Pregenerated sensors for SLC15A3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024737Ensembl transcript IDs: ENSMUST00000025646.3
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 72 bp | GGAACCACTTCATTCTACTGTTGGGTACAGAATAAATaGGAAAAGAATGGGCATAGCTGGTACTGCTGTGAC | + |
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Preference number: 3 (lower is better) Translates to: GTTSFYCWVQNK*EKNGHSWYCCD Trigger: GTCACAGCAGTACCAGCTATGCCCATTCTTTTCTCATTTATTCTGTACCCAACAGTAGAATGAAGTGGTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR TCA 90 bp | GGAGGGCGCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTACAGAGGAGTGTGGCCCGTaGTGCCTGTTGGCCGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: GGRMPLIYGNHFILLLGTEECGP*CLLAVP Trigger: TGGGACGGCCAACAGGCATCACGGGCCACACTCCTC...TGTACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGCGCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CCA 90 bp | AATGAGAAAAGAATGGGCATAGCTGGTACTGCTGTGACACTCTCTGTCAGGGTGCGAGCGCTGGGAGGCTaGGTCCTGGCGAGTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: NEKRMGIAGTAVTLSVRVRALGG*VLASPL Trigger: GAGAGGACTCGCCAGGACCCAGCCTCCCAGCGCTCG...CACCCTGACAGAGAGTGTCACAGCAGTACCAGCTATGCCCATTCTTTTCTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR TCA 90 bp | GGAGGGCGCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTACAGGAGCCTTGGCAGCTTaGGGATGGGCAGGCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: GGRMPLIYGNHFILLLGTGALAA*GWAGRF Trigger: GAACCTGCCTGCCCATCCTCAAGCTGCCAAGGCTCC...TGTACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGCGCCCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CCA 90 bp | GGGAGGGCGCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTACGCAGGCAGGTTCCAGTaGCAACTCGGGCATCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: GRAHAPYLWEPLHSTVGYAGRFQ*QLGHLS Trigger: GGAGAGATGCCCGAGTTGCCACTGGAACCTGCCTGC...GTACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGCGCCCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CCA 90 bp | GGAGGGCGCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTACACTGGACCAGGAGCCTTaGCAGCTTGAGGATGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GGRMPLIYGNHFILLLGTLDQEP*QLEDGQ Trigger: CTGCCCATCCTCAAGCTGCCAAGGCTCCTGGTCCAG...TGTACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGCGCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR GCA 90 bp | AGGGAGGGCGCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTACCCAGGGCCATTTTCTaGAGAGATGAGGGCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: REGACPLFMGTTSFYCWVPRAIF*RDEGSS Trigger: GCTGCTGCCCTCATCTCTGCAGAAAATGGCCCTGGG...TACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGCGCCCTCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CCA 90 bp | AATGAGAAAAGAATGGGCATAGCTGGTACTGCTGTGACACTCTCTGTCAGGGTGACACCAAGTAGAGGGTaGTCGCGCAGTAGGGGCTGG | + |
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Preference number: 4 (lower is better) Translates to: NEKRMGIAGTAVTLSVRVTPSRG*SRSRGW Trigger: CCAGCCCCTACTGCGCGACCACCCTCTACTTGGTGT...CACCCTGACAGAGAGTGTCACAGCAGTACCAGCTATGCCCATTCTTTTCTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR GCA 90 bp | AGGGAGGGCGCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTACCCATAATTGCACCCTaGATGGAGCGTGGGGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: REGACPLFMGTTSFYCWVPIIAP*MERGAS Trigger: AGAAGCCCCACGCTCCATGCAGGGTGCAATTATGGG...TACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGCGCCCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CCA 90 bp | AATGAGAAAAGAATGGGCATAGCTGGTACTGCTGTGACACTCTCTGTCAGGGTGGGAGAAGGTCCAGGCTaGTTAGACCTCTGGTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: NEKRMGIAGTAVTLSVRVGEGPG*LDLWSG Trigger: GCCTGACCAGAGGTCTAACCAGCCTGGACCTTCTCC...CACCCTGACAGAGAGTGTCACAGCAGTACCAGCTATGCCCATTCTTTTCTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CCA 90 bp | AGGGAGGGCGCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTACCGATGAGCAGGTACTaGGGGATCTGCCACCAGATA | + |
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Preference number: 4 (lower is better) Translates to: REGACPLFMGTTSFYCWVPMSRY*GICHQI Trigger: TATCTGGTGGCAGATCCCCCAGTACCTGCTCATCGG...TACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGCGCCCTCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR TCA 90 bp | GGGAGGGCGCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTACAAGCTTCAGCATAGATaGCACTTGGCTGCCTGTTGG | + |
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Preference number: 4 (lower is better) Translates to: GRAHAPYLWEPLHSTVGYKLQHR*HLAACW Trigger: CCAACAGGCAGCCAAGTGTCATCTATGCTGAAGCTT...GTACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGCGCCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR GCA 90 bp | AGGGAGGGCGCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTAGAAGATGCCCATAATTaGACCCTGCATGGAGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: REGACPLFMGTTSFYCWVEDAHN*TLHGAW Trigger: CCACGCTCCATGCAGGGTGCAATTATGGGCATCTTC...TACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGCGCCCTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CCA 90 bp | AATGAGAAAAGAATGGGCATAGCTGGTACTGCTGTGACACTCTCTGTCAGGGTGTGTTCCCAAAGTCCTTaGGGCAGTACATCCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: NEKRMGIAGTAVTLSVRVCSQSP*GSTSSP Trigger: GGGGCTGGATGTACTGCCCCAAGGACTTTGGGAACA...CACCCTGACAGAGAGTGTCACAGCAGTACCAGCTATGCCCATTCTTTTCTCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR GCA 90 bp | AATGAGAAAAGAATGGGCATAGCTGGTACTGCTGTGACACTCTCTGTCAGGGTGAGGAAGCTGATGTTCTaGTCGATGAAAGCCACCACC | + |
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Preference number: 4 (lower is better) Translates to: NEKRMGIAGTAVTLSVRVRKLMF*SMKATT Trigger: GGTGGTGGCTTTCATCGAGCAGAACATCAGCTTCCT...CACCCTGACAGAGAGTGTCACAGCAGTACCAGCTATGCCCATTCTTTTCTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CCA 90 bp | AATGAGAAAAGAATGGGCATAGCTGGTACTGCTGTGACACTCTCTGTCAGGGTGCCAGCACCTGGAAGTTaGCCATATCTTCTTGTGGAG | + |
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Preference number: 4 (lower is better) Translates to: NEKRMGIAGTAVTLSVRVPAPGS*PYLLVE Trigger: CTCCACAAGAAGATATGGCCAACTTCCAGGTGCTGG...CACCCTGACAGAGAGTGTCACAGCAGTACCAGCTATGCCCATTCTTTTCTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CCA 90 bp | ATAAATGAGAAAAGAATGGGCATAGCTGGTACTGCTGTGACACTCTCTGTCAGGGGATCACCGCAACATTaGCCAGTAGGAGCCAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: INEKRMGIAGTAVTLSVRGSPQH*PVGARL Trigger: AAGCCTGGCTCCTACTGGCCAATGTTGCGGTGATCC...CCTGACAGAGAGTGTCACAGCAGTACCAGCTATGCCCATTCTTTTCTCATTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR TCA 90 bp | ATAAATGAGAAAAGAATGGGCATAGCTGGTACTGCTGTGACACTCTCTGTCAGGTCCAATAGAACCAGTTaGAGAAGCGGCGGGTGGCAT | + |
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Preference number: 4 (lower is better) Translates to: INEKRMGIAGTAVTLSVRSNRTS*RSGGWH Trigger: ATGCCACCCGCCGCTTCTTCAACTGGTTCTATTGGA...CCTGACAGAGAGTGTCACAGCAGTACCAGCTATGCCCATTCTTTTCTCATTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR TCA 90 bp | AGAATAAATGAGAAAAGAATGGGCATAGCTGGTACTGCTGTGACACTCTCTGTCCATTTTCTGCAGAGATaGGGGCAGCAGCTTGCACCG | + |
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Preference number: 4 (lower is better) Translates to: RINEKRMGIAGTAVTLSVHFLQR*GQQLAP Trigger: CGGTGCAAGCTGCTGCCCTCATCTCTGCAGAAAATG...GACAGAGAGTGTCACAGCAGTACCAGCTATGCCCATTCTTTTCTCATTTATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CCA 90 bp | GCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTACAGAATAAACACTTTCAGAGTCCCTaGAAGAGGACCTCCGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: ACPLFMGTTSFYCWVQNKHFQSP*KRTSGR Trigger: CCTGCCGGAGGTCCTCTTCCAGGGACTCTGAAAGTG...TTTATTCTGTACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CCA 90 bp | ATAAATGAGAAAAGAATGGGCATAGCTGGTACTGCTGTGACACTCTCTGTCAGGAGCGAACTCCAGACCTaGGATGCTGGCAAAGATCTC | + |
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Preference number: 4 (lower is better) Translates to: INEKRMGIAGTAVTLSVRSELQT*DAGKDL Trigger: GAGATCTTTGCCAGCATCCCAGGTCTGGAGTTCGCT...CCTGACAGAGAGTGTCACAGCAGTACCAGCTATGCCCATTCTTTTCTCATTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CCA 90 bp | AGAATAAATGAGAAAAGAATGGGCATAGCTGGTACTGCTGTGACACTCTCTGTCAAGATGTTGGGGATATaGAGGTGGAGACCTTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RINEKRMGIAGTAVTLSVKMLGI*RWRPWR Trigger: CCTCCAAGGTCTCCACCTCCATATCCCCAACATCTT...GACAGAGAGTGTCACAGCAGTACCAGCTATGCCCATTCTTTTCTCATTTATTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR TCA 90 bp | CATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTACAGAATAAATATATGGCACCCAGGTTaGTGCTCCAATAGAACCAGT | + |
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Preference number: 4 (lower is better) Translates to: HAPYLWEPLHSTVGYRINIWHPG*CSNRTS Trigger: ACTGGTTCTATTGGAGCATCAACCTGGGTGCCATAT...ATTTATTCTGTACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CCA 90 bp | GCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTACAGAATAAAATCTTCACCAGCACCTaGAAGTTGGCCATATCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ACPLFMGTTSFYCWVQNKIFTST*KLAISS Trigger: AGAAGATATGGCCAACTTCCAGGTGCTGGTGAAGAT...TTTATTCTGTACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CCA 90 bp | GCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTACAGAATAAACTTGGAGGACATAGGTaGACTGCATCTGGAAATATA | + |
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Preference number: 4 (lower is better) Translates to: ACPLFMGTTSFYCWVQNKLGGHR*TASGNI Trigger: TATATTTCCAGATGCAGTCCACCTATGTCCTCCAAG...TTTATTCTGTACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CAA 90 bp | AGAGGGAGGGCGCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGGATGAGGGCAGCAGCTaGCACCGCAGCAGCAGAGGA | + |
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Preference number: 5 (lower is better) Translates to: RGRAHAPYLWEPLHSTVGDEGSS*HRSSRG Trigger: TCCTCTGCTGCTGCGGTGCAAGCTGCTGCCCTCATC...CCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGCGCCCTCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS TCA 90 bp | CCTCCGGCAGGGACAGCAGTTTTGGAACGCAAGCTTCAGCATAGATaGCACTTGGCTGCCTGTTGGGGGCTTGGTGATGAAGACTGGTGT | + |
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Preference number: 5 (lower is better) Translates to: PPAGTAVLERKLQHR*HLAACWGLGDEDWC Trigger: ACACCAGTCTTCATCACCAAGCCCCCAACAGGCAGCCAAGTGTCATCTATGCTGAAGCTTGCGTTCCAAAACTGCTGTCCCTGCCGGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS TCA 90 bp | GAGTCCTCTCATAGCGACCAGCAATCCAGAGAAACAGGACGGCTGTaGCAGCCTCAATGCCGGCCAGCAGGAAGAAGTAACGGTCCATCT | + |
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Preference number: 5 (lower is better) Translates to: ESSHSDQQSRETGRL*QPQCRPAGRSNGPS Trigger: AGATGGACCGTTACTTCTTCCTGCTGGCCGGCATTGAGGCTGTCACAGCCGTCCTGTTTCTCTGGATTGCTGGTCGCTATGAGAGGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CCA 90 bp | CTTTCAGAGTCCCTGGAAGAGGACCTCCGGCAGGGACAGCAGTTTTaGAACGCAAGCTTCAGCATAGATGACACTTGGCTGCCTGTTGGG | + |
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Preference number: 5 (lower is better) Translates to: LSESLEEDLRQGQQF*NASFSIDDTWLPVG Trigger: CCCAACAGGCAGCCAAGTGTCATCTATGCTGAAGCTTGCGTTCCAAAACTGCTGTCCCTGCCGGAGGTCCTCTTCCAGGGACTCTGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CCA 90 bp | AGGCAGGATCTTCACCAGCACCTGGAAGTTGGCCATATCTTCTTGTaGAGAAGGTCCAGGCTGGTTAGACCTCTGGTCAGGCAACAGGTG | + |
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Preference number: 5 (lower is better) Translates to: RQDLHQHLEVGHIFL*RRSRLVRPLVRQQV Trigger: CACCTGTTGCCTGACCAGAGGTCTAACCAGCCTGGACCTTCTCCACAAGAAGATATGGCCAACTTCCAGGTGCTGGTGAAGATCCTGCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS TCA 90 bp | GCAGCAGCTTGCACCGCAGCAGCAGAGGATCAATCAAGTGATCCTTaGCAGGGATCAGAATCAGGATCACCGCAACATTGGCCAGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: AAACTAAAEDQSSDP*QGSESGSPQHWPVG Trigger: TCCTACTGGCCAATGTTGCGGTGATCCTGATTCTGATCCCTGTCAAGGATCACTTGATTGATCCTCTGCTGCTGCGGTGCAAGCTGCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CCA 90 bp | CAGGGACAGCAGTTTTGGAACGCAAGCTTCAGCATAGATGACACTTaGCTGCCTGTTGGGGGCTTGGTGATGAAGACTGGTGTGGCAAAG | + |
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Preference number: 5 (lower is better) Translates to: QGQQFWNASFSIDDT*LPVGGLVMKTGVAK Trigger: CTTTGCCACACCAGTCTTCATCACCAAGCCCCCAACAGGCAGCCAAGTGTCATCTATGCTGAAGCTTGCGTTCCAAAACTGCTGTCCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CAA 90 bp | GGGAGGGCGCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTACGCAGGGACAGCAGTTTaGGAACGCAAGCTTCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: GRAHAPYLWEPLHSTVGYAGTAV*ERKLQH Trigger: ATGCTGAAGCTTGCGTTCCAAAACTGCTGTCCCTGC...GTACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGCGCCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CAA 90 bp | GGGAGGGCGCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTACGTTGGCCATATCTTCTaGTGGAGAAGGTCCAGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GRAHAPYLWEPLHSTVGYVGHIF*WRRSRL Trigger: CAGCCTGGACCTTCTCCACAAGAAGATATGGCCAAC...GTACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGCGCCCTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CAA 90 bp | GGAGGGCGCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTACAATGGAGGTGGAGACCTaGGAGGACATAGGTGGACTG | + |
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Preference number: 5 (lower is better) Translates to: GGRMPLIYGNHFILLLGTMEVET*EDIGGL Trigger: CAGTCCACCTATGTCCTCCAAGGTCTCCACCTCCAT...TGTACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGCGCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CCA 90 bp | CTGCATAGTATAAGTCCTTCCCAATCAGCTGAGGCACTGTCTGGTTaGCAGCAATGTACTGTAAGCGTTCTTTCTCCAGGACTCCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: LHSISPSQSAEALSG*QQCTVSVLSPGLLP Trigger: TGGCAGGAGTCCTGGAGAAAGAACGCTTACAGTACATTGCTGCCAACCAGACAGTGCCTCAGCTGATTGGGAAGGACTTATACTATGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CAA 90 bp | ATAAATGAGAAAAGAATGGGCATAGCTGGTACTGCTGTGACACTCTCTGTCAGGCTGCCTGTTGGGGGCTaGGTGATGAAGACTGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: INEKRMGIAGTAVTLSVRLPVGG*VMKTGV Trigger: CACACCAGTCTTCATCACCAAGCCCCCAACAGGCAG...CCTGACAGAGAGTGTCACAGCAGTACCAGCTATGCCCATTCTTTTCTCATTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CAA 90 bp | AGAGGGAGGGCGCATGCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGAAAGAGATGTTAGGGTaGGTCCTGAAGATGTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: RGRAHAPYLWEPLHSTVGKEMLG*VLKMLG Trigger: CCCCAACATCTTCAGGACCAACCCTAACATCTCTTT...CCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGCATGCGCCCTCCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CAA 90 bp | GCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTACAGAATAAATGAGAGGAGCCTTGGCAGCTaGAGGATGGGCAGGCAGGTT | + |
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Preference number: 5 (lower is better) Translates to: APYLWEPLHSTVGYRINERSLGS*RMGRQV Trigger: AACCTGCCTGCCCATCCTCAAGCTGCCAAGGCTCCT...CTCATTTATTCTGTACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CAA 90 bp | AGAATAAATGAGAAAAGAATGGGCATAGCTGGTACTGCTGTGACACTCTCTGTCAGGATCACCGCAACATaGGCCAGTAGGAGCCAGGCT | + |
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Preference number: 5 (lower is better) Translates to: RINEKRMGIAGTAVTLSVRITAT*ASRSQA Trigger: AGCCTGGCTCCTACTGGCCAATGTTGCGGTGATCCT...GACAGAGAGTGTCACAGCAGTACCAGCTATGCCCATTCTTTTCTCATTTATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CAA 90 bp | ATAAATGAGAAAAGAATGGGCATAGCTGGTACTGCTGTGACACTCTCTGTCAGGTTGGTCCTGAAGATGTaGGGGATATGGAGGTGGAGA | + |
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Preference number: 5 (lower is better) Translates to: INEKRMGIAGTAVTLSVRLVLKM*GIWRWR Trigger: TCTCCACCTCCATATCCCCAACATCTTCAGGACCAA...CCTGACAGAGAGTGTCACAGCAGTACCAGCTATGCCCATTCTTTTCTCATTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS-3UTR CAA 90 bp | GCCCCTTATTTATGGGAACCACTTCATTCTACTGTTGGGTACAGAATAAATGAGACCAGCACCTGGAAGTaGGCCATATCTTCTTGTGGA | + |
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Preference number: 5 (lower is better) Translates to: APYLWEPLHSTVGYRINETSTWK*AISSCG Trigger: TCCACAAGAAGATATGGCCAACTTCCAGGTGCTGGT...CTCATTTATTCTGTACCCAACAGTAGAATGAAGTGGTTCCCATAAATAAGGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CAA 72 bp | CCGTCGTGGTCCCCGCGGGCCTCGGGCCACCAGCGGTaGTCGCTCTCCGGACCTGCTTGGTTGCTCTTCCGC | + |
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Preference number: 6 (lower is better) Translates to: PSWSPRASGHQR*SLSGPAWLLFR Trigger: GCGGAAGAGCAACCAAGCAGGTCCGGAGAGCGACAACCGCTGGTGGCCCGAGGCCCGCGGGGACCACGACGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CCA 72 bp | AAGCGGCGGGTGGCATCGCGCCCGAGATCCATCACCTaGTCAGCCCCGAACGAGGTGAGGGTGCTCCTGACG | + |
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Preference number: 6 (lower is better) Translates to: KRRVASRPRSIT*SAPNEVRVLLT Trigger: CGTCAGGAGCACCCTCACCTCGTTCGGGGCTGACCAGGTGATGGATCTCGGGCGCGATGCCACCCGCCGCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CCA 72 bp | CAGCCAGGGCCAGGAGCAGCAACACCAAGTAGAGGGTaGTCGCGCAGTAGGGGCTGGACCAGGAGCCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: QPGPGAATPSRG*SRSRGWTRSLG Trigger: GCCAAGGCTCCTGGTCCAGCCCCTACTGCGCGACCACCCTCTACTTGGTGTTGCTGCTCCTGGCCCTGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CCA 72 bp | TTAGCCTCTGACCCTGCTGGACGAGCGCTGGGAGGCTaGGTCCTGGCGAGTCCTCTCATAGCGACCAGCAAT | + |
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Preference number: 6 (lower is better) Translates to: LASDPAGRALGG*VLASPLIATSN Trigger: ATTGCTGGTCGCTATGAGAGGACTCGCCAGGACCCAGCCTCCCAGCGCTCGTCCAGCAGGGTCAGAGGCTAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS GCA 72 bp | GAGGTGACACCAAAGAAGGCAGCGCGTTCCAGCATCTaGACTAGCAGCACCGCAGCAGCAGCTGTCCGTCTC | + |
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Preference number: 6 (lower is better) Translates to: EVTPKKAARSSI*TSSTAAAAVRL Trigger: GAGACGGACAGCTGCTGCTGCGGTGCTGCTAGTGCAGATGCTGGAACGCGCTGCCTTCTTTGGTGTCACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CCA 72 bp | GGTCCAGGCTGGTTAGACCTCTGGTCAGGCAACAGGTaGGCACTTTCAGAGTCCCTGGAAGAGGACCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: GPGWLDLWSGNR*ALSESLEEDLR Trigger: CCGGAGGTCCTCTTCCAGGGACTCTGAAAGTGCCCACCTGTTGCCTGACCAGAGGTCTAACCAGCCTGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CCA 72 bp | TCTGGTCAGGCAACAGGTGGGCACTTTCAGAGTCCCTaGAAGAGGACCTCCGGCAGGGACAGCAGTTTTGGA | + |
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Preference number: 6 (lower is better) Translates to: SGQATGGHFQSP*KRTSGRDSSFG Trigger: TCCAAAACTGCTGTCCCTGCCGGAGGTCCTCTTCCAGGGACTCTGAAAGTGCCCACCTGTTGCCTGACCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CAA 72 bp | TCGGGCATCTCTCCACAGAAGGATCTGCGGCCATCATaGGTGATGGTGGTGAGCAACAAGCCAGAGGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SGISPQKDLRPS*VMVVSNKPEAA Trigger: GGCTGCCTCTGGCTTGTTGCTCACCACCATCACCAATGATGGCCGCAGATCCTTCTGTGGAGAGATGCCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS TCA 72 bp | GCCCATAATTGCACCCTGCATGGAGCGTGGGGCTTCTaGGTAAGCGAACTCCAGACCTGGGATGCTGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: AHNCTLHGAWGF*VSELQTWDAGK Trigger: TTTGCCAGCATCCCAGGTCTGGAGTTCGCTTACTCAGAAGCCCCACGCTCCATGCAGGGTGCAATTATGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS TCA 72 bp | CATAGCGACCAGCAATCCAGAGAAACAGGACGGCTGTaGCAGCCTCAATGCCGGCCAGCAGGAAGAAGTAAC | + |
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Preference number: 6 (lower is better) Translates to: HSDQQSRETGRL*QPQCRPAGRSN Trigger: GTTACTTCTTCCTGCTGGCCGGCATTGAGGCTGTCACAGCCGTCCTGTTTCTCTGGATTGCTGGTCGCTATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS GCA 72 bp | CCAGGGCCATTTTCTGCAGAGATGAGGGCAGCAGCTTaGACCGCAGCAGCAGAGGATCAATCAAGTGATCCT | + |
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Preference number: 6 (lower is better) Translates to: PGPFSAEMRAAA*TAAAEDQSSDP Trigger: AGGATCACTTGATTGATCCTCTGCTGCTGCGGTGCAAGCTGCTGCCCTCATCTCTGCAGAAAATGGCCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CAA 90 bp | CACAGGCAGGATCTTCACCAGCACCTGGAAGTTGGCCATATCTTCTaGTGGAGAAGGTCCAGGCTGGTTAGACCTCTGGTCAGGCAACAG | + |
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Preference number: 6 (lower is better) Translates to: HRQDLHQHLEVGHIF*WRRSRLVRPLVRQQ Trigger: CTGTTGCCTGACCAGAGGTCTAACCAGCCTGGACCTTCTCCACAAGAAGATATGGCCAACTTCCAGGTGCTGGTGAAGATCCTGCCTGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CCA 72 bp | CTTCACCAGCACCTGGAAGTTGGCCATATCTTCTTGTaGAGAAGGTCCAGGCTGGTTAGACCTCTGGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LHQHLEVGHIFL*RRSRLVRPLVR Trigger: CCTGACCAGAGGTCTAACCAGCCTGGACCTTCTCCACAAGAAGATATGGCCAACTTCCAGGTGCTGGTGAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CCA 72 bp | CCATCACAGGCAGGATCTTCACCAGCACCTGGAAGTTaGCCATATCTTCTTGTGGAGAAGGTCCAGGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: PSQAGSSPAPGS*PYLLVEKVQAG Trigger: ACCAGCCTGGACCTTCTCCACAAGAAGATATGGCCAACTTCCAGGTGCTGGTGAAGATCCTGCCTGTGATGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CAA 72 bp | ACCATCACAGGCAGGATCTTCACCAGCACCTGGAAGTaGGCCATATCTTCTTGTGGAGAAGGTCCAGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: TITGRIFTSTWK*AISSCGEGPGW Trigger: CCAGCCTGGACCTTCTCCACAAGAAGATATGGCCAACTTCCAGGTGCTGGTGAAGATCCTGCCTGTGATGGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CAA 90 bp | ACAAGGGTCACCATCACAGGCAGGATCTTCACCAGCACCTGGAAGTaGGCCATATCTTCTTGTGGAGAAGGTCCAGGCTGGTTAGACCTC | + |
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Preference number: 6 (lower is better) Translates to: TRVTITGRIFTSTWK*AISSCGEGPGWLDL Trigger: GAGGTCTAACCAGCCTGGACCTTCTCCACAAGAAGATATGGCCAACTTCCAGGTGCTGGTGAAGATCCTGCCTGTGATGGTGACCCTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS TCA 72 bp | GGGACAGCAGTTTTGGAACGCAAGCTTCAGCATAGATaGCACTTGGCTGCCTGTTGGGGGCTTGGTGATGAA | + |
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Preference number: 6 (lower is better) Translates to: GTAVLERKLQHR*HLAACWGLGDE Trigger: TTCATCACCAAGCCCCCAACAGGCAGCCAAGTGTCATCTATGCTGAAGCTTGCGTTCCAAAACTGCTGTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS TCA 72 bp | AGCAGCTTGCACCGCAGCAGCAGAGGATCAATCAAGTaGTCCTTGACAGGGATCAGAATCAGGATCACCGCA | + |
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Preference number: 6 (lower is better) Translates to: SSLHRSSRGSIK*SLTGIRIRITA Trigger: TGCGGTGATCCTGATTCTGATCCCTGTCAAGGATCACTTGATTGATCCTCTGCTGCTGCGGTGCAAGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CCA 72 bp | AAGTTGGCCATATCTTCTTGTGGAGAAGGTCCAGGCTaGTTAGACCTCTGGTCAGGCAACAGGTGGGCACTT | + |
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Preference number: 6 (lower is better) Translates to: KLAISSCGEGPG*LDLWSGNRWAL Trigger: AAGTGCCCACCTGTTGCCTGACCAGAGGTCTAACCAGCCTGGACCTTCTCCACAAGAAGATATGGCCAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CCA 72 bp | AGGGTCACCATCACAGGCAGGATCTTCACCAGCACCTaGAAGTTGGCCATATCTTCTTGTGGAGAAGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: RVTITGRIFTST*KLAISSCGEGP Trigger: TGGACCTTCTCCACAAGAAGATATGGCCAACTTCCAGGTGCTGGTGAAGATCCTGCCTGTGATGGTGACCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CAA 72 bp | GATCTTCACCAGCACCTGGAAGTTGGCCATATCTTCTaGTGGAGAAGGTCCAGGCTGGTTAGACCTCTGGTC | + |
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Preference number: 6 (lower is better) Translates to: DLHQHLEVGHIF*WRRSRLVRPLV Trigger: GACCAGAGGTCTAACCAGCCTGGACCTTCTCCACAAGAAGATATGGCCAACTTCCAGGTGCTGGTGAAGATC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS TCA 72 bp | TGCACCGCAGCAGCAGAGGATCAATCAAGTGATCCTTaGCAGGGATCAGAATCAGGATCACCGCAACATTGG | + |
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Preference number: 6 (lower is better) Translates to: CTAAAEDQSSDP*QGSESGSPQHW Trigger: CCAATGTTGCGGTGATCCTGATTCTGATCCCTGTCAAGGATCACTTGATTGATCCTCTGCTGCTGCGGTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CCA 72 bp | CAGTTTTGGAACGCAAGCTTCAGCATAGATGACACTTaGCTGCCTGTTGGGGGCTTGGTGATGAAGACTGGT | + |
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Preference number: 6 (lower is better) Translates to: QFWNASFSIDDT*LPVGGLVMKTG Trigger: ACCAGTCTTCATCACCAAGCCCCCAACAGGCAGCCAAGTGTCATCTATGCTGAAGCTTGCGTTCCAAAACTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CAA 90 bp | AACGCAAGCTTCAGCATAGATGACACTTGGCTGCCTGTTGGGGGCTaGGTGATGAAGACTGGTGTGGCAAAGAGAAAAATGAAGAATGCC | + |
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Preference number: 6 (lower is better) Translates to: NASFSIDDTWLPVGG*VMKTGVAKRKMKNA Trigger: GGCATTCTTCATTTTTCTCTTTGCCACACCAGTCTTCATCACCAAGCCCCCAACAGGCAGCCAAGTGTCATCTATGCTGAAGCTTGCGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS TCA 72 bp | GAGCCAGGCTTCTGGGATCCTGTAGTTACTGCTATCTaGTCTCAGCAACAAAGAGATGTTAGGGTTGGTCCT | + |
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Preference number: 6 (lower is better) Translates to: EPGFWDPVVTAI*SQQQRDVRVGP Trigger: AGGACCAACCCTAACATCTCTTTGTTGCTGAGATCAGATAGCAGTAACTACAGGATCCCAGAAGCCTGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CCA 72 bp | TGGGGATATGGAGGTGGAGACCTTGGAGGACATAGGTaGACTGCATCTGGAAATATACCATCCAATAAGGCA | + |
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Preference number: 6 (lower is better) Translates to: WGYGGGDLGGHR*TASGNIPSNKA Trigger: TGCCTTATTGGATGGTATATTTCCAGATGCAGTCCACCTATGTCCTCCAAGGTCTCCACCTCCATATCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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| CDS CAA 90 bp | GTTAGGGTTGGTCCTGAAGATGTTGGGGATATGGAGGTGGAGACCTaGGAGGACATAGGTGGACTGCATCTGGAAATATACCATCCAATA | + |
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Preference number: 6 (lower is better) Translates to: VRVGPEDVGDMEVET*EDIGGLHLEIYHPI Trigger: TATTGGATGGTATATTTCCAGATGCAGTCCACCTATGTCCTCCAAGGTCTCCACCTCCATATCCCCAACATCTTCAGGACCAACCCTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025646.3 |
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