Pregenerated sensors for SLC15A4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029416Ensembl transcript IDs: ENSMUST00000031367.15, ENSMUST00000124569.8, ENSMUST00000144603.6, ENSMUST00000152727.2, ENSMUST00000153832.8, ENSMUST00000155321.2, ENSMUST00000198486.5
Found 166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGAATAAGGATGGCAGCAGCAGAACGGTGGCTGCCCAGGAGAGCATaGCTGGCTCAGGACTGGCAGAGACCTTCAGTGAGAGAAGCCACA | + |
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Preference number: 1 (lower is better) Translates to: GIRMAAAERWLPRRA*LAQDWQRPSVREAT Trigger: TGTGGCTTCTCTCACTGAAGGTCTCTGCCAGTCCTGAGCCAGCCATGCTCTCCTGGGCAGCCACCGTTCTGCTGCTGCCATCCTTATTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR CCA 90 bp | CAGGCCATGTCTCCTCAGCACCGGGTCCACCAGCTTGTCCTTCAGTaGGATGAGCAGGAGGATGAGCACCGCATCAAACATGGTGAGCCA | + |
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Preference number: 1 (lower is better) Translates to: QAMSPQHRVHQLVLQ*DEQEDEHRIKHGEP Trigger: TGGCTCACCATGTTTGATGCGGTGCTCATCCTCCTGCTCATCCCACTGAAGGACAAGCTGGTGGACCCGGTGCTGAGGAGACATGGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
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| 3UTR CCA 90 bp | GCACATGACGAAGAACATCCCCACAGCAATCCTCTTCAGGGAGGATaGGAGCAGGCCATGTCTCCTCAGCACCGGGTCCACCAGCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: AHDEEHPHSNPLQGG*EQAMSPQHRVHQLV Trigger: GACAAGCTGGTGGACCCGGTGCTGAGGAGACATGGCCTGCTCCCATCCTCCCTGAAGAGGATTGCTGTGGGGATGTTCTTCGTCATGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
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| 3UTR TCA 90 bp | GCTCATCCACCCAATGGCCTTGAGAGACACCAGGGCCAACAGTCCTaGGCCCACAAAGGACCCAATGCCAGAGAAGAAGAAGAAGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: AHPPNGLERHQGQQS*AHKGPNAREEEEES Trigger: GGACTCTTCTTCTTCTTCTCTGGCATTGGGTCCTTTGTGGGCTCAGGACTGTTGGCCCTGGTGTCTCTCAAGGCCATTGGGTGGATGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR TCA 90 bp | CCAGCCTTTTACTCTCCAGGATTCCTGCAGCAAAGGCAGAGCACATaGCGAAGAACATCCCCACAGCAATCCTCTTCAGGGAGGATGGGA | + |
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Preference number: 1 (lower is better) Translates to: PAFYSPGFLQQRQST*RRTSPQQSSSGRMG Trigger: TCCCATCCTCCCTGAAGAGGATTGCTGTGGGGATGTTCTTCGTCATGTGCTCTGCCTTTGCTGCAGGAATCCTGGAGAGTAAAAGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
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| 3UTR TCA 90 bp | AGCCCACAAAGGACCCAATGCCAGAGAAGAAGAAGAAGAGTCCCATaGTGGCGCTCTGCATGGACTTGGGGGCAGCTGAGTATGCAAATT | + |
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Preference number: 1 (lower is better) Translates to: SPQRTQCQRRRRRVP*WRSAWTWGQLSMQI Trigger: AATTTGCATACTCAGCTGCCCCCAAGTCCATGCAGAGCGCCATCATGGGACTCTTCTTCTTCTTCTCTGGCATTGGGTCCTTTGTGGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR TCA 90 bp | CTCAGTCAACAAAACCTACTTTCTGAGCAGATGAGCCTACATGACTaGCCCACAAAGGCCTTGGCATCAGCCAGGCCTGTGACAAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: LSQQNLLSEQMSLHD*PTKALASARPVTRV Trigger: GACTCTTGTCACAGGCCTGGCTGATGCCAAGGCCTTTGTGGGTCAGTCATGTAGGCTCATCTGCTCAGAAAGTAGGTTTTGTTGACTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR CCA 90 bp | AGCACATACTGTGGGATCTGCCACCAGATGGGCAAGTCAGCAGCATaGTACACCACACCACCAATGGTCTGGTTAATGGTCTTCTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: STYCGICHQMGKSAA*YTTPPMVWLMVFSF Trigger: AAAGGAGAAGACCATTAACCAGACCATTGGTGGTGTGGTGTACCATGCTGCTGACTTGCCCATCTGGTGGCAGATCCCACAGTATGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGAACGGTGGCTGCCCAGGAGAGCATGGCTGGCTCAGGACTGGCAGAGACCCAGGAGAGCATGGCTaGCTCAGGACTGGCAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: QQNGGCPGEHGWLRTGRDPGEHG*LRTGRD Trigger: GTCTCTGCCAGTCCTGAGCCAGCCATGCTCTCCTGG...GTCTCTGCCAGTCCTGAGCCAGCCATGCTCTCCTGGGCAGCCACCGTTCTGCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGCCAATAGCCCAGCAGCTCCCATGTTTTCCCCACTCACCACCTGCCTCCGCAGCAGCAGAACGGTaGCTGCCCAGGAGAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: AGPIAQQLPCFPHSPPASAAAER*LPRRAW Trigger: CCATGCTCTCCTGGGCAGCCACCGTTCTGCTGCTGC...GGAGGCAGGTGGTGAGTGGGGAAAACATGGGAGCTGCTGGGCTATTGGCCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR CCA 90 bp | GCTGGGCCAATAGCCCAGCAGCTCCCATGTTTTCCCCACTCACCACCTGCCTCCCCAGGAGAGCATGGCTaGCTCAGGACTGGCAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: AGPIAQQLPCFPHSPPASPGEHG*LRTGRD Trigger: GTCTCTGCCAGTCCTGAGCCAGCCATGCTCTCCTGG...GGAGGCAGGTGGTGAGTGGGGAAAACATGGGAGCTGCTGGGCTATTGGCCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCTTCAGGGAGGATGGGAGCAGGCCATGTCTCCTCAGCACCGGGTCCACCAGAATCTAGCCTCAGTCTaGTTGCTGGCAGTGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: PLQGGWEQAMSPQHRVHQNLASV*LLAVPW Trigger: CCAGGGCACTGCCAGCAAGCAGACTGAGGCTAGATT...CTGGTGGACCCGGTGCTGAGGAGACATGGCCTGCTCCCATCCTCCCTGAAGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR CAA 90 bp | GAGGATGGGAGCAGGCCATGTCTCCTCAGCACCGGGTCCACCAGCTaGTCCTTCAGTGGGATGAGCAGGAGGATGAGCACCGCATCAAAC | + |
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Preference number: 2 (lower is better) Translates to: EDGSRPCLLSTGSTS*SFSGMSRRMSTASN Trigger: GTTTGATGCGGTGCTCATCCTCCTGCTCATCCCACTGAAGGACAAGCTGGTGGACCCGGTGCTGAGGAGACATGGCCTGCTCCCATCCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
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| 3UTR-3UTR TCA 90 bp | TGGGCCAATAGCCCAGCAGCTCCCATGTTTTCCCCACTCACCACCTGCCTCCATAGTCTGCAGAACCTGTaGGCATGCTGGCTGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: WANSPAAPMFSPLTTCLHSLQNL*ACWLAA Trigger: TGCAGCCAGCCAGCATGCTCACAGGTTCTGCAGACT...ATGGAGGCAGGTGGTGAGTGGGGAAAACATGGGAGCTGCTGGGCTATTGGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGGGAGGATGGGAGCAGGCCATGTCTCCTCAGCACCGGGTCCACCAGCTTGTCAAAGGCAGAGCACATaGCGAAGAACATCCCCACAG | + |
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Preference number: 2 (lower is better) Translates to: SGRMGAGHVSSAPGPPACQRQST*RRTSPQ Trigger: CTGTGGGGATGTTCTTCGTCATGTGCTCTGCCTTTG...ACAAGCTGGTGGACCCGGTGCTGAGGAGACATGGCCTGCTCCCATCCTCCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGCATCAGCCAGGCCTGTGACAAGAGTCCATGATGGAGTAGACACAGCTCCTGCAGCAGCAGAACGGTaGCTGCCCAGGAGAGCATGG | + |
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Preference number: 2 (lower is better) Translates to: LASARPVTRVHDGVDTAPAAAER*LPRRAW Trigger: CCATGCTCTCCTGGGCAGCCACCGTTCTGCTGCTGC...AGGAGCTGTGTCTACTCCATCATGGACTCTTGTCACAGGCCTGGCTGATGCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR TCA 90 bp | CTGCCAATCTCCTGCCAGCTGCTGTCTGGTTTCAGTGAGGACATGGTGTCCTCAAGTCTGCAGAACCTGTaGGCATGCTGGCTGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: LPISCQLLSGFSEDMVSSSLQNL*ACWLAA Trigger: TGCAGCCAGCCAGCATGCTCACAGGTTCTGCAGACT...TGAGGACACCATGTCCTCACTGAAACCAGACAGCAGCTGGCAGGAGATTGGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGTAAGGAATAAGGATGGCAGCAGCAGAACGGTGGCTGCCCAGGAGAGCATGCCGCATCAAACATGGTaGGCCAAGCTGCAGGCAGCG | + |
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Preference number: 2 (lower is better) Translates to: FVRNKDGSSRTVAAQESMPHQTW*AKLQAA Trigger: CGCTGCCTGCAGCTTGGCTCACCATGTTTGATGCGG...CATGCTCTCCTGGGCAGCCACCGTTCTGCTGCTGCCATCCTTATTCCTTACAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR GCA 90 bp | CGCTCTGCATGGACTTGGGGGCAGCTGAGTATGCAAATTCCAGACCTGCTATACCCCATGATGGCGCTCTaGATGGACTTGGGGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: RSAWTWGQLSMQIPDLLYPMMAL*MDLGAA Trigger: AGCTGCCCCCAAGTCCATGCAGAGCGCCATCATGGG...GTATAGCAGGTCTGGAATTTGCATACTCAGCTGCCCCCAAGTCCATGCAGAGCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGTCTGGTTTCAGTGAGGACATGGTGTCCTCAATCACCACGGACACATGTCTGCCCAGGAGAGCATaGCTGGCTCAGGACTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LLSGFSEDMVSSITTDTCLPRRA*LAQDWQ Trigger: CTGCCAGTCCTGAGCCAGCCATGCTCTCCTGGGCAG...ACATGTGTCCGTGGTGATTGAGGACACCATGTCCTCACTGAAACCAGACAGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGCCAGCTGCTGTCTGGTTTCAGTGAGGACATGGTGTCCTCAATCACCACGGGCAGATGAGCCTACATaGCTGACCCACAAAGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: PASCCLVSVRTWCPQSPRADEPT*LTHKGL Trigger: AAGGCCTTTGTGGGTCAGTCATGTAGGCTCATCTGC...CCGTGGTGATTGAGGACACCATGTCCTCACTGAAACCAGACAGCAGCTGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR TCA 90 bp | CGGTACAAAGCTGGGCCAATAGCCCAGCAGCTCCCATGTTTTCCCCACTCACCACTTGAGAAGCAGACATaGGGCAGCCCCAAGTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: RYKAGPIAQQLPCFPHSPLEKQT*GSPKFE Trigger: CTCAAACTTGGGGCTGCCTCATGTCTGCTTCTCAAG...TGGTGAGTGGGGAAAACATGGGAGCTGCTGGGCTATTGGCCCAGCTTTGTACCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR TCA 90 bp | TGCAGCAAAGGCAGAGCACATGACGAAGAACATCCCCACAGCAATCCTCTTCAGCCGCATCAAACATGGTaGGCCAAGCTGCAGGCAGCG | + |
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Preference number: 2 (lower is better) Translates to: CSKGRAHDEEHPHSNPLQPHQTW*AKLQAA Trigger: CGCTGCCTGCAGCTTGGCTCACCATGTTTGATGCGG...CTGAAGAGGATTGCTGTGGGGATGTTCTTCGTCATGTGCTCTGCCTTTGCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
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| 3UTR-3UTR GCA 90 bp | TACAAAGCTGGGCCAATAGCCCAGCAGCTCCCATGTTTTCCCCACTCACCACCTAATCTAGCCTCAGTCTaGTTGCTGGCAGTGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: YKAGPIAQQLPCFPHSPPNLASV*LLAVPW Trigger: CCAGGGCACTGCCAGCAAGCAGACTGAGGCTAGATT...AGGTGGTGAGTGGGGAAAACATGGGAGCTGCTGGGCTATTGGCCCAGCTTTGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR TCA 90 bp | CCCACAGCAATCCTCTTCAGGGAGGATGGGAGCAGGCCATGTCTCCTCAGCACCTGTGATGGGTGGTGGTaGTACTTGAGATTTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: PTAILFREDGSRPCLLSTCDGWW*YLRFLE Trigger: TTCCAGAAATCTCAAGTATCACCACCACCCATCACA...GGTGCTGAGGAGACATGGCCTGCTCCCATCCTCCCTGAAGAGGATTGCTGTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
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| 3UTR-3UTR GCA 90 bp | GGACTGGCAGAGACCTTCAGTGAGAGAAGCCACATCCTCATCTCCTGGCAGGCCCCAGTCCAGACAACATaGAAGTTCAGAAGTTGGGAC | + |
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Preference number: 2 (lower is better) Translates to: GLAETFSERSHILISWQAPVQTT*KFRSWD Trigger: GTCCCAACTTCTGAACTTGCATGTTGTCTGGACTGG...GGCCTGCCAGGAGATGAGGATGTGGCTTCTCTCACTGAAGGTCTCTGCCAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR GCA 90 bp | CTAAGTCCTGCTGACCATAGTGACAGACATCTGAGATCTCAGCACTTGAGAAGCCAGCAGAACGGTGGCTaGCCAGGAGAGCATGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: LSPADHSDRHLRSQHLRSQQNGG*PGEHGW Trigger: CCAGCCATGCTCTCCTGGGCAGCCACCGTTCTGCTG...GCTTCTCAAGTGCTGAGATCTCAGATGTCTGTCACTATGGTCAGCAGGACTTAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR GCA 90 bp | AGATCTGCGTGGTGTAACTGCCAATCTCCTGCCAGCTGCTGTCTGGTTTCAGTGTCCCCACTCACCACCTaGCTCCATCCTTACTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: RSAWCNCQSPASCCLVSVSPLTT*LHPYCY Trigger: GTAGCAGTAAGGATGGAGGCAGGTGGTGAGTGGGGA...CACTGAAACCAGACAGCAGCTGGCAGGAGATTGGCAGTTACACCACGCAGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR GCA 90 bp | GACGAAGAACATCCCCACAGCAATCCTCTTCAGGGAGGATGGGAGCAGGCCATGACTCTCCAGGATTCCTaGAGCAAAGGCAGAGCACAT | + |
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Preference number: 2 (lower is better) Translates to: DEEHPHSNPLQGGWEQAMTLQDS*SKGRAH Trigger: ATGTGCTCTGCCTTTGCTGCAGGAATCCTGGAGAGT...CATGGCCTGCTCCCATCCTCCCTGAAGAGGATTGCTGTGGGGATGTTCTTCGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
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| 3UTR-3UTR TCA 90 bp | CCTGCAGCAAAGGCAGAGCACATGACGAAGAACATCCCCACAGCAATCCTCTTCGGCAGAGACCTTCAGTaGGAGAAGCCACATCCTCAT | + |
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Preference number: 2 (lower is better) Translates to: PAAKAEHMTKNIPTAILFGRDLQ*EKPHPH Trigger: ATGAGGATGTGGCTTCTCTCACTGAAGGTCTCTGCC...GAAGAGGATTGCTGTGGGGATGTTCTTCGTCATGTGCTCTGCCTTTGCTGCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCTGTCTGGTTTCAGTGAGGACATGGTGTCCTCAATCACCACGGACACATCATCAGCCAGGCCTGTaGCAAGAGTCCATGATGGAG | + |
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Preference number: 2 (lower is better) Translates to: SCCLVSVRTWCPQSPRTHHQPGL*QESMME Trigger: CTCCATCATGGACTCTTGTCACAGGCCTGGCTGATG...ATGTGTCCGTGGTGATTGAGGACACCATGTCCTCACTGAAACCAGACAGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR TCA 90 bp | AGATCTGCGTGGTGTAACTGCCAATCTCCTGCCAGCTGCTGTCTGGTTTCAGTGAGAAGAAGAGTCCCATaGTGGCGCTCTGCATGGACT | + |
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Preference number: 2 (lower is better) Translates to: RSAWCNCQSPASCCLVSVRRRVP*WRSAWT Trigger: AGTCCATGCAGAGCGCCATCATGGGACTCTTCTTCT...CACTGAAACCAGACAGCAGCTGGCAGGAGATTGGCAGTTACACCACGCAGATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR CCA 90 bp | TACAAAGCTGGGCCAATAGCCCAGCAGCTCCCATGTTTTCCCCACTCACCACCTAATGAGCACATACTGTaGGATCTGCCACCAGATGGG | + |
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Preference number: 2 (lower is better) Translates to: YKAGPIAQQLPCFPHSPPNEHIL*DLPPDG Trigger: CCCATCTGGTGGCAGATCCCACAGTATGTGCTCATT...AGGTGGTGAGTGGGGAAAACATGGGAGCTGCTGGGCTATTGGCCCAGCTTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAAGGCCTTGGCATCAGCCAGGCCTGTGACAAGAGTCCATGATGGAGTAGACCTCCTAGGGCTCTCTTaGCATCAACCACACTTTCAC | + |
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Preference number: 2 (lower is better) Translates to: TKALASARPVTRVHDGVDLLGLS*HQPHFH Trigger: GTGAAAGTGTGGTTGATGTCAAGAGAGCCCTAGGAG...GTCTACTCCATCATGGACTCTTGTCACAGGCCTGGCTGATGCCAAGGCCTTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR TCA 90 bp | ACATGCAAGTTCAGAAGTTGGGACACCAACAATCTAGCCTCAGTCTGCTTGCTGTCCACCCAATGGCCTTaGGAGACACCAGGGCCAACA | + |
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Preference number: 2 (lower is better) Translates to: TCKFRSWDTNNLASVCLLSTQWP*ETPGPT Trigger: TGTTGGCCCTGGTGTCTCTCAAGGCCATTGGGTGGA...CAGCAAGCAGACTGAGGCTAGATTGTTGGTGTCCCAACTTCTGAACTTGCATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR GCA 90 bp | CACACAACAGTTCAGTTGACAAACTCAGAACCCCAGATGTCAGTAACGGTACAACAGCAGAACGGTGGCTaGCCAGGAGAGCATGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: HTTVQLTNSEPQMSVTVQQQNGG*PGEHGW Trigger: CCAGCCATGCTCTCCTGGGCAGCCACCGTTCTGCTG...TTGTACCGTTACTGACATCTGGGGTTCTGAGTTTGTCAACTGAACTGTTGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR GCA 90 bp | TCCTATGCCTTGATGGAAGTGCTTGCTAATCGTAAAGGAGATGCTATGAGGAAGCAGCAGAACGGTGGCTaGCCAGGAGAGCATGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SYALMEVLANRKGDAMRKQQNGG*PGEHGW Trigger: CCAGCCATGCTCTCCTGGGCAGCCACCGTTCTGCTG...CTTCCTCATAGCATCTCCTTTACGATTAGCAAGCACTTCCATCAAGGCATAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR GCA 90 bp | TTGGCATCAGCCAGGCCTGTGACAAGAGTCCATGATGGAGTAGACACAGCTCCTACTCTCCAGGATTCCTaGAGCAAAGGCAGAGCACAT | + |
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Preference number: 2 (lower is better) Translates to: LASARPVTRVHDGVDTAPTLQDS*SKGRAH Trigger: ATGTGCTCTGCCTTTGCTGCAGGAATCCTGGAGAGT...AGGAGCTGTGTCTACTCCATCATGGACTCTTGTCACAGGCCTGGCTGATGCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR CCA 90 bp | TTGGGGGCAGCTGAGTATGCAAATTCCAGACCTGCTATACTTGCAAATATCTCACTGCCCAGGAGAGCATaGCTGGCTCAGGACTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LGAAEYANSRPAILANISLPRRA*LAQDWQ Trigger: CTGCCAGTCCTGAGCCAGCCATGCTCTCCTGGGCAG...TGAGATATTTGCAAGTATAGCAGGTCTGGAATTTGCATACTCAGCTGCCCCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAACATCCCCACAGCAATCCTCTTCAGGGAGGATGGGAGCAGGCCATGTCTCTGTGATGGGTGGTGGTaGTACTTGAGATTTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: KNIPTAILFREDGSRPCLCDGWW*YLRFLE Trigger: TTCCAGAAATCTCAAGTATCACCACCACCCATCACA...GAGACATGGCCTGCTCCCATCCTCCCTGAAGAGGATTGCTGTGGGGATGTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
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| 3UTR-3UTR GCA 90 bp | GCCATGTCTCCTCAGCACCGGGTCCACCAGCTTGTCCTTCAGTGGGATGAGCAGAAAGCATATGTGGTCTaGATTTGGAAATACACTGTC | + |
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Preference number: 2 (lower is better) Translates to: AMSPQHRVHQLVLQWDEQKAYVV*IWKYTV Trigger: GACAGTGTATTTCCAAATGCAGACCACATATGCTTT...CTGCTCATCCCACTGAAGGACAAGCTGGTGGACCCGGTGCTGAGGAGACATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144603.6 ENSMUST00000153832.8 |
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| 3UTR-3UTR GCA 90 bp | ACAGTTCAGTTGACAAACTCAGAACCCCAGATGTCAGTAACGGTACAAAGCTGGTCCCCACTCACCACCTaGCTCCATCCTTACTGCTAC | + |
|
Preference number: 2 (lower is better) Translates to: TVQLTNSEPQMSVTVQSWSPLTT*LHPYCY Trigger: GTAGCAGTAAGGATGGAGGCAGGTGGTGAGTGGGGA...CCAGCTTTGTACCGTTACTGACATCTGGGGTTCTGAGTTTGTCAACTGAACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGGAAGTAACAATATTTGTAAGGAATAAGGATGGCAGCAGCAGAACGGTGGCTTGTGAGCATGCTGGCTaGCTGCATCAGGTCCTCGTG | + |
|
Preference number: 2 (lower is better) Translates to: EEVTIFVRNKDGSSRTVACEHAG*LHQVLV Trigger: CACGAGGACCTGATGCAGCCAGCCAGCATGCTCACA...AGCCACCGTTCTGCTGCTGCCATCCTTATTCCTTACAAATATTGTTACTTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR TCA 90 bp | CATCCTTACTGCTACACAAAGTCAAGTTCTCAGAAAAGATCTGCGTGGTGTAACAGTCTGCAGAACCTGTaGGCATGCTGGCTGGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: HPYCYTKSSSQKRSAWCNSLQNL*ACWLAA Trigger: TGCAGCCAGCCAGCATGCTCACAGGTTCTGCAGACT...GTTACACCACGCAGATCTTTTCTGAGAACTTGACTTTGTGTAGCAGTAAGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR TCA 90 bp | CAAAACACAGCAACACACACAACAGTTCAGTTGACAAACTCAGAACCCCAGATGCATCAGCCAGGCCTGTaGCAAGAGTCCATGATGGAG | + |
|
Preference number: 2 (lower is better) Translates to: QNTATHTTVQLTNSEPQMHQPGL*QESMME Trigger: CTCCATCATGGACTCTTGTCACAGGCCTGGCTGATG...CATCTGGGGTTCTGAGTTTGTCAACTGAACTGTTGTGTGTGTTGCTGTGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAATCCTCCTATGCCTTGATGGAAGTGCTTGCTAATCGTAAAGGAGATGCTAATCTAGCCTCAGTCTaGTTGCTGGCAGTGCCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: RESSYALMEVLANRKGDANLASV*LLAVPW Trigger: CCAGGGCACTGCCAGCAAGCAGACTGAGGCTAGATT...AGCATCTCCTTTACGATTAGCAAGCACTTCCATCAAGGCATAGGAGGATTCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCAGGCCTGTGACAAGAGTCCATGATGGAGTAGACACAGCTCCTAGGGCTCTCTGCAAATTCCAGACCTaGTATACTTGCAAATATCTC | + |
|
Preference number: 2 (lower is better) Translates to: ARPVTRVHDGVDTAPRALCKFQT*YTCKYL Trigger: GAGATATTTGCAAGTATAGCAGGTCTGGAATTTGCA...GAGAGCCCTAGGAGCTGTGTCTACTCCATCATGGACTCTTGTCACAGGCCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCAGGCCTGTGACAAGAGTCCATGATGGAGTAGACACAGCTCCTAGGGCTCTCAAAGCATATGTGGTCTaGATTTGGAAATACACTGTC | + |
|
Preference number: 2 (lower is better) Translates to: ARPVTRVHDGVDTAPRALKAYVV*IWKYTV Trigger: GACAGTGTATTTCCAAATGCAGACCACATATGCTTT...GAGAGCCCTAGGAGCTGTGTCTACTCCATCATGGACTCTTGTCACAGGCCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000153832.8 |
||
| 3UTR-3UTR CCA 90 bp | CAAAACACAGCAACACACACAACAGTTCAGTTGACAAACTCAGAACCCCAGATGTGGCTGGCTCAGGACTaGCAGAGACCTTCAGTGAGA | + |
|
Preference number: 2 (lower is better) Translates to: QNTATHTTVQLTNSEPQMWLAQD*QRPSVR Trigger: TCTCACTGAAGGTCTCTGCCAGTCCTGAGCCAGCCA...CATCTGGGGTTCTGAGTTTGTCAACTGAACTGTTGTGTGTGTTGCTGTGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR CAA 90 bp | GTGACAAGAGTCCATGATGGAGTAGACACAGCTCCTAGGGCTCTCTaGACATCAACCACACTTTCACCTCTAAAGAGAATCCTCCTATGC | + |
|
Preference number: 2 (lower is better) Translates to: VTRVHDGVDTAPRAL*TSTTLSPLKRILLC Trigger: GCATAGGAGGATTCTCTTTAGAGGTGAAAGTGTGGTTGATGTCAAGAGAGCCCTAGGAGCTGTGTCTACTCCATCATGGACTCTTGTCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR GCA 90 bp | ACATGCAAGTTCAGAAGTTGGGACACCAACAATCTAGCCTCAGTCTGCTTGCTGCCAGTCCAGACAACATaGAAGTTCAGAAGTTGGGAC | + |
|
Preference number: 2 (lower is better) Translates to: TCKFRSWDTNNLASVCLLPVQTT*KFRSWD Trigger: GTCCCAACTTCTGAACTTGCATGTTGTCTGGACTGG...CAGCAAGCAGACTGAGGCTAGATTGTTGGTGTCCCAACTTCTGAACTTGCATGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGTGGGATGAGCAGGAGGATGAGCACCGCATCAAACATGGTGAGCCAAGCTGCTCTGTAAAGCATATGTaGTCTGCATTTGGAAATACA | + |
|
Preference number: 2 (lower is better) Translates to: QWDEQEDEHRIKHGEPSCSVKHM*SAFGNT Trigger: TGTATTTCCAAATGCAGACCACATATGCTTTACAGA...GCAGCTTGGCTCACCATGTTTGATGCGGTGCTCATCCTCCTGCTCATCCCACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144603.6 ENSMUST00000153832.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGTCTTCTCCTTTACCAGGTCCAGCCTTTTACTCTCCAGGATTCCTGCAGCAAGGTGGTGGTGATACTTaGGATTTCTGGAATCTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: WSSPLPGPAFYSPGFLQQGGGDT*DFWNLQ Trigger: TTGAAGATTCCAGAAATCTCAAGTATCACCACCACC...TTGCTGCAGGAATCCTGGAGAGTAAAAGGCTGGACCTGGTAAAGGAGAAGACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144603.6 ENSMUST00000153832.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAAAGGCCTTGGCATCAGCCAGGCCTGTGACAAGAGTCCATGATGGAGTAGACTGCAAATTCCAGACCTaGTATACTTGCAAATATCTC | + |
|
Preference number: 2 (lower is better) Translates to: TKALASARPVTRVHDGVDCKFQT*YTCKYL Trigger: GAGATATTTGCAAGTATAGCAGGTCTGGAATTTGCA...GTCTACTCCATCATGGACTCTTGTCACAGGCCTGGCTGATGCCAAGGCCTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR GCA 90 bp | CTCTTGACATCAACCACACTTTCACCTCTAAAGAGAATCCTCCTATGCCTTGATACTCTCCAGGATTCCTaGAGCAAAGGCAGAGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: LLTSTTLSPLKRILLCLDTLQDS*SKGRAH Trigger: ATGTGCTCTGCCTTTGCTGCAGGAATCCTGGAGAGT...ATCAAGGCATAGGAGGATTCTCTTTAGAGGTGAAAGTGTGGTTGATGTCAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTTTACCAGGTCCAGCCTTTTACTCTCCAGGATTCCTGCAGCAAAGGCAGAGTCTGTAAAGCATATGTaGTCTGCATTTGGAAATACA | + |
|
Preference number: 2 (lower is better) Translates to: SFTRSSLLLSRIPAAKAESVKHM*SAFGNT Trigger: TGTATTTCCAAATGCAGACCACATATGCTTTACAGA...CTCTGCCTTTGCTGCAGGAATCCTGGAGAGTAAAAGGCTGGACCTGGTAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144603.6 ENSMUST00000153832.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCTTGACATCAACCACACTTTCACCTCTAAAGAGAATCCTCCTATGCCTTGATTGTGATGGGTGGTGGTaGTACTTGAGATTTCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: LLTSTTLSPLKRILLCLDCDGWW*YLRFLE Trigger: TTCCAGAAATCTCAAGTATCACCACCACCCATCACA...ATCAAGGCATAGGAGGATTCTCTTTAGAGGTGAAAGTGTGGTTGATGTCAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCCAGCCTAGTCTAATAAAAACTTCTTTATCTCAGTCAACAAAACCTACTTTCACACAACAGTTCAGTTaGCAAACTCAGAACCCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: GQPSLIKTSLSQSTKPTFTQQFS*QTQNPR Trigger: TCTGGGGTTCTGAGTTTGTCAACTGAACTGTTGTGT...GAAAGTAGGTTTTGTTGACTGAGATAAAGAAGTTTTTATTAGACTAGGCTGGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATCCTCTTCAGGGAGGATGGGAGCAGGCCATGTCTCCTCAGCACCGGGTCCAACCGGGTCCACCAGCTaGTCCTTCAGTGGGATGAGC | + |
|
Preference number: 3 (lower is better) Translates to: QSSSGRMGAGHVSSAPGPTGSTS*SFSGMS Trigger: GCTCATCCCACTGAAGGACAAGCTGGTGGACCCGGT...TGGACCCGGTGCTGAGGAGACATGGCCTGCTCCCATCCTCCCTGAAGAGGATTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
||
| 3UTR CCA 72 bp | ATGGCAGCAGCAGAACGGTGGCTGCCCAGGAGAGCATaGCTGGCTCAGGACTGGCAGAGACCTTCAGTGAGA | + |
|
Preference number: 3 (lower is better) Translates to: MAAAERWLPRRA*LAQDWQRPSVR Trigger: TCTCACTGAAGGTCTCTGCCAGTCCTGAGCCAGCCATGCTCTCCTGGGCAGCCACCGTTCTGCTGCTGCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCACAGACACAATGAGGAAGAGCAGCAGCGTAGCTCCCTGGATGGCGGCCAGCGCGCTCTGCATGGACTaGGGGGCAGCTGAGTATGCA | + |
|
Preference number: 3 (lower is better) Translates to: FTDTMRKSSSVAPWMAASALCMD*GAAEYA Trigger: TGCATACTCAGCTGCCCCCAAGTCCATGCAGAGCGC...GCTGGCCGCCATCCAGGGAGCTACGCTGCTGCTCTTCCTCATTGTGTCTGTGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGAAGAACATCCCCACAGCAATCCTCTTCAGGGAGGATGGGAGCAGGCCATGTACCGGGTCCACCAGCTaGTCCTTCAGTGGGATGAGC | + |
|
Preference number: 3 (lower is better) Translates to: TKNIPTAILFREDGSRPCTGSTS*SFSGMS Trigger: GCTCATCCCACTGAAGGACAAGCTGGTGGACCCGGT...ACATGGCCTGCTCCCATCCTCCCTGAAGAGGATTGCTGTGGGGATGTTCTTCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAAGCTGGGCCAATAGCCCAGCAGCTCCCATGTTTTCCCCACTCACCACCTGCGCTCCTAGGGCTCTCTaGACATCAACCACACTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: QSWANSPAAPMFSPLTTCAPRAL*TSTTLS Trigger: TGAAAGTGTGGTTGATGTCAAGAGAGCCCTAGGAGC...GCAGGTGGTGAGTGGGGAAAACATGGGAGCTGCTGGGCTATTGGCCCAGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR TCA 72 bp | AGGACCCAATGCCAGAGAAGAAGAAGAAGAGTCCCATaGTGGCGCTCTGCATGGACTTGGGGGCAGCTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: RTQCQRRRRRVP*WRSAWTWGQLS Trigger: ACTCAGCTGCCCCCAAGTCCATGCAGAGCGCCATCATGGGACTCTTCTTCTTCTTCTCTGGCATTGGGTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR TCA 72 bp | CCCAATGGCCTTGAGAGACACCAGGGCCAACAGTCCTaGGCCCACAAAGGACCCAATGCCAGAGAAGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PNGLERHQGQQS*AHKGPNAREEE Trigger: TTCTTCTTCTCTGGCATTGGGTCCTTTGTGGGCTCAGGACTGTTGGCCCTGGTGTCTCTCAAGGCCATTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR TCA 72 bp | ACTGCCAATCTCCTGCCAGCTGCTGTCTGGTTTCAGTaGGGACATGGTGTCCTCAATCACCACGGACACATG | + |
|
Preference number: 3 (lower is better) Translates to: TANLLPAAVWFQ*GHGVLNHHGHM Trigger: CATGTGTCCGTGGTGATTGAGGACACCATGTCCTCACTGAAACCAGACAGCAGCTGGCAGGAGATTGGCAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR GCA 72 bp | CCGGGCATAGGGAGGGAGAAGCCAGTCCAGACAACATaGAAGTTCAGAAGTTGGGACACCAACAATCTAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PGIGREKPVQTT*KFRSWDTNNLA Trigger: GGCTAGATTGTTGGTGTCCCAACTTCTGAACTTGCATGTTGTCTGGACTGGCTTCTCCCTCCCTATGCCCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR CCA 72 bp | TGTGGGATCTGCCACCAGATGGGCAAGTCAGCAGCATaGTACACCACACCACCAATGGTCTGGTTAATGGTC | + |
|
Preference number: 3 (lower is better) Translates to: CGICHQMGKSAA*YTTPPMVWLMV Trigger: GACCATTAACCAGACCATTGGTGGTGTGGTGTACCATGCTGCTGACTTGCCCATCTGGTGGCAGATCCCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| 3UTR-3UTR CAA 90 bp | TCAGCAGCATGGTACACCACACCACCAATGGTCTGGTTAATGGTCTTCTCCTTTACCGGGTCCACCAGCTaGTCCTTCAGTGGGATGAGC | + |
|
Preference number: 3 (lower is better) Translates to: SAAWYTTPPMVWLMVFSFTGSTS*SFSGMS Trigger: GCTCATCCCACTGAAGGACAAGCTGGTGGACCCGGT...AAAGGAGAAGACCATTAACCAGACCATTGGTGGTGTGGTGTACCATGCTGCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR TCA 72 bp | CAAAACCTACTTTCTGAGCAGATGAGCCTACATGACTaGCCCACAAAGGCCTTGGCATCAGCCAGGCCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: QNLLSEQMSLHD*PTKALASARPV Trigger: CACAGGCCTGGCTGATGCCAAGGCCTTTGTGGGTCAGTCATGTAGGCTCATCTGCTCAGAAAGTAGGTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR TCA 72 bp | TACTCTCCAGGATTCCTGCAGCAAAGGCAGAGCACATaGCGAAGAACATCCCCACAGCAATCCTCTTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: YSPGFLQQRQST*RRTSPQQSSSG Trigger: CCCTGAAGAGGATTGCTGTGGGGATGTTCTTCGTCATGTGCTCTGCCTTTGCTGCAGGAATCCTGGAGAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
||
| 3UTR TCA 72 bp | CAAAATCTGTATGACTGCTCATCCACCCAATGGCCTTaGGAGACACCAGGGCCAACAGTCCTGAGCCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: QNLYDCSSTQWP*ETPGPTVLSPQ Trigger: TTGTGGGCTCAGGACTGTTGGCCCTGGTGTCTCTCAAGGCCATTGGGTGGATGAGCAGTCATACAGATTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR GCA 72 bp | AGCCCAGCAGCTCCCATGTTTTCCCCACTCACCACCTaGCTCCATCCTTACTGCTACACAAAGTCAAGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SPAAPMFSPLTT*LHPYCYTKSSS Trigger: AGAACTTGACTTTGTGTAGCAGTAAGGATGGAGGCAGGTGGTGAGTGGGGAAAACATGGGAGCTGCTGGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR CAA 90 bp | CAATCTCCTGCCAGCTGCTGTCTGGTTTCAGTGAGGACATGGTGTCCTCAATCAGCTCCTAGGGCTCTCTaGACATCAACCACACTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: QSPASCCLVSVRTWCPQSAPRAL*TSTTLS Trigger: TGAAAGTGTGGTTGATGTCAAGAGAGCCCTAGGAGC...TGATTGAGGACACCATGTCCTCACTGAAACCAGACAGCAGCTGGCAGGAGATTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGCATCAGCCAGGCCTGTGACAAGAGTCCATGATGGAGTAGACACAGCTCCTCACACAACAGTTCAGTaGACAAACTCAGAACCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LASARPVTRVHDGVDTAPHTTVQ*TNSEPQ Trigger: CTGGGGTTCTGAGTTTGTCAACTGAACTGTTGTGTG...AGGAGCTGTGTCTACTCCATCATGGACTCTTGTCACAGGCCTGGCTGATGCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR TCA 72 bp | TGCAGGTGGCAGCTGTTGATGTTCCCAAAATCTGTATaGCTGCTCATCCACCCAATGGCCTTGAGAGACACC | + |
|
Preference number: 3 (lower is better) Translates to: CRWQLLMFPKSV*LLIHPMALRDT Trigger: GGTGTCTCTCAAGGCCATTGGGTGGATGAGCAGTCATACAGATTTTGGGAACATCAACAGCTGCCACCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR CCA 72 bp | TCTCCTGCCAGCTGCTGTCTGGTTTCAGTGAGGACATaGTGTCCTCAATCACCACGGACACATGTGCTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: SPASCCLVSVRT*CPQSPRTHVLK Trigger: TTTAAGCACATGTGTCCGTGGTGATTGAGGACACCATGTCCTCACTGAAACCAGACAGCAGCTGGCAGGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR CCA 72 bp | GAGAAGCCAGTCCAGACAACATGCAAGTTCAGAAGTTaGGACACCAACAATCTAGCCTCAGTCTGCTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EKPVQTTCKFRS*DTNNLASVCLL Trigger: CAGCAAGCAGACTGAGGCTAGATTGTTGGTGTCCCAACTTCTGAACTTGCATGTTGTCTGGACTGGCTTCTC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR CCA 72 bp | TGCAAATATCTCACTGATGCCAATGAGCACATACTGTaGGATCTGCCACCAGATGGGCAAGTCAGCAGCATG | + |
|
Preference number: 3 (lower is better) Translates to: CKYLTDANEHIL*DLPPDGQVSSM Trigger: CATGCTGCTGACTTGCCCATCTGGTGGCAGATCCCACAGTATGTGCTCATTGGCATCAGTGAGATATTTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR CAA 90 bp | ACATGCAAGTTCAGAAGTTGGGACACCAACAATCTAGCCTCAGTCTGCTTGCTGCTGAGATCTCAGCACTaGAGAAGCAGACATGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TCKFRSWDTNNLASVCLLLRSQH*RSRHEA Trigger: TGCCTCATGTCTGCTTCTCAAGTGCTGAGATCTCAG...CAGCAAGCAGACTGAGGCTAGATTGTTGGTGTCCCAACTTCTGAACTTGCATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCACTCACCACCTGCCTCCATCCTTACTGCTACACAAAGTCAAGTTCTCAGAATGCAGGTGGCAGCTGTaGATGTTCCCAAAATCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: PTHHLPPSLLLHKVKFSECRWQL*MFPKSV Trigger: TACAGATTTTGGGAACATCAACAGCTGCCACCTGCA...TTCTGAGAACTTGACTTTGTGTAGCAGTAAGGATGGAGGCAGGTGGTGAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR CAA 90 bp | TACAAAGCTGGGCCAATAGCCCAGCAGCTCCCATGTTTTCCCCACTCACCACCTATATGTGGTCTGCATTaGGAAATACACTGTCCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: YKAGPIAQQLPCFPHSPPICGLH*EIHCPV Trigger: TACTGGACAGTGTATTTCCAAATGCAGACCACATAT...AGGTGGTGAGTGGGGAAAACATGGGAGCTGCTGGGCTATTGGCCCAGCTTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000153832.8 |
||
| 3UTR GCA 72 bp | AAGTCAAGTTCTCAGAAAAGATCTGCGTGGTGTAACTaGCAATCTCCTGCCAGCTGCTGTCTGGTTTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: KSSSQKRSAWCN*QSPASCCLVSV Trigger: CACTGAAACCAGACAGCAGCTGGCAGGAGATTGGCAGTTACACCACGCAGATCTTTTCTGAGAACTTGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTTACCAGGTCCAGCCTTTTACTCTCCAGGATTCCTGCAGCAAAGGCAGAGCAATATGTGGTCTGCATTaGGAAATACACTGTCCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: LYQVQPFTLQDSCSKGRAICGLH*EIHCPV Trigger: TACTGGACAGTGTATTTCCAAATGCAGACCACATAT...TGCTCTGCCTTTGCTGCAGGAATCCTGGAGAGTAAAAGGCTGGACCTGGTAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000144603.6 ENSMUST00000153832.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTGACATCAACCACACTTTCACCTCTAAAGAGAATCCTCCTATGCCTTGATCTGAGATCTCAGCACTaGAGAAGCAGACATGAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LLTSTTLSPLKRILLCLDLRSQH*RSRHEA Trigger: TGCCTCATGTCTGCTTCTCAAGTGCTGAGATCTCAG...ATCAAGGCATAGGAGGATTCTCTTTAGAGGTGAAAGTGTGGTTGATGTCAAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR TCA 72 bp | GTGGTGGTGATACTTGAGATTTCTGGAATCTTCAAATaGAGACTCTGTAAAGCATATGTGGTCTGCATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: VVVILEISGIFK*RLCKAYVVCIW Trigger: CCAAATGCAGACCACATATGCTTTACAGAGTCTTCATTTGAAGATTCCAGAAATCTCAAGTATCACCACCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144603.6 ENSMUST00000153832.8 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGCAGAACGGTGGCTGCCCAGGAGAGCATGGCTGGCTCAGGACTGGCAGAAGAGCAGCAGCGCCTaGCTGGCCTGCGCGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: AAAERWLPRRAWLAQDWQKSSSA*LACAPS Trigger: GGAGGGCGCGCAGGCCAGCCAGGCGCTGCTGCTCTT...CTGCCAGTCCTGAGCCAGCCATGCTCTCCTGGGCAGCCACCGTTCTGCTGCTGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR GCA 90 bp | AGAACGGTGGCTGCCCAGGAGAGCATGGCTGGCTCAGGACTGGCAGAGACCTTCAGCGCCTGGCTGGCCTaGGCGCCCTCCCAGTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RTVAAQESMAGSGLAETFSAWLA*APSQSN Trigger: GTTCGACTGGGAGGGCGCGCAGGCCAGCCAGGCGCT...GAAGGTCTCTGCCAGTCCTGAGCCAGCCATGCTCTCCTGGGCAGCCACCGTTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR CCA 90 bp | CAATCCTCTTCAGGGAGGATGGGAGCAGGCCATGTCTCCTCAGCACCGGGTCCAGCAGCAGCGCCTGGCTaGCCTGCGCGCCCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: QSSSGRMGAGHVSSAPGPAAAPG*PARPPS Trigger: ACTGGGAGGGCGCGCAGGCCAGCCAGGCGCTGCTGC...TGGACCCGGTGCTGAGGAGACATGGCCTGCTCCCATCCTCCCTGAAGAGGATTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR CCA 90 bp | TACAAAGCTGGGCCAATAGCCCAGCAGCTCCCATGTTTTCCCCACTCACCACCTGCAGCAGCGCCTGGCTaGCCTGCGCGCCCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: YKAGPIAQQLPCFPHSPPAAAPG*PARPPS Trigger: ACTGGGAGGGCGCGCAGGCCAGCCAGGCGCTGCTGC...AGGTGGTGAGTGGGGAAAACATGGGAGCTGCTGGGCTATTGGCCCAGCTTTGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGCTGCTGTCTGGTTTCAGTGAGGACATGGTGTCCTCAATCACCACGGACAGCAGCAGCGCCTGGCTaGCCTGCGCGCCCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASCCLVSVRTWCPQSPRTAAAPG*PARPPS Trigger: ACTGGGAGGGCGCGCAGGCCAGCCAGGCGCTGCTGC...TGTCCGTGGTGATTGAGGACACCATGTCCTCACTGAAACCAGACAGCAGCTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR CCA 90 bp | GCCAGGCCTGTGACAAGAGTCCATGATGGAGTAGACACAGCTCCTAGGGCTCTCAAGAGCAGCAGCGCCTaGCTGGCCTGCGCGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARPVTRVHDGVDTAPRALKSSSA*LACAPS Trigger: GGAGGGCGCGCAGGCCAGCCAGGCGCTGCTGCTCTT...GAGAGCCCTAGGAGCTGTGTCTACTCCATCATGGACTCTTGTCACAGGCCTGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR TCA 90 bp | ATGGCAGCAGCAGAACGGTGGCTGCCCAGGAGAGCATGGCTGGCTCAGGACTGGTCCACCCAATGGCCTTaGGAGACACCAGGGCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: MAAAERWLPRRAWLAQDWSTQWP*ETPGPT Trigger: TGTTGGCCCTGGTGTCTCTCAAGGCCATTGGGTGGA...CCAGTCCTGAGCCAGCCATGCTCTCCTGGGCAGCCACCGTTCTGCTGCTGCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
||
| CDS-3UTR CCA 90 bp | GCAGCAGCAGAACGGTGGCTGCCCAGGAGAGCATGGCTGGCTCAGGACTGGCAGGTGATGAAGACACTCTaGCCACAGAGGAAGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AAAERWLPRRAWLAQDWQVMKTL*PQRKTR Trigger: CCTGGTCTTCCTCTGTGGCCAGAGTGTCTTCATCAC...CTGCCAGTCCTGAGCCAGCCATGCTCTCCTGGGCAGCCACCGTTCTGCTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| 3UTR CAA 72 bp | AGCAGGCCATGTCTCCTCAGCACCGGGTCCACCAGCTaGTCCTTCAGTGGGATGAGCAGGAGGATGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SRPCLLSTGSTS*SFSGMSRRMST Trigger: GGTGCTCATCCTCCTGCTCATCCCACTGAAGGACAAGCTGGTGGACCCGGTGCTGAGGAGACATGGCCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
||
| CDS-3UTR TCA 90 bp | CAAAGCTGGGCCAATAGCCCAGCAGCTCCCATGTTTTCCCCACTCACCACCTGCCCGCATCAAACATGGTaGGCCAAGCTGCAGGCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QSWANSPAAPMFSPLTTCPHQTW*AKLQAA Trigger: CGCTGCCTGCAGCTTGGCTCACCATGTTTGATGCGG...GCAGGTGGTGAGTGGGGAAAACATGGGAGCTGCTGGGCTATTGGCCCAGCTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
||
| CDS-3UTR GCA 90 bp | CAATCTCCTGCCAGCTGCTGTCTGGTTTCAGTGAGGACATGGTGTCCTCAATCAAGCGCCTGGCTGGCCTaGGCGCCCTCCCAGTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QSPASCCLVSVRTWCPQSSAWLA*APSQSN Trigger: GTTCGACTGGGAGGGCGCGCAGGCCAGCCAGGCGCT...TGATTGAGGACACCATGTCCTCACTGAAACCAGACAGCAGCTGGCAGGAGATTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR CCA 90 bp | ACGAAGAACATCCCCACAGCAATCCTCTTCAGGGAGGATGGGAGCAGGCCATGTCCTGGGACGGAAGCCTaGAGCCAGGACAAGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: TKNIPTAILFREDGSRPCPGTEA*SQDKAG Trigger: CCCTGCCTTGTCCTGGCTCCAGGCTTCCGTCCCAGG...ACATGGCCTGCTCCCATCCTCCCTGAAGAGGATTGCTGTGGGGATGTTCTTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144603.6 |
||
| CDS-3UTR TCA 90 bp | TACAAAGCTGGGCCAATAGCCCAGCAGCTCCCATGTTTTCCCCACTCACCACCTCCTCGATCTTTAACCTaGTCGGCGCCGAAGGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: YKAGPIAQQLPCFPHSPPPRSLT*SAPKGV Trigger: CACGCCCTTCGGCGCCGATCAGGTTAAAGATCGAGG...AGGTGGTGAGTGGGGAAAACATGGGAGCTGCTGGGCTATTGGCCCAGCTTTGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAGCCAGTCCAGACAACATGCAAGTTCAGAAGTTGGGACACCAACAATCTAGCACCAGGTTGGCCGTaGCGCCGTAGAAGGCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: EKPVQTTCKFRSWDTNNLAPGWP*RRRRPR Trigger: GCGCGGCCTTCTACGGCGTCACGGCCAACCTGGTGC...TAGATTGTTGGTGTCCCAACTTCTGAACTTGCATGTTGTCTGGACTGGCTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031367.15 ENSMUST00000153832.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGGTTAATGGTCTTCTCCTTTACCAGGTCCAGCCTTTTACTCTCCAGGATTGCACCAGGTTGGCCGTaGCGCCGTAGAAGGCCGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VWLMVFSFTRSSLLLSRIAPGWP*RRRRPR Trigger: GCGCGGCCTTCTACGGCGTCACGGCCAACCTGGTGC...AATCCTGGAGAGTAAAAGGCTGGACCTGGTAAAGGAGAAGACCATTAACCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153832.8 |
||
| CDS-3UTR GCA 90 bp | CCACCTGCCTCCATCCTTACTGCTACACAAAGTCAAGTTCTCAGAAAAGATCTGAGCGCCTGGCTGGCCTaGGCGCCCTCCCAGTCGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PPASILTATQSQVLRKDLSAWLA*APSQSN Trigger: GTTCGACTGGGAGGGCGCGCAGGCCAGCCAGGCGCT...CAGATCTTTTCTGAGAACTTGACTTTGTGTAGCAGTAAGGATGGAGGCAGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR CCA 90 bp | AGCAGGCCATGTCTCCTCAGCACCGGGTCCACCAGCTTGTCCTTCAGTGGGATGTCTCCGAGTGGCTTCTaGACCTCGATCTTTAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRPCLLSTGSTSLSFSGMSPSGF*TSIFNL Trigger: CAGGTTAAAGATCGAGGTCCAGAAGCCACTCGGAGA...CATCCCACTGAAGGACAAGCTGGTGGACCCGGTGCTGAGGAGACATGGCCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAGGATGGGAGCAGGCCATGTCTCCTCAGCACCGGGTCCACCAGCTTGTCCTCTGTAAAGCATATGTaGTCTGCATCCACTTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: REDGSRPCLLSTGSTSLSSVKHM*SASTSP Trigger: CGGAGAAGTGGATGCAGACCACATATGCTTTACAGA...GGACAAGCTGGTGGACCCGGTGCTGAGGAGACATGGCCTGCTCCCATCCTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000124569.8 |
||
| CDS-3UTR TCA 90 bp | CTGCTGTCTGGTTTCAGTGAGGACATGGTGTCCTCAATCACCACGGACACATGTCCTCGATCTTTAACCTaGTCGGCGCCGAAGGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLSGFSEDMVSSITTDTCPRSLT*SAPKGV Trigger: CACGCCCTTCGGCGCCGATCAGGTTAAAGATCGAGG...ACATGTGTCCGTGGTGATTGAGGACACCATGTCCTCACTGAAACCAGACAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR GCA 90 bp | CTGCTGTCTGGTTTCAGTGAGGACATGGTGTCCTCAATCACCACGGACACATGTCCCATGATGGCGCTCTaGATGGACTTGGGGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLSGFSEDMVSSITTDTCPMMAL*MDLGAA Trigger: AGCTGCCCCCAAGTCCATGCAGAGCGCCATCATGGG...ACATGTGTCCGTGGTGATTGAGGACACCATGTCCTCACTGAAACCAGACAGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
||
| CDS-3UTR TCA 90 bp | GCAGAACGGTGGCTGCCCAGGAGAGCATGGCTGGCTCAGGACTGGCAGAGACCTTCCAGTAAAACCAATTaGAAAATCTCCGAGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: AERWLPRRAWLAQDWQRPSSKTN*KISEWL Trigger: AAGCCACTCGGAGATTTTTCAATTGGTTTTACTGGA...AGGTCTCTGCCAGTCCTGAGCCAGCCATGCTCTCCTGGGCAGCCACCGTTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR TCA 90 bp | AGAACGGTGGCTGCCCAGGAGAGCATGGCTGGCTCAGGACTGGCAGAGACCTTCGGTGGTGGTGATACTTaGGATTTCTGGAATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RTVAAQESMAGSGLAETFGGGDT*DFWNLQ Trigger: TTGAAGATTCCAGAAATCTCAAGTATCACCACCACC...GAAGGTCTCTGCCAGTCCTGAGCCAGCCATGCTCTCCTGGGCAGCCACCGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
||
| CDS-3UTR CCA 90 bp | TACAAAGCTGGGCCAATAGCCCAGCAGCTCCCATGTTTTCCCCACTCACCACCTGTGATGAAGACACTCTaGCCACAGAGGAAGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YKAGPIAQQLPCFPHSPPVMKTL*PQRKTR Trigger: CCTGGTCTTCCTCTGTGGCCAGAGTGTCTTCATCAC...AGGTGGTGAGTGGGGAAAACATGGGAGCTGCTGGGCTATTGGCCCAGCTTTGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR TCA 90 bp | TTCAGAAGTTGGGACACCAACAATCTAGCCTCAGTCTGCTTGCTGGCAGTGCCCCAAAGGCAGAGCACATaGCGAAGAACATCCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FRSWDTNNLASVCLLAVPQRQST*RRTSPQ Trigger: CTGTGGGGATGTTCTTCGTCATGTGCTCTGCCTTTG...GGGCACTGCCAGCAAGCAGACTGAGGCTAGATTGTTGGTGTCCCAACTTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
||
| CDS-3UTR TCA 90 bp | CAATCTCCTGCCAGCTGCTGTCTGGTTTCAGTGAGGACATGGTGTCCTCAATCAGGACTTGGGGGCAGCTaGGTATGCAAATTCCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: QSPASCCLVSVRTWCPQSGLGGS*VCKFQT Trigger: GGTCTGGAATTTGCATACTCAGCTGCCCCCAAGTCC...TGATTGAGGACACCATGTCCTCACTGAAACCAGACAGCAGCTGGCAGGAGATTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
||
| CDS-3UTR GCA 90 bp | ATGGCAGCAGCAGAACGGTGGCTGCCCAGGAGAGCATGGCTGGCTCAGGACTGGTGCAAATTCCAGACCTaGTATACTTGCAAATATCTC | + |
|
Preference number: 4 (lower is better) Translates to: MAAAERWLPRRAWLAQDWCKFQT*YTCKYL Trigger: GAGATATTTGCAAGTATAGCAGGTCTGGAATTTGCA...CCAGTCCTGAGCCAGCCATGCTCTCCTGGGCAGCCACCGTTCTGCTGCTGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
||
| CDS-3UTR CCA 90 bp | GCCAGCTGCTGTCTGGTTTCAGTGAGGACATGGTGTCCTCAATCACCACGGACATCTCCGAGTGGCTTCTaGACCTCGATCTTTAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASCCLVSVRTWCPQSPRTSPSGF*TSIFNL Trigger: CAGGTTAAAGATCGAGGTCCAGAAGCCACTCGGAGA...TGTCCGTGGTGATTGAGGACACCATGTCCTCACTGAAACCAGACAGCAGCTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR CCA 90 bp | TACAAAGCTGGGCCAATAGCCCAGCAGCTCCCATGTTTTCCCCACTCACCACCTAGACCAGGAAAGCAATaGCCACACAGACTGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YKAGPIAQQLPCFPHSPPRPGKQ*PHRLWE Trigger: TTCCCACAGTCTGTGTGGCCATTGCTTTCCTGGTCT...AGGTGGTGAGTGGGGAAAACATGGGAGCTGCTGGGCTATTGGCCCAGCTTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR CCA 90 bp | ACGAAGAACATCCCCACAGCAATCCTCTTCAGGGAGGATGGGAGCAGGCCATGTAGACCAGGAAAGCAATaGCCACACAGACTGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TKNIPTAILFREDGSRPCRPGKQ*PHRLWE Trigger: TTCCCACAGTCTGTGTGGCCATTGCTTTCCTGGTCT...ACATGGCCTGCTCCCATCCTCCCTGAAGAGGATTGCTGTGGGGATGTTCTTCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
||
| CDS-3UTR CCA 90 bp | GCATCAGCCAGGCCTGTGACAAGAGTCCATGATGGAGTAGACACAGCTCCTAGGAGACCAGGAAAGCAATaGCCACACAGACTGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASARPVTRVHDGVDTAPRRPGKQ*PHRLWE Trigger: TTCCCACAGTCTGTGTGGCCATTGCTTTCCTGGTCT...CCTAGGAGCTGTGTCTACTCCATCATGGACTCTTGTCACAGGCCTGGCTGATGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR TCA 90 bp | GCAAGCCCTGAGGCCTTAGAGTCTGCAGAACCTGTGAGCATGCTGGCTGGCTGCTCCAGTAAAACCAATTaGAAAATCTCCGAGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ASPEALESAEPVSMLAGCSSKTN*KISEWL Trigger: AAGCCACTCGGAGATTTTTCAATTGGTTTTACTGGA...GCAGCCAGCCAGCATGCTCACAGGTTCTGCAGACTCTAAGGCCTCAGGGCTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR TCA 90 bp | CCTGCCAGCTGCTGTCTGGTTTCAGTGAGGACATGGTGTCCTCAATCACCACGGTGTGATGGGTGGTGGTaGTACTTGAGATTTCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PASCCLVSVRTWCPQSPRCDGWW*YLRFLE Trigger: TTCCAGAAATCTCAAGTATCACCACCACCCATCACA...CCGTGGTGATTGAGGACACCATGTCCTCACTGAAACCAGACAGCAGCTGGCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
||
| CDS-3UTR GCA 90 bp | GGACTGGCAGAGACCTTCAGTGAGAGAAGCCACATCCTCATCTCCTGGCAGGCCCAGACCTGCTATACTTaGAAATATCTCACTGATGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLAETFSERSHILISWQAQTCYT*KYLTDA Trigger: GGCATCAGTGAGATATTTGCAAGTATAGCAGGTCTG...GGCCTGCCAGGAGATGAGGATGTGGCTTCTCTCACTGAAGGTCTCTGCCAGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
||
| CDS-3UTR CCA 90 bp | TTCAGAAGTTGGGACACCAACAATCTAGCCTCAGTCTGCTTGCTGGCAGTGCCCTCTCCGAGTGGCTTCTaGACCTCGATCTTTAACCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRSWDTNNLASVCLLAVPSPSGF*TSIFNL Trigger: CAGGTTAAAGATCGAGGTCCAGAAGCCACTCGGAGA...GGGCACTGCCAGCAAGCAGACTGAGGCTAGATTGTTGGTGTCCCAACTTCTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR TCA 90 bp | AGAGAATCCTCCTATGCCTTGATGGAAGTGCTTGCTAATCGTAAAGGAGATGCTCCTCGATCTTTAACCTaGTCGGCGCCGAAGGGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: RESSYALMEVLANRKGDAPRSLT*SAPKGV Trigger: CACGCCCTTCGGCGCCGATCAGGTTAAAGATCGAGG...AGCATCTCCTTTACGATTAGCAAGCACTTCCATCAAGGCATAGGAGGATTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR TCA 90 bp | AGATCTGCGTGGTGTAACTGCCAATCTCCTGCCAGCTGCTGTCTGGTTTCAGTGGCAGGTGGCAGCTGTTaGTGTTCCCAAAATCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RSAWCNCQSPASCCLVSVAGGSC*CSQNLY Trigger: ATACAGATTTTGGGAACATCAACAGCTGCCACCTGC...CACTGAAACCAGACAGCAGCTGGCAGGAGATTGGCAGTTACACCACGCAGATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
||
| CDS-3UTR CCA 90 bp | TGCAGCAAAGGCAGAGCACATGACGAAGAACATCCCCACAGCAATCCTCTTCAGAGACCAGGAAAGCAATaGCCACACAGACTGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: CSKGRAHDEEHPHSNPLQRPGKQ*PHRLWE Trigger: TTCCCACAGTCTGTGTGGCCATTGCTTTCCTGGTCT...CTGAAGAGGATTGCTGTGGGGATGTTCTTCGTCATGTGCTCTGCCTTTGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
||
| CDS-3UTR CCA 90 bp | ACCACACCACCAATGGTCTGGTTAATGGTCTTCTCCTTTACCAGGTCCAGCCTTGTGATGAAGACACTCTaGCCACAGAGGAAGACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTPPMVWLMVFSFTRSSLVMKTL*PQRKTR Trigger: CCTGGTCTTCCTCTGTGGCCAGAGTGTCTTCATCAC...AAGGCTGGACCTGGTAAAGGAGAAGACCATTAACCAGACCATTGGTGGTGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
||
| CDS-3UTR CCA 90 bp | CTAAGTCCTGCTGACCATAGTGACAGACATCTGAGATCTCAGCACTTGAGAAGCCGCTCTGCATGGACTTaGGGGCAGCTGAGTATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LSPADHSDRHLRSQHLRSRSAWT*GQLSMQ Trigger: TTGCATACTCAGCTGCCCCCAAGTCCATGCAGAGCG...GCTTCTCAAGTGCTGAGATCTCAGATGTCTGTCACTATGGTCAGCAGGACTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
||
| 3UTR CAA 72 bp | GCTGACCATAGTGACAGACATCTGAGATCTCAGCACTaGAGAAGCAGACATGAGGCAGCCCCAAGTTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ADHSDRHLRSQH*RSRHEAAPSLR Trigger: CCTCAAACTTGGGGCTGCCTCATGTCTGCTTCTCAAGTGCTGAGATCTCAGATGTCTGTCACTATGGTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR TCA 90 bp | GACGAAGAACATCCCCACAGCAATCCTCTTCAGGGAGGATGGGAGCAGGCCATGTCCAGTAAAACCAATTaGAAAATCTCCGAGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DEEHPHSNPLQGGWEQAMSSKTN*KISEWL Trigger: AAGCCACTCGGAGATTTTTCAATTGGTTTTACTGGA...CATGGCCTGCTCCCATCCTCCCTGAAGAGGATTGCTGTGGGGATGTTCTTCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 |
||
| 3UTR CAA 72 bp | GGAGAAGCCAGTCCAGACAACATGCAAGTTCAGAAGTaGGGACACCAACAATCTAGCCTCAGTCTGCTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GEASPDNMQVQK*GHQQSSLSLLA Trigger: AGCAAGCAGACTGAGGCTAGATTGTTGGTGTCCCAACTTCTGAACTTGCATGTTGTCTGGACTGGCTTCTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCAATCTCCTGCCAGCTGCTGTCTGGTTTCAGTGAGGACATGGTGTCCTCATCCAGTAAAACCAATTaGAAAATCTCCGAGTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPISCQLLSGFSEDMVSSSSKTN*KISEWL Trigger: AAGCCACTCGGAGATTTTTCAATTGGTTTTACTGGA...TGAGGACACCATGTCCTCACTGAAACCAGACAGCAGCTGGCAGGAGATTGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| CDS-3UTR TCA 90 bp | GAGAAGCCAGTCCAGACAACATGCAAGTTCAGAAGTTGGGACACCAACAATCTAAGAAGAAGAGTCCCATaGTGGCGCTCTGCATGGACT | + |
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Preference number: 4 (lower is better) Translates to: EKPVQTTCKFRSWDTNNLRRRVP*WRSAWT Trigger: AGTCCATGCAGAGCGCCATCATGGGACTCTTCTTCT...TAGATTGTTGGTGTCCCAACTTCTGAACTTGCATGTTGTCTGGACTGGCTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
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| CDS-3UTR GCA 90 bp | CTGCTGTCTGGTTTCAGTGAGGACATGGTGTCCTCAATCACCACGGACACATGTCCACAAAGGACCCAATaGCAGAGAAGAAGAAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LLSGFSEDMVSSITTDTCPQRTQ*QRRRRR Trigger: TCTTCTTCTTCTTCTCTGGCATTGGGTCCTTTGTGG...ACATGTGTCCGTGGTGATTGAGGACACCATGTCCTCACTGAAACCAGACAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
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| CDS-3UTR CCA 90 bp | CTAAGTCCTGCTGACCATAGTGACAGACATCTGAGATCTCAGCACTTGAGAAGCAATGAGCACATACTGTaGGATCTGCCACCAGATGGG | + |
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Preference number: 4 (lower is better) Translates to: LSPADHSDRHLRSQHLRSNEHIL*DLPPDG Trigger: CCCATCTGGTGGCAGATCCCACAGTATGTGCTCATT...GCTTCTCAAGTGCTGAGATCTCAGATGTCTGTCACTATGGTCAGCAGGACTTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
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| CDS-3UTR CCA 90 bp | TCCTATGCCTTGATGGAAGTGCTTGCTAATCGTAAAGGAGATGCTATGAGGAAGGTGATGAAGACACTCTaGCCACAGAGGAAGACCAGG | + |
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Preference number: 4 (lower is better) Translates to: SYALMEVLANRKGDAMRKVMKTL*PQRKTR Trigger: CCTGGTCTTCCTCTGTGGCCAGAGTGTCTTCATCAC...CTTCCTCATAGCATCTCCTTTACGATTAGCAAGCACTTCCATCAAGGCATAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| CDS-3UTR GCA 90 bp | CACACAACAGTTCAGTTGACAAACTCAGAACCCCAGATGTCAGTAACGGTACAAACTCTCCAGGATTCCTaGAGCAAAGGCAGAGCACAT | + |
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Preference number: 4 (lower is better) Translates to: HTTVQLTNSEPQMSVTVQTLQDS*SKGRAH Trigger: ATGTGCTCTGCCTTTGCTGCAGGAATCCTGGAGAGT...TTGTACCGTTACTGACATCTGGGGTTCTGAGTTTGTCAACTGAACTGTTGTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
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| 3UTR CAA 72 bp | GTCCATGATGGAGTAGACACAGCTCCTAGGGCTCTCTaGACATCAACCACACTTTCACCTCTAAAGAGAATC | + |
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Preference number: 4 (lower is better) Translates to: VHDGVDTAPRAL*TSTTLSPLKRI Trigger: GATTCTCTTTAGAGGTGAAAGTGTGGTTGATGTCAAGAGAGCCCTAGGAGCTGTGTCTACTCCATCATGGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| CDS-3UTR TCA 90 bp | ACAGTTCAGTTGACAAACTCAGAACCCCAGATGTCAGTAACGGTACAAAGCTGGTGTTTAGAAGATTGCTaGAAGACTCCAAGGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: TVQLTNSEPQMSVTVQSWCLEDC*KTPRPS Trigger: TGAAGGCCTTGGAGTCTTTCAGCAATCTTCTAAACA...CCAGCTTTGTACCGTTACTGACATCTGGGGTTCTGAGTTTGTCAACTGAACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
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| CDS-3UTR CCA 90 bp | ACATGCAAGTTCAGAAGTTGGGACACCAACAATCTAGCCTCAGTCTGCTTGCTGTCTGTAAAGCATATGTaGTCTGCATTTGGAAATACA | + |
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Preference number: 4 (lower is better) Translates to: TCKFRSWDTNNLASVCLLSVKHM*SAFGNT Trigger: TGTATTTCCAAATGCAGACCACATATGCTTTACAGA...CAGCAAGCAGACTGAGGCTAGATTGTTGGTGTCCCAACTTCTGAACTTGCATGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
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| CDS-3UTR CCA 90 bp | GAATCTTCAAATGAAGACTCTGTAAAGCATATGTGGTCTGCATTTGGAAATACATCTCCGAGTGGCTTCTaGACCTCGATCTTTAACCTG | + |
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Preference number: 4 (lower is better) Translates to: ESSNEDSVKHMWSAFGNTSPSGF*TSIFNL Trigger: CAGGTTAAAGATCGAGGTCCAGAAGCCACTCGGAGA...TGTATTTCCAAATGCAGACCACATATGCTTTACAGAGTCTTCATTTGAAGATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000144603.6 ENSMUST00000153832.8 |
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| 3UTR CAA 72 bp | ATTATACAAAACACAGCAACACACACAACAGTTCAGTaGACAAACTCAGAACCCCAGATGTCAGTAACGGTA | + |
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Preference number: 4 (lower is better) Translates to: IIQNTATHTTVQ*TNSEPQMSVTV Trigger: TACCGTTACTGACATCTGGGGTTCTGAGTTTGTCAACTGAACTGTTGTGTGTGTTGCTGTGTTTTGTATAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| CDS-3UTR GCA 90 bp | GGCCAGCCTAGTCTAATAAAAACTTCTTTATCTCAGTCAACAAAACCTACTTTCAAAGCATATGTGGTCTaGATTTGGAAATACACTGTC | + |
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Preference number: 4 (lower is better) Translates to: GQPSLIKTSLSQSTKPTFKAYVV*IWKYTV Trigger: GACAGTGTATTTCCAAATGCAGACCACATATGCTTT...GAAAGTAGGTTTTGTTGACTGAGATAAAGAAGTTTTTATTAGACTAGGCTGGCC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
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| CDS GCA 90 bp | GCACGCCGCACGCCGCCCCGCGAACACCGCGGACGCCGCCGACACTaGCGGACGCCGCGAACCCAACAGCGGCGCCCGCTCGCCCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: ARRTPPREHRGRRRH*RTPRTQQRRPLALH Trigger: ATGGAGGGCGAGCGGGCGCCGCTGTTGGGTTCGCGGCGTCCGGCAGTGTCGGCGGCGTCCGCGGTGTTCGCGGGGCGGCGTGCGGCGTGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031367.15 ENSMUST00000153832.8 |
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| CDS TCA 90 bp | CCAGCAGCGGGAAGGCCAGCAGGCCCAGCAGGTAGAGGGCCAGGCTaGGCAGGATGGCGCGGGCCCGGCCGAGGCGGGCGTCGGCGAGCC | + |
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Preference number: 5 (lower is better) Translates to: PAAGRPAGPAGRGPG*AGWRGPGRGGRRRA Trigger: GGCTCGCCGACGCCCGCCTCGGCCGGGCCCGCGCCATCCTGCTCAGCCTGGCCCTCTACCTGCTGGGCCTGCTGGCCTTCCCGCTGCTGG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| CDS-3UTR CAA 90 bp | CAATCCTCTTCAGGGAGGATGGGAGCAGGCCATGTCTCCTCAGCACCGGGTCCAGGCGTGATGTTGGCCTaGACCGTGGCCACCCCGAGA | + |
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Preference number: 5 (lower is better) Translates to: QSSSGRMGAGHVSSAPGPGVMLA*TVATPR Trigger: TCTCGGGGTGGCCACGGTCAAGGCCAACATCACGCC...TGGACCCGGTGCTGAGGAGACATGGCCTGCTCCCATCCTCCCTGAAGAGGATTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| CDS-3UTR CAA 90 bp | CAGGCCATGTCTCCTCAGCACCGGGTCCACCAGCTTGTCCTTCAGTGGGATGAGGGCGTGATGTTGGCCTaGACCGTGGCCACCCCGAGA | + |
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Preference number: 5 (lower is better) Translates to: QAMSPQHRVHQLVLQWDEGVMLA*TVATPR Trigger: TCTCGGGGTGGCCACGGTCAAGGCCAACATCACGCC...CTCATCCCACTGAAGGACAAGCTGGTGGACCCGGTGCTGAGGAGACATGGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| CDS-3UTR CAA 90 bp | ACAGACACAATGAGGAAGAGCAGCAGCGTAGCTCCCTGGATGGCGGCCAGCAGGCCGAAGGGCGTGATGTaGGCCTTGACCGTGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: TDTMRKSSSVAPWMAASRPKGVM*ALTVAT Trigger: GGTGGCCACGGTCAAGGCCAACATCACGCCCTTCGG...CCTGCTGGCCGCCATCCAGGGAGCTACGCTGCTGCTCTTCCTCATTGTGTCTGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| CDS-3UTR CAA 90 bp | AGATCTGCGTGGTGTAACTGCCAATCTCCTGCCAGCTGCTGTCTGGTTTCAGTGGGCGTGATGTTGGCCTaGACCGTGGCCACCCCGAGA | + |
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Preference number: 5 (lower is better) Translates to: RSAWCNCQSPASCCLVSVGVMLA*TVATPR Trigger: TCTCGGGGTGGCCACGGTCAAGGCCAACATCACGCC...CACTGAAACCAGACAGCAGCTGGCAGGAGATTGGCAGTTACACCACGCAGATCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| CDS-3UTR CAA 90 bp | CTGCTGTCTGGTTTCAGTGAGGACATGGTGTCCTCAATCACCACGGACACATGTCCGAAGGGCGTGATGTaGGCCTTGACCGTGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: LLSGFSEDMVSSITTDTCPKGVM*ALTVAT Trigger: GGTGGCCACGGTCAAGGCCAACATCACGCCCTTCGG...ACATGTGTCCGTGGTGATTGAGGACACCATGTCCTCACTGAAACCAGACAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| CDS-3UTR CAA 90 bp | ATAGTAAGGCACTCACCACCATCATCCGGGCATAGGGAGGGAGAAGCCAGTCCAGCGCTCTGCATGGACTaGGGGGCAGCTGAGTATGCA | + |
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Preference number: 5 (lower is better) Translates to: IVRHSPPSSGHREGEASPALCMD*GAAEYA Trigger: TGCATACTCAGCTGCCCCCAAGTCCATGCAGAGCGC...TGGACTGGCTTCTCCCTCCCTATGCCCGGATGATGGTGGTGAGTGCCTTACTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
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| CDS-3UTR CAA 90 bp | GCTGGGCCAATAGCCCAGCAGCTCCCATGTTTTCCCCACTCACCACCTGCCTCCTGCAGGTGGCAGCTGTaGATGTTCCCAAAATCTGTA | + |
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Preference number: 5 (lower is better) Translates to: AGPIAQQLPCFPHSPPASCRWQL*MFPKSV Trigger: TACAGATTTTGGGAACATCAACAGCTGCCACCTGCA...GGAGGCAGGTGGTGAGTGGGGAAAACATGGGAGCTGCTGGGCTATTGGCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
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| CDS-3UTR CAA 90 bp | GCTGGGCCAATAGCCCAGCAGCTCCCATGTTTTCCCCACTCACCACCTGCCTCCACTGTGTTTAGAAGATaGCTGAAAGACTCCAAGGCC | + |
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Preference number: 5 (lower is better) Translates to: AGPIAQQLPCFPHSPPASTVFRR*LKDSKA Trigger: GGCCTTGGAGTCTTTCAGCAATCTTCTAAACACAGT...GGAGGCAGGTGGTGAGTGGGGAAAACATGGGAGCTGCTGGGCTATTGGCCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
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| CDS-3UTR CAA 90 bp | AGCTGCTGTCTGGTTTCAGTGAGGACATGGTGTCCTCAATCACCACGGACACATACCGGGTCCACCAGCTaGTCCTTCAGTGGGATGAGC | + |
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Preference number: 5 (lower is better) Translates to: SCCLVSVRTWCPQSPRTHTGSTS*SFSGMS Trigger: GCTCATCCCACTGAAGGACAAGCTGGTGGACCCGGT...ATGTGTCCGTGGTGATTGAGGACACCATGTCCTCACTGAAACCAGACAGCAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
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| CDS-3UTR CAA 90 bp | TTTGTAAGGAATAAGGATGGCAGCAGCAGAACGGTGGCTGCCCAGGAGAGCATGAACACGGGCACAATCTaGACCAGGGCTTTCACGTCT | + |
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Preference number: 5 (lower is better) Translates to: FVRNKDGSSRTVAAQESMNTGTI*TRAFTS Trigger: AGACGTGAAAGCCCTGGTCAAGATTGTGCCCGTGTT...CATGCTCTCCTGGGCAGCCACCGTTCTGCTGCTGCCATCCTTATTCCTTACAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
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| CDS-3UTR CAA 90 bp | ATGCAAGTTCAGAAGTTGGGACACCAACAATCTAGCCTCAGTCTGCTTGCTGGCATCCACCCAATGGCCTaGAGAGACACCAGGGCCAAC | + |
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Preference number: 5 (lower is better) Translates to: MQVQKLGHQQSSLSLLAGIHPMA*RDTRAN Trigger: GTTGGCCCTGGTGTCTCTCAAGGCCATTGGGTGGAT...GCCAGCAAGCAGACTGAGGCTAGATTGTTGGTGTCCCAACTTCTGAACTTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
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| CDS TCA 90 bp | CGCGACATCTTACATGAATCAAACAGACTGTGTTTAGAAGATTGCTaGAAGACTCCAAGGCCTTCACCACTTCTCCGCTGCCCTCCTCTC | + |
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Preference number: 5 (lower is better) Translates to: RDILHESNRLCLEDC*KTPRPSPLLRCPPL Trigger: GAGAGGAGGGCAGCGGAGAAGTGGTGAAGGCCTTGGAGTCTTTCAGCAATCTTCTAAACACAGTCTGTTTGATTCATGTAAGATGTCGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
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| CDS TCA 90 bp | CCAGGAAAGCAATGGCCACACAGACTGTGGGAATCAGGTAGCCTGTaGAAAAGCTCACATTCTGCTGAATATAGGCAATACCTCCTAATG | + |
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Preference number: 5 (lower is better) Translates to: PGKQWPHRLWESGSL*KSSHSAEYRQYLLM Trigger: CATTAGGAGGTATTGCCTATATTCAGCAGAATGTGAGCTTTTTCACAGGCTACCTGATTCCCACAGTCTGTGTGGCCATTGCTTTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 ENSMUST00000155321.2 |
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| CDS TCA 90 bp | TTCCACTTTGTCCTCTGTGAACGGCCCTCCACGCGACATCTTACATaGATCAAACAGACTGTGTTTAGAAGATTGCTGAAAGACTCCAAG | + |
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Preference number: 5 (lower is better) Translates to: FHFVLCERPSTRHLT*IKQTVFRRLLKDSK Trigger: CTTGGAGTCTTTCAGCAATCTTCTAAACACAGTCTGTTTGATTCATGTAAGATGTCGCGTGGAGGGCCGTTCACAGAGGACAAAGTGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
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| CDS-3UTR CAA 90 bp | CTCTTGACATCAACCACACTTTCACCTCTAAAGAGAATCCTCCTATGCCTTGATATATGTGGTCTGCATTaGGAAATACACTGTCCAGTA | + |
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Preference number: 5 (lower is better) Translates to: LLTSTTLSPLKRILLCLDICGLH*EIHCPV Trigger: TACTGGACAGTGTATTTCCAAATGCAGACCACATAT...ATCAAGGCATAGGAGGATTCTCTTTAGAGGTGAAAGTGTGGTTGATGTCAAGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
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| CDS GCA 72 bp | ACGACGCTGACCCGTTGGGGAAGGGCGCCGAGCAGTTaGGCACGAGCTCGGGCCGCGGGTCCCCGCAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: TTLTRWGRAPSS*ARARAAGPRRG Trigger: TCCTCTGCGGGGACCCGCGGCCCGAGCTCGTGCGCAACTGCTCGGCGCCCTTCCCCAACGGGTCAGCGTCGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| CDS CCA 72 bp | GCACTGCCGTCAGGAGGCTTGGTGATGAAGACACTCTaGCCACAGAGGAAGACCAGGAAAGCAATGGCCACA | + |
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Preference number: 6 (lower is better) Translates to: ALPSGGLVMKTL*PQRKTRKAMAT Trigger: TGTGGCCATTGCTTTCCTGGTCTTCCTCTGTGGCCAGAGTGTCTTCATCACCAAGCCTCCTGACGGCAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 ENSMUST00000155321.2 |
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| CDS CAA 90 bp | GTCAGAATTCTGAACATGTCAGTGAAGGCACTGCCGTCAGGAGGCTaGGTGATGAAGACACTCTGGCCACAGAGGAAGACCAGGAAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: VRILNMSVKALPSGG*VMKTLWPQRKTRKA Trigger: TGCTTTCCTGGTCTTCCTCTGTGGCCAGAGTGTCTTCATCACCAAGCCTCCTGACGGCAGTGCCTTCACTGACATGTTCAGAATTCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000144603.6 ENSMUST00000153832.8 ENSMUST00000155321.2 |
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| CDS CAA 90 bp | AAGAACACGGGCACAATCTTGACCAGGGCTTTCACGTCTTCCACTTaGTCCTCTGTGAACGGCCCTCCACGCGACATCTTACATGAATCA | + |
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Preference number: 6 (lower is better) Translates to: KNTGTILTRAFTSST*SSVNGPPRDILHES Trigger: TGATTCATGTAAGATGTCGCGTGGAGGGCCGTTCACAGAGGACAAAGTGGAAGACGTGAAAGCCCTGGTCAAGATTGTGCCCGTGTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031367.15 ENSMUST00000198486.5 |
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| CDS GCA 72 bp | GAAGTAGTAATGCAGGTGGCAGCTGTTGATGTTCCCTaGAGCAAAGGCAGAGCACATGACGAAGAACATCCC | + |
|
Preference number: 6 (lower is better) Translates to: EVVMQVAAVDVP*SKGRAHDEEHP Trigger: GGGATGTTCTTCGTCATGTGCTCTGCCTTTGCTGCAGGGAACATCAACAGCTGCCACCTGCATTACTACTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198486.5 |
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| CDS TCA 72 bp | AGTAAGGAATCAGAGCCAAGAACACGGGCACAATCTTaGCCAGGGCTTTCACGTCTTCCACTTTGTCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SKESEPRTRAQS*PGLSRLPLCPL Trigger: CAGAGGACAAAGTGGAAGACGTGAAAGCCCTGGTCAAGATTGTGCCCGTGTTCTTGGCTCTGATTCCTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000152727.2 ENSMUST00000198486.5 |
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| CDS CCA 72 bp | CCAGTAAAACCAATTGAAAAATCTCCGAGTGGCTTCTaGACCTCGATCTTTAACCTGATCGGCGCCGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PVKPIEKSPSGF*TSIFNLIGAEG Trigger: CCCTTCGGCGCCGATCAGGTTAAAGATCGAGGTCCAGAAGCCACTCGGAGATTTTTCAATTGGTTTTACTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031367.15 ENSMUST00000124569.8 ENSMUST00000153832.8 |
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| CDS CCA 72 bp | CCAGTAAAACCAATTGAAAAATCTCCGAGTGGCTTCTaGACCTCGATCTTTAACCTGGGACGGAAGCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PVKPIEKSPSGF*TSIFNLGRKPG Trigger: TCCAGGCTTCCGTCCCAGGTTAAAGATCGAGGTCCAGAAGCCACTCGGAGATTTTTCAATTGGTTTTACTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000144603.6 ENSMUST00000155321.2 |
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| CDS TCA 72 bp | GTCCTCTGTGAACGGCCCTCCACGCGACATCTTACATaGATCAAACAGACTGTGTTTAGAAGATTGCTGAAA | + |
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Preference number: 6 (lower is better) Translates to: VLCERPSTRHLT*IKQTVFRRLLK Trigger: TTTCAGCAATCTTCTAAACACAGTCTGTTTGATTCATGTAAGATGTCGCGTGGAGGGCCGTTCACAGAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031367.15 |
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