Pregenerated sensors for SLC15A5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044378Ensembl transcript IDs: ENSMUST00000111873.8, ENSMUST00000141280.3, ENSMUST00000150278.3, ENSMUST00000171804.4
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTCATTTGCATGTTTATATACTCTCAAAGTCCATGAACCACATCTaGGTGGGCGCATTTGTGAGTGTGCCTGAGTTAGAGGCAGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: SHLHVYILSKSMNHI*VGAFVSVPELEAGR Trigger: CCTCCCTGCCTCTAACTCAGGCACACTCACAAATGCGCCCACCCAGATGTGGTTCATGGACTTTGAGAGTATATAAACATGCAAATGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150278.3 |
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| 3UTR CCA 90 bp | GAGGGATTGTGGAGGGTGAATTTTCACAAAGCGGGCTGTAGTTCATaGTCTTCCAGATTCATTTCTGTCTACTTCTCTCTGACCCAAAGG | + |
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Preference number: 1 (lower is better) Translates to: EGLWRVNFHKAGCSS*SSRFISVYFSLTQR Trigger: CCTTTGGGTCAGAGAGAAGTAGACAGAAATGAATCTGGAAGACCATGAACTACAGCCCGCTTTGTGAAAATTCACCCTCCACAATCCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150278.3 |
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| 3UTR GCA 90 bp | CCTAGAGAGGCATCTGTCTGTATTTCCACTTCTTTGATCATCCTCTaGTACATAGTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCT | + |
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Preference number: 1 (lower is better) Translates to: PREASVCISTSLIIL*YIVKFEGSLGSMRS Trigger: AGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAACTATGTAGCAGAGGATGATCAAAGAAGTGGAAATACAGACAGATGCCTCTCTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
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| 3UTR-3UTR TCA 90 bp | TGGCCTAGAGAGGCATCTGTCTGTATTTCCACTTCTTTGATCATCCTCTGCTACCCAAAGATCAATACTTaGAGATGCTCCCTGTGTACT | + |
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Preference number: 2 (lower is better) Translates to: WPREASVCISTSLIILCYPKINT*RCSLCT Trigger: AGTACACAGGGAGCATCTTCAAGTATTGATCTTTGG...GTAGCAGAGGATGATCAAAGAAGTGGAAATACAGACAGATGCCTCTCTAGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111873.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGCATGTTTATATACTCTCAAAGTCCATGAACCACATCTGGGTGGGCGCATTCTGTCTACTTCTCTCTaGCCCAAAGGTCTTGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: FACLYTLKVHEPHLGGRILSTSL*PKGLGF Trigger: AAAGCCAAGACCTTTGGGTCAGAGAGAAGTAGACAG...AATGCGCCCACCCAGATGTGGTTCATGGACTTTGAGAGTATATAAACATGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150278.3 |
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| 3UTR-3UTR CCA 90 bp | GTCTGTATTTCCACTTCTTTGATCATCCTCTGCTACATAGTTAAGTTTGAGGGCATTGACACGCTAACATaGAAAATGATTGTTTCCGGT | + |
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Preference number: 2 (lower is better) Translates to: VCISTSLIILCYIVKFEGIDTLT*KMIVSG Trigger: ACCGGAAACAATCATTTTCCATGTTAGCGTGTCAAT...GCCCTCAAACTTAACTATGTAGCAGAGGATGATCAAAGAAGTGGAAATACAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
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| 3UTR TCA 72 bp | GAACCACATCTGGGTGGGCGCATTTGTGAGTGTGCCTaGGTTAGAGGCAGGGAGGGATTGTGGAGGGTGAAT | + |
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Preference number: 3 (lower is better) Translates to: EPHLGGRICECA*VRGREGLWRVN Trigger: ATTCACCCTCCACAATCCCTCCCTGCCTCTAACTCAGGCACACTCACAAATGCGCCCACCCAGATGTGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150278.3 |
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| 3UTR TCA 72 bp | GTGCCTGAGTTAGAGGCAGGGAGGGATTGTGGAGGGTaGATTTTCACAAAGCGGGCTGTAGTTCATGGTCTT | + |
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Preference number: 3 (lower is better) Translates to: VPELEAGRDCGG*IFTKRAVVHGL Trigger: AAGACCATGAACTACAGCCCGCTTTGTGAAAATTCACCCTCCACAATCCCTCCCTGCCTCTAACTCAGGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150278.3 |
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| 3UTR-3UTR CAA 90 bp | TTTGCATGTTTATATACTCTCAAAGTCCATGAACCACATCTGGGTGGGCGCATTAGAGGCAGGGAGGGATaGTGGAGGGTGAATTTTCAC | + |
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Preference number: 3 (lower is better) Translates to: FACLYTLKVHEPHLGGRIRGREG*WRVNFH Trigger: GTGAAAATTCACCCTCCACAATCCCTCCCTGCCTCT...AATGCGCCCACCCAGATGTGGTTCATGGACTTTGAGAGTATATAAACATGCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150278.3 |
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| 3UTR GCA 72 bp | GCATCTGTCTGTATTTCCACTTCTTTGATCATCCTCTaGTACATAGTTAAGTTTGAGGGCAGCCTGGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: ASVCISTSLIIL*YIVKFEGSLGS Trigger: AGAGCCCAGGCTGCCCTCAAACTTAACTATGTAGCAGAGGATGATCAAAGAAGTGGAAATACAGACAGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
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| 3UTR CCA 72 bp | CATGTTTATATACTCTCAAAGTCCATGAACCACATCTaGGTGGGCGCATTTGTGAGTGTGCCTGAGTTAGAG | + |
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Preference number: 3 (lower is better) Translates to: HVYILSKSMNHI*VGAFVSVPELE Trigger: CTCTAACTCAGGCACACTCACAAATGCGCCCACCCAGATGTGGTTCATGGACTTTGAGAGTATATAAACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150278.3 |
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| 3UTR-3UTR CAA 90 bp | ATAGTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATACACTCTTCTTTATGTaGACTTTCCCAGTGAAACGT | + |
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Preference number: 3 (lower is better) Translates to: IVKFEGSLGSMRSCPKPDTLFFM*TFPVKR Trigger: ACGTTTCACTGGGAAAGTCAACATAAAGAAGAGTGT...ATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAACTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
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| 3UTR-3UTR CAA 90 bp | GTCTGTATTTCCACTTCTTTGATCATCCTCTGCTACATAGTTAAGTTTGAGGGCCCCAAAGATCAATACTaGAAGATGCTCCCTGTGTAC | + |
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Preference number: 3 (lower is better) Translates to: VCISTSLIILCYIVKFEGPKDQY*KMLPVY Trigger: GTACACAGGGAGCATCTTCAAGTATTGATCTTTGGG...GCCCTCAAACTTAACTATGTAGCAGAGGATGATCAAAGAAGTGGAAATACAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111873.8 |
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| CDS-3UTR GCA 90 bp | ATGAACCACATCTGGGTGGGCGCATTTGTGAGTGTGCCTGAGTTAGAGGCAGGGTTGCCTGAAGGAGACTaGTCCCGGGCAAGTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: MNHIWVGAFVSVPELEAGLPEGD*SRASFL Trigger: CAGAAAACTTGCCCGGGAGCAGTCTCCTTCAGGCAA...CCCTGCCTCTAACTCAGGCACACTCACAAATGCGCCCACCCAGATGTGGTTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150278.3 |
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| CDS-3UTR TCA 90 bp | CAGTTAGGTGAGATCTCCCCATCTCTCAGGAGTCCGAGCTGTGATTCTGCCTCTACAGGATCTGGAAGCTaGAGAGAGGCAAAAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: QLGEISPSLRSPSCDSASTGSGS*REAKGQ Trigger: CTGCCCTTTTGCCTCTCTTCAGCTTCCAGATCCTGT...AGAGGCAGAATCACAGCTCGGACTCCTGAGAGATGGGGAGATCTCACCTAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000141280.3 |
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| CDS-3UTR CCA 90 bp | ATGAACCACATCTGGGTGGGCGCATTTGTGAGTGTGCCTGAGTTAGAGGCAGGGAAGCAGCACATACTGTaGAACCAGACAGACACAGGC | + |
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Preference number: 4 (lower is better) Translates to: MNHIWVGAFVSVPELEAGKQHIL*NQTDTG Trigger: GCCTGTGTCTGTCTGGTTCCACAGTATGTGCTGCTT...CCCTGCCTCTAACTCAGGCACACTCACAAATGCGCCCACCCAGATGTGGTTCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150278.3 |
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| CDS-3UTR TCA 90 bp | GTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATAAGAGAGAAAAGTTTGCCTaGAGGAGACTGCTCCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: VKFEGSLGSMRSCPKPDKREKFA*RRLLPG Trigger: GCCCGGGAGCAGTCTCCTTCAGGCAAACTTTTCTCT...CTTATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
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| CDS-3UTR CCA 90 bp | TTAGGTGAGATCTCCCCATCTCTCAGGAGTCCGAGCTGTGATTCTGCCTCTCAGCTTGTGTCTTCCTCTTaGAGTTCACTGTGGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LGEISPSLRSPSCDSASQLVSSS*SSLWCP Trigger: TGGACACCACAGTGAACTCCAAGAGGAAGACACAAG...CTGAGAGGCAGAATCACAGCTCGGACTCCTGAGAGATGGGGAGATCTCACCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141280.3 |
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| CDS-3UTR CCA 90 bp | GGTGAGATCTCCCCATCTCTCAGGAGTCCGAGCTGTGATTCTGCCTCTCAGACAGTTCTGTACAGGATCTaGAAGCTGAAGAGAGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: GEISPSLRSPSCDSASQTVLYRI*KLKRGK Trigger: TTTGCCTCTCTTCAGCTTCCAGATCCTGTACAGAAC...TGTCTGAGAGGCAGAATCACAGCTCGGACTCCTGAGAGATGGGGAGATCTCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141280.3 |
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| CDS-3UTR GCA 90 bp | TGGCCTAGAGAGGCATCTGTCTGTATTTCCACTTCTTTGATCATCCTCTGCTACCCCACTGTCTTCCACTaGTCAGGGCCACCATGTAAG | + |
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Preference number: 4 (lower is better) Translates to: WPREASVCISTSLIILCYPTVFH*SGPPCK Trigger: CTTACATGGTGGCCCTGAGCAGTGGAAGACAGTGGG...GTAGCAGAGGATGATCAAAGAAGTGGAAATACAGACAGATGCCTCTCTAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS-3UTR GCA 90 bp | ATAGTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATCAAGTTGAGCATGGCTaGCTGGTGGTTGTAGGAGCC | + |
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Preference number: 4 (lower is better) Translates to: IVKFEGSLGSMRSCPKPDQVEHG*LVVVGA Trigger: GGCTCCTACAACCACCAGGCAGCCATGCTCAACTTG...ATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS-3UTR GCA 90 bp | ATAGTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATCCCTTATTCCTCCTGTaGCCAGGCAGAGAGTCAGCA | + |
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Preference number: 4 (lower is better) Translates to: IVKFEGSLGSMRSCPKPDPLFLL*PGRESA Trigger: TGCTGACTCTCTGCCTGGGCACAGGAGGAATAAGGG...ATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS-3UTR TCA 90 bp | CATGTTTATATACTCTCAAAGTCCATGAACCACATCTGGGTGGGCGCATTTGTGAGAGAAAAGTTTGCCTaGAGGAGACTGCTCCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: HVYILSKSMNHIWVGAFVREKFA*RRLLPG Trigger: GCCCGGGAGCAGTCTCCTTCAGGCAAACTTTTCTCT...CACAAATGCGCCCACCCAGATGTGGTTCATGGACTTTGAGAGTATATAAACATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150278.3 |
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| CDS-3UTR TCA 90 bp | TGGCCTAGAGAGGCATCTGTCTGTATTTCCACTTCTTTGATCATCCTCTGCTACCCTGGGATGACTCTGTaGGTTACCATGGAGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: WPREASVCISTSLIILCYPGMTL*VTMETA Trigger: TGCTGTCTCCATGGTAACTCACAGAGTCATCCCAGG...GTAGCAGAGGATGATCAAAGAAGTGGAAATACAGACAGATGCCTCTCTAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
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| CDS-3UTR CCA 90 bp | GTGAGATCTCCCCATCTCTCAGGAGTCCGAGCTGTGATTCTGCCTCTCAGACACTCCGGTTGGAATTCATaGTCTGAAGATAATATCCTG | + |
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Preference number: 4 (lower is better) Translates to: VRSPHLSGVRAVILPLRHSGWNS*SEDNIL Trigger: CAGGATATTATCTTCAGACCATGAATTCCAACCGGA...GTGTCTGAGAGGCAGAATCACAGCTCGGACTCCTGAGAGATGGGGAGATCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141280.3 |
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| CDS-3UTR TCA 90 bp | GTCTCACAAGAGAATCAAATCCAGTTTCAGAGGGCTGTCTCCCAAAGATCAATAAGAGAAAAGTTTGCCTaGAGGAGACTGCTCCCGGGC | + |
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Preference number: 4 (lower is better) Translates to: VSQENQIQFQRAVSQRSIREKFA*RRLLPG Trigger: GCCCGGGAGCAGTCTCCTTCAGGCAAACTTTTCTCT...TATTGATCTTTGGGAGACAGCCCTCTGAAACTGGATTTGATTCTCTTGTGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111873.8 |
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| CDS-3UTR GCA 90 bp | ATAGTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATCAGAAAGACAACAGCTaGATTCAGGTTCGCGGACCA | + |
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Preference number: 4 (lower is better) Translates to: IVKFEGSLGSMRSCPKPDQKDNS*IQVRGP Trigger: TGGTCCGCGAACCTGAATGCAGCTGTTGTCTTTCTG...ATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAACTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS-3UTR CCA 90 bp | GTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATAAGCTTGTGTCTTCCTCTTaGAGTTCACTGTGGTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: VKFEGSLGSMRSCPKPDKLVSSS*SSLWCP Trigger: TGGACACCACAGTGAACTCCAAGAGGAAGACACAAG...CTTATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS-3UTR TCA 90 bp | CTCTTCTTTATGTTGACTTTCCCAGTGAAACGTATGAAGTATTCGATTGAAGAACACGGATGCGCTCCATaGAGCCCTCCAGAGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LFFMLTFPVKRMKYSIEEHGCAP*SPPESQ Trigger: CTGGGACTCTGGAGGGCTTCATGGAGCGCATCCGTG...TTCTTCAATCGAATACTTCATACGTTTCACTGGGAAAGTCAACATAAAGAAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111873.8 |
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| CDS-3UTR CCA 90 bp | ATAGTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATCTGGAAAAGCCAGCATaGATAACAAGGCAGTGCCTA | + |
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Preference number: 4 (lower is better) Translates to: IVKFEGSLGSMRSCPKPDLEKPA*ITRQCL Trigger: TAGGCACTGCCTTGTTATCCATGCTGGCTTTTCCAG...ATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAACTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS-3UTR TCA 90 bp | GTCTGTATTTCCACTTCTTTGATCATCCTCTGCTACATAGTTAAGTTTGAGGGCCCTGGGATGACTCTGTaGGTTACCATGGAGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: VCISTSLIILCYIVKFEGPGMTL*VTMETA Trigger: TGCTGTCTCCATGGTAACTCACAGAGTCATCCCAGG...GCCCTCAAACTTAACTATGTAGCAGAGGATGATCAAAGAAGTGGAAATACAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
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| CDS-3UTR TCA 90 bp | TGGCCTAGAGAGGCATCTGTCTGTATTTCCACTTCTTTGATCATCCTCTGCTACTCAGAGACTTCTCAGTaGGGAGAAGAGTTTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: WPREASVCISTSLIILCYSETSQ*GEEFLH Trigger: GTGAAGAAACTCTTCTCCTCACTGAGAAGTCTCTGA...GTAGCAGAGGATGATCAAAGAAGTGGAAATACAGACAGATGCCTCTCTAGGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
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| CDS-3UTR TCA 90 bp | GTCTGTATTTCCACTTCTTTGATCATCCTCTGCTACATAGTTAAGTTTGAGGGCACAGGATCTGGAAGCTaGAGAGAGGCAAAAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VCISTSLIILCYIVKFEGTGSGS*REAKGQ Trigger: CTGCCCTTTTGCCTCTCTTCAGCTTCCAGATCCTGT...GCCCTCAAACTTAACTATGTAGCAGAGGATGATCAAAGAAGTGGAAATACAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS-3UTR TCA 90 bp | GTCTGTATTTCCACTTCTTTGATCATCCTCTGCTACATAGTTAAGTTTGAGGGCTGGCATTGGCTTCTTTaGTTCCCGTTCCTGACTGCC | + |
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Preference number: 4 (lower is better) Translates to: VCISTSLIILCYIVKFEGWHWLL*FPFLTA Trigger: GGCAGTCAGGAACGGGAATCAAAGAAGCCAATGCCA...GCCCTCAAACTTAACTATGTAGCAGAGGATGATCAAAGAAGTGGAAATACAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS-3UTR GCA 90 bp | GTCTGTATTTCCACTTCTTTGATCATCCTCTGCTACATAGTTAAGTTTGAGGGCAGCCAAGCCTCCCTGTaGAAAAGGGGATCATGTTGC | + |
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Preference number: 4 (lower is better) Translates to: VCISTSLIILCYIVKFEGSQASL*KRGSCC Trigger: GCAACATGATCCCCTTTTGCACAGGGAGGCTTGGCT...GCCCTCAAACTTAACTATGTAGCAGAGGATGATCAAAGAAGTGGAAATACAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS-3UTR CCA 90 bp | ATAGTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATGTTCTGTACAGGATCTaGAAGCTGAAGAGAGGCAAA | + |
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Preference number: 4 (lower is better) Translates to: IVKFEGSLGSMRSCPKPDVLYRI*KLKRGK Trigger: TTTGCCTCTCTTCAGCTTCCAGATCCTGTACAGAAC...ATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAACTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS-3UTR TCA 90 bp | GTCTGTATTTCCACTTCTTTGATCATCCTCTGCTACATAGTTAAGTTTGAGGGCCAAGGGCTGGATGCTTaGGATTCCCAGAAAGACAAC | + |
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Preference number: 4 (lower is better) Translates to: VCISTSLIILCYIVKFEGQGLDA*DSQKDN Trigger: GTTGTCTTTCTGGGAATCTCAAGCATCCAGCCCTTG...GCCCTCAAACTTAACTATGTAGCAGAGGATGATCAAAGAAGTGGAAATACAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS-3UTR GCA 90 bp | ATAGTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATATGCTCCCTGTGTACTaGCATAAAACTTCAGAGACT | + |
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Preference number: 4 (lower is better) Translates to: IVKFEGSLGSMRSCPKPDMLPVY*HKTSET Trigger: AGTCTCTGAAGTTTTATGGCAGTACACAGGGAGCAT...ATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAACTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS-3UTR CCA 90 bp | GTCTGTATTTCCACTTCTTTGATCATCCTCTGCTACATAGTTAAGTTTGAGGGCAAGCAGCACATACTGTaGAACCAGACAGACACAGGC | + |
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Preference number: 4 (lower is better) Translates to: VCISTSLIILCYIVKFEGKQHIL*NQTDTG Trigger: GCCTGTGTCTGTCTGGTTCCACAGTATGTGCTGCTT...GCCCTCAAACTTAACTATGTAGCAGAGGATGATCAAAGAAGTGGAAATACAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
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| CDS-3UTR CCA 90 bp | GTCTCACAAGAGAATCAAATCCAGTTTCAGAGGGCTGTCTCCCAAAGATCAATACTCTGTGAGTTACCATaGAGACAGCAGGGTTTACCA | + |
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Preference number: 4 (lower is better) Translates to: VSQENQIQFQRAVSQRSILCELP*RQQGLP Trigger: TGGTAAACCCTGCTGTCTCCATGGTAACTCACAGAG...TATTGATCTTTGGGAGACAGCCCTCTGAAACTGGATTTGATTCTCTTGTGAGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111873.8 |
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| 3UTR CAA 72 bp | TGGCCTAGAGAGGCATCTGTCTGTATTTCCACTTCTTaGATCATCCTCTGCTACATAGTTAAGTTTGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: WPREASVCISTS*IILCYIVKFEG Trigger: GCCCTCAAACTTAACTATGTAGCAGAGGATGATCAAAGAAGTGGAAATACAGACAGATGCCTCTCTAGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
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| CDS-3UTR TCA 90 bp | GTCTCACAAGAGAATCAAATCCAGTTTCAGAGGGCTGTCTCCCAAAGATCAATATCAGAGACTTCTCAGTaGGGAGAAGAGTTTCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: VSQENQIQFQRAVSQRSISETSQ*GEEFLH Trigger: GTGAAGAAACTCTTCTCCTCACTGAGAAGTCTCTGA...TATTGATCTTTGGGAGACAGCCCTCTGAAACTGGATTTGATTCTCTTGTGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111873.8 |
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| CDS-3UTR CCA 90 bp | ATAGTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATTCCGGTTGGAATTCATaGTCTGAAGATAATATCCTG | + |
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Preference number: 4 (lower is better) Translates to: IVKFEGSLGSMRSCPKPDSGWNS*SEDNIL Trigger: CAGGATATTATCTTCAGACCATGAATTCCAACCGGA...ATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAACTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
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| CDS-3UTR TCA 90 bp | CTCTTCTTTATGTTGACTTTCCCAGTGAAACGTATGAAGTATTCGATTGAAGAAGTCAGCAGTGCTACATaGAACAACCCAGCCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: LFFMLTFPVKRMKYSIEEVSSAT*NNPACS Trigger: GGAACAGGCTGGGTTGTTTCATGTAGCACTGCTGAC...TTCTTCAATCGAATACTTCATACGTTTCACTGGGAAAGTCAACATAAAGAAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS-3UTR GCA 90 bp | CTCTTCTTTATGTTGACTTTCCCAGTGAAACGTATGAAGTATTCGATTGAAGAATTGCCTGAAGGAGACTaGTCCCGGGCAAGTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LFFMLTFPVKRMKYSIEELPEGD*SRASFL Trigger: CAGAAAACTTGCCCGGGAGCAGTCTCCTTCAGGCAA...TTCTTCAATCGAATACTTCATACGTTTCACTGGGAAAGTCAACATAAAGAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
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| CDS-3UTR GCA 90 bp | GTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATAAGAGAAGTTCTCTAGATTaGCTTTGTCTAATGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKFEGSLGSMRSCPKPDKRSSLD*LCLMCL Trigger: CAAACACATTAGACAAAGGCAATCTAGAGAACTTCT...CTTATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
||
| CDS-3UTR TCA 90 bp | CTCTTCTTTATGTTGACTTTCCCAGTGAAACGTATGAAGTATTCGATTGAAGAACACAGGGGTAAGGACTaGGGTTCCAATAAAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LFFMLTFPVKRMKYSIEEHRGKD*GSNKAQ Trigger: TTGGGCTTTATTGGAACCTCAGTCCTTACCCCTGTG...TTCTTCAATCGAATACTTCATACGTTTCACTGGGAAAGTCAACATAAAGAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTTTATGTTGACTTTCCCAGTGAAACGTATGAAGTATTCGATTGAAGAAGCAGAGAGTCAGCAGTaGTACATGAAACAACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFFMLTFPVKRMKYSIEEAESQQ*YMKQPS Trigger: GCTGGGTTGTTTCATGTAGCACTGCTGACTCTCTGC...TTCTTCAATCGAATACTTCATACGTTTCACTGGGAAAGTCAACATAAAGAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
||
| CDS-3UTR CCA 90 bp | GTCTCACAAGAGAATCAAATCCAGTTTCAGAGGGCTGTCTCCCAAAGATCAATATCCGGTTGGAATTCATaGTCTGAAGATAATATCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSQENQIQFQRAVSQRSISGWNS*SEDNIL Trigger: CAGGATATTATCTTCAGACCATGAATTCCAACCGGA...TATTGATCTTTGGGAGACAGCCCTCTGAAACTGGATTTGATTCTCTTGTGAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111873.8 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTTTATGTTGACTTTCCCAGTGAAACGTATGAAGTATTCGATTGAAGAAGAGCAGCATCAAGGATaGCAGCACGAAGAAGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LFFMLTFPVKRMKYSIEEEQHQG*QHEEEV Trigger: AACTTCTTCTTCGTGCTGGCATCCTTGATGCTGCTC...TTCTTCAATCGAATACTTCATACGTTTCACTGGGAAAGTCAACATAAAGAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTTTATGTTGACTTTCCCAGTGAAACGTATGAAGTATTCGATTGAAGAACTCTGTGAGTTACCATaGAGACAGCAGGGTTTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LFFMLTFPVKRMKYSIEELCELP*RQQGLP Trigger: TGGTAAACCCTGCTGTCTCCATGGTAACTCACAGAG...TTCTTCAATCGAATACTTCATACGTTTCACTGGGAAAGTCAACATAAAGAAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
||
| CDS-3UTR CCA 90 bp | CTCTTCTTTATGTTGACTTTCCCAGTGAAACGTATGAAGTATTCGATTGAAGAACACCTTGTTTTTCCATaGCATGGTCTAACCAACTCG | + |
|
Preference number: 4 (lower is better) Translates to: LFFMLTFPVKRMKYSIEEHLVFP*HGLTNS Trigger: CGAGTTGGTTAGACCATGCCATGGAAAAACAAGGTG...TTCTTCAATCGAATACTTCATACGTTTCACTGGGAAAGTCAACATAAAGAAGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
||
| CDS-3UTR TCA 90 bp | CTCTTCTTTATGTTGACTTTCCCAGTGAAACGTATGAAGTATTCGATTGAAGAACCAAAGATCAATACTTaGAGATGCTCCCTGTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: LFFMLTFPVKRMKYSIEEPKINT*RCSLCT Trigger: AGTACACAGGGAGCATCTTCAAGTATTGATCTTTGG...TTCTTCAATCGAATACTTCATACGTTTCACTGGGAAAGTCAACATAAAGAAGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
||
| CDS-3UTR GCA 90 bp | CTCTTCTTTATGTTGACTTTCCCAGTGAAACGTATGAAGTATTCGATTGAAGAAAGAAGTTCTCTAGATTaGCTTTGTCTAATGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LFFMLTFPVKRMKYSIEERSSLD*LCLMCL Trigger: CAAACACATTAGACAAAGGCAATCTAGAGAACTTCT...TTCTTCAATCGAATACTTCATACGTTTCACTGGGAAAGTCAACATAAAGAAGAG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
||
| CDS GCA 90 bp | TGCCACACATATCTGGCGGACAGACGACAGCCCTTATTCCTCCTGTaGCCAGGCAGAGAGTCAGCAGTGCTACATGAAACAACCCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: CHTYLADRRQPLFLL*PGRESAVLHETTQP Trigger: AGGCTGGGTTGTTTCATGTAGCACTGCTGACTCTCTGCCTGGGCACAGGAGGAATAAGGGCTGTCGTCTGTCCGCCAGATATGTGTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
||
| CDS CCA 90 bp | TTTTCCATGGCATGGTCTAACCAACTCGATCCATCTCGCCCAAAGTaGCAGTATGGCAGGCAGCGTGTTTTCAGGGCCCTAACAAACGCC | + |
|
Preference number: 5 (lower is better) Translates to: FSMAWSNQLDPSRPK*QYGRQRVFRALTNA Trigger: GGCGTTTGTTAGGGCCCTGAAAACACGCTGCCTGCCATACTGCCACTTTGGGCGAGATGGATCGAGTTGGTTAGACCATGCCATGGAAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
||
| CDS-3UTR CAA 90 bp | GTGAGATCTCCCCATCTCTCAGGAGTCCGAGCTGTGATTCTGCCTCTCAGACACTCTTGTGTCTTCCTCTaGGAGTTCACTGTGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VRSPHLSGVRAVILPLRHSCVFL*EFTVVS Trigger: GGACACCACAGTGAACTCCAAGAGGAAGACACAAGA...GTGTCTGAGAGGCAGAATCACAGCTCGGACTCCTGAGAGATGGGGAGATCTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141280.3 |
||
| CDS TCA 90 bp | TTTCCACGGATGCGCTCCATGAAGCCCTCCAGAGTCCCAGGATGTTaGGCAGCATCAAGGATGCCAGCACGAAGAAGAAGTTCTCTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: FPRMRSMKPSRVPGC*AASRMPARRRSSLD Trigger: ATCTAGAGAACTTCTTCTTCGTGCTGGCATCCTTGATGCTGCTCAACATCCTGGGACTCTGGAGGGCTTCATGGAGCGCATCCGTGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111873.8 |
||
| CDS TCA 90 bp | GAAGTACTCATCCGCAAGCCATCCCATGAACACAGGGGTAAGGACTaGGGTTCCAATAAAGCCCAAGTTGAGCATGGCTGCCTGGTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: EVLIRKPSHEHRGKD*GSNKAQVEHGCLVV Trigger: AACCACCAGGCAGCCATGCTCAACTTGGGCTTTATTGGAACCTCAGTCCTTACCCCTGTGTTCATGGGATGGCTTGCGGATGAGTACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
||
| CDS TCA 90 bp | GCCCTTATTCCTCCTGTGCCCAGGCAGAGAGTCAGCAGTGCTACATaGAACAACCCAGCCTGTTCCTCCACAGACGTGTTGTTAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: ALIPPVPRQRVSSAT*NNPACSSTDVLLNT Trigger: TGTGTTTAACAACACGTCTGTGGAGGAACAGGCTGGGTTGTTTCATGTAGCACTGCTGACTCTCTGCCTGGGCACAGGAGGAATAAGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
||
| CDS CCA 90 bp | ATACTCCAAGCAGCACATACTGTGGAACCAGACAGACACAGGCCATaGAGGAAACAGAGAAAAGTTTGCCTGAAGGAGACTGCTCCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: ILQAAHTVEPDRHRP*RKQRKVCLKETAPG Trigger: CCCGGGAGCAGTCTCCTTCAGGCAAACTTTTCTCTGTTTCCTCCATGGCCTGTGTCTGTCTGGTTCCACAGTATGTGCTGCTTGGAGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111873.8 ENSMUST00000150278.3 ENSMUST00000171804.4 |
||
| CDS-3UTR CAA 90 bp | GTGAGATCTCCCCATCTCTCAGGAGTCCGAGCTGTGATTCTGCCTCTCAGACACGGGCAGAGATGTTTCTaGTGTCTTCCTCTTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VRSPHLSGVRAVILPLRHGQRCF*CLPLGV Trigger: AACTCCAAGAGGAAGACACAAGAAACATCTCTGCCC...GTGTCTGAGAGGCAGAATCACAGCTCGGACTCCTGAGAGATGGGGAGATCTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141280.3 |
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| CDS TCA 90 bp | GAGGCCCAGTTACAAAATGGCATTGGCTTCTTTGATTCCCGTTCCTaGCTGCCACACATATCTGGCGGACAGACGACAGCCCTTATTCCT | + |
|
Preference number: 5 (lower is better) Translates to: EAQLQNGIGFFDSRS*LPHISGGQTTALIP Trigger: AGGAATAAGGGCTGTCGTCTGTCCGCCAGATATGTGTGGCAGTCAGGAACGGGAATCAAAGAAGCCAATGCCATTTTGTAACTGGGCCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
||
| CDS GCA 90 bp | CCCAGTTACAAAATGGCATTGGCTTCTTTGATTCCCGTTCCTGACTaGCACACATATCTGGCGGACAGACGACAGCCCTTATTCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSYKMALASLIPVPD*HTYLADRRQPLFLL Trigger: CAGGAGGAATAAGGGCTGTCGTCTGTCCGCCAGATATGTGTGGCAGTCAGGAACGGGAATCAAAGAAGCCAATGCCATTTTGTAACTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS-3UTR CAA 90 bp | TTAGGTGAGATCTCCCCATCTCTCAGGAGTCCGAGCTGTGATTCTGCCTCTCAGAGCCACGCACTTGGATaGAATGTGACAGTTCTCATG | + |
|
Preference number: 5 (lower is better) Translates to: LGEISPSLRSPSCDSASQSHALG*NVTVLM Trigger: CATGAGAACTGTCACATTCAATCCAAGTGCGTGGCT...CTGAGAGGCAGAATCACAGCTCGGACTCCTGAGAGATGGGGAGATCTCACCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141280.3 |
||
| CDS TCA 90 bp | TCCCTGTGCAAAAGGGGATCATGTTGCAGACGACTTCGAAGAAAGTaGACCTCTCACACAGCTCCACCAGAAGCAAGCAGATTCCAACTC | + |
|
Preference number: 5 (lower is better) Translates to: SLCKRGSCCRRLRRK*TSHTAPPEASRFQL Trigger: GAGTTGGAATCTGCTTGCTTCTGGTGGAGCTGTGTGAGAGGTTCACTTTCTTCGAAGTCGTCTGCAACATGATCCCCTTTTGCACAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS CCA 90 bp | GCGCAATCGGCAGAGAAAATCCACCCCAGTTCCGGTTGGAATTCATaGTCTGAAGATAATATCCTGAAGGAATCTGCAGGAGGCACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AQSAEKIHPSSGWNS*SEDNILKESAGGTF Trigger: GAACGTGCCTCCTGCAGATTCCTTCAGGATATTATCTTCAGACCATGAATTCCAACCGGAACTGGGGTGGATTTTCTCTGCCGATTGCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111873.8 ENSMUST00000141280.3 ENSMUST00000171804.4 |
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| CDS-3UTR CAA 90 bp | CATGTTTATATACTCTCAAAGTCCATGAACCACATCTGGGTGGGCGCATTTGTGCTAGGAAGCCAGCCATaGCCACAGAGGATGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: HVYILSKSMNHIWVGAFVLGSQP*PQRMLH Trigger: GTGCAGCATCCTCTGTGGCAATGGCTGGCTTCCTAG...CACAAATGCGCCCACCCAGATGTGGTTCATGGACTTTGAGAGTATATAAACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150278.3 |
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| CDS-3UTR CAA 90 bp | TGGCCTAGAGAGGCATCTGTCTGTATTTCCACTTCTTTGATCATCCTCTGCTACCAGAGTCCCAGGATGTaGAGCAGCATCAAGGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: WPREASVCISTSLIILCYQSPRM*SSIKDA Trigger: GGCATCCTTGATGCTGCTCAACATCCTGGGACTCTG...GTAGCAGAGGATGATCAAAGAAGTGGAAATACAGACAGATGCCTCTCTAGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
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| CDS-3UTR CAA 90 bp | ATAGTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATCCAATAAAGCCCAAGTaGAGCATGGCTGCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: IVKFEGSLGSMRSCPKPDPIKPK*SMAAWW Trigger: CCACCAGGCAGCCATGCTCAACTTGGGCTTTATTGG...ATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS TCA 90 bp | CTGAAGGAATCTGCAGGAGGCACGTTCTGTACAGGATCTGGAAGCTaGAGAGAGGCAAAAGGGCAGAGATGTTTCTTGTGTCTTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LKESAGGTFCTGSGS*REAKGQRCFLCLPL Trigger: AAGAGGAAGACACAAGAAACATCTCTGCCCTTTTGCCTCTCTTCAGCTTCCAGATCCTGTACAGAACGTGCCTCCTGCAGATTCCTTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141280.3 ENSMUST00000171804.4 |
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| CDS TCA 90 bp | TCCACCCCAGTTCCGGTTGGAATTCATGGTCTGAAGATAATATCCTaGAGGAATCTGCAGGAGGCACGTTCTGTACAGGATCTGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: STPVPVGIHGLKIIS*RNLQEARSVQDLEA Trigger: AGCTTCCAGATCCTGTACAGAACGTGCCTCCTGCAGATTCCTTCAGGATATTATCTTCAGACCATGAATTCCAACCGGAACTGGGGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141280.3 ENSMUST00000171804.4 |
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| CDS GCA 90 bp | ACACAGGCCATGGAGGAAACAGAGAAAAGTTTGCCTGAAGGAGACTaGTCCCGGGCAAGTTTTCTGTATATTTCTAGGAAGCCAGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: TQAMEETEKSLPEGD*SRASFLYISRKPAI Trigger: AATGGCTGGCTTCCTAGAAATATACAGAAAACTTGCCCGGGAGCAGTCTCCTTCAGGCAAACTTTTCTCTGTTTCCTCCATGGCCTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111873.8 ENSMUST00000150278.3 ENSMUST00000171804.4 |
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| CDS GCA 90 bp | GTGGAACCAGACAGACACAGGCCATGGAGGAAACAGAGAAAAGTTTaGCTGAAGGAGACTGCTCCCGGGCAAGTTTTCTGTATATTTCTA | + |
|
Preference number: 5 (lower is better) Translates to: VEPDRHRPWRKQRKV*LKETAPGQVFCIFL Trigger: TAGAAATATACAGAAAACTTGCCCGGGAGCAGTCTCCTTCAGGCAAACTTTTCTCTGTTTCCTCCATGGCCTGTGTCTGTCTGGTTCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111873.8 ENSMUST00000150278.3 ENSMUST00000171804.4 |
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| CDS CCA 90 bp | AGCAGGGTTTACCAGGACTTCAGATACTCCAAGCAGCACATACTGTaGAACCAGACAGACACAGGCCATGGAGGAAACAGAGAAAAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SRVYQDFRYSKQHIL*NQTDTGHGGNREKF Trigger: AAACTTTTCTCTGTTTCCTCCATGGCCTGTGTCTGTCTGGTTCCACAGTATGTGCTGCTTGGAGTATCTGAAGTCCTGGTAAACCCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111873.8 ENSMUST00000150278.3 ENSMUST00000171804.4 |
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| CDS-3UTR CAA 90 bp | GTCTGTATTTCCACTTCTTTGATCATCCTCTGCTACATAGTTAAGTTTGAGGGCCTAGGAAGCCAGCCATaGCCACAGAGGATGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VCISTSLIILCYIVKFEGLGSQP*PQRMLH Trigger: GTGCAGCATCCTCTGTGGCAATGGCTGGCTTCCTAG...GCCCTCAAACTTAACTATGTAGCAGAGGATGATCAAAGAAGTGGAAATACAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
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| CDS-3UTR CAA 90 bp | GTCTCACAAGAGAATCAAATCCAGTTTCAGAGGGCTGTCTCCCAAAGATCAATACAGAGTCCCAGGATGTaGAGCAGCATCAAGGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: VSQENQIQFQRAVSQRSIQSPRM*SSIKDA Trigger: GGCATCCTTGATGCTGCTCAACATCCTGGGACTCTG...TATTGATCTTTGGGAGACAGCCCTCTGAAACTGGATTTGATTCTCTTGTGAGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111873.8 |
||
| CDS-3UTR CAA 90 bp | TGGCCTAGAGAGGCATCTGTCTGTATTTCCACTTCTTTGATCATCCTCTGCTACGGGCAGAGATGTTTCTaGTGTCTTCCTCTTGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: WPREASVCISTSLIILCYGQRCF*CLPLGV Trigger: AACTCCAAGAGGAAGACACAAGAAACATCTCTGCCC...GTAGCAGAGGATGATCAAAGAAGTGGAAATACAGACAGATGCCTCTCTAGGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS-3UTR CAA 90 bp | GTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATAAGCCCAAAGATCAATACTaGAAGATGCTCCCTGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: VKFEGSLGSMRSCPKPDKPKDQY*KMLPVY Trigger: GTACACAGGGAGCATCTTCAAGTATTGATCTTTGGG...CTTATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS TCA 90 bp | TTAGATTACAATATCTCCATGAAGCCCTCCAGAGTCCCAGGATGTTaGGCAGCATCAAGGATGCCAGCACGAAGAAGAAGTTCTCTAGAT | + |
|
Preference number: 5 (lower is better) Translates to: LDYNISMKPSRVPGC*AASRMPARRRSSLD Trigger: ATCTAGAGAACTTCTTCTTCGTGCTGGCATCCTTGATGCTGCTCAACATCCTGGGACTCTGGAGGGCTTCATGGAGATATTGTAATCTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS-3UTR CAA 90 bp | ATAGTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATCAAAAGGGGATCATGTaGCAGACGACTTCGAAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: IVKFEGSLGSMRSCPKPDQKGIM*QTTSKK Trigger: TTTCTTCGAAGTCGTCTGCAACATGATCCCCTTTTG...ATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAACTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
||
| CDS TCA 90 bp | AGAGTTTCTTCACAACGATTTCCACGGATGCGCTGGGCATTAAAATaGTTTAGATTACAATATCTCCATGAAGCCCTCCAGAGTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RVSSQRFPRMRWALK*FRLQYLHEALQSPR Trigger: CCTGGGACTCTGGAGGGCTTCATGGAGATATTGTAATCTAAATCATTTTAATGCCCAGCGCATCCGTGGAAATCGTTGTGAAGAAACTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
||
| CDS-3UTR CAA 90 bp | CTCTTCTTTATGTTGACTTTCCCAGTGAAACGTATGAAGTATTCGATTGAAGAACTAGGAAGCCAGCCATaGCCACAGAGGATGCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: LFFMLTFPVKRMKYSIEELGSQP*PQRMLH Trigger: GTGCAGCATCCTCTGTGGCAATGGCTGGCTTCCTAG...TTCTTCAATCGAATACTTCATACGTTTCACTGGGAAAGTCAACATAAAGAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
||
| CDS-3UTR CAA 90 bp | TGGCCTAGAGAGGCATCTGTCTGTATTTCCACTTCTTTGATCATCCTCTGCTACCTTTGTCTAATGTGTTaGGAAACCAATTGCCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: WPREASVCISTSLIILCYLCLMC*ETNCLP Trigger: CGGAAGGCAATTGGTTTCCAAACACATTAGACAAAG...GTAGCAGAGGATGATCAAAGAAGTGGAAATACAGACAGATGCCTCTCTAGGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
||
| CDS-3UTR CAA 90 bp | ATAGTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATCTTTGTCTAATGTGTTaGGAAACCAATTGCCTTCCG | + |
|
Preference number: 5 (lower is better) Translates to: IVKFEGSLGSMRSCPKPDLCLMC*ETNCLP Trigger: CGGAAGGCAATTGGTTTCCAAACACATTAGACAAAG...ATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
||
| CDS-3UTR CAA 90 bp | ATAGTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATGCTATGTACATCAGTTaGTTCCTTCCGAAGTACTCA | + |
|
Preference number: 5 (lower is better) Translates to: IVKFEGSLGSMRSCPKPDAMYIS*FLPKYS Trigger: TGAGTACTTCGGAAGGAACAAACTGATGTACATAGC...ATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAACTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
||
| CDS-3UTR CAA 90 bp | GTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATAAGAGTTACAAAATGGCATaGGCTTCTTTGATTCCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: VKFEGSLGSMRSCPKPDKSYKMA*ASLIPV Trigger: AACGGGAATCAAAGAAGCCAATGCCATTTTGTAACT...CTTATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
||
| CDS-3UTR CAA 90 bp | TGGCCTAGAGAGGCATCTGTCTGTATTTCCACTTCTTTGATCATCCTCTGCTACTTCTCTAGATTGCCTTaGTCTAATGTGTTTGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: WPREASVCISTSLIILCYFSRLP*SNVFGN Trigger: GTTTCCAAACACATTAGACAAAGGCAATCTAGAGAA...GTAGCAGAGGATGATCAAAGAAGTGGAAATACAGACAGATGCCTCTCTAGGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
||
| CDS-3UTR CAA 90 bp | ATAGTTAAGTTTGAGGGCAGCCTGGGCTCTATGAGATCTTGTCCCAAACCTGATTTCTCTAGATTGCCTTaGTCTAATGTGTTTGGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IVKFEGSLGSMRSCPKPDFSRLP*SNVFGN Trigger: GTTTCCAAACACATTAGACAAAGGCAATCTAGAGAA...ATCAGGTTTGGGACAAGATCTCATAGAGCCCAGGCTGCCCTCAAACTTAACTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
||
| CDS-3UTR CAA 90 bp | CTCTTCTTTATGTTGACTTTCCCAGTGAAACGTATGAAGTATTCGATTGAAGAATCTTGTGTCTTCCTCTaGGAGTTCACTGTGGTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFFMLTFPVKRMKYSIEESCVFL*EFTVVS Trigger: GGACACCACAGTGAACTCCAAGAGGAAGACACAAGA...TTCTTCAATCGAATACTTCATACGTTTCACTGGGAAAGTCAACATAAAGAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS TCA 72 bp | GGTCGCAGTGCTTCAGGTAAAGAGTCACCAGGGCGGTaGACACGGACAGAGAAGGAAGCAGGATGCCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: GRSASGKESPGR*TRTEKEAGCQG Trigger: CCCTTGGCATCCTGCTTCCTTCTCTGTCCGTGTTCACCGCCCTGGTGACTCTTTACCTGAAGCACTGCGACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS TCA 72 bp | CCTCCTGTGCCCAGGCAGAGAGTCAGCAGTGCTACATaGAACAACCCAGCCTGTTCCTCCACAGACGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PPVPRQRVSSAT*NNPACSSTDVL Trigger: CAACACGTCTGTGGAGGAACAGGCTGGGTTGTTTCATGTAGCACTGCTGACTCTCTGCCTGGGCACAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS TCA 72 bp | GATGCCAAGGGCCCCGGACCCCAAGGGCTGGATGCTTaGGATTCCCAGAAAGACAACAGCTGCATTCAGGTT | + |
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Preference number: 6 (lower is better) Translates to: DAKGPGPQGLDA*DSQKDNSCIQV Trigger: AACCTGAATGCAGCTGTTGTCTTTCTGGGAATCTCAAGCATCCAGCCCTTGGGGTCCGGGGCCCTTGGCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS CCA 72 bp | GCATGGTCTAACCAACTCGATCCATCTCGCCCAAAGTaGCAGTATGGCAGGCAGCGTGTTTTCAGGGCCCTA | + |
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Preference number: 6 (lower is better) Translates to: AWSNQLDPSRPK*QYGRQRVFRAL Trigger: TAGGGCCCTGAAAACACGCTGCCTGCCATACTGCCACTTTGGGCGAGATGGATCGAGTTGGTTAGACCATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS TCA 72 bp | ATGCGCTCCATGAAGCCCTCCAGAGTCCCAGGATGTTaGGCAGCATCAAGGATGCCAGCACGAAGAAGAAGT | + |
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Preference number: 6 (lower is better) Translates to: MRSMKPSRVPGC*AASRMPARRRS Trigger: ACTTCTTCTTCGTGCTGGCATCCTTGATGCTGCTCAACATCCTGGGACTCTGGAGGGCTTCATGGAGCGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111873.8 |
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| CDS GCA 72 bp | CCTTATTCCTCCTGTGCCCAGGCAGAGAGTCAGCAGTaGTACATGAAACAACCCAGCCTGTTCCTCCACAGA | + |
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Preference number: 6 (lower is better) Translates to: PYSSCAQAESQQ*YMKQPSLFLHR Trigger: TCTGTGGAGGAACAGGCTGGGTTGTTTCATGTAGCACTGCTGACTCTCTGCCTGGGCACAGGAGGAATAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS GCA 72 bp | TATCTGGCGGACAGACGACAGCCCTTATTCCTCCTGTaGCCAGGCAGAGAGTCAGCAGTGCTACATGAAACA | + |
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Preference number: 6 (lower is better) Translates to: YLADRRQPLFLL*PGRESAVLHET Trigger: TGTTTCATGTAGCACTGCTGACTCTCTGCCTGGGCACAGGAGGAATAAGGGCTGTCGTCTGTCCGCCAGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS CAA 72 bp | GGTTCGCGGACCAGGAGGCCCAGTTACAAAATGGCATaGGCTTCTTTGATTCCCGTTCCTGACTGCCACACA | + |
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Preference number: 6 (lower is better) Translates to: GSRTRRPSYKMA*ASLIPVPDCHT Trigger: TGTGTGGCAGTCAGGAACGGGAATCAAAGAAGCCAATGCCATTTTGTAACTGGGCCTCCTGGTCCGCGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS CAA 90 bp | CTGCATTCAGGTTCGCGGACCAGGAGGCCCAGTTACAAAATGGCATaGGCTTCTTTGATTCCCGTTCCTGACTGCCACACATATCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: LHSGSRTRRPSYKMA*ASLIPVPDCHTYLA Trigger: CGCCAGATATGTGTGGCAGTCAGGAACGGGAATCAAAGAAGCCAATGCCATTTTGTAACTGGGCCTCCTGGTCCGCGAACCTGAATGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS TCA 72 bp | ATCCGCAAGCCATCCCATGAACACAGGGGTAAGGACTaGGGTTCCAATAAAGCCCAAGTTGAGCATGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: IRKPSHEHRGKD*GSNKAQVEHGC Trigger: GCAGCCATGCTCAACTTGGGCTTTATTGGAACCTCAGTCCTTACCCCTGTGTTCATGGGATGGCTTGCGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS GCA 72 bp | GACAGACACAGGCCATGGAGGAAACAGAGAAAAGTTTaGCTGAAGGAGACTGCTCCCGGGCAAGTTTTCTGT | + |
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Preference number: 6 (lower is better) Translates to: DRHRPWRKQRKV*LKETAPGQVFC Trigger: ACAGAAAACTTGCCCGGGAGCAGTCTCCTTCAGGCAAACTTTTCTCTGTTTCCTCCATGGCCTGTGTCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111873.8 ENSMUST00000150278.3 ENSMUST00000171804.4 |
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| CDS CAA 72 bp | AGACAGACACAGGCCATGGAGGAAACAGAGAAAAGTTaGCCTGAAGGAGACTGCTCCCGGGCAAGTTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: RQTQAMEETEKS*PEGDCSRASFL Trigger: CAGAAAACTTGCCCGGGAGCAGTCTCCTTCAGGCAAACTTTTCTCTGTTTCCTCCATGGCCTGTGTCTGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111873.8 ENSMUST00000150278.3 ENSMUST00000171804.4 |
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| CDS CAA 72 bp | CAATATCTCCATGAAGCCCTCCAGAGTCCCAGGATGTaGAGCAGCATCAAGGATGCCAGCACGAAGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: QYLHEALQSPRM*SSIKDASTKKK Trigger: CTTCTTCTTCGTGCTGGCATCCTTGATGCTGCTCAACATCCTGGGACTCTGGAGGGCTTCATGGAGATATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS TCA 72 bp | TCTGCAGGAGGCACGTTCTGTACAGGATCTGGAAGCTaGAGAGAGGCAAAAGGGCAGAGATGTTTCTTGTGT | + |
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Preference number: 6 (lower is better) Translates to: SAGGTFCTGSGS*REAKGQRCFLC Trigger: ACACAAGAAACATCTCTGCCCTTTTGCCTCTCTTCAGCTTCCAGATCCTGTACAGAACGTGCCTCCTGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141280.3 ENSMUST00000171804.4 |
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| CDS TCA 72 bp | TTACAAAATGGCATTGGCTTCTTTGATTCCCGTTCCTaGCTGCCACACATATCTGGCGGACAGACGACAGCC | + |
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Preference number: 6 (lower is better) Translates to: LQNGIGFFDSRS*LPHISGGQTTA Trigger: GGCTGTCGTCTGTCCGCCAGATATGTGTGGCAGTCAGGAACGGGAATCAAAGAAGCCAATGCCATTTTGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS GCA 72 bp | AAAATGGCATTGGCTTCTTTGATTCCCGTTCCTGACTaGCACACATATCTGGCGGACAGACGACAGCCCTTA | + |
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Preference number: 6 (lower is better) Translates to: KMALASLIPVPD*HTYLADRRQPL Trigger: TAAGGGCTGTCGTCTGTCCGCCAGATATGTGTGGCAGTCAGGAACGGGAATCAAAGAAGCCAATGCCATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS CCA 72 bp | GAAGGAATCTGCAGGAGGCACGTTCTGTACAGGATCTaGAAGCTGAAGAGAGGCAAAAGGGCAGAGATGTTT | + |
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Preference number: 6 (lower is better) Translates to: EGICRRHVLYRI*KLKRGKRAEMF Trigger: AAACATCTCTGCCCTTTTGCCTCTCTTCAGCTTCCAGATCCTGTACAGAACGTGCCTCCTGCAGATTCCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000141280.3 ENSMUST00000171804.4 |
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| CDS CCA 72 bp | AGTTCACTGTGGTGTCCACCTTGTTTTTCCATGGCATaGTCTAACCAACTCGATCCATCTCGCCCAAAGTGG | + |
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Preference number: 6 (lower is better) Translates to: SSLWCPPCFSMA*SNQLDPSRPKW Trigger: CCACTTTGGGCGAGATGGATCGAGTTGGTTAGACCATGCCATGGAAAAACAAGGTGGACACCACAGTGAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS CAA 90 bp | ACTGCTCCCGGGCAAGTTTTCTGTATATTTCTAGGAAGCCAGCCATaGCCACAGAGGATGCTGCACAAATGTTACCAGCAATCATGCACG | + |
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Preference number: 6 (lower is better) Translates to: TAPGQVFCIFLGSQP*PQRMLHKCYQQSCT Trigger: CGTGCATGATTGCTGGTAACATTTGTGCAGCATCCTCTGTGGCAATGGCTGGCTTCCTAGAAATATACAGAAAACTTGCCCGGGAGCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000111873.8 ENSMUST00000150278.3 ENSMUST00000171804.4 |
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| CDS CAA 90 bp | GCTGAAGAGAGGCAAAAGGGCAGAGATGTTTCTTGTGTCTTCCTCTaGGAGTTCACTGTGGTGTCCACCTTGTTTTTCCATGGCATGGTC | + |
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Preference number: 6 (lower is better) Translates to: AEERQKGRDVSCVFL*EFTVVSTLFFHGMV Trigger: GACCATGCCATGGAAAAACAAGGTGGACACCACAGTGAACTCCAAGAGGAAGACACAAGAAACATCTCTGCCCTTTTGCCTCTCTTCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS CAA 90 bp | TGTGGAACCAGACAGACACAGGCCATGGAGGAAACAGAGAAAAGTTaGCCTGAAGGAGACTGCTCCCGGGCAAGTTTTCTGTATATTTCT | + |
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Preference number: 6 (lower is better) Translates to: CGTRQTQAMEETEKS*PEGDCSRASFLYIS Trigger: AGAAATATACAGAAAACTTGCCCGGGAGCAGTCTCCTTCAGGCAAACTTTTCTCTGTTTCCTCCATGGCCTGTGTCTGTCTGGTTCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111873.8 ENSMUST00000150278.3 ENSMUST00000171804.4 |
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| CDS TCA 72 bp | GTTCCGGTTGGAATTCATGGTCTGAAGATAATATCCTaGAGGAATCTGCAGGAGGCACGTTCTGTACAGGAT | + |
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Preference number: 6 (lower is better) Translates to: VPVGIHGLKIIS*RNLQEARSVQD Trigger: ATCCTGTACAGAACGTGCCTCCTGCAGATTCCTTCAGGATATTATCTTCAGACCATGAATTCCAACCGGAAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000111873.8 ENSMUST00000141280.3 ENSMUST00000171804.4 |
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| CDS CCA 72 bp | GCAGAGAAAATCCACCCCAGTTCCGGTTGGAATTCATaGTCTGAAGATAATATCCTGAAGGAATCTGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: AEKIHPSSGWNS*SEDNILKESAG Trigger: TCCTGCAGATTCCTTCAGGATATTATCTTCAGACCATGAATTCCAACCGGAACTGGGGTGGATTTTCTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111873.8 ENSMUST00000141280.3 ENSMUST00000171804.4 |
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| CDS CCA 72 bp | GAGATGTTTCTTGTGTCTTCCTCTTGGAGTTCACTGTaGTGTCCACCTTGTTTTTCCATGGCATGGTCTAAC | + |
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Preference number: 6 (lower is better) Translates to: EMFLVSSSWSSL*CPPCFSMAWSN Trigger: GTTAGACCATGCCATGGAAAAACAAGGTGGACACCACAGTGAACTCCAAGAGGAAGACACAAGAAACATCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS CAA 72 bp | CCTAGGAAATGTAGAGATAAGGCTATGTACATCAGTTaGTTCCTTCCGAAGTACTCATCCGCAAGCCATCCC | + |
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Preference number: 6 (lower is better) Translates to: PRKCRDKAMYIS*FLPKYSSASHP Trigger: GGGATGGCTTGCGGATGAGTACTTCGGAAGGAACAAACTGATGTACATAGCCTTATCTCTACATTTCCTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS CAA 72 bp | AGGCAAAAGGGCAGAGATGTTTCTTGTGTCTTCCTCTaGGAGTTCACTGTGGTGTCCACCTTGTTTTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: RQKGRDVSCVFL*EFTVVSTLFFH Trigger: ATGGAAAAACAAGGTGGACACCACAGTGAACTCCAAGAGGAAGACACAAGAAACATCTCTGCCCTTTTGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS CAA 90 bp | TTGAGCAGCATCAAGGATGCCAGCACGAAGAAGAAGTTCTCTAGATaGCCTTTGTCTAATGTGTTTGGAAACCAATTGCCTTCCGAGATG | + |
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Preference number: 6 (lower is better) Translates to: LSSIKDASTKKKFSR*PLSNVFGNQLPSEM Trigger: CATCTCGGAAGGCAATTGGTTTCCAAACACATTAGACAAAGGCAATCTAGAGAACTTCTTCTTCGTGCTGGCATCCTTGATGCTGCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
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| CDS GCA 72 bp | ATGGAGGAAACAGAGAAAAGTTTGCCTGAAGGAGACTaGTCCCGGGCAAGTTTTCTGTATATTTCTAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: MEETEKSLPEGD*SRASFLYISRK Trigger: CTTCCTAGAAATATACAGAAAACTTGCCCGGGAGCAGTCTCCTTCAGGCAAACTTTTCTCTGTTTCCTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000111873.8 ENSMUST00000150278.3 ENSMUST00000171804.4 |
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| CDS CAA 72 bp | GATGCCAGCACGAAGAAGAAGTTCTCTAGATTGCCTTaGTCTAATGTGTTTGGAAACCAATTGCCTTCCGAG | + |
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Preference number: 6 (lower is better) Translates to: DASTKKKFSRLP*SNVFGNQLPSE Trigger: CTCGGAAGGCAATTGGTTTCCAAACACATTAGACAAAGGCAATCTAGAGAACTTCTTCTTCGTGCTGGCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
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| CDS TCA 72 bp | TCACAACGATTTCCACGGATGCGCTGGGCATTAAAATaGTTTAGATTACAATATCTCCATGAAGCCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: SQRFPRMRWALK*FRLQYLHEALQ Trigger: CTGGAGGGCTTCATGGAGATATTGTAATCTAAATCATTTTAATGCCCAGCGCATCCGTGGAAATCGTTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171804.4 |
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| CDS CAA 72 bp | ATCAAGGATGCCAGCACGAAGAAGAAGTTCTCTAGATaGCCTTTGTCTAATGTGTTTGGAAACCAATTGCCT | + |
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Preference number: 6 (lower is better) Translates to: IKDASTKKKFSR*PLSNVFGNQLP Trigger: AGGCAATTGGTTTCCAAACACATTAGACAAAGGCAATCTAGAGAACTTCTTCTTCGTGCTGGCATCCTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111873.8 ENSMUST00000171804.4 |
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