Pregenerated sensors for SLC16A12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000009378Ensembl transcript IDs: ENSMUST00000009522.4
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCAGTTCAACGAGGATTCAGCCACTTCAGCCATTCCTCAAAACTTaGTCATTTCTCCCAGCACTGTGTCTGGCTAAAGCCACGCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: FSSTRIQPLQPFLKT*SFLPALCLAKATLG Trigger: TCCCAGCGTGGCTTTAGCCAGACACAGTGCTGGGAGAAATGACCAAGTTTTGAGGAATGGCTGAAGTGGCTGAATCCTCGTTGAACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR GCA 90 bp | AAGAGTCTCAAGAACTTCTTTGCCACTCTAAAAATTGAGGCACTCTaGCCTCAAGCCACCTCTGCATCTCCACTGCCAGCATACTCACTG | + |
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Preference number: 1 (lower is better) Translates to: KSLKNFFATLKIEAL*PQATSASPLPAYSL Trigger: CAGTGAGTATGCTGGCAGTGGAGATGCAGAGGTGGCTTGAGGGCAGAGTGCCTCAATTTTTAGAGTGGCAAAGAAGTTCTTGAGACTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR CCA 90 bp | AGCCACCCTCTAAAGTCCATTCCAGCCATGGTGTTTGATGATTCTTaGGTCTCTCAAAGTGATGCCCATTGGAAGAGGCAGGGAACTGAT | + |
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Preference number: 1 (lower is better) Translates to: SHPLKSIPAMVFDDS*VSQSDAHWKRQGTD Trigger: ATCAGTTCCCTGCCTCTTCCAATGGGCATCACTTTGAGAGACCCAAGAATCATCAAACACCATGGCTGGAATGGACTTTAGAGGGTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR CCA 90 bp | TCCTTTAATTATGTAACTTGTCCTTCTTTGCAGATGGAACATGACTaGGGATTCAGGAATCTTCATTGTGTGGATTTGAAAACAGCTGGA | + |
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Preference number: 1 (lower is better) Translates to: SFNYVTCPSLQMEHD*GFRNLHCVDLKTAG Trigger: TCCAGCTGTTTTCAAATCCACACAATGAAGATTCCTGAATCCCCAGTCATGTTCCATCTGCAAAGAAGGACAAGTTACATAATTAAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR-3UTR CCA 90 bp | CTAAAGCCACGCTGGGACCTCTTGGTGACAGTAGGTTACATGGCCTTTGAGATCAACAACCTGGTGGCCTaGGGTCCACCAGCCTTGAAG | + |
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Preference number: 2 (lower is better) Translates to: LKPRWDLLVTVGYMAFEINNLVA*GPPALK Trigger: CTTCAAGGCTGGTGGACCCCAGGCCACCAGGTTGTT...GATCTCAAAGGCCATGTAACCTACTGTCACCAAGAGGTCCCAGCGTGGCTTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR-3UTR CCA 90 bp | TTTCTCCCAGCACTGTGTCTGGCTAAAGCCACGCTGGGACCTCTTGGTGACAGTCAGCTGGAGATAAGATaGGGGACCCACTCTTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: FLPALCLAKATLGPLGDSQLEIR*GTHSSF Trigger: AAAAGAAGAGTGGGTCCCCCATCTTATCTCCAGCTG...ACTGTCACCAAGAGGTCCCAGCGTGGCTTTAGCCAGACACAGTGCTGGGAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR-3UTR TCA 90 bp | TTTCTCCCAGCACTGTGTCTGGCTAAAGCCACGCTGGGACCTCTTGGTGACAGTGCCTTGGAGTTGCCTTaGAATACAGCTAATCCCATA | + |
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Preference number: 2 (lower is better) Translates to: FLPALCLAKATLGPLGDSALELP*NTANPI Trigger: TATGGGATTAGCTGTATTTCAAGGCAACTCCAAGGC...ACTGTCACCAAGAGGTCCCAGCGTGGCTTTAGCCAGACACAGTGCTGGGAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR-3UTR GCA 90 bp | ATTCTTGGGTCTCTCAAAGTGATGCCCATTGGAAGAGGCAGGGAACTGATGAGACCCTCAAGCCACCTCTaGATCTCCACTGCCAGCATA | + |
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Preference number: 2 (lower is better) Translates to: ILGSLKVMPIGRGRELMRPSSHL*ISTASI Trigger: TATGCTGGCAGTGGAGATGCAGAGGTGGCTTGAGGG...TCTCATCAGTTCCCTGCCTCTTCCAATGGGCATCACTTTGAGAGACCCAAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR-3UTR CCA 90 bp | CTAAAGCCACGCTGGGACCTCTTGGTGACAGTAGGTTACATGGCCTTTGAGATCCAATGGCCTCTGCCTTaGAGTTGCCTTGAAATACAG | + |
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Preference number: 2 (lower is better) Translates to: LKPRWDLLVTVGYMAFEIQWPLP*SCLEIQ Trigger: CTGTATTTCAAGGCAACTCCAAGGCAGAGGCCATTG...GATCTCAAAGGCCATGTAACCTACTGTCACCAAGAGGTCCCAGCGTGGCTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR CAA 90 bp | CATTTCTCCCAGCACTGTGTCTGGCTAAAGCCACGCTGGGACCTCTaGGTGACAGTAGGTTACATGGCCTTTGAGATCAAAATGTTCCTT | + |
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Preference number: 2 (lower is better) Translates to: HFSQHCVWLKPRWDL*VTVGYMAFEIKMFL Trigger: AAGGAACATTTTGATCTCAAAGGCCATGTAACCTACTGTCACCAAGAGGTCCCAGCGTGGCTTTAGCCAGACACAGTGCTGGGAGAAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR-3UTR TCA 90 bp | TATGACAAAACCCATTCTCAATGGCCTCTGCCTTGGAGTTGCCTTGAAATACAGAATATTTCCAGACCATaGACAACCTGGTGGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: YDKTHSQWPLPWSCLEIQNISRP*TTWWPG Trigger: CCCAGGCCACCAGGTTGTTCATGGTCTGGAAATATT...CTGTATTTCAAGGCAACTCCAAGGCAGAGGCCATTGAGAATGGGTTTTGTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR-3UTR GCA 90 bp | CTAAAGCCACGCTGGGACCTCTTGGTGACAGTAGGTTACATGGCCTTTGAGATCTCCAGATTTCTTCGTTaGTCGTTATTTTCCCCCATA | + |
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Preference number: 2 (lower is better) Translates to: LKPRWDLLVTVGYMAFEISRFLR*SLFSPI Trigger: TATGGGGGAAAATAACGAGCAACGAAGAAATCTGGA...GATCTCAAAGGCCATGTAACCTACTGTCACCAAGAGGTCCCAGCGTGGCTTTAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR-3UTR CCA 90 bp | CTAAAGCCACGCTGGGACCTCTTGGTGACAGTAGGTTACATGGCCTTTGAGATCTCCCTTCAGAAAAGATaGAGCAGTTATTCCACCATT | + |
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Preference number: 2 (lower is better) Translates to: LKPRWDLLVTVGYMAFEISLQKR*SSYSTI Trigger: AATGGTGGAATAACTGCTCCATCTTTTCTGAAGGGA...GATCTCAAAGGCCATGTAACCTACTGTCACCAAGAGGTCCCAGCGTGGCTTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR-3UTR GCA 90 bp | GACTCCCACCAGATACCTGCTGACTCAAGAATTCAATTACTGCTCAATGGGAATCCTCTGCCTTGGAGTTaGCTTGAAATACAGCTAATC | + |
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Preference number: 2 (lower is better) Translates to: DSHQIPADSRIQLLLNGNPLPWS*LEIQLI Trigger: GATTAGCTGTATTTCAAGGCAACTCCAAGGCAGAGG...ATTCCCATTGAGCAGTAATTGAATTCTTGAGTCAGCAGGTATCTGGTGGGAGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR-3UTR GCA 90 bp | AAAATTCAGAAAGGATTCCAAGTACCAAGAAAGTCTGGCTTTCAAGAAGGAGCACCTCTGCATCTCCACTaGCAGCATACTCACTGCTTC | + |
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Preference number: 2 (lower is better) Translates to: KIQKGFQVPRKSGFQEGAPLHLH*QHTHCF Trigger: GAAGCAGTGAGTATGCTGGCAGTGGAGATGCAGAGG...TGCTCCTTCTTGAAAGCCAGACTTTCTTGGTACTTGGAATCCTTTCTGAATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR-3UTR TCA 90 bp | TATGACAAAACCCATTCTCAATGGCCTCTGCCTTGGAGTTGCCTTGAAATACAGAGTACAAATCCCAAATaGGAAAACTCCAGGCTACTC | + |
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Preference number: 2 (lower is better) Translates to: YDKTHSQWPLPWSCLEIQSTNPK*ENSRLL Trigger: GAGTAGCCTGGAGTTTTCTCATTTGGGATTTGTACT...CTGTATTTCAAGGCAACTCCAAGGCAGAGGCCATTGAGAATGGGTTTTGTCATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR-3UTR TCA 90 bp | ATTCTTGGGTCTCTCAAAGTGATGCCCATTGGAAGAGGCAGGGAACTGATGAGAGGGTCAATTTTGTTATaGCAAAACCCATTCTCAATG | + |
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Preference number: 2 (lower is better) Translates to: ILGSLKVMPIGRGRELMRGSILL*QNPFSM Trigger: CATTGAGAATGGGTTTTGTCATAACAAAATTGACCC...TCTCATCAGTTCCCTGCCTCTTCCAATGGGCATCACTTTGAGAGACCCAAGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR-3UTR TCA 90 bp | AAAATTCAGAAAGGATTCCAAGTACCAAGAAAGTCTGGCTTTCAAGAAGGAGCATTGGGTCTCTCAAAGTaGTGCCCATTGGAAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: KIQKGFQVPRKSGFQEGALGLSK*CPLEEA Trigger: TGCCTCTTCCAATGGGCATCACTTTGAGAGACCCAA...TGCTCCTTCTTGAAAGCCAGACTTTCTTGGTACTTGGAATCCTTTCTGAATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR-3UTR TCA 90 bp | AAAATTCAGAAAGGATTCCAAGTACCAAGAAAGTCTGGCTTTCAAGAAGGAGCAGTTGGGGGCACAGTCTaGAGAAAAGAGCTTCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: KIQKGFQVPRKSGFQEGAVGGTV*RKELPV Trigger: AACAGGAAGCTCTTTTCTTCAGACTGTGCCCCCAAC...TGCTCCTTCTTGAAAGCCAGACTTTCTTGGTACTTGGAATCCTTTCTGAATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR-3UTR TCA 90 bp | AAAATTCAGAAAGGATTCCAAGTACCAAGAAAGTCTGGCTTTCAAGAAGGAGCATGCTTCCATTCAGAATaGGGTGGTGGGGGTCAATTT | + |
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Preference number: 2 (lower is better) Translates to: KIQKGFQVPRKSGFQEGACFHSE*GGGGQF Trigger: AAATTGACCCCCACCACCTCATTCTGAATGGAAGCA...TGCTCCTTCTTGAAAGCCAGACTTTCTTGGTACTTGGAATCCTTTCTGAATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR-3UTR CCA 90 bp | AAAATTCAGAAAGGATTCCAAGTACCAAGAAAGTCTGGCTTTCAAGAAGGAGCACAAAGTGATGCCCATTaGAAGAGGCAGGGAACTGAT | + |
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Preference number: 2 (lower is better) Translates to: KIQKGFQVPRKSGFQEGAQSDAH*KRQGTD Trigger: ATCAGTTCCCTGCCTCTTCCAATGGGCATCACTTTG...TGCTCCTTCTTGAAAGCCAGACTTTCTTGGTACTTGGAATCCTTTCTGAATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR-3UTR GCA 90 bp | CCAATGAGTCAGATTTATAACTATCATCTAGCAAGAGACACAGTGATCTCCGAAATTCTCAATGGCCTCTaGCTTGGAGTTGCCTTGAAA | + |
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Preference number: 2 (lower is better) Translates to: PMSQIYNYHLARDTVISEILNGL*LGVALK Trigger: TTTCAAGGCAACTCCAAGGCAGAGGCCATTGAGAAT...TTCGGAGATCACTGTGTCTCTTGCTAGATGATAGTTATAAATCTGACTCATTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR CCA 72 bp | TCCTCAAAACTTGGTCATTTCTCCCAGCACTGTGTCTaGCTAAAGCCACGCTGGGACCTCTTGGTGACAGTA | + |
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Preference number: 3 (lower is better) Translates to: SSKLGHFSQHCV*LKPRWDLLVTV Trigger: TACTGTCACCAAGAGGTCCCAGCGTGGCTTTAGCCAGACACAGTGCTGGGAGAAATGACCAAGTTTTGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR GCA 72 bp | AAGAACTTCTTTGCCACTCTAAAAATTGAGGCACTCTaGCCTCAAGCCACCTCTGCATCTCCACTGCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: KNFFATLKIEAL*PQATSASPLPA Trigger: TGCTGGCAGTGGAGATGCAGAGGTGGCTTGAGGGCAGAGTGCCTCAATTTTTAGAGTGGCAAAGAAGTTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR TCA 72 bp | AAAGAGTCTCAAGAACTTCTTTGCCACTCTAAAAATTaGGGCACTCTGCCCTCAAGCCACCTCTGCATCTCC | + |
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Preference number: 3 (lower is better) Translates to: KESQELLCHSKN*GTLPSSHLCIS Trigger: GGAGATGCAGAGGTGGCTTGAGGGCAGAGTGCCTCAATTTTTAGAGTGGCAAAGAAGTTCTTGAGACTCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR GCA 72 bp | CCAAGCCCTCTTTTGGATAATGCTGAATCTAACGACTaGTTTGTAAGGAAGACTCCCACCAGATACCTGCTG | + |
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Preference number: 3 (lower is better) Translates to: PSPLLDNAESND*FVRKTPTRYLL Trigger: CAGCAGGTATCTGGTGGGAGTCTTCCTTACAAAGCAGTCGTTAGATTCAGCATTATCCAAAAGAGGGCTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR CCA 72 bp | CTAAAGTCCATTCCAGCCATGGTGTTTGATGATTCTTaGGTCTCTCAAAGTGATGCCCATTGGAAGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: LKSIPAMVFDDS*VSQSDAHWKRQ Trigger: CTGCCTCTTCCAATGGGCATCACTTTGAGAGACCCAAGAATCATCAAACACCATGGCTGGAATGGACTTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR TCA 72 bp | AACCCATTCTCAATGGCCTCTGCCTTGGAGTTGCCTTaGAATACAGCTAATCCCATAAACTATGCCCTGACT | + |
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Preference number: 3 (lower is better) Translates to: NPFSMASALELP*NTANPINYALT Trigger: AGTCAGGGCATAGTTTATGGGATTAGCTGTATTTCAAGGCAACTCCAAGGCAGAGGCCATTGAGAATGGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR GCA 72 bp | CCCACCAGATACCTGCTGACTCAAGAATTCAATTACTaGTCAATGGGAATACTGTCAACATTTTTCTGTTCC | + |
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Preference number: 3 (lower is better) Translates to: PTRYLLTQEFNY*SMGILSTFFCS Trigger: GGAACAGAAAAATGTTGACAGTATTCCCATTGAGCAGTAATTGAATTCTTGAGTCAGCAGGTATCTGGTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR CCA 72 bp | AAAAATTCAGAAAGGATTCCAAGTACCAAGAAAGTCTaGCTTTCAAGAAGGAGCAGATGCTTCCAAGCCAAT | + |
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Preference number: 3 (lower is better) Translates to: KNSERIPSTKKV*LSRRSRCFQAN Trigger: ATTGGCTTGGAAGCATCTGCTCCTTCTTGAAAGCCAGACTTTCTTGGTACTTGGAATCCTTTCTGAATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| 3UTR TCA 72 bp | ATCCCTTCAGAAAAGATGGAGCAGTTATTCCACCATTaGATGAGTTATGTTACATTTAGAGTCAGTATGCGG | + |
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Preference number: 3 (lower is better) Translates to: IPSEKMEQLFHH*MSYVTFRVSMR Trigger: CCGCATACTGACTCTAAATGTAACATAACTCATTCAATGGTGGAATAACTGCTCCATCTTTTCTGAAGGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR CCA 90 bp | TTTCTCCCAGCACTGTGTCTGGCTAAAGCCACGCTGGGACCTCTTGGTGACAGTGCCCCAGCCTCCATCTaGAGGGGATGCCAAGCTGAC | + |
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Preference number: 4 (lower is better) Translates to: FLPALCLAKATLGPLGDSAPASI*RGCQAD Trigger: GTCAGCTTGGCATCCCCTCCAGATGGAGGCTGGGGC...ACTGTCACCAAGAGGTCCCAGCGTGGCTTTAGCCAGACACAGTGCTGGGAGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR TCA 90 bp | TTTCTCCCAGCACTGTGTCTGGCTAAAGCCACGCTGGGACCTCTTGGTGACAGTAGGAAAACTGTTCGATaGGGAGCTGAACGACAGGAG | + |
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Preference number: 4 (lower is better) Translates to: FLPALCLAKATLGPLGDSRKTVR*GAERQE Trigger: CTCCTGTCGTTCAGCTCCTCATCGAACAGTTTTCCT...ACTGTCACCAAGAGGTCCCAGCGTGGCTTTAGCCAGACACAGTGCTGGGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR CCA 90 bp | CTAAAGCCACGCTGGGACCTCTTGGTGACAGTAGGTTACATGGCCTTTGAGATCCCATCCTGCAATGGGTaGGCTCACCAAGTATGGCAC | + |
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Preference number: 4 (lower is better) Translates to: LKPRWDLLVTVGYMAFEIPSCNG*AHQVWH Trigger: GTGCCATACTTGGTGAGCCCACCCATTGCAGGATGG...GATCTCAAAGGCCATGTAACCTACTGTCACCAAGAGGTCCCAGCGTGGCTTTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR GCA 90 bp | CTAAAGCCACGCTGGGACCTCTTGGTGACAGTAGGTTACATGGCCTTTGAGATCGCCAAGAATGAGCAGTaGTCCTCGCCAGGAAAACTG | + |
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Preference number: 4 (lower is better) Translates to: LKPRWDLLVTVGYMAFEIAKNEQ*SSPGKL Trigger: CAGTTTTCCTGGCGAGGAGCACTGCTCATTCTTGGC...GATCTCAAAGGCCATGTAACCTACTGTCACCAAGAGGTCCCAGCGTGGCTTTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR TCA 90 bp | CCAGCCATGGTGTTTGATGATTCTTGGGTCTCTCAAAGTGATGCCCATTGGAAGTGTTCGATGAGGAGCTaGACGACAGGAGCCAGGATG | + |
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Preference number: 4 (lower is better) Translates to: PAMVFDDSWVSQSDAHWKCSMRS*TTGARM Trigger: CATCCTGGCTCCTGTCGTTCAGCTCCTCATCGAACA...CTTCCAATGGGCATCACTTTGAGAGACCCAAGAATCATCAAACACCATGGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR GCA 90 bp | CTAAAGCCACGCTGGGACCTCTTGGTGACAGTAGGTTACATGGCCTTTGAGATCAGGTACCAATGCCACTaGCTGACATGGCAATCCCAT | + |
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Preference number: 4 (lower is better) Translates to: LKPRWDLLVTVGYMAFEIRYQCH*LTWQSH Trigger: ATGGGATTGCCATGTCAGGCAGTGGCATTGGTACCT...GATCTCAAAGGCCATGTAACCTACTGTCACCAAGAGGTCCCAGCGTGGCTTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR GCA 90 bp | CCAGCCATGGTGTTTGATGATTCTTGGGTCTCTCAAAGTGATGCCCATTGGAAGACAGAGAAGGAAGGCTaGAGTGTAGCTGCCCGTCGT | + |
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Preference number: 4 (lower is better) Translates to: PAMVFDDSWVSQSDAHWKTEKEG*SVAARR Trigger: ACGACGGGCAGCTACACTGCAGCCTTCCTTCTCTGT...CTTCCAATGGGCATCACTTTGAGAGACCCAAGAATCATCAAACACCATGGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR CCA 90 bp | ATTCTTGGGTCTCTCAAAGTGATGCCCATTGGAAGAGGCAGGGAACTGATGAGATGCCACTGCCTGACATaGCAATCCCATAAGCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ILGSLKVMPIGRGRELMRCHCLT*QSHKPG Trigger: CCCTGGCTTATGGGATTGCCATGTCAGGCAGTGGCA...TCTCATCAGTTCCCTGCCTCTTCCAATGGGCATCACTTTGAGAGACCCAAGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR CCA 90 bp | CCAGCCATGGTGTTTGATGATTCTTGGGTCTCTCAAAGTGATGCCCATTGGAAGCCAGCCATCCTGCAATaGGTGGGCTCACCAAGTATG | + |
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Preference number: 4 (lower is better) Translates to: PAMVFDDSWVSQSDAHWKPAILQ*VGSPSM Trigger: CATACTTGGTGAGCCCACCCATTGCAGGATGGCTGG...CTTCCAATGGGCATCACTTTGAGAGACCCAAGAATCATCAAACACCATGGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR TCA 90 bp | CCAGCCATGGTGTTTGATGATTCTTGGGTCTCTCAAAGTGATGCCCATTGGAAGACCAATGCCACTGCCTaGCATGGCAATCCCATAAGC | + |
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Preference number: 4 (lower is better) Translates to: PAMVFDDSWVSQSDAHWKTNATA*HGNPIS Trigger: GCTTATGGGATTGCCATGTCAGGCAGTGGCATTGGT...CTTCCAATGGGCATCACTTTGAGAGACCCAAGAATCATCAAACACCATGGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR TCA 90 bp | TATGACAAAACCCATTCTCAATGGCCTCTGCCTTGGAGTTGCCTTGAAATACAGCGACAGGAGCCAGGATaGAGGTACCAATGCCACTGC | + |
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Preference number: 4 (lower is better) Translates to: YDKTHSQWPLPWSCLEIQRQEPG*RYQCHC Trigger: GCAGTGGCATTGGTACCTTCATCCTGGCTCCTGTCG...CTGTATTTCAAGGCAACTCCAAGGCAGAGGCCATTGAGAATGGGTTTTGTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR TCA 90 bp | TTTCTCCCAGCACTGTGTCTGGCTAAAGCCACGCTGGGACCTCTTGGTGACAGTTTCTTTGGTCAAAGGTaGATAGGGAGATGCTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: FLPALCLAKATLGPLGDSFFGQR*IGRCLL Trigger: AAGCAAGCATCTCCCTATTCACCTTTGACCAAAGAA...ACTGTCACCAAGAGGTCCCAGCGTGGCTTTAGCCAGACACAGTGCTGGGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR GCA 90 bp | TCAGAAAGGATTCCAAGTACCAAGAAAGTCTGGCTTTCAAGAAGGAGCAGATGCGTCCACCAGCCATCCTaGAATGGGTGGGCTCACCAA | + |
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Preference number: 4 (lower is better) Translates to: SERIPSTKKVWLSRRSRCVHQPS*NGWAHQ Trigger: TTGGTGAGCCCACCCATTGCAGGATGGCTGGTGGAC...GCATCTGCTCCTTCTTGAAAGCCAGACTTTCTTGGTACTTGGAATCCTTTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR CCA 90 bp | CTAAAGCCACGCTGGGACCTCTTGGTGACAGTAGGTTACATGGCCTTTGAGATCTGGGCTCACCAAGTATaGCACTGCATGAAGGAAGTA | + |
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Preference number: 4 (lower is better) Translates to: LKPRWDLLVTVGYMAFEIWAHQV*HCMKEV Trigger: TACTTCCTTCATGCAGTGCCATACTTGGTGAGCCCA...GATCTCAAAGGCCATGTAACCTACTGTCACCAAGAGGTCCCAGCGTGGCTTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR TCA 90 bp | ATTCTTGGGTCTCTCAAAGTGATGCCCATTGGAAGAGGCAGGGAACTGATGAGAAGGATAACTGGTTACTaGCAACACTCCCAAGCGGAG | + |
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Preference number: 4 (lower is better) Translates to: ILGSLKVMPIGRGRELMRRITGY*QHSQAE Trigger: CTCCGCTTGGGAGTGTTGTCAGTAACCAGTTATCCT...TCTCATCAGTTCCCTGCCTCTTCCAATGGGCATCACTTTGAGAGACCCAAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR TCA 90 bp | TCAGAAAGGATTCCAAGTACCAAGAAAGTCTGGCTTTCAAGAAGGAGCAGATGCGGGCTTTCCGTCTGCTaGAATACTTGCCCACCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SERIPSTKKVWLSRRSRCGLSVC*NTCPPW Trigger: CCATGGTGGGCAAGTATTTCAGCAGACGGAAAGCCC...GCATCTGCTCCTTCTTGAAAGCCAGACTTTCTTGGTACTTGGAATCCTTTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR GCA 90 bp | AAAATTCAGAAAGGATTCCAAGTACCAAGAAAGTCTGGCTTTCAAGAAGGAGCAAGGCTGCAGTGTAGCTaGCCGTCGTGTCCACCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KIQKGFQVPRKSGFQEGARLQCS*PSCPPA Trigger: GGCTGGTGGACACGACGGGCAGCTACACTGCAGCCT...TGCTCCTTCTTGAAAGCCAGACTTTCTTGGTACTTGGAATCCTTTCTGAATTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR CCA 90 bp | CCAGCCATGGTGTTTGATGATTCTTGGGTCTCTCAAAGTGATGCCCATTGGAAGAGGCCACTGATCCATTaGTCCACAGTTGTAGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PAMVFDDSWVSQSDAHWKRPLIH*STVVAW Trigger: CCAAGCTACAACTGTGGACCAATGGATCAGTGGCCT...CTTCCAATGGGCATCACTTTGAGAGACCCAAGAATCATCAAACACCATGGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS-3UTR GCA 90 bp | GACTCCCACCAGATACCTGCTGACTCAAGAATTCAATTACTGCTCAATGGGAATGATACATCTGGTGACTaGCCGGGTGCAGATGGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: DSHQIPADSRIQLLLNGNDTSGD*PGADGN Trigger: GTTACCATCTGCACCCGGGCAGTCACCAGATGTATC...ATTCCCATTGAGCAGTAATTGAATTCTTGAGTCAGCAGGTATCTGGTGGGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR GCA 90 bp | TCAGAAAGGATTCCAAGTACCAAGAAAGTCTGGCTTTCAAGAAGGAGCAGATGCGCCCACCATGGCAATTaGCGGAGAGTAACAAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SERIPSTKKVWLSRRSRCAHHGN*RRVTKC Trigger: GCACTTTGTTACTCTCCGGCAATTGCCATGGTGGGC...GCATCTGCTCCTTCTTGAAAGCCAGACTTTCTTGGTACTTGGAATCCTTTCTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS-3UTR CCA 90 bp | GACTCCCACCAGATACCTGCTGACTCAAGAATTCAATTACTGCTCAATGGGAATAGAGGTGCTTCAAGCTaGTGGCAAATGAGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSHQIPADSRIQLLLNGNRGASS*WQMSPG Trigger: TCCTGGGCTCATTTGCCACCAGCTTGAAGCACCTCT...ATTCCCATTGAGCAGTAATTGAATTCTTGAGTCAGCAGGTATCTGGTGGGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS-3UTR CCA 90 bp | CTAAAGCCACGCTGGGACCTCTTGGTGACAGTAGGTTACATGGCCTTTGAGATCGAAGGTTTGAAGCATTaGAAGACACAGATAGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LKPRWDLLVTVGYMAFEIEGLKH*KTQIAQ Trigger: CTGTGCTATCTGTGTCTTCCAATGCTTCAAACCTTC...GATCTCAAAGGCCATGTAACCTACTGTCACCAAGAGGTCCCAGCGTGGCTTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS-3UTR TCA 90 bp | AAAATTCAGAAAGGATTCCAAGTACCAAGAAAGTCTGGCTTTCAAGAAGGAGCAGCAAGCCACCCAGCATaGTCCCCGCTTGACAGGATA | + |
|
Preference number: 4 (lower is better) Translates to: KIQKGFQVPRKSGFQEGAASHPA*SPLDRI Trigger: TATCCTGTCAAGCGGGGATCATGCTGGGTGGCTTGC...TGCTCCTTCTTGAAAGCCAGACTTTCTTGGTACTTGGAATCCTTTCTGAATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS-3UTR TCA 90 bp | AAAATTCAGAAAGGATTCCAAGTACCAAGAAAGTCTGGCTTTCAAGAAGGAGCACCCCGAGGATGGACATaGGGAAAGCAGCTTGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KIQKGFQVPRKSGFQEGAPRGWT*GKQLDG Trigger: ACCATCAAGCTGCTTTCCTCATGTCCATCCTCGGGG...TGCTCCTTCTTGAAAGCCAGACTTTCTTGGTACTTGGAATCCTTTCTGAATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS-3UTR TCA 90 bp | TATGACAAAACCCATTCTCAATGGCCTCTGCCTTGGAGTTGCCTTGAAATACAGAGAAGGGGGAAGGTTTaGAGCATTGGAAGACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: YDKTHSQWPLPWSCLEIQRRGKV*SIGRHR Trigger: TCTGTGTCTTCCAATGCTTCAAACCTTCCCCCTTCT...CTGTATTTCAAGGCAACTCCAAGGCAGAGGCCATTGAGAATGGGTTTTGTCATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS-3UTR CCA 90 bp | GACTCCCACCAGATACCTGCTGACTCAAGAATTCAATTACTGCTCAATGGGAATCTGAAGACAAAGAGGTaGTCCCTACTATCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DSHQIPADSRIQLLLNGNLKTKR*SLLSLQ Trigger: CTGCAGAGATAGTAGGGACCACCTCTTTGTCTTCAG...ATTCCCATTGAGCAGTAATTGAATTCTTGAGTCAGCAGGTATCTGGTGGGAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS-3UTR TCA 90 bp | CCAATGAGTCAGATTTATAACTATCATCTAGCAAGAGACACAGTGATCTCCGAATACAGAGTAGGCCACTaGTCCATTGGTCCACAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PMSQIYNYHLARDTVISEYRVGH*SIGPQL Trigger: CAACTGTGGACCAATGGATCAGTGGCCTACTCTGTA...TTCGGAGATCACTGTGTCTCTTGCTAGATGATAGTTATAAATCTGACTCATTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR GCA 90 bp | TCAGAAAGGATTCCAAGTACCAAGAAAGTCTGGCTTTCAAGAAGGAGCAGATGCCGGAGAGTAACAAAGTaGAAATCCAAGACCTGTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SERIPSTKKVWLSRRSRCRRVTK*KSKTCK Trigger: CTTACAGGTCTTGGATTTGCACTTTGTTACTCTCCG...GCATCTGCTCCTTCTTGAAAGCCAGACTTTCTTGGTACTTGGAATCCTTTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS-3UTR CCA 90 bp | CCAATGAGTCAGATTTATAACTATCATCTAGCAAGAGACACAGTGATCTCCGAACAGTCTACAATGGAATaGATCCATGCTGTTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PMSQIYNYHLARDTVISEQSTME*IHAVWE Trigger: CTCCCAAACAGCATGGATCCATTCCATTGTAGACTG...TTCGGAGATCACTGTGTCTCTTGCTAGATGATAGTTATAAATCTGACTCATTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS-3UTR CCA 90 bp | GACTCCCACCAGATACCTGCTGACTCAAGAATTCAATTACTGCTCAATGGGAATTCATACAGTCTACAATaGAATGGATCCATGCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: DSHQIPADSRIQLLLNGNSYSLQ*NGSMLF Trigger: AAACAGCATGGATCCATTCCATTGTAGACTGTATGA...ATTCCCATTGAGCAGTAATTGAATTCTTGAGTCAGCAGGTATCTGGTGGGAGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| 3UTR CAA 72 bp | AACATCTGTATGATAAGAAAACCCCCAAGCCCTCTTTaGGATAATGCTGAATCTAACGACTGCTTTGTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NICMIRKPPSPL*DNAESNDCFVR Trigger: CCTTACAAAGCAGTCGTTAGATTCAGCATTATCCAAAAGAGGGCTTGGGGGTTTTCTTATCATACAGATGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| 3UTR CAA 72 bp | ATTGGAAGAGGCAGGGAACTGATGAGAGAACATCTGTaGTACACTAATCATTATCATTCAAAGAGTCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: IGRGRELMREHL*YTNHYHSKSLK Trigger: CTTGAGACTCTTTGAATGATAATGATTAGTGTACAACAGATGTTCTCTCATCAGTTCCCTGCCTCTTCCAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS GCA 90 bp | GCCGCAGACGCAGAGATTCAGAACGAACCCGCCAAGAATGAGCAGTaGTCCTCGCCAGGAAAACTGTTCGATGAGGAGCTGAACGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: AADAEIQNEPAKNEQ*SSPGKLFDEELNDR Trigger: CCTGTCGTTCAGCTCCTCATCGAACAGTTTTCCTGGCGAGGAGCACTGCTCATTCTTGGCGGGTTCGTTCTGAATCTCTGCGTCTGCGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS TCA 90 bp | AAGAACTCCCAGGCTGAGGTAGAGGTGCTTCAAGCTGGTGGCAAATaGGCCCAGGATGAAACCAGTAGATGCCAGCAAGCCACCCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KNSQAEVEVLQAGGK*AQDETSRCQQATQH Trigger: ATGCTGGGTGGCTTGCTGGCATCTACTGGTTTCATCCTGGGCTCATTTGCCACCAGCTTGAAGCACCTCTACCTCAGCCTGGGAGTTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS TCA 90 bp | ATGAAACCAGTAGATGCCAGCAAGCCACCCAGCATGATCCCCGCTTaGCAGGATAACTGGTTACTGACAACACTCCCAAGCGGAGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: MKPVDASKPPSMIPA*QDNWLLTTLPSGAQ Trigger: CTGTGCTCCGCTTGGGAGTGTTGTCAGTAACCAGTTATCCTGTCAAGCGGGGATCATGCTGGGTGGCTTGCTGGCATCTACTGGTTTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS TCA 90 bp | CACCAAGTATGGCACTGCATGAAGGAAGTAGACCACGCCAAGTGCTaGAGACAAAGAGGTGGTCCCTACTATCTCTGCAGTCACGACCGG | + |
|
Preference number: 5 (lower is better) Translates to: HQVWHCMKEVDHAKC*RQRGGPYYLCSHDR Trigger: CCGGTCGTGACTGCAGAGATAGTAGGGACCACCTCTTTGTCTTCAGCACTTGGCGTGGTCTACTTCCTTCATGCAGTGCCATACTTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS GCA 90 bp | CAGGATGGAACTAAATATCATGGCAAATCCACAGAGAAGGAAGGCTaGAGTGTAGCTGCCCGTCGTGTCCACCAGCCATCCTGCAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: QDGTKYHGKSTEKEG*SVAARRVHQPSCNG Trigger: CCCATTGCAGGATGGCTGGTGGACACGACGGGCAGCTACACTGCAGCCTTCCTTCTCTGTGGATTTGCCATGATATTTAGTTCCATCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS TCA 90 bp | CACTGCCTGACATGGCAATCCCATAAGCCAGGGCTTTCCGTCTGCTaGAATACTTGCCCACCATGGCAATTGCCGGAGAGTAACAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HCLTWQSHKPGLSVC*NTCPPWQLPESNKV Trigger: CACTTTGTTACTCTCCGGCAATTGCCATGGTGGGCAAGTATTTCAGCAGACGGAAAGCCCTGGCTTATGGGATTGCCATGTCAGGCAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS TCA 90 bp | CATAAGGCACTAGGTACACAAAGAGAGGGCTGCAGCCGTAGGCCATaGACAGAACAGAGACGGCCAACACGACGAAGTCTGACATCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: HKALGTQREGCSRRP*TEQRRPTRRSLTSV Trigger: TACTGATGTCAGACTTCGTCGTGTTGGCCGTCTCTGTTCTGTTCATGGCCTACGGCTGCAGCCCTCTCTTTGTGTACCTAGTGCCTTATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS GCA 90 bp | AGCCAGGGCTTTCCGTCTGCTGAAATACTTGCCCACCATGGCAATTaGCGGAGAGTAACAAAGTGCAAATCCAAGACCTGTAAGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQGFPSAEILAHHGN*RRVTKCKSKTCKNS Trigger: GGAGTTCTTACAGGTCTTGGATTTGCACTTTGTTACTCTCCGGCAATTGCCATGGTGGGCAAGTATTTCAGCAGACGGAAAGCCCTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR CAA 90 bp | CCAGCCATGGTGTTTGATGATTCTTGGGTCTCTCAAAGTGATGCCCATTGGAAGCGTCTGCTGAAATACTaGCCCACCATGGCAATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: PAMVFDDSWVSQSDAHWKRLLKY*PTMAIA Trigger: GGCAATTGCCATGGTGGGCAAGTATTTCAGCAGACG...CTTCCAATGGGCATCACTTTGAGAGACCCAAGAATCATCAAACACCATGGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR CAA 90 bp | TTTCTCCCAGCACTGTGTCTGGCTAAAGCCACGCTGGGACCTCTTGGTGACAGTGTTCTCTTCATCCTCTaGACAATTCTAACGAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FLPALCLAKATLGPLGDSVLFIL*TILTKP Trigger: TGGCTTCGTTAGAATTGTCAAGAGGATGAAGAGAAC...ACTGTCACCAAGAGGTCCCAGCGTGGCTTTAGCCAGACACAGTGCTGGGAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR CAA 90 bp | ATTCTTGGGTCTCTCAAAGTGATGCCCATTGGAAGAGGCAGGGAACTGATGAGAGACCGGGAAAGGCACTaGTGTTCTCTTCATCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ILGSLKVMPIGRGRELMRDRERH*CSLHPL Trigger: AAGAGGATGAAGAGAACACAAGTGCCTTTCCCGGTC...TCTCATCAGTTCCCTGCCTCTTCCAATGGGCATCACTTTGAGAGACCCAAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR CAA 90 bp | ATTCTTGGGTCTCTCAAAGTGATGCCCATTGGAAGAGGCAGGGAACTGATGAGATCTGATCTAACTCCCTaGCTACAGAGTAGGCCACTG | + |
|
Preference number: 5 (lower is better) Translates to: ILGSLKVMPIGRGRELMRSDLTP*LQSRPL Trigger: CAGTGGCCTACTCTGTAGCAAGGGAGTTAGATCAGA...TCTCATCAGTTCCCTGCCTCTTCCAATGGGCATCACTTTGAGAGACCCAAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS TCA 90 bp | CAAGGAGCAGCAAAGACGGGTCTCTGTACATTCTTTGGTCAAAGGTaGATAGGGAGATGCTTGCTTACAGTCTTCTCGCTGAGATTCACG | + |
|
Preference number: 5 (lower is better) Translates to: QGAAKTGLCTFFGQR*IGRCLLTVFSLRFT Trigger: CGTGAATCTCAGCGAGAAGACTGTAAGCAAGCATCTCCCTATTCACCTTTGACCAAAGAATGTACAGAGACCCGTCTTTGCTGCTCCTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR CAA 90 bp | TATGACAAAACCCATTCTCAATGGCCTCTGCCTTGGAGTTGCCTTGAAATACAGTGCCCACCATGGCAATaGCCGGAGAGTAACAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: YDKTHSQWPLPWSCLEIQCPPWQ*PESNKV Trigger: CACTTTGTTACTCTCCGGCAATTGCCATGGTGGGCA...CTGTATTTCAAGGCAACTCCAAGGCAGAGGCCATTGAGAATGGGTTTTGTCATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR CAA 90 bp | ATTCTTGGGTCTCTCAAAGTGATGCCCATTGGAAGAGGCAGGGAACTGATGAGAAAGAAGGGGGAAGGTTaGAAGCATTGGAAGACACAG | + |
|
Preference number: 5 (lower is better) Translates to: ILGSLKVMPIGRGRELMRKKGEG*KHWKTQ Trigger: CTGTGTCTTCCAATGCTTCAAACCTTCCCCCTTCTT...TCTCATCAGTTCCCTGCCTCTTCCAATGGGCATCACTTTGAGAGACCCAAGAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS CCA 90 bp | CAACACTCCCAAGCGGAGCACAGAGCATTGTCATACAGTCTACAATaGAATGGATCCATGCTGTTTGGGAGTAATCCTGAGCAAAGTATG | + |
|
Preference number: 5 (lower is better) Translates to: QHSQAEHRALSYSLQ*NGSMLFGSNPEQSM Trigger: CATACTTTGCTCAGGATTACTCCCAAACAGCATGGATCCATTCCATTGTAGACTGTATGACAATGCTCTGTGCTCCGCTTGGGAGTGTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR CAA 90 bp | ATTCTTGGGTCTCTCAAAGTGATGCCCATTGGAAGAGGCAGGGAACTGATGAGAATGGATCCATGCTGTTaGGGAGTAATCCTGAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: ILGSLKVMPIGRGRELMRMDPCC*GVILSK Trigger: TTTGCTCAGGATTACTCCCAAACAGCATGGATCCAT...TCTCATCAGTTCCCTGCCTCTTCCAATGGGCATCACTTTGAGAGACCCAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR CAA 90 bp | GACTCCCACCAGATACCTGCTGACTCAAGAATTCAATTACTGCTCAATGGGAATCAGCCAAATGTGATATaGCCAACAATATCGATTACC | + |
|
Preference number: 5 (lower is better) Translates to: DSHQIPADSRIQLLLNGNQPNVI*PTISIT Trigger: GGTAATCGATATTGTTGGCAATATCACATTTGGCTG...ATTCCCATTGAGCAGTAATTGAATTCTTGAGTCAGCAGGTATCTGGTGGGAGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS-3UTR CAA 90 bp | CCAATGAGTCAGATTTATAACTATCATCTAGCAAGAGACACAGTGATCTCCGAAGGAAGGTTTGAAGCATaGGAAGACACAGATAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PMSQIYNYHLARDTVISEGRFEA*EDTDST Trigger: TGTGCTATCTGTGTCTTCCAATGCTTCAAACCTTCC...TTCGGAGATCACTGTGTCTCTTGCTAGATGATAGTTATAAATCTGACTCATTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS TCA 72 bp | CAGGCTGAGGTAGAGGTGCTTCAAGCTGGTGGCAAATaGGCCCAGGATGAAACCAGTAGATGCCAGCAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: QAEVEVLQAGGK*AQDETSRCQQA Trigger: GGCTTGCTGGCATCTACTGGTTTCATCCTGGGCTCATTTGCCACCAGCTTGAAGCACCTCTACCTCAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS TCA 72 bp | CTAGGTACACAAAGAGAGGGCTGCAGCCGTAGGCCATaGACAGAACAGAGACGGCCAACACGACGAAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGTQREGCSRRP*TEQRRPTRRSL Trigger: CAGACTTCGTCGTGTTGGCCGTCTCTGTTCTGTTCATGGCCTACGGCTGCAGCCCTCTCTTTGTGTACCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS TCA 72 bp | GTAGATGCCAGCAAGCCACCCAGCATGATCCCCGCTTaGCAGGATAACTGGTTACTGACAACACTCCCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: VDASKPPSMIPA*QDNWLLTTLPS Trigger: GCTTGGGAGTGTTGTCAGTAACCAGTTATCCTGTCAAGCGGGGATCATGCTGGGTGGCTTGCTGGCATCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS GCA 72 bp | GCAGAGATTCAGAACGAACCCGCCAAGAATGAGCAGTaGTCCTCGCCAGGAAAACTGTTCGATGAGGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AEIQNEPAKNEQ*SSPGKLFDEEL Trigger: CAGCTCCTCATCGAACAGTTTTCCTGGCGAGGAGCACTGCTCATTCTTGGCGGGTTCGTTCTGAATCTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS CCA 72 bp | GGAAGTAGACCACGCCAAGTGCTGAAGACAAAGAGGTaGTCCCTACTATCTCTGCAGTCACGACCGGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: GSRPRQVLKTKR*SLLSLQSRPGS Trigger: TGATCCCGGTCGTGACTGCAGAGATAGTAGGGACCACCTCTTTGTCTTCAGCACTTGGCGTGGTCTACTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS TCA 72 bp | ACATGGCAATCCCATAAGCCAGGGCTTTCCGTCTGCTaGAATACTTGCCCACCATGGCAATTGCCGGAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: TWQSHKPGLSVC*NTCPPWQLPES Trigger: ACTCTCCGGCAATTGCCATGGTGGGCAAGTATTTCAGCAGACGGAAAGCCCTGGCTTATGGGATTGCCATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS GCA 72 bp | CTTGCCCACCATGGCAATTGCCGGAGAGTAACAAAGTaGAAATCCAAGACCTGTAAGAACTCCCAGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: LAHHGNCRRVTK*KSKTCKNSQAE Trigger: CTCAGCCTGGGAGTTCTTACAGGTCTTGGATTTGCACTTTGTTACTCTCCGGCAATTGCCATGGTGGGCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS CAA 72 bp | ATCGATTACCCCGAGGATGGACATGAGGAAAGCAGCTaGATGGTGGCTCACTCCGACACTCAAAGCATAAGG | + |
|
Preference number: 6 (lower is better) Translates to: IDYPEDGHEESS*MVAHSDTQSIR Trigger: CCTTATGCTTTGAGTGTCGGAGTGAGCCACCATCAAGCTGCTTTCCTCATGTCCATCCTCGGGGTAATCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS CAA 72 bp | CCATTGGTCCACAGTTGTAGCTTGGGATCTGAGTCTTaGACCGGGAAAGGCACTTGTGTTCTCTTCATCCTC | + |
|
Preference number: 6 (lower is better) Translates to: PLVHSCSLGSES*TGKGTCVLFIL Trigger: GAGGATGAAGAGAACACAAGTGCCTTTCCCGGTCAAAGACTCAGATCCCAAGCTACAACTGTGGACCAATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS TCA 72 bp | CATTGGTCCACAGTTGTAGCTTGGGATCTGAGTCTTTaGCCGGGAAAGGCACTTGTGTTCTCTTCATCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: HWSTVVAWDLSL*PGKALVFSSSS Trigger: AGAGGATGAAGAGAACACAAGTGCCTTTCCCGGTCAAAGACTCAGATCCCAAGCTACAACTGTGGACCAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS CAA 90 bp | GCCACTGATCCATTGGTCCACAGTTGTAGCTTGGGATCTGAGTCTTaGACCGGGAAAGGCACTTGTGTTCTCTTCATCCTCTTGACAATT | + |
|
Preference number: 6 (lower is better) Translates to: ATDPLVHSCSLGSES*TGKGTCVLFILLTI Trigger: AATTGTCAAGAGGATGAAGAGAACACAAGTGCCTTTCCCGGTCAAAGACTCAGATCCCAAGCTACAACTGTGGACCAATGGATCAGTGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
||
| CDS TCA 72 bp | GCAAAGACGGGTCTCTGTACATTCTTTGGTCAAAGGTaGATAGGGAGATGCTTGCTTACAGTCTTCTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AKTGLCTFFGQR*IGRCLLTVFSL Trigger: CAGCGAGAAGACTGTAAGCAAGCATCTCCCTATTCACCTTTGACCAAAGAATGTACAGAGACCCGTCTTTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS GCA 72 bp | TTTCCGTCTGCTGAAATACTTGCCCACCATGGCAATTaGCGGAGAGTAACAAAGTGCAAATCCAAGACCTGT | + |
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Preference number: 6 (lower is better) Translates to: FPSAEILAHHGN*RRVTKCKSKTC Trigger: ACAGGTCTTGGATTTGCACTTTGTTACTCTCCGGCAATTGCCATGGTGGGCAAGTATTTCAGCAGACGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS CAA 72 bp | AAAGGTACAAGAGAAAGGCACAAGAAGGGGGAAGGTTaGAAGCATTGGAAGACACAGATAGCACAGCCCATC | + |
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Preference number: 6 (lower is better) Translates to: KGTRERHKKGEG*KHWKTQIAQPI Trigger: GATGGGCTGTGCTATCTGTGTCTTCCAATGCTTCAAACCTTCCCCCTTCTTGTGCCTTTCTCTTGTACCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS CAA 72 bp | AGACACCTTCTGTCAGTTAGCCAGCCAAATGTGATATaGCCAACAATATCGATTACCCCGAGGATGGACATG | + |
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Preference number: 6 (lower is better) Translates to: RHLLSVSQPNVI*PTISITPRMDM Trigger: CATGTCCATCCTCGGGGTAATCGATATTGTTGGCAATATCACATTTGGCTGGCTAACTGACAGAAGGTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS CAA 72 bp | TTGACCGGGAAAGGCACTTGTGTTCTCTTCATCCTCTaGACAATTCTAACGAAGCCAAGCAGGATGGAACTA | + |
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Preference number: 6 (lower is better) Translates to: LTGKGTCVLFIL*TILTKPSRMEL Trigger: TAGTTCCATCCTGCTTGGCTTCGTTAGAATTGTCAAGAGGATGAAGAGAACACAAGTGCCTTTCCCGGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS CAA 90 bp | TCTGAGTCTTTGACCGGGAAAGGCACTTGTGTTCTCTTCATCCTCTaGACAATTCTAACGAAGCCAAGCAGGATGGAACTAAATATCATG | + |
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Preference number: 6 (lower is better) Translates to: SESLTGKGTCVLFIL*TILTKPSRMELNIM Trigger: CATGATATTTAGTTCCATCCTGCTTGGCTTCGTTAGAATTGTCAAGAGGATGAAGAGAACACAAGTGCCTTTCCCGGTCAAAGACTCAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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| CDS CAA 72 bp | TGTCATACAGTCTACAATGGAATGGATCCATGCTGTTaGGGAGTAATCCTGAGCAAAGTATGTCTGAAACTC | + |
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Preference number: 6 (lower is better) Translates to: CHTVYNGMDPCC*GVILSKVCLKL Trigger: GAGTTTCAGACATACTTTGCTCAGGATTACTCCCAAACAGCATGGATCCATTCCATTGTAGACTGTATGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000009522.4 |
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