPN*CTAIPM Trigger: CATAGGGATCGCGGTGCAGCAGTTTGGGAGCCCAAT...AAGAGCACTTCCTGCTCTTCCAGTATGCCAGAGCGTCAGACTAAGTGGTTCACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR GCA 90 bp | CAGGAAGTGCTCTTAACAGCTGAGCTCTTCTTTCTAGCTCCCAACCCTTACTTTTGGGCCCCAGCTTCGTaGTCAGGGCACTGCCTATTG | + |
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Preference number: 4 (lower is better) Translates to: QEVLLTAELFFLAPNPYFWAPAS*SGHCLL Trigger: CAATAGGCAGTGCCCTGAGCACGAAGCTGGGGCCCA...AAAGTAAGGGTTGGGAGCTAGAAAGAAGAGCTCAGCTGTTAAGAGCACTTCCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR GCA 90 bp | CTGCTCTCAAGCCACCTTCTTCCATACATAGGCCTGTCTCTGAAAAATTTCCCTCCAGCGCAGCCAAGATaGCCCCAGTCATCACCACAG | + |
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Preference number: 4 (lower is better) Translates to: LLSSHLLPYIGLSLKNFPPAQPR*PQSSPQ Trigger: CTGTGGTGATGACTGGGGGCATCTTGGCTGCGCTGG...AGGGAAATTTTTCAGAGACAGGCCTATGTATGGAAGAAGGTGGCTTGAGAGCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR GCA 90 bp | AGCCTAGGAGGAACAAAGATCCATCTGGGTAAGGCTGTGTGCACCTGTGATCCTATGCAAAAGAGGAGATaGCCACTCCAGTCAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLGGTKIHLGKAVCTCDPMQKRR*PLQSGP Trigger: TGGCCCTGACTGGAGTGGGCATCTCCTCTTTTGCAT...AGGATCACAGGTGCACACAGCCTTACCCAGATGGATCTTTGTTCCTCCTAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CCA 90 bp | GCTTTATCAGTTCCAGTCTCTGCTCTCAAGCCACCTTCTTCCATACATAGGCCTCGATCCAGGAGACTCTaGCTGCCTGCTCCTCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: ALSVPVSALKPPSSIHRPRSRRL*LPAPQT Trigger: CGTTTGAGGAGCAGGCAGCCAGAGTCTCCTGGATCG...AGGCCTATGTATGGAAGAAGGTGGCTTGAGAGCAGAGACTGGAACTGATAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR TCA 90 bp | GCTTTATCAGTTCCAGTCTCTGCTCTCAAGCCACCTTCTTCCATACATAGGCCTAGGGTTGAGGAAGCCTaGGCAACAGGAAACAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALSVPVSALKPPSSIHRPRVEEA*ATGNRA Trigger: AGCCCTGTTTCCTGTTGCTCAGGCTTCCTCAACCCT...AGGCCTATGTATGGAAGAAGGTGGCTTGAGAGCAGAGACTGGAACTGATAAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR TCA 90 bp | CCTGTCTCTGAAAAATTTCCCTGTGTCACAGGAATAGTGGAGAAGAGGGGGATGTCAGGGCTCCTGATGTaGAACCATAGGCCACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVSEKFPCVTGIVEKRGMSGLLM*NHRPQP Trigger: TGGCTGTGGCCTATGGTTTCACATCAGGAGCCCTGA...CATCCCCCTCTTCTCCACTATTCCTGTGACACAGGGAAATTTTTCAGAGACAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CCA 90 bp | CTGCTCTCAAGCCACCTTCTTCCATACATAGGCCTGTCTCTGAAAAATTTCCCTACACCCCAGTCAGGGTaGTCCAGAGCATCAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLSSHLLPYIGLSLKNFPTPQSG*SRASEA Trigger: GGCTTCTGATGCTCTGGACCACCCTGACTGGGGTGT...AGGGAAATTTTTCAGAGACAGGCCTATGTATGGAAGAAGGTGGCTTGAGAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CCA 90 bp | CTAAGGCACTGTACTTCTGTAGATGCCGTGGTGAGGCCAAAGACCTGGCACCACTGGGCAGGGGAATTTTaGTATCTGATGCCTCTATCA | + |
|
Preference number: 4 (lower is better) Translates to: LRHCTSVDAVVRPKTWHHWAGEF*YLMPLS Trigger: TGATAGAGGCATCAGATACCAAAATTCCCCTGCCCA...GTGGTGCCAGGTCTTTGGCCTCACCACGGCATCTACAGAAGTACAGTGCCTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR TCA 90 bp | TGGAGGAGAATCCTAGCAAGAATCCTAAGGCACTGTACTTCTGTAGATGCCGTGCAAGGAGGTAGCAAATaGAGCAAGCAGCATCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WRRILARILRHCTSVDAVQGGSK*SKQHPQ Trigger: CTGGGGATGCTGCTTGCTTCATTTGCTACCTCCTTG...CACGGCATCTACAGAAGTACAGTGCCTTAGGATTCTTGCTAGGATTCTCCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR TCA 90 bp | TGGAGGAGAATCCTAGCAAGAATCCTAAGGCACTGTACTTCTGTAGATGCCGTGTCCAGGCATAGTTGTTaGTCAGCCACTGGAAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WRRILARILRHCTSVDAVSRHSC*SATGRG Trigger: CCCTCTTCCAGTGGCTGATCAACAACTATGCCTGGA...CACGGCATCTACAGAAGTACAGTGCCTTAGGATTCTTGCTAGGATTCTCCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR TCA 90 bp | TTCTGTAGATGCCGTGGTGAGGCCAAAGACCTGGCACCACCAAGCTGTTTCCATGGGAATTTTGGTATCTaGTGCCTCTATCACAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FCRCRGEAKDLAPPSCFHGNFGI*CLYHKV Trigger: GACCTTGTGATAGAGGCATCAGATACCAAAATTCCC...ATGGAAACAGCTTGGTGGTGCCAGGTCTTTGGCCTCACCACGGCATCTACAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR GCA 90 bp | TCTTCCATACATAGGCCTGTCTCTGAAAAATTTCCCTGTGTCACAGGAATAGTGGAGACTCTGGCTGCCTaGTCCTCAAACGCCGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSIHRPVSEKFPCVTGIVETLAA*SSNAAT Trigger: TGTGGCGGCGTTTGAGGAGCAGGCAGCCAGAGTCTC...CACTATTCCTGTGACACAGGGAAATTTTTCAGAGACAGGCCTATGTATGGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR GCA 90 bp | TGGAGGAGAATCCTAGCAAGAATCCTAAGGCACTGTACTTCTGTAGATGCCGTGAAGAAGCCGTGTAGTTaGCTGTCACATCCCGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: WRRILARILRHCTSVDAVKKPCS*LSHPGG Trigger: ACCTCCGGGATGTGACAGGCAACTACACGGCTTCTT...CACGGCATCTACAGAAGTACAGTGCCTTAGGATTCTTGCTAGGATTCTCCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CCA 90 bp | CTGCTCTCAAGCCACCTTCTTCCATACATAGGCCTGTCTCTGAAAAATTTCCCTAGATGGGCCACCAGGTaGACGTATGGAATGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLSSHLLPYIGLSLKNFPRWATR*TYGMKK Trigger: CTTCTTCATTCCATACGTCCACCTGGTGGCCCATCT...AGGGAAATTTTTCAGAGACAGGCCTATGTATGGAAGAAGGTGGCTTGAGAGCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CCA 90 bp | GCTTTATCAGTTCCAGTCTCTGCTCTCAAGCCACCTTCTTCCATACATAGGCCTTCTATCACAAGGTCCTaGGGTCTGGAGGTAGAAACT | + |
|
Preference number: 4 (lower is better) Translates to: ALSVPVSALKPPSSIHRPSITRS*GLEVET Trigger: AGTTTCTACCTCCAGACCCCAGGACCTTGTGATAGA...AGGCCTATGTATGGAAGAAGGTGGCTTGAGAGCAGAGACTGGAACTGATAAAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR TCA 90 bp | GCTTTATCAGTTCCAGTCTCTGCTCTCAAGCCACCTTCTTCCATACATAGGCCTTCTGGAGGTAGAAACTaGGATGCAGGAGAAGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: ALSVPVSALKPPSSIHRPSGGRN*DAGEEM Trigger: CATTTCTTCTCCTGCATCTCAGTTTCTACCTCCAGA...AGGCCTATGTATGGAAGAAGGTGGCTTGAGAGCAGAGACTGGAACTGATAAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CCA 90 bp | CTGCTCTCAAGCCACCTTCTTCCATACATAGGCCTGTCTCTGAAAAATTTCCCTCACCAGGTGGACGTATaGAATGAAGAAGCCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSSHLLPYIGLSLKNFPHQVDV*NEEASV Trigger: AACACTGGCTTCTTCATTCCATACGTCCACCTGGTG...AGGGAAATTTTTCAGAGACAGGCCTATGTATGGAAGAAGGTGGCTTGAGAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CCA 90 bp | GCTTTATCAGTTCCAGTCTCTGCTCTCAAGCCACCTTCTTCCATACATAGGCCTATACTCAGGTATAGGTaGGTCAAGGAGGTAGCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ALSVPVSALKPPSSIHRPILRYR*VKEVAN Trigger: ATTTGCTACCTCCTTGACCCACCTATACCTGAGTAT...AGGCCTATGTATGGAAGAAGGTGGCTTGAGAGCAGAGACTGGAACTGATAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| 3UTR CAA 72 bp | ATTAGCTGCCCCAAGCACCTGGTTCCCAGCTCTTTTTaGAGGTTACAATTATTGTCCAGTTCTCTTACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISCPKHLVPSSF*RLQLLSSSLTC Trigger: ACAAGTAAGAGAACTGGACAATAATTGTAACCTCAAAAAAGAGCTGGGAACCAGGTGCTTGGGGCAGCTAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS CCA 90 bp | CCCAGTCAGGGTGGTCCAGAGCATCAGAAGCCTGGCCACAGGCCCTaGGACTGCATCTCCCAGCCAACCAGATGCCACGCGCCCCACGAG | + |
|
Preference number: 5 (lower is better) Translates to: PSQGGPEHQKPGHRP*DCISQPTRCHAPHE Trigger: CTCGTGGGGCGCGTGGCATCTGGTTGGCTGGGAGATGCAGTCCCAGGGCCTGTGGCCAGGCTTCTGATGCTCTGGACCACCCTGACTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS CCA 90 bp | GCAGTGTATCGGAGGAAGGGACCATGGCGGAGGAGAGAGGTGATCTaGGCCCCAGGGCCACCCACAGCAGCGTCTTCAGTCAGGGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: AVYRRKGPWRRREVI*APGPPTAASSVRES Trigger: ACTCTCCCTGACTGAAGACGCTGCTGTGGGTGGCCCTGGGGCCCAGATCACCTCTCTCCTCCGCCATGGTCCCTTCCTCCGATACACTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS CCA 90 bp | TCAGGGCCCAGCCAGAGCTCCCAAACTGCTGCACCGCGATCCCTATaGAAGCGATCCAGGAGACTCTGGCTGCCTGCTCCTCAAACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SGPSQSSQTAAPRSL*KRSRRLWLPAPQTP Trigger: CGGCGTTTGAGGAGCAGGCAGCCAGAGTCTCCTGGATCGCTTCCATAGGGATCGCGGTGCAGCAGTTTGGGAGCTCTGGCTGGGCCCTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141290.2 |
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| CDS CCA 90 bp | GGGCACTGCCTATTGGGCTCCCAAACTGCTGCACCGCGATCCCTATaGAAGCGATCCAGGAGACTCTGGCTGCCTGCTCCTCAAACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: GHCLLGSQTAAPRSL*KRSRRLWLPAPQTP Trigger: CGGCGTTTGAGGAGCAGGCAGCCAGAGTCTCCTGGATCGCTTCCATAGGGATCGCGGTGCAGCAGTTTGGGAGCCCAATAGGCAGTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS GCA 90 bp | ACTGAAAGTAGGAAGGCCGCAGGCAGTGGGTCCCAGCCCAGGTCCTaGAGATGGGCCACCAGGTGGACGTATGGAATGAAGAAGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TESRKAAGSGSQPRS*RWATRWTYGMKKPV Trigger: CACTGGCTTCTTCATTCCATACGTCCACCTGGTGGCCCATCTGCAGGACCTGGGCTGGGACCCACTGCCTGCGGCCTTCCTACTTTCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS TCA 90 bp | GTTCAGGAAGCACGGAGAAGGCCACTGGGGTCAGGGCTCCTGATGTaGAACCATAGGCCACAGCCAGGACTACCAGGGTTGAGGAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VQEARRRPLGSGLLM*NHRPQPGLPGLRKP Trigger: AGGCTTCCTCAACCCTGGTAGTCCTGGCTGTGGCCTATGGTTTCACATCAGGAGCCCTGACCCCAGTGGCCTTCTCCGTGCTTCCTGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS GCA 90 bp | CTGCTGCACCGCGATCCCTATGGAAGCGATCCAGGAGACTCTGGCTaGCTGCTCCTCAAACGCCGCCACAAATTCCACGAAGAAGACACC | + |
|
Preference number: 5 (lower is better) Translates to: LLHRDPYGSDPGDSG*LLLKRRHKFHEEDT Trigger: GGTGTCTTCTTCGTGGAATTTGTGGCGGCGTTTGAGGAGCAGGCAGCCAGAGTCTCCTGGATCGCTTCCATAGGGATCGCGGTGCAGCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060010.3 ENSMUST00000141290.2 ENSMUST00000159867.2 |
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| CDS GCA 90 bp | TGCACCGCGATCCCTATGGAAGCGATCCAGGAGACTCTGGCTGCCTaGTCCTCAAACGCCGCCACAAATTCCACGAAGAAGACACCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: CTAIPMEAIQETLAA*SSNAATNSTKKTPK Trigger: CTTCGGTGTCTTCTTCGTGGAATTTGTGGCGGCGTTTGAGGAGCAGGCAGCCAGAGTCTCCTGGATCGCTTCCATAGGGATCGCGGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060010.3 ENSMUST00000141290.2 ENSMUST00000159867.2 |
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| CDS CCA 90 bp | CAAATGCAAAAGAGGAGATGCCCACTCCAGTCAGGGCCAGCCCCATaGCCAGAGATCGACGCTGAGAGAAGTAACGGGAAAGGCAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: QMQKRRCPLQSGPAP*PEIDAERSNGKGRP Trigger: TGGCCTGCCTTTCCCGTTACTTCTCTCAGCGTCGATCTCTGGCCATGGGGCTGGCCCTGACTGGAGTGGGCATCTCCTCTTTTGCATTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000060010.3 ENSMUST00000190533.2 |
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| CDS CCA 90 bp | CAAACTGCTGCACCGCGATCCCTATGGAAGCGATCCAGGAGACTCTaGCTGCCTGCTCCTCAAACGCCGCCACAAATTCCACGAAGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QTAAPRSLWKRSRRL*LPAPQTPPQIPRRR Trigger: TCTTCTTCGTGGAATTTGTGGCGGCGTTTGAGGAGCAGGCAGCCAGAGTCTCCTGGATCGCTTCCATAGGGATCGCGGTGCAGCAGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060010.3 ENSMUST00000141290.2 ENSMUST00000159867.2 |
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| CDS-3UTR CAA 90 bp | TTCTGTAGATGCCGTGGTGAGGCCAAAGACCTGGCACCACCAAGCTGTTTCCATTCAGGGCACTGCCTATaGGGCTCCCAAACTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FCRCRGEAKDLAPPSCFHSGHCL*GSQTAA Trigger: TGCAGCAGTTTGGGAGCCCAATAGGCAGTGCCCTGA...ATGGAAACAGCTTGGTGGTGCCAGGTCTTTGGCCTCACCACGGCATCTACAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CAA 90 bp | CCTGTCTCTGAAAAATTTCCCTGTGTCACAGGAATAGTGGAGAAGAGGGGGATGCCAGGACTACCAGGGTaGAGGAAGCCTGAGCAACAG | + |
|
Preference number: 5 (lower is better) Translates to: PVSEKFPCVTGIVEKRGMPGLPG*RKPEQQ Trigger: CTGTTGCTCAGGCTTCCTCAACCCTGGTAGTCCTGG...CATCCCCCTCTTCTCCACTATTCCTGTGACACAGGGAAATTTTTCAGAGACAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS-3UTR CAA 90 bp | TGTGAACCACTTAGTCTGACGCTCTGGCATACTGGAAGAGCAGGAAGTGCTCTTTTGGGCAGGGGAATTTaGGTATCTGATGCCTCTATC | + |
|
Preference number: 5 (lower is better) Translates to: CEPLSLTLWHTGRAGSALLGRGI*VSDASI Trigger: GATAGAGGCATCAGATACCAAAATTCCCCTGCCCAA...AAGAGCACTTCCTGCTCTTCCAGTATGCCAGAGCGTCAGACTAAGTGGTTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS CCA 72 bp | AGGGTGAGGGCAGCAGTGTATCGGAGGAAGGGACCATaGCGGAGGAGAGAGGTGATCTGGGCCCCAGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: RVRAAVYRRKGP*RRREVIWAPGP Trigger: TGGCCCTGGGGCCCAGATCACCTCTCTCCTCCGCCATGGTCCCTTCCTCCGATACACTGCTGCCCTCACCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS CCA 72 bp | GGTGGTCCAGAGCATCAGAAGCCTGGCCACAGGCCCTaGGACTGCATCTCCCAGCCAACCAGATGCCACGCG | + |
|
Preference number: 6 (lower is better) Translates to: GGPEHQKPGHRP*DCISQPTRCHA Trigger: CGCGTGGCATCTGGTTGGCTGGGAGATGCAGTCCCAGGGCCTGTGGCCAGGCTTCTGATGCTCTGGACCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS GCA 72 bp | AGGAAGGCCGCAGGCAGTGGGTCCCAGCCCAGGTCCTaGAGATGGGCCACCAGGTGGACGTATGGAATGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RKAAGSGSQPRS*RWATRWTYGMK Trigger: CTTCATTCCATACGTCCACCTGGTGGCCCATCTGCAGGACCTGGGCTGGGACCCACTGCCTGCGGCCTTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS GCA 72 bp | GTGAAGGTCAGGGCCCAGCCAGAGCTCCCAAACTGCTaGACCGCGATCCCTATGGAAGCGATCCAGGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: VKVRAQPELPNC*TAIPMEAIQET Trigger: AGTCTCCTGGATCGCTTCCATAGGGATCGCGGTGCAGCAGTTTGGGAGCTCTGGCTGGGCCCTGACCTTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141290.2 |
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| CDS CCA 72 bp | CCGAAGGAACGGAGTACCCCAAACACGAGCGCCGACTaGAAGAACGCTGAGAGCACCACCATCCATCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PKERSTPNTSAD*KNAESTTIHPQ Trigger: CTGGGGATGGATGGTGGTGCTCTCAGCGTTCTTCCAGTCGGCGCTCGTGTTTGGGGTACTCCGTTCCTTCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000060010.3 ENSMUST00000141290.2 ENSMUST00000159867.2 |
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| CDS TCA 72 bp | AGGAAGCACGGAGAAGGCCACTGGGGTCAGGGCTCCTaGTGTGAAACCATAGGCCACAGCCAGGACTACCAG | + |
|
Preference number: 6 (lower is better) Translates to: RKHGEGHWGQGS*CETIGHSQDYQ Trigger: CTGGTAGTCCTGGCTGTGGCCTATGGTTTCACATCAGGAGCCCTGACCCCAGTGGCCTTCTCCGTGCTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS GCA 72 bp | GTGCTCAGGGCACTGCCTATTGGGCTCCCAAACTGCTaGACCGCGATCCCTATGGAAGCGATCCAGGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: VLRALPIGLPNC*TAIPMEAIQET Trigger: AGTCTCCTGGATCGCTTCCATAGGGATCGCGGTGCAGCAGTTTGGGAGCCCAATAGGCAGTGCCCTGAGCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS GCA 72 bp | GGAAGGCCCCGGCCACCACAAAAGAAGCCGTGTAGTTaGCTGTCACATCCCGGAGGTAGCCTGATAGAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GRPRPPQKKPCS*LSHPGGSLIEE Trigger: CTCCTCTATCAGGCTACCTCCGGGATGTGACAGGCAACTACACGGCTTCTTTTGTGGTGGCCGGGGCCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS GCA 72 bp | CAGCCAGGACTACCAGGGTTGAGGAAGCTCCCAAACTaGTGCACCGCGATCCCTATGGAAGCGATCCAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: QPGLPGLRKLPN*CTAIPMEAIQE Trigger: CTCCTGGATCGCTTCCATAGGGATCGCGGTGCAGCAGTTTGGGAGCTTCCTCAACCCTGGTAGTCCTGGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159867.2 |
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| CDS CCA 72 bp | GCCCAGGTCCTGCAGATGGGCCACCAGGTGGACGTATaGAATGAAGAAGCCAGTGTTGATCAGGGTGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AQVLQMGHQVDV*NEEASVDQGEG Trigger: GCCCTCACCCTGATCAACACTGGCTTCTTCATTCCATACGTCCACCTGGTGGCCCATCTGCAGGACCTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS GCA 72 bp | CGCGATCCCTATGGAAGCGATCCAGGAGACTCTGGCTaGCTGCTCCTCAAACGCCGCCACAAATTCCACGAA | + |
|
Preference number: 6 (lower is better) Translates to: RDPYGSDPGDSG*LLLKRRHKFHE Trigger: TTCGTGGAATTTGTGGCGGCGTTTGAGGAGCAGGCAGCCAGAGTCTCCTGGATCGCTTCCATAGGGATCGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060010.3 ENSMUST00000141290.2 ENSMUST00000159867.2 |
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| CDS GCA 72 bp | CCAGGACTACCAGGGTTGAGGAAGCTCCCAAACTGCTaGACCGCGATCCCTATGGAAGCGATCCAGGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: PGLPGLRKLPNC*TAIPMEAIQET Trigger: AGTCTCCTGGATCGCTTCCATAGGGATCGCGGTGCAGCAGTTTGGGAGCTTCCTCAACCCTGGTAGTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159867.2 |
||
| CDS CCA 72 bp | AAGAGGAGATGCCCACTCCAGTCAGGGCCAGCCCCATaGCCAGAGATCGACGCTGAGAGAAGTAACGGGAAA | + |
|
Preference number: 6 (lower is better) Translates to: KRRCPLQSGPAP*PEIDAERSNGK Trigger: TTTCCCGTTACTTCTCTCAGCGTCGATCTCTGGCCATGGGGCTGGCCCTGACTGGAGTGGGCATCTCCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000060010.3 ENSMUST00000190533.2 |
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| CDS CAA 90 bp | TGCAGATGGGCCACCAGGTGGACGTATGGAATGAAGAAGCCAGTGTaGATCAGGGTGAGGGCAGCAGTGTATCGGAGGAAGGGACCATGG | + |
|
Preference number: 6 (lower is better) Translates to: CRWATRWTYGMKKPV*IRVRAAVYRRKGPW Trigger: CCATGGTCCCTTCCTCCGATACACTGCTGCCCTCACCCTGATCAACACTGGCTTCTTCATTCCATACGTCCACCTGGTGGCCCATCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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| CDS GCA 72 bp | ATCCCTATGGAAGCGATCCAGGAGACTCTGGCTGCCTaGTCCTCAAACGCCGCCACAAATTCCACGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: IPMEAIQETLAA*SSNAATNSTKK Trigger: CTTCTTCGTGGAATTTGTGGCGGCGTTTGAGGAGCAGGCAGCCAGAGTCTCCTGGATCGCTTCCATAGGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000060010.3 ENSMUST00000141290.2 ENSMUST00000159867.2 |
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| CDS CCA 72 bp | GGAATTTTGGTATCTGATGCCTCTATCACAAGGTCCTaGGGTCTGGAGGTAGAAACTGAGATGCAGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GILVSDASITRS*GLEVETEMQEK Trigger: CTTCTCCTGCATCTCAGTTTCTACCTCCAGACCCCAGGACCTTGTGATAGAGGCATCAGATACCAAAATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000060010.3 |
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