Pregenerated sensors for SLC15A2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022899Ensembl transcript IDs: ENSMUST00000023616.11, ENSMUST00000164579.9, ENSMUST00000165380.8, ENSMUST00000165531.9, ENSMUST00000168279.2
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGCCACTGAACTGTGCCACGATCAGCACAATAATATTCCCAACTaGAACGGTCAACAGCCAGGCTGCCTGGAGCACAGATTTCATGCT | + |
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Preference number: 1 (lower is better) Translates to: QATELCHDQHNNIPN*NGQQPGCLEHRFHA Trigger: AGCATGAAATCTGTGCTCCAGGCAGCCTGGCTGTTGACCGTTGCAGTTGGGAATATTATTGTGCTGATCGTGGCACAGTTCAGTGGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR GCA 90 bp | AGGGATCAACGGCTGTTCACATCCTTTTCCACTCCACTCACCAAGTaGCAGCACCATGAGCAATCCTGGAATCCCAAAAGCCAATGCATA | + |
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Preference number: 1 (lower is better) Translates to: RDQRLFTSFSTPLTK*QHHEQSWNPKSQCI Trigger: TATGCATTGGCTTTTGGGATTCCAGGATTGCTCATGGTGCTGGCACTTGGTGAGTGGAGTGGAAAAGGATGTGAACAGCCGTTGATCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168279.2 |
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| 3UTR GCA 90 bp | AAAGAGCTGATGGACTCCACCAAGAGAGGATTATTTCTGTTTCCCTaGACTGTCACCTCTATTTCACCATCTGCCAAGTTCAGGACTTGC | + |
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Preference number: 1 (lower is better) Translates to: KELMDSTKRGLFLFP*TVTSISPSAKFRTC Trigger: GCAAGTCCTGAACTTGGCAGATGGTGAAATAGAGGTGACAGTGCAGGGAAACAGAAATAATCCTCTCTTGGTGGAGTCCATCAGCTCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR GCA 90 bp | GAAAACATGACCTCTGCTGCTGTAACCAGGACATACTGTGGTAGCTaGCATGCAATGGATAGTTTATTGGCTGGAATGTCTTCTGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: ENMTSAAVTRTYCGS*HAMDSLLAGMSSAF Trigger: GAAGGCAGAAGACATTCCAGCCAATAAACTATCCATTGCATGGCAGCTACCACAGTATGTCCTGGTTACAGCAGCAGAGGTCATGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR GCA 90 bp | CATAATTTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTTaGCTGATAGGGTTAGTGGAAAGGGTGCATGGAAGAGTAGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: HNLSSNPKGNHCNEA*LIGLVERVHGRVES Trigger: GGACTCTACTCTTCCATGCACCCTTTCCACTAACCCTATCAGGCAAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAAATTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
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| 3UTR GCA 90 bp | CTGACCACCATTCATAATTTATCTTCAAACCCAAAGGGAAACCACTaGAATGAGGCTTGCCTGATAGGGTTAGTGGAAAGGGTGCATGGA | + |
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Preference number: 1 (lower is better) Translates to: LTTIHNLSSNPKGNH*NEACLIGLVERVHG Trigger: TCCATGCACCCTTTCCACTAACCCTATCAGGCAAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAAATTATGAATGGTGGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
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| 3UTR TCA 90 bp | CCCGGAACAAGAGAGTTCTTTAGAGGGGCGTGCAGTACAAGAGAATaGATAGTTTATATGCATTCCTGTGTCCCCATGACTTTCCTTACT | + |
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Preference number: 1 (lower is better) Translates to: PGTREFFRGACSTRE*IVYMHSCVPMTFLT Trigger: AGTAAGGAAAGTCATGGGGACACAGGAATGCATATAAACTATTCATTCTCTTGTACTGCACGCCCCTCTAAAGAACTCTCTTGTTCCGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| 3UTR TCA 90 bp | TTTGCACAGTTCTGTACTCAGACACTCCATAGTCTTTGCCCACGCTaGGAGGAGCATTGGCATCCAAGGAAATATTCATGTCTTTATGCA | + |
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Preference number: 1 (lower is better) Translates to: FAQFCTQTLHSLCPR*EEHWHPRKYSCLYA Trigger: TGCATAAAGACATGAATATTTCCTTGGATGCCAATGCTCCTCTCAGCGTGGGCAAAGACTATGGAGTGTCTGAGTACAGAACTGTGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR TCA 90 bp | TCTGCCAAGTTCAGGACTTGCAGAAAAATCTCTTGGGAAGCTGGCTaGGGATGGATCATTCCATTTATTTTTATCTCTACAAGCGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: SAKFRTCRKISWEAG*GWIIPFIFISTSAA Trigger: TGCAGCGCTTGTAGAGATAAAAATAAATGGAATGATCCATCCTCAGCCAGCTTCCCAAGAGATTTTTCTGCAAGTCCTGAACTTGGCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR TCA 90 bp | AGCCTTGTATTCTTGGTTTCTAGGTTGATCATATTCCCCTGGATGTaGGGAATCTGCTTTTCTGTTGCCTCATGGATACCCTCTGACTTT | + |
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Preference number: 1 (lower is better) Translates to: SLVFLVSRLIIFPWM*GICFSVASWIPSDF Trigger: AAAGTCAGAGGGTATCCATGAGGCAACAGAAAAGCAGATTCCTCACATCCAGGGGAATATGATCAACCTAGAAACCAAGAATACAAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR GCA 90 bp | ACGCTGAGAGGAGCATTGGCATCCAAGGAAATATTCATGTCTTTATaGAAAGTGTTAATAAACCTGATGGCTGTCATCCCATTGGCTGGT | + |
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Preference number: 1 (lower is better) Translates to: TLRGALASKEIFMSL*KVLINLMAVIPLAG Trigger: ACCAGCCAATGGGATGACAGCCATCAGGTTTATTAACACTTTGCATAAAGACATGAATATTTCCTTGGATGCCAATGCTCCTCTCAGCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR CCA 90 bp | ACCATCTGCCAAGTTCAGGACTTGCAGAAAAATCTCTTGGGAAGCTaGCTGAGGATGGATCATTCCATTTATTTTTATCTCTACAAGCGC | + |
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Preference number: 1 (lower is better) Translates to: TICQVQDLQKNLLGS*LRMDHSIYFYLYKR Trigger: GCGCTTGTAGAGATAAAAATAAATGGAATGATCCATCCTCAGCCAGCTTCCCAAGAGATTTTTCTGCAAGTCCTGAACTTGGCAGATGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR TCA 90 bp | GGTTCCAAATACCTGATAAAGGAGTCCTCCAAACTTAGCATGCCATaGGACTTATCTCTACTACACATTTGTACTTTCCTGGGCATTTGG | + |
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Preference number: 1 (lower is better) Translates to: GSKYLIKESSKLSMP*DLSLLHICTFLGIW Trigger: CCAAATGCCCAGGAAAGTACAAATGTGTAGTAGAGATAAGTCTCATGGCATGCTAAGTTTGGAGGACTCCTTTATCAGGTATTTGGAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| 3UTR-3UTR CCA 90 bp | GAAAGGGTGCATGGAAGAGTAGAGTCCCTGCATGATGCCTTCTATGTGGCAGGGAGTGGAAAGGGTGCATaGAAGAGTAGAGTCCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: ERVHGRVESLHDAFYVAGSGKGA*KSRVPA Trigger: TGCAGGGACTCTACTCTTCCATGCACCCTTTCCACT...CCCTGCCACATAGAAGGCATCATGCAGGGACTCTACTCTTCCATGCACCCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168279.2 |
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| 3UTR-3UTR TCA 90 bp | ATATTCCCAACTGCAACGGTCAACAGCCAGGCTGCCTGGAGCACAGATTTCATGTCTTGGGAAGCTGGCTaGGGATGGATCATTCCATTT | + |
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Preference number: 2 (lower is better) Translates to: IFPTATVNSQAAWSTDFMSWEAG*GWIIPF Trigger: AAATGGAATGATCCATCCTCAGCCAGCTTCCCAAGA...CATGAAATCTGTGCTCCAGGCAGCCTGGCTGTTGACCGTTGCAGTTGGGAATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR-3UTR CCA 90 bp | AGTTGGGACAGGTTCTTAGCAGTTGTCTGGGGAAAGGAGATAGTGTTGCGACCTACTTTCCTGGGCATTTaGAGATACTGGGCCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: SWDRFLAVVWGKEIVLRPTFLGI*RYWASL Trigger: CAAGCTGGCCCAGTATCTCCAAATGCCCAGGAAAGT...AGGTCGCAACACTATCTCCTTTCCCCAGACAACTGCTAAGAACCTGTCCCAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| 3UTR CAA 90 bp | TCCCTGCACTGTCACCTCTATTTCACCATCTGCCAAGTTCAGGACTaGCAGAAAAATCTCTTGGGAAGCTGGCTGAGGATGGATCATTCC | + |
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Preference number: 2 (lower is better) Translates to: SLHCHLYFTICQVQD*QKNLLGSWLRMDHS Trigger: GGAATGATCCATCCTCAGCCAGCTTCCCAAGAGATTTTTCTGCAAGTCCTGAACTTGGCAGATGGTGAAATAGAGGTGACAGTGCAGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCCAACTGCAACGGTCAACAGCCAGGCTGCCTGGAGCACAGATTTCATGCTAGTACCAAAGTCTAGTTaGCCTAAATTGAGAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: FPTATVNSQAAWSTDFMLVPKSS*PKLREK Trigger: CTTTTCTCTCAATTTAGGTCAACTAGACTTTGGTAC...TAGCATGAAATCTGTGCTCCAGGCAGCCTGGCTGTTGACCGTTGCAGTTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR-3UTR TCA 90 bp | TATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCATACAGGGCTGTCCCAGCAACACTaGAAAGGCTGGGTTGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: YRRKPCSKRNRNEVFHTGLSQQH*KGWVAK Trigger: CTTTGCAACCCAGCCTTTTCAGTGTTGCTGGGACAG...CCCTGTATGAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| 3UTR CAA 90 bp | TGCAAAGTGTTAATAAACCTGATGGCTGTCATCCCATTGGCTGGTTaGATTCCTGTGTCCTTTACCAGCATACTGGAGAGACTTTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: CKVLINLMAVIPLAG*IPVSFTSILERLSP Trigger: TGGAGAAAGTCTCTCCAGTATGCTGGTAAAGGACACAGGAATCAAACCAGCCAATGGGATGACAGCCATCAGGTTTATTAACACTTTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR-3UTR CCA 90 bp | CACCTGCTCCACCCACCCCCACAGATTTTAATAAGTTTCTCATGCAGGTCCTTGTATTGTGGTAGAAAATaGAGGCAATCCACTCAGATA | + |
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Preference number: 2 (lower is better) Translates to: HLLHPPPQILISFSCRSLYCGRK*RQSTQI Trigger: TATCTGAGTGGATTGCCTCCATTTTCTACCACAATA...CAAGGACCTGCATGAGAAACTTATTAAAATCTGTGGGGGTGGGTGGAGCAGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| 3UTR-3UTR GCA 90 bp | CACCTGCTCCACCCACCCCCACAGATTTTAATAAGTTTCTCATGCAGGTCCTTGCAGCTTGAGAGACATTaGCTAATATTTACTGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: HLLHPPPQILISFSCRSLQLERH*LIFTEF Trigger: AAACTCAGTAAATATTAGGCAATGTCTCTCAAGCTG...CAAGGACCTGCATGAGAAACTTATTAAAATCTGTGGGGGTGGGTGGAGCAGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| 3UTR-3UTR GCA 90 bp | AGAGACTTTCTCCATTCTCATGAACCACCAACTGGTAACAGTTCTTCTCCTCTACTCTATTTCACCATCTaGCAAGTTCAGGACTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: RDFLHSHEPPTGNSSSPLLYFTI*QVQDLQ Trigger: CTGCAAGTCCTGAACTTGGCAGATGGTGAAATAGAG...TAGAGGAGAAGAACTGTTACCAGTTGGTGGTTCATGAGAATGGAGAAAGTCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR-3UTR CCA 90 bp | TATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCATACAGGGGGCATTTGGAGATACTaGGCCAGCTTGAGAGACATT | + |
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Preference number: 2 (lower is better) Translates to: YRRKPCSKRNRNEVFHTGGIWRY*ASLRDI Trigger: AATGTCTCTCAAGCTGGCCCAGTATCTCCAAATGCC...CCCTGTATGAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| 3UTR-3UTR TCA 90 bp | TTAGCATGCCATGAGACTTATCTCTACTACACATTTGTACTTTCCTGGGCATTTGATACTGGGCCAGCTTaGGAGACATTGCCTAATATT | + |
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Preference number: 2 (lower is better) Translates to: LACHETYLYYTFVLSWAFDTGPA*ETLPNI Trigger: AATATTAGGCAATGTCTCTCAAGCTGGCCCAGTATC...AAATGCCCAGGAAAGTACAAATGTGTAGTAGAGATAAGTCTCATGGCATGCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| 3UTR-3UTR TCA 90 bp | AACATGGCTATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCATTCCTGTGTCCCCATaGCTTTCCTTACTGTCTTTA | + |
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Preference number: 2 (lower is better) Translates to: NMAIDGNRVVKGTEMRSFIPVSP*LSLLSL Trigger: TAAAGACAGTAAGGAAAGTCATGGGGACACAGGAAT...GAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATAGCCATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| 3UTR-3UTR GCA 90 bp | AACAGTTCTTCTCCTCTACAGAGTACTCATTGTGGACAGACAAGTTGTTGTACTGCCAAGTTCAGGACTTaGAGAAAAATCTCTTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: NSSSPLQSTHCGQTSCCTAKFRT*RKISWE Trigger: TTCCCAAGAGATTTTTCTGCAAGTCCTGAACTTGGC...AGTACAACAACTTGTCTGTCCACAATGAGTACTCTGTAGAGGAGAAGAACTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR-3UTR GCA 90 bp | AATGCACTGCAGGATACTTTCCTCTTTGCACAGTTCTGTACTCAGACACTCCATTTATTTCTGTTTCCCTaGACTGTCACCTCTATTTCA | + |
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Preference number: 2 (lower is better) Translates to: NALQDTFLFAQFCTQTLHLFLFP*TVTSIS Trigger: TGAAATAGAGGTGACAGTGCAGGGAAACAGAAATAA...ATGGAGTGTCTGAGTACAGAACTGTGCAAAGAGGAAAGTATCCTGCAGTGCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR-3UTR GCA 90 bp | CCACCATTCATAATTTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTTAATCCCAAAAGCCAATaGATAGCAGTCTTCGCCAAA | + |
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Preference number: 2 (lower is better) Translates to: PPFIIYLQTQRETTAMRLNPKSQ*IAVFAK Trigger: TTTGGCGAAGACTGCTATGCATTGGCTTTTGGGATT...AAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAAATTATGAATGGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168279.2 |
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| 3UTR-3UTR CCA 90 bp | TATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCATACAGGGACATTTGTACTTTCCTaGGCATTTGGAGATACTGGG | + |
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Preference number: 2 (lower is better) Translates to: YRRKPCSKRNRNEVFHTGTFVLS*AFGDTG Trigger: CCCAGTATCTCCAAATGCCCAGGAAAGTACAAATGT...CCCTGTATGAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| 3UTR-3UTR GCA 90 bp | TATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCATACAGGGCTGAAAAGGCTGGGTTaGAAAGCTATAGTTAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: YRRKPCSKRNRNEVFHTGLKRLG*KAIVSF Trigger: GAAACTAACTATAGCTTTGCAACCCAGCCTTTTCAG...CCCTGTATGAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| 3UTR CAA 90 bp | TTACTGAGTTTATCAATAGCCTGTAGGACACGGAGTCTTGGATCCTaGTTTAAAGATATACCTGAAAACCTTGTCCTAAAATTGCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: LLSLSIACRTRSLGS*FKDIPENLVLKLPL Trigger: TAGAGGCAATTTTAGGACAAGGTTTTCAGGTATATCTTTAAACAAGGATCCAAGACTCCGTGTCCTACAGGCTATTGATAAACTCAGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| 3UTR TCA 72 bp | TACCCTCTGACTTTAGAGGAACATAGTAGTAGCCCATaGCGGAGAAGATCAGGCAGACCACCAGCAGGAGGC | + |
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Preference number: 3 (lower is better) Translates to: YPLTLEEHSSSP*RRRSGRPPAGG Trigger: GCCTCCTGCTGGTGGTCTGCCTGATCTTCTCCGTCATGGGCTACTACTATGTTCCTCTAAAGTCAGAGGGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR TCA 72 bp | AGTGGAAAGGGTGCATGGAAGAGTAGAGTCCCTGCATaGTGCCTTCTATGTGGCAGGGATCAACGGCTGTTC | + |
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Preference number: 3 (lower is better) Translates to: SGKGAWKSRVPA*CLLCGRDQRLF Trigger: GAACAGCCGTTGATCCCTGCCACATAGAAGGCATCATGCAGGGACTCTACTCTTCCATGCACCCTTTCCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168279.2 |
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| 3UTR GCA 72 bp | GAACTGTGCCACGATCAGCACAATAATATTCCCAACTaGAACGGTCAACAGCCAGGCTGCCTGGAGCACAGA | + |
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Preference number: 3 (lower is better) Translates to: ELCHDQHNNIPN*NGQQPGCLEHR Trigger: TCTGTGCTCCAGGCAGCCTGGCTGTTGACCGTTGCAGTTGGGAATATTATTGTGCTGATCGTGGCACAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR GCA 72 bp | CGGCTGTTCACATCCTTTTCCACTCCACTCACCAAGTaGCAGCACCATGAGCAATCCTGGAATCCCAAAAGC | + |
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Preference number: 3 (lower is better) Translates to: RLFTSFSTPLTK*QHHEQSWNPKS Trigger: GCTTTTGGGATTCCAGGATTGCTCATGGTGCTGGCACTTGGTGAGTGGAGTGGAAAAGGATGTGAACAGCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168279.2 |
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| 3UTR-3UTR CAA 90 bp | AGCACAATAATATTCCCAACTGCAACGGTCAACAGCCAGGCTGCCTGGAGCACATTGCAGAAAAATCTCTaGGGAAGCTGGCTGAGGATG | + |
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Preference number: 3 (lower is better) Translates to: STIIFPTATVNSQAAWSTLQKNL*GSWLRM Trigger: CATCCTCAGCCAGCTTCCCAAGAGATTTTTCTGCAA...TGTGCTCCAGGCAGCCTGGCTGTTGACCGTTGCAGTTGGGAATATTATTGTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR-3UTR CAA 90 bp | AGCACAATAATATTCCCAACTGCAACGGTCAACAGCCAGGCTGCCTGGAGCACAACGCTGAGAGGAGCATaGGCATCCAAGGAAATATTC | + |
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Preference number: 3 (lower is better) Translates to: STIIFPTATVNSQAAWSTTLRGA*ASKEIF Trigger: GAATATTTCCTTGGATGCCAATGCTCCTCTCAGCGT...TGTGCTCCAGGCAGCCTGGCTGTTGACCGTTGCAGTTGGGAATATTATTGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCACAATAATATTCCCAACTGCAACGGTCAACAGCCAGGCTGCCTGGAGCACGCAATGGATAGTTTATaGGCTGGAATGTCTTCTGCC | + |
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Preference number: 3 (lower is better) Translates to: QHNNIPNCNGQQPGCLEHAMDSL*AGMSSA Trigger: GGCAGAAGACATTCCAGCCAATAAACTATCCATTGC...GTGCTCCAGGCAGCCTGGCTGTTGACCGTTGCAGTTGGGAATATTATTGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR GCA 72 bp | TCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTTaGCTGATAGGGTTAGTGGAAAGGGTGCATGGAAGA | + |
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Preference number: 3 (lower is better) Translates to: SSNPKGNHCNEA*LIGLVERVHGR Trigger: TCTTCCATGCACCCTTTCCACTAACCCTATCAGGCAAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
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| 3UTR CCA 72 bp | CATACTGTGGTAGCTGCCATGCAATGGATAGTTTATTaGCTGGAATGTCTTCTGCCTTCCAGGCCTGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: HTVVAAMQWIVY*LECLLPSRPED Trigger: GTCTTCAGGCCTGGAAGGCAGAAGACATTCCAGCCAATAAACTATCCATTGCATGGCAGCTACCACAGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR-3UTR CAA 90 bp | ACAGATGTTCACGGAGGAGCACAGCCCAGGCCCGGAACAAGAGAGTTCTTTAGAATCTCTACTACACATTaGTACTTTCCTGGGCATTTG | + |
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Preference number: 3 (lower is better) Translates to: TDVHGGAQPRPGTREFFRISTTH*YFPGHL Trigger: CAAATGCCCAGGAAAGTACAAATGTGTAGTAGAGAT...TCTAAAGAACTCTCTTGTTCCGGGCCTGGGCTGTGCTCCTCCGTGAACATCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| 3UTR-3UTR CAA 90 bp | ACAGATGTTCACGGAGGAGCACAGCCCAGGCCCGGAACAAGAGAGTTCTTTAGACAGTATTCTGTCATTTaGGCCCTAAACCAACATATC | + |
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Preference number: 3 (lower is better) Translates to: TDVHGGAQPRPGTREFFRQYSVI*ALNQHI Trigger: GATATGTTGGTTTAGGGCCAAAATGACAGAATACTG...TCTAAAGAACTCTCTTGTTCCGGGCCTGGGCTGTGCTCCTCCGTGAACATCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| 3UTR-3UTR CAA 90 bp | ACTGAACTGTGCCACGATCAGCACAATAATATTCCCAACTGCAACGGTCAACAGATGGCTGTCATCCCATaGGCTGGTTTGATTCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: TELCHDQHNNIPNCNGQQMAVIP*AGLIPV Trigger: CACAGGAATCAAACCAGCCAATGGGATGACAGCCAT...CTGTTGACCGTTGCAGTTGGGAATATTATTGTGCTGATCGTGGCACAGTTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCACAATAATATTCCCAACTGCAACGGTCAACAGCCAGGCTGCCTGGAGCACTTGAGAGAAAAGACATaGTCTTCCGTTTCACAATGC | + |
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Preference number: 3 (lower is better) Translates to: QHNNIPNCNGQQPGCLEHLREKT*SSVSQC Trigger: GCATTGTGAAACGGAAGACAATGTCTTTTCTCTCAA...GTGCTCCAGGCAGCCTGGCTGTTGACCGTTGCAGTTGGGAATATTATTGTGCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR-3UTR CAA 90 bp | ATAATATTCCCAACTGCAACGGTCAACAGCCAGGCTGCCTGGAGCACAGATTTCAGGATACTTTCCTCTTaGCACAGTTCTGTACTCAGA | + |
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Preference number: 3 (lower is better) Translates to: IIFPTATVNSQAAWSTDFRILSS*HSSVLR Trigger: TCTGAGTACAGAACTGTGCAAAGAGGAAAGTATCCT...GAAATCTGTGCTCCAGGCAGCCTGGCTGTTGACCGTTGCAGTTGGGAATATTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| 3UTR TCA 72 bp | AGTTTATTGGCTGGAATGTCTTCTGCCTTCCAGGCCTaGAGACCCCGGTTGGTGATATTAGTGATCACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLLAGMSSAFQA*RPRLVILVITN Trigger: GTTTGTGATCACTAATATCACCAACCGGGGTCTTCAGGCCTGGAAGGCAGAAGACATTCCAGCCAATAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
||
| 3UTR GCA 72 bp | ACCTCTGCTGCTGTAACCAGGACATACTGTGGTAGCTaGCATGCAATGGATAGTTTATTGGCTGGAATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: TSAAVTRTYCGS*HAMDSLLAGMS Trigger: AGACATTCCAGCCAATAAACTATCCATTGCATGGCAGCTACCACAGTATGTCCTGGTTACAGCAGCAGAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
||
| 3UTR-3UTR CAA 90 bp | TATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCATACAGGGTACTTTCCTGGGCATTaGGAGATACTGGGCCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: YRRKPCSKRNRNEVFHTGYFPGH*EILGQL Trigger: AAGCTGGCCCAGTATCTCCAAATGCCCAGGAAAGTA...CCCTGTATGAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| 3UTR-3UTR CAA 90 bp | CATTCTCATGAACCACCAACTGGTAACAGTTCTTCTCCTCTACAGAGTACTCATTGCCAAGTTCAGGACTaGCAGAAAAATCTCTTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HSHEPPTGNSSSPLQSTHCQVQD*QKNLLG Trigger: TCCCAAGAGATTTTTCTGCAAGTCCTGAACTTGGCA...ATGAGTACTCTGTAGAGGAGAAGAACTGTTACCAGTTGGTGGTTCATGAGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
||
| 3UTR GCA 72 bp | TACCAAGCTGTCCCAGCAACACTGAAAAGGCTGGGTTaGAAAGCTATAGTTAGTTTCATAGACAGATGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: YQAVPATLKRLG*KAIVSFIDRCS Trigger: TGAACATCTGTCTATGAAACTAACTATAGCTTTGCAACCCAGCCTTTTCAGTGTTGCTGGGACAGCTTGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| 3UTR GCA 72 bp | GAGAGAAAAGACATTGTCTTCCGTTTCACAATGCACTaGAGGATACTTTCCTCTTTGCACAGTTCTGTACTC | + |
|
Preference number: 3 (lower is better) Translates to: ERKDIVFRFTMH*RILSSLHSSVL Trigger: GAGTACAGAACTGTGCAAAGAGGAAAGTATCCTGCAGTGCATTGTGAAACGGAAGACAATGTCTTTTCTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
||
| 3UTR GCA 72 bp | ATTCATAATTTATCTTCAAACCCAAAGGGAAACCACTaGAATGAGGCTTGCCTGATAGGGTTAGTGGAAAGG | + |
|
Preference number: 3 (lower is better) Translates to: IHNLSSNPKGNH*NEACLIGLVER Trigger: CCTTTCCACTAACCCTATCAGGCAAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAAATTATGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| 3UTR TCA 72 bp | TACCTGATAAAGGAGTCCTCCAAACTTAGCATGCCATaGGACTTATCTCTACTACACATTTGTACTTTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: YLIKESSKLSMP*DLSLLHICTFL Trigger: CAGGAAAGTACAAATGTGTAGTAGAGATAAGTCTCATGGCATGCTAAGTTTGGAGGACTCCTTTATCAGGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| 3UTR GCA 72 bp | AAATTGAGAGAAAAGACATTGTCTTCCGTTTCACAATaGACTGCAGGATACTTTCCTCTTTGCACAGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KLREKTLSSVSQ*TAGYFPLCTVL Trigger: CAGAACTGTGCAAAGAGGAAAGTATCCTGCAGTGCATTGTGAAACGGAAGACAATGTCTTTTCTCTCAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
||
| 3UTR TCA 72 bp | ACAAATATGTTGTACCAAAGTCTAGTTGACCTAAATTaGGAGAAAAGACATTGTCTTCCGTTTCACAATGCA | + |
|
Preference number: 3 (lower is better) Translates to: TNMLYQSLVDLN*EKRHCLPFHNA Trigger: TGCATTGTGAAACGGAAGACAATGTCTTTTCTCTCAATTTAGGTCAACTAGACTTTGGTACAACATATTTGT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
||
| 3UTR TCA 72 bp | GTGATCACAAACAAATATGTTGTACCAAAGTCTAGTTaGCCTAAATTGAGAGAAAAGACATTGTCTTCCGTT | + |
|
Preference number: 3 (lower is better) Translates to: VITNKYVVPKSS*PKLREKTLSSV Trigger: AACGGAAGACAATGTCTTTTCTCTCAATTTAGGTCAACTAGACTTTGGTACAACATATTTGTTTGTGATCAC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGATCAACGGCTGTTCACATCCTTTTCCACTCCACTCACCAAGTGCCAGCACTGCCACACAGGGTTTaGTACCTCCTGTTCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGSTAVHILFHSTHQVPALPHRV*YLLFPE Trigger: CTCTGGGAACAGGAGGTATCAAACCCTGTGTGGCAG...TGCTGGCACTTGGTGAGTGGAGTGGAAAAGGATGTGAACAGCCGTTGATCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168279.2 |
||
| CDS-3UTR GCA 90 bp | ACAGATGTTCACGGAGGAGCACAGCCCAGGCCCGGAACAAGAGAGTTCTTTAGAGGCTGGAATGTCTTCTaGCTTCCAGGCCTGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: TDVHGGAQPRPGTREFFRGWNVF*LPGLKT Trigger: GGTCTTCAGGCCTGGAAGGCAGAAGACATTCCAGCC...TCTAAAGAACTCTCTTGTTCCGGGCCTGGGCTGTGCTCCTCCGTGAACATCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR TCA 90 bp | CACCTGCTCCACCCACCCCCACAGATTTTAATAAGTTTCTCATGCAGGTCCTTGCTGCCACACAGGGTTTaGTACCTCCTGTTCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HLLHPPPQILISFSCRSLLPHRV*YLLFPE Trigger: CTCTGGGAACAGGAGGTATCAAACCCTGTGTGGCAG...CAAGGACCTGCATGAGAAACTTATTAAAATCTGTGGGGGTGGGTGGAGCAGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR TCA 90 bp | CTGATAGGGTTAGTGGAAAGGGTGCATGGAAGAGTAGAGTCCCTGCATGATGCCAATAGCAGAGGCTGCTaGAGGCATGGTAGACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LIGLVERVHGRVESLHDANSRGC*RHGRQM Trigger: CATCTGTCTACCATGCCTTCAGCAGCCTCTGCTATT...GGCATCATGCAGGGACTCTACTCTTCCATGCACCCTTTCCACTAACCCTATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR GCA 90 bp | ACAGATGTTCACGGAGGAGCACAGCCCAGGCCCGGAACAAGAGAGTTCTTTAGACAGTATCCTGGTCAGTaGCTTCACGTCCATAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: TDVHGGAQPRPGTREFFRQYPGQ*LHVHNE Trigger: CTCATTATGGACGTGAAGGCACTGACCAGGATACTG...TCTAAAGAACTCTCTTGTTCCGGGCCTGGGCTGTGCTCCTCCGTGAACATCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR GCA 90 bp | AGTTGGGACAGGTTCTTAGCAGTTGTCTGGGGAAAGGAGATAGTGTTGCGACCTGGTCAACAGCCAGGCTaGCTGGAGCACAGATTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SWDRFLAVVWGKEIVLRPGQQPG*LEHRFH Trigger: ATGAAATCTGTGCTCCAGGCAGCCTGGCTGTTGACC...AGGTCGCAACACTATCTCCTTTCCCCAGACAACTGCTAAGAACCTGTCCCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR GCA 90 bp | AATGAGGCTTGCCTGATAGGGTTAGTGGAAAGGGTGCATGGAAGAGTAGAGTCCACTCCACTCACCAAGTaGCAGCACCATGAGCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: NEACLIGLVERVHGRVESTPLTK*QHHEQS Trigger: GGATTGCTCATGGTGCTGGCACTTGGTGAGTGGAGT...GGACTCTACTCTTCCATGCACCCTTTCCACTAACCCTATCAGGCAAGCCTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164579.9 |
||
| CDS-3UTR CCA 90 bp | GCTTGCCTGATAGGGTTAGTGGAAAGGGTGCATGGAAGAGTAGAGTCCCTGCATTGTTCCTCTTCAAACTaGTCTCCGCCAAAAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ACLIGLVERVHGRVESLHCSSSN*SPPKAA Trigger: GGCAGCTTTTGGCGGAGACCAGTTTGAAGAGGAACA...ATGCAGGGACTCTACTCTTCCATGCACCCTTTCCACTAACCCTATCAGGCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR TCA 90 bp | ACAGATGTTCACGGAGGAGCACAGCCCAGGCCCGGAACAAGAGAGTTCTTTAGATTCAGTAGAGACAGGTaGAAAGAGCGTTTCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TDVHGGAQPRPGTREFFRFSRDR*KERFLG Trigger: TCCAAGGAAACGCTCTTTTCACCTGTCTCTACTGAA...TCTAAAGAACTCTCTTGTTCCGGGCCTGGGCTGTGCTCCTCCGTGAACATCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR TCA 90 bp | CACCTGCTCCACCCACCCCCACAGATTTTAATAAGTTTCTCATGCAGGTCCTTGAATAGCAGAGGCTGCTaGAGGCATGGTAGACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: HLLHPPPQILISFSCRSLNSRGC*RHGRQM Trigger: CATCTGTCTACCATGCCTTCAGCAGCCTCTGCTATT...CAAGGACCTGCATGAGAAACTTATTAAAATCTGTGGGGGTGGGTGGAGCAGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR CCA 90 bp | CACCTGCTCCACCCACCCCCACAGATTTTAATAAGTTTCTCATGCAGGTCCTTGTGTTCCTCTTCAAACTaGTCTCCGCCAAAAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLLHPPPQILISFSCRSLCSSSN*SPPKAA Trigger: GGCAGCTTTTGGCGGAGACCAGTTTGAAGAGGAACA...CAAGGACCTGCATGAGAAACTTATTAAAATCTGTGGGGGTGGGTGGAGCAGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGGAAACCACTGCAATGAGGCTTGCCTGATAGGGTTAGTGGAAAGGGTGTTCAGTAGAGACAGGTaGAAAGAGCGTTTCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PKGNHCNEACLIGLVERVFSRDR*KERFLG Trigger: TCCAAGGAAACGCTCTTTTCACCTGTCTCTACTGAA...CACCCTTTCCACTAACCCTATCAGGCAAGCCTCATTGCAGTGGTTTCCCTTTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR GCA 90 bp | ACAGATGTTCACGGAGGAGCACAGCCCAGGCCCGGAACAAGAGAGTTCTTTAGACGTTTCACAATGCACTaGAGGATACTTTCCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TDVHGGAQPRPGTREFFRRFTMH*RILSSL Trigger: CAAAGAGGAAAGTATCCTGCAGTGCATTGTGAAACG...TCTAAAGAACTCTCTTGTTCCGGGCCTGGGCTGTGCTCCTCCGTGAACATCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR CCA 90 bp | ATAATATTCCCAACTGCAACGGTCAACAGCCAGGCTGCCTGGAGCACAGATTTCTCTGGAAAGGATTCATaGCTGGCTCCTTACTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IIFPTATVNSQAAWSTDFSGKDS*LAPYSL Trigger: GAGAGAGTAAGGAGCCAGCCATGAATCCTTTCCAGA...GAAATCTGTGCTCCAGGCAGCCTGGCTGTTGACCGTTGCAGTTGGGAATATTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
||
| CDS-3UTR CCA 90 bp | CACCTGCTCCACCCACCCCCACAGATTTTAATAAGTTTCTCATGCAGGTCCTTGAAAGGAACAGTATCCTaGTCAGTGCCTTCACGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HLLHPPPQILISFSCRSLKGTVS*SVPSRP Trigger: TGGACGTGAAGGCACTGACCAGGATACTGTTCCTTT...CAAGGACCTGCATGAGAAACTTATTAAAATCTGTGGGGGTGGGTGGAGCAGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR TCA 90 bp | AATTTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTTGCCTGATAGGGCTGTTCCCAGAGCTATaGGACTCAGGCCAACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: NLSSNPKGNHCNEACLIGLFPEL*DSGQPM Trigger: CATTGGTTGGCCTGAGTCTCATAGCTCTGGGAACAG...CCCTATCAGGCAAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAAATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR TCA 90 bp | CCATTCATAATTTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTTGCCCTGCCACACAGGGTTTaGTACCTCCTGTTCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PFIIYLQTQRETTAMRLALPHRV*YLLFPE Trigger: CTCTGGGAACAGGAGGTATCAAACCCTGTGTGGCAG...GGCAAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAAATTATGAATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR TCA 90 bp | TATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCATACAGGGACTGCACCAGGCCACTaGACTGTGCCACGATCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YRRKPCSKRNRNEVFHTGTAPGH*TVPRSA Trigger: TGCTGATCGTGGCACAGTTCAGTGGCCTGGTGCAGT...CCCTGTATGAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR TCA 90 bp | TGCACCAGGCCACTGAACTGTGCCACGATCAGCACAATAATATTCCCAACTGCACAACAGCCATTTTCCTaGGTGACCTTTCATGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: CTRPLNCATISTIIFPTAQQPFS*VTFHAI Trigger: TATGGCATGAAAGGTCACTCAGGAAAATGGCTGTTG...TGCAGTTGGGAATATTATTGTGCTGATCGTGGCACAGTTCAGTGGCCTGGTGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
||
| CDS-3UTR CCA 90 bp | CACCTGCTCCACCCACCCCCACAGATTTTAATAAGTTTCTCATGCAGGTCCTTGCATGGTAGACAGATGTaGACGTGTCTTCATTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HLLHPPPQILISFSCRSLHGRQM*TCLHSS Trigger: ACTGGAATGAAGACACGTCCACATCTGTCTACCATG...CAAGGACCTGCATGAGAAACTTATTAAAATCTGTGGGGGTGGGTGGAGCAGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR CCA 90 bp | GAGGCTTGCCTGATAGGGTTAGTGGAAAGGGTGCATGGAAGAGTAGAGTCCCTGAAAGACTTGAATACATaGCCAAGAACATACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EACLIGLVERVHGRVESLKDLNT*PRTYTR Trigger: CCTGGTGTATGTTCTTGGCCATGTATTCAAGTCTTT...CAGGGACTCTACTCTTCCATGCACCCTTTCCACTAACCCTATCAGGCAAGCCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR CCA 90 bp | CTGATAGGGTTAGTGGAAAGGGTGCATGGAAGAGTAGAGTCCCTGCATGATGCCTTTTCCTCCCAGTATTaGTATGGCACCCAAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LIGLVERVHGRVESLHDAFSSQY*YGTQRL Trigger: AAGTCTTTGGGTGCCATACCAATACTGGGAGGAAAA...GGCATCATGCAGGGACTCTACTCTTCCATGCACCCTTTCCACTAACCCTATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR CCA 90 bp | AGTTGGGACAGGTTCTTAGCAGTTGTCTGGGGAAAGGAGATAGTGTTGCGACCTCCAATGTTGTCGCTTTaGAATGTCCTCAGAACGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SWDRFLAVVWGKEIVLRPPMLSL*NVLRTV Trigger: AACCGTTCTGAGGACATTCCAAAGCGACAACATTGG...AGGTCGCAACACTATCTCCTTTCCCCAGACAACTGCTAAGAACCTGTCCCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR CCA 90 bp | CACCTGCTCCACCCACCCCCACAGATTTTAATAAGTTTCTCATGCAGGTCCTTGGACAAGGTCAAACAATaGGATGAAGACAAGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLLHPPPQILISFSCRSLDKVKQ*DEDKDQ Trigger: CTGGTCCTTGTCTTCATCCCATTGTTTGACCTTGTC...CAAGGACCTGCATGAGAAACTTATTAAAATCTGTGGGGGTGGGTGGAGCAGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR TCA 90 bp | CACCTGCTCCACCCACCCCCACAGATTTTAATAAGTTTCTCATGCAGGTCCTTGAGATCAGCCGATAAATaGCAAGGTCAAACAATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HLLHPPPQILISFSCRSLRSADK*QGQTMG Trigger: TCCCATTGTTTGACCTTGTCATTTATCGGCTGATCT...CAAGGACCTGCATGAGAAACTTATTAAAATCTGTGGGGGTGGGTGGAGCAGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR GCA 90 bp | AGTTGGGACAGGTTCTTAGCAGTTGTCTGGGGAAAGGAGATAGTGTTGCGACCTGCCAAGTTCAGGACTTaGAGAAAAATCTCTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SWDRFLAVVWGKEIVLRPAKFRT*RKISWE Trigger: TTCCCAAGAGATTTTTCTGCAAGTCCTGAACTTGGC...AGGTCGCAACACTATCTCCTTTCCCCAGACAACTGCTAAGAACCTGTCCCAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR CCA 90 bp | AACATGGCTATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCCTTCTTTGGAGGGCTTaGAGGTCCAGGCAGCATCTC | + |
|
Preference number: 4 (lower is better) Translates to: NMAIDGNRVVKGTEMRSFLLWRA*RSRQHL Trigger: GAGATGCTGCCTGGACCTCCAAGCCCTCCAAAGAAG...GAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATAGCCATGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR TCA 90 bp | TATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCATACAGGGGAAGAGCTTCGGAGTTaGCTTCTTTGGAGGGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: YRRKPCSKRNRNEVFHTGEELRS*LLWRAW Trigger: CCAAGCCCTCCAAAGAAGTCAACTCCGAAGCTCTTC...CCCTGTATGAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR TCA 90 bp | TATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCATACAGGGCTGTTCCCAGAGCTATaGGACTCAGGCCAACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: YRRKPCSKRNRNEVFHTGLFPEL*DSGQPM Trigger: CATTGGTTGGCCTGAGTCTCATAGCTCTGGGAACAG...CCCTGTATGAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR TCA 90 bp | CCACCATTCATAATTTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTTCTGTTCCCAGAGCTATaGGACTCAGGCCAACCAATG | + |
|
Preference number: 4 (lower is better) Translates to: PPFIIYLQTQRETTAMRLLFPEL*DSGQPM Trigger: CATTGGTTGGCCTGAGTCTCATAGCTCTGGGAACAG...AAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAAATTATGAATGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGGAAAGGAGATAGTGTTGCGACCTCGTTTATGCTTTCTAAAATCTTAGTATCAAGCTCCCTGCATTaGTGGAGAGGTAGAAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: LGKGDSVATSFMLSKILVSSSLH*WRGRRP Trigger: CGGTCTTCTACCTCTCCATCAATGCAGGGAGCTTGA...TACTAAGATTTTAGAAAGCATAAACGAGGTCGCAACACTATCTCCTTTCCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR TCA 90 bp | CCACCATTCATAATTTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTTTCAAGCTCCCTGCATTaGTGGAGAGGTAGAAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: PPFIIYLQTQRETTAMRLSSSLH*WRGRRP Trigger: CGGTCTTCTACCTCTCCATCAATGCAGGGAGCTTGA...AAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAAATTATGAATGGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164579.9 |
||
| CDS-3UTR GCA 90 bp | GCTTGCCTGATAGGGTTAGTGGAAAGGGTGCATGGAAGAGTAGAGTCCCTGCATTCAACACAGCTTTCATaGCATAATAGGAAAATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ACLIGLVERVHGRVESLHSTQLS*HNRKIA Trigger: AGCGATTTTCCTATTATGGCATGAAAGCTGTGTTGA...ATGCAGGGACTCTACTCTTCCATGCACCCTTTCCACTAACCCTATCAGGCAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR GCA 90 bp | CACCTGCTCCACCCACCCCCACAGATTTTAATAAGTTTCTCATGCAGGTCCTTGACGTCCATAATGAGGTaGTTTGGGTATTTTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLLHPPPQILISFSCRSLTSIMR*FGYFSA Trigger: AGCAGAAAAATACCCAAAGCACCTCATTATGGACGT...CAAGGACCTGCATGAGAAACTTATTAAAATCTGTGGGGGTGGGTGGAGCAGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR GCA 90 bp | ACAGATGTTCACGGAGGAGCACAGCCCAGGCCCGGAACAAGAGAGTTCTTTAGATTTCATGCTAGATGGTaGCTGAGAATAAGAAAATTC | + |
|
Preference number: 4 (lower is better) Translates to: TDVHGGAQPRPGTREFFRFHARW*LRIRKF Trigger: GAATTTTCTTATTCTCAGGCACCATCTAGCATGAAA...TCTAAAGAACTCTCTTGTTCCGGGCCTGGGCTGTGCTCCTCCGTGAACATCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR CCA 90 bp | TCAAACCCAAAGGGAAACCACTGCAATGAGGCTTGCCTGATAGGGTTAGTGGAATTTTCCTCCCAGTATTaGTATGGCACCCAAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: SNPKGNHCNEACLIGLVEFSSQY*YGTQRL Trigger: AAGTCTTTGGGTGCCATACCAATACTGGGAGGAAAA...TTCCACTAACCCTATCAGGCAAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR TCA 90 bp | AACATGGCTATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCCATAGTAGTAGCCCATaGCGGAGAAGATCAGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NMAIDGNRVVKGTEMRSFHSSSP*RRRSGR Trigger: TCTGCCTGATCTTCTCCGTCATGGGCTACTACTATG...GAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATAGCCATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR CCA 90 bp | TCAAACCCAAAGGGAAACCACTGCAATGAGGCTTGCCTGATAGGGTTAGTGGAAAAAGACTTGAATACATaGCCAAGAACATACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNPKGNHCNEACLIGLVEKDLNT*PRTYTR Trigger: CCTGGTGTATGTTCTTGGCCATGTATTCAAGTCTTT...TTCCACTAACCCTATCAGGCAAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR CCA 90 bp | CCACCATTCATAATTTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTTTGTTCCTCTTCAAACTaGTCTCCGCCAAAAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPFIIYLQTQRETTAMRLCSSSN*SPPKAA Trigger: GGCAGCTTTTGGCGGAGACCAGTTTGAAGAGGAACA...AAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAAATTATGAATGGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR CCA 90 bp | TATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCATACAGGGAACAGCCAGGCTGCCTaGAGCACAGATTTCATGCTA | + |
|
Preference number: 4 (lower is better) Translates to: YRRKPCSKRNRNEVFHTGNSQAA*STDFML Trigger: TAGCATGAAATCTGTGCTCCAGGCAGCCTGGCTGTT...CCCTGTATGAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| 3UTR CAA 72 bp | CTTATCTCTACTACACATTTGTACTTTCCTGGGCATTaGGAGATACTGGGCCAGCTTGAGAGACATTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LISTTHLYFPGH*EILGQLERHCL Trigger: TAGGCAATGTCTCTCAAGCTGGCCCAGTATCTCCAAATGCCCAGGAAAGTACAAATGTGTAGTAGAGATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| 3UTR CAA 72 bp | TTAATAAACCTGATGGCTGTCATCCCATTGGCTGGTTaGATTCCTGTGTCCTTTACCAGCATACTGGAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LINLMAVIPLAG*IPVSFTSILER Trigger: TCTCTCCAGTATGCTGGTAAAGGACACAGGAATCAAACCAGCCAATGGGATGACAGCCATCAGGTTTATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
||
| CDS-3UTR TCA 90 bp | CATTCTCATGAACCACCAACTGGTAACAGTTCTTCTCCTCTACAGAGTACTCATTTCAGTAGAGACAGGTaGAAAGAGCGTTTCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HSHEPPTGNSSSPLQSTHFSRDR*KERFLG Trigger: TCCAAGGAAACGCTCTTTTCACCTGTCTCTACTGAA...ATGAGTACTCTGTAGAGGAGAAGAACTGTTACCAGTTGGTGGTTCATGAGAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
||
| CDS-3UTR TCA 90 bp | AACATGGCTATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCGGTCAAACAATGGGATaGAGACAAGGACCAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NMAIDGNRVVKGTEMRSFGQTMG*RQGPER Trigger: CCTTTCTGGTCCTTGTCTTCATCCCATTGTTTGACC...GAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATAGCCATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR TCA 90 bp | CTGGGGAAAGGAGATAGTGTTGCGACCTCGTTTATGCTTTCTAAAATCTTAGTAAGCCATTTTCCTGAGTaGCGAGAAGTTAACTCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGKGDSVATSFMLSKILVSHFPE*REVNSA Trigger: TGCGGAGTTAACTTCTCGTCACTCAGGAAAATGGCT...TACTAAGATTTTAGAAAGCATAAACGAGGTCGCAACACTATCTCCTTTCCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR TCA 90 bp | CTGGGGAAAGGAGATAGTGTTGCGACCTCGTTTATGCTTTCTAAAATCTTAGTATCTTGGGAAGCTGGCTaGGGATGGATCATTCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: LGKGDSVATSFMLSKILVSWEAG*GWIIPF Trigger: AAATGGAATGATCCATCCTCAGCCAGCTTCCCAAGA...TACTAAGATTTTAGAAAGCATAAACGAGGTCGCAACACTATCTCCTTTCCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR GCA 90 bp | TATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCATACAGGGGAAGTATCTAGTCCGTaGCTCTGCATGTTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YRRKPCSKRNRNEVFHTGEVSSP*LCMFLF Trigger: GAAGAGGAACATGCAGAGGCACGGACTAGATACTTC...CCCTGTATGAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR GCA 90 bp | CTGACCACCATTCATAATTTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGGAAGTATCTAGTCCGTaGCTCTGCATGTTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTTIHNLSSNPKGNHCNEEVSSP*LCMFLF Trigger: GAAGAGGAACATGCAGAGGCACGGACTAGATACTTC...CTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAAATTATGAATGGTGGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164579.9 |
||
| CDS-3UTR GCA 90 bp | TTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTTGCCTGATAGGGTTAAATCCCAAAAGCCAATaGATAGCAGTCTTCGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSSNPKGNHCNEACLIGLNPKSQ*IAVFAK Trigger: TTTGGCGAAGACTGCTATGCATTGGCTTTTGGGATT...TAACCCTATCAGGCAAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164579.9 |
||
| CDS-3UTR GCA 90 bp | TATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCATACAGGGCAGGCCACTGAACTGTaGCACGATCAGCACAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: YRRKPCSKRNRNEVFHTGQATEL*HDQHNN Trigger: ATTATTGTGCTGATCGTGGCACAGTTCAGTGGCCTG...CCCTGTATGAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR GCA 90 bp | ACTGAACTGTGCCACGATCAGCACAATAATATTCCCAACTGCAACGGTCAACAGCTGAGTGACCTTTCATaGCATAATAGGAAAATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: TELCHDQHNNIPNCNGQQLSDLS*HNRKIA Trigger: AGCGATTTTCCTATTATGGCATGAAAGGTCACTCAG...CTGTTGACCGTTGCAGTTGGGAATATTATTGTGCTGATCGTGGCACAGTTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGGAAAGGAGATAGTGTTGCGACCTCGTTTATGCTTTCTAAAATCTTAGTATCTGGAAAGGATTCATaGCTGGCTCCTTACTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LGKGDSVATSFMLSKILVSGKDS*LAPYSL Trigger: GAGAGAGTAAGGAGCCAGCCATGAATCCTTTCCAGA...TACTAAGATTTTAGAAAGCATAAACGAGGTCGCAACACTATCTCCTTTCCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR CCA 90 bp | ATTCATAATTTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTTGCCTGTCTGGAAAGGATTCATaGCTGGCTCCTTACTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: IHNLSSNPKGNHCNEACLSGKDS*LAPYSL Trigger: GAGAGAGTAAGGAGCCAGCCATGAATCCTTTCCAGA...CAGGCAAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAAATTATGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR CCA 90 bp | ACCACCATTCATAATTTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTTCTGGAAAGGATTCATaGCTGGCTCCTTACTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TTIHNLSSNPKGNHCNEASGKDS*LAPYSL Trigger: GAGAGAGTAAGGAGCCAGCCATGAATCCTTTCCAGA...AGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAAATTATGAATGGTGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| 3UTR CAA 72 bp | TGCAAAGTGTTAATAAACCTGATGGCTGTCATCCCATaGGCTGGTTTGATTCCTGTGTCCTTTACCAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: CKVLINLMAVIP*AGLIPVSFTSI Trigger: TATGCTGGTAAAGGACACAGGAATCAAACCAGCCAATGGGATGACAGCCATCAGGTTTATTAACACTTTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
||
| 3UTR CAA 72 bp | TTCCGTTTCACAATGCACTGCAGGATACTTTCCTCTTaGCACAGTTCTGTACTCAGACACTCCATAGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FRFTMHCRILSS*HSSVLRHSIVF Trigger: AAAGACTATGGAGTGTCTGAGTACAGAACTGTGCAAAGAGGAAAGTATCCTGCAGTGCATTGTGAAACGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
||
| CDS-3UTR TCA 90 bp | ACCACCATTCATAATTTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTTTCAGTAGAGACAGGTaGAAAGAGCGTTTCCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TTIHNLSSNPKGNHCNEAFSRDR*KERFLG Trigger: TCCAAGGAAACGCTCTTTTCACCTGTCTCTACTGAA...AGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAAATTATGAATGGTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR GCA 90 bp | TATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCATACAGGGCATCTTGCTTCCCATTaGAAACACAACAAGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: YRRKPCSKRNRNEVFHTGHLASH*KHNKCQ Trigger: CTGGCACTTGTTGTGTTTGCAATGGGAAGCAAGATG...CCCTGTATGAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR CCA 90 bp | CTGACCACCATTCATAATTTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGCATGGTAGACAGATGTaGACGTGTCTTCATTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LTTIHNLSSNPKGNHCNEHGRQM*TCLHSS Trigger: ACTGGAATGAAGACACGTCCACATCTGTCTACCATG...CTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAAATTATGAATGGTGGTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR CCA 90 bp | CCACCATTCATAATTTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTTCATGGTAGACAGATGTaGACGTGTCTTCATTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPFIIYLQTQRETTAMRLHGRQM*TCLHSS Trigger: ACTGGAATGAAGACACGTCCACATCTGTCTACCATG...AAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAAATTATGAATGGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGGAAAGGAGATAGTGTTGCGACCTCGTTTATGCTTTCTAAAATCTTAGTATCTTGGTTTCTAGGTTaGTCATATTCCCCTGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: LGKGDSVATSFMLSKILVSWFLG*SYSPGC Trigger: ACATCCAGGGGAATATGATCAACCTAGAAACCAAGA...TACTAAGATTTTAGAAAGCATAAACGAGGTCGCAACACTATCTCCTTTCCCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR GCA 90 bp | TTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTTGCCTGATAGGGTTATCAACACAGCTTTCATaGCATAATAGGAAAATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSSNPKGNHCNEACLIGLSTQLS*HNRKIA Trigger: AGCGATTTTCCTATTATGGCATGAAAGCTGTGTTGA...TAACCCTATCAGGCAAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGGAAAGGAGATAGTGTTGCGACCTCGTTTATGCTTTCTAAAATCTTAGTAGTGTCTTCATTCCAGTaGAGGAAGTACAGGAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: LGKGDSVATSFMLSKILVVSSFQ*RKYRKY Trigger: GTATTTCCTGTACTTCCTGCACTGGAATGAAGACAC...TACTAAGATTTTAGAAAGCATAAACGAGGTCGCAACACTATCTCCTTTCCCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR GCA 90 bp | ACCACCATTCATAATTTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTGTGTCTTCATTCCAGTaGAGGAAGTACAGGAAATAC | + |
|
Preference number: 4 (lower is better) Translates to: TTIHNLSSNPKGNHCNEAVSSFQ*RKYRKY Trigger: GTATTTCCTGTACTTCCTGCACTGGAATGAAGACAC...AGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAAATTATGAATGGTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGGAAAGGAGATAGTGTTGCGACCTCGTTTATGCTTTCTAAAATCTTAGTAAATCCCAAAAGCCAATaGATAGCAGTCTTCGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGKGDSVATSFMLSKILVNPKSQ*IAVFAK Trigger: TTTGGCGAAGACTGCTATGCATTGGCTTTTGGGATT...TACTAAGATTTTAGAAAGCATAAACGAGGTCGCAACACTATCTCCTTTCCCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR GCA 90 bp | TTAGCATGCCATGAGACTTATCTCTACTACACATTTGTACTTTCCTGGGCATTTCTCTATTTCACCATCTaGCAAGTTCAGGACTTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LACHETYLYYTFVLSWAFLYFTI*QVQDLQ Trigger: CTGCAAGTCCTGAACTTGGCAGATGGTGAAATAGAG...AAATGCCCAGGAAAGTACAAATGTGTAGTAGAGATAAGTCTCATGGCATGCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR GCA 90 bp | AACATGGCTATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCGGATACTTTCCTCTTTaGACAGTTCTGTACTCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: NMAIDGNRVVKGTEMRSFGYFPL*TVLYSD Trigger: GTCTGAGTACAGAACTGTGCAAAGAGGAAAGTATCC...GAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATAGCCATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR GCA 90 bp | CTGGGGAAAGGAGATAGTGTTGCGACCTCGTTTATGCTTTCTAAAATCTTAGTAAGAAAACATGACCTCTaGTGCTGTAACCAGGACATA | + |
|
Preference number: 4 (lower is better) Translates to: LGKGDSVATSFMLSKILVRKHDL*CCNQDI Trigger: TATGTCCTGGTTACAGCAGCAGAGGTCATGTTTTCT...TACTAAGATTTTAGAAAGCATAAACGAGGTCGCAACACTATCTCCTTTCCCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR CCA 90 bp | AACATGGCTATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCCCAGAACATGGGCAGTaGGATATAAAGGAACAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: NMAIDGNRVVKGTEMRSFPEHGQ*DIKEQY Trigger: ATACTGTTCCTTTATATCCCACTGCCCATGTTCTGG...GAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATAGCCATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR CCA 90 bp | AACATGGCTATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCAAAGACTTGAATACATaGCCAAGAACATACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NMAIDGNRVVKGTEMRSFKDLNT*PRTYTR Trigger: CCTGGTGTATGTTCTTGGCCATGTATTCAAGTCTTT...GAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATAGCCATGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR CCA 90 bp | TTAGCATGCCATGAGACTTATCTCTACTACACATTTGTACTTTCCTGGGCATTTTTTTCCTCCCAGTATTaGTATGGCACCCAAAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: LACHETYLYYTFVLSWAFFSSQY*YGTQRL Trigger: AAGTCTTTGGGTGCCATACCAATACTGGGAGGAAAA...AAATGCCCAGGAAAGTACAAATGTGTAGTAGAGATAAGTCTCATGGCATGCTAA 40% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR CCA 90 bp | CTGGGGAAAGGAGATAGTGTTGCGACCTCGTTTATGCTTTCTAAAATCTTAGTACAATGGATAGTTTATTaGCTGGAATGTCTTCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGKGDSVATSFMLSKILVQWIVY*LECLLP Trigger: AGGCAGAAGACATTCCAGCCAATAAACTATCCATTG...TACTAAGATTTTAGAAAGCATAAACGAGGTCGCAACACTATCTCCTTTCCCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR GCA 90 bp | TATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCATACAGGGTTATTTCTGTTTCCCTaGACTGTCACCTCTATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YRRKPCSKRNRNEVFHTGLFLFP*TVTSIS Trigger: TGAAATAGAGGTGACAGTGCAGGGAAACAGAAATAA...CCCTGTATGAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| 3UTR CAA 72 bp | TGTTGTACTTCAGATGAAAATGTAAGTCTTGGCTTTTaGTCTCCAGGCGTAGTTTCGAATAGTGTGTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: CCTSDENVSLGF*SPGVVSNSVLC Trigger: ACACAACACACTATTCGAAACTACGCCTGGAGACAAAAAGCCAAGACTTACATTTTCATCTGAAGTACAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
||
| CDS-3UTR TCA 90 bp | TTAGCATGCCATGAGACTTATCTCTACTACACATTTGTACTTTCCTGGGCATTTGTACCAAAGTCTAGTTaGCCTAAATTGAGAGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LACHETYLYYTFVLSWAFVPKSS*PKLREK Trigger: CTTTTCTCTCAATTTAGGTCAACTAGACTTTGGTAC...AAATGCCCAGGAAAGTACAAATGTGTAGTAGAGATAAGTCTCATGGCATGCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR GCA 90 bp | TTAGCATGCCATGAGACTTATCTCTACTACACATTTGTACTTTCCTGGGCATTTTCAACACAGCTTTCATaGCATAATAGGAAAATCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LACHETYLYYTFVLSWAFSTQLS*HNRKIA Trigger: AGCGATTTTCCTATTATGGCATGAAAGCTGTGTTGA...AAATGCCCAGGAAAGTACAAATGTGTAGTAGAGATAAGTCTCATGGCATGCTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR CCA 90 bp | CTGGGGAAAGGAGATAGTGTTGCGACCTCGTTTATGCTTTCTAAAATCTTAGTAAGATTTCATGCTAGATaGTGCCTGAGAATAAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGKGDSVATSFMLSKILVRFHAR*CLRIRK Trigger: TTTTCTTATTCTCAGGCACCATCTAGCATGAAATCT...TACTAAGATTTTAGAAAGCATAAACGAGGTCGCAACACTATCTCCTTTCCCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| 3UTR CAA 72 bp | TTATCAATAGCCTGTAGGACACGGAGTCTTGGATCCTaGTTTAAAGATATACCTGAAAACCTTGTCCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LSIACRTRSLGS*FKDIPENLVLK Trigger: TTTTAGGACAAGGTTTTCAGGTATATCTTTAAACAAGGATCCAAGACTCCGTGTCCTACAGGCTATTGATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS TCA 90 bp | GAAGGCGATGCTGAGTGGGTAGCTAGAGCCGAAGAGCTTCGGAGTTaGCTTCTTTGGAGGGCTTGGAGGTCCAGGCAGCATCTCTTCAGT | + |
|
Preference number: 5 (lower is better) Translates to: EGDAEWVARAEELRS*LLWRAWRSRQHLFS Trigger: ACTGAAGAGATGCTGCCTGGACCTCCAAGCCCTCCAAAGAAGTCAACTCCGAAGCTCTTCGGCTCTAGCTACCCACTCAGCATCGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023616.11 ENSMUST00000164579.9 ENSMUST00000165380.8 ENSMUST00000165531.9 ENSMUST00000168279.2 |
||
| CDS-3UTR CAA 90 bp | ACAGATGTTCACGGAGGAGCACAGCCCAGGCCCGGAACAAGAGAGTTCTTTAGACGAAGAGCTTCGGAGTaGACTTCTTTGGAGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: TDVHGGAQPRPGTREFFRRRASE*TSLEGL Trigger: CAAGCCCTCCAAAGAAGTCAACTCCGAAGCTCTTCG...TCTAAAGAACTCTCTTGTTCCGGGCCTGGGCTGTGCTCCTCCGTGAACATCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
||
| CDS-3UTR CAA 90 bp | AGTTGGGACAGGTTCTTAGCAGTTGTCTGGGGAAAGGAGATAGTGTTGCGACCTGCTGCCACACAGGGTTaGATACCTCCTGTTCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SWDRFLAVVWGKEIVLRPAATQG*IPPVPR Trigger: TCTGGGAACAGGAGGTATCAAACCCTGTGTGGCAGC...AGGTCGCAACACTATCTCCTTTCCCCAGACAACTGCTAAGAACCTGTCCCAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| CDS TCA 90 bp | AAATCCCAAATCGCCATCCATTTTGTTAGCTTGCAGAGTCCACCGTaGGCCCTGTTGGTCCAAAAGAGCCCAGAACATGGGCAGTGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KSQIAIHFVSLQSPP*ALLVQKSPEHGQWD Trigger: ATCCCACTGCCCATGTTCTGGGCTCTTTTGGACCAACAGGGCTCACGGTGGACTCTGCAAGCTAACAAAATGGATGGCGATTTGGGATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023616.11 ENSMUST00000165531.9 |
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| CDS-3UTR CAA 90 bp | ACAGATGTTCACGGAGGAGCACAGCCCAGGCCCGGAACAAGAGAGTTCTTTAGAGAATCTGCTTTTCTGTaGCCTCATGGATACCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: TDVHGGAQPRPGTREFFRESAFL*PHGYPL Trigger: CAGAGGGTATCCATGAGGCAACAGAAAAGCAGATTC...TCTAAAGAACTCTCTTGTTCCGGGCCTGGGCTGTGCTCCTCCGTGAACATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| CDS-3UTR CAA 90 bp | TCAAACCCAAAGGGAAACCACTGCAATGAGGCTTGCCTGATAGGGTTAGTGGAACGAAGAGCTTCGGAGTaGACTTCTTTGGAGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SNPKGNHCNEACLIGLVERRASE*TSLEGL Trigger: CAAGCCCTCCAAAGAAGTCAACTCCGAAGCTCTTCG...TTCCACTAACCCTATCAGGCAAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
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| CDS-3UTR CAA 90 bp | TCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTTGCCTGATAGGGTTAGTGCGAAGAGCTTCGGAGTaGACTTCTTTGGAGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SSNPKGNHCNEACLIGLVRRASE*TSLEGL Trigger: CAAGCCCTCCAAAGAAGTCAACTCCGAAGCTCTTCG...CACTAACCCTATCAGGCAAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
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| CDS-3UTR CAA 90 bp | CTGATAGGGTTAGTGGAAAGGGTGCATGGAAGAGTAGAGTCCCTGCATGATGCCTTTTTCCTCCCAGTATaGGTATGGCACCCAAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: LIGLVERVHGRVESLHDAFFLPV*VWHPKT Trigger: AGTCTTTGGGTGCCATACCAATACTGGGAGGAAAAA...GGCATCATGCAGGGACTCTACTCTTCCATGCACCCTTTCCACTAACCCTATCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
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| CDS-3UTR CAA 90 bp | TTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTTGCCTGATAGGGTTAGCTGCCACACAGGGTTaGATACCTCCTGTTCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LSSNPKGNHCNEACLIGLAATQG*IPPVPR Trigger: TCTGGGAACAGGAGGTATCAAACCCTGTGTGGCAGC...TAACCCTATCAGGCAAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
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| CDS-3UTR CAA 90 bp | AGTTGGGACAGGTTCTTAGCAGTTGTCTGGGGAAAGGAGATAGTGTTGCGACCTTTGCAGAAAAATCTCTaGGGAAGCTGGCTGAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: SWDRFLAVVWGKEIVLRPLQKNL*GSWLRM Trigger: CATCCTCAGCCAGCTTCCCAAGAGATTTTTCTGCAA...AGGTCGCAACACTATCTCCTTTCCCCAGACAACTGCTAAGAACCTGTCCCAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| CDS TCA 90 bp | TGGAGGGCTTGGAGGTCCAGGCAGCATCTCTTCAGTAGAGACAGGTaGAAAGAGCGTTTCCTTGGACTCATTTTTCTGGAAAGGATTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WRAWRSRQHLFSRDR*KERFLGLIFLERIH Trigger: ATGAATCCTTTCCAGAAAAATGAGTCCAAGGAAACGCTCTTTTCACCTGTCTCTACTGAAGAGATGCTGCCTGGACCTCCAAGCCCTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000023616.11 ENSMUST00000164579.9 ENSMUST00000165380.8 ENSMUST00000165531.9 ENSMUST00000168279.2 |
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| CDS GCA 90 bp | CCAGAACATGGGCAGTGGGATATAAAGGAACAGTATCCTGGTCAGTaGCTTCACGTCCATAATGAGGTGCTTTGGGTATTTTTCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: PEHGQWDIKEQYPGQ*LHVHNEVLWVFFCC Trigger: GCAGCAGAAAAATACCCAAAGCACCTCATTATGGACGTGAAGGCACTGACCAGGATACTGTTCCTTTATATCCCACTGCCCATGTTCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000023616.11 ENSMUST00000165531.9 |
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| CDS CCA 90 bp | GCTTCCCATTGCAAACACAACAAGTGCCAGCACCATGAGCAATCCTaGAATCCCAAAAGCCAATGCATAGCAGTCTTCGCCAAAACACTT | + |
|
Preference number: 5 (lower is better) Translates to: ASHCKHNKCQHHEQS*NPKSQCIAVFAKTL Trigger: AAGTGTTTTGGCGAAGACTGCTATGCATTGGCTTTTGGGATTCCAGGATTGCTCATGGTGCTGGCACTTGTTGTGTTTGCAATGGGAAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023616.11 ENSMUST00000165531.9 |
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| CDS-3UTR CAA 90 bp | CACCTGCTCCACCCACCCCCACAGATTTTAATAAGTTTCTCATGCAGGTCCTTGATGGCACCCAAAGACTaGAATACATGGCCAAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: HLLHPPPQILISFSCRSLMAPKD*NTWPRT Trigger: TGTTCTTGGCCATGTATTCAAGTCTTTGGGTGCCAT...CAAGGACCTGCATGAGAAACTTATTAAAATCTGTGGGGGTGGGTGGAGCAGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| CDS-3UTR CAA 90 bp | CACCTGCTCCACCCACCCCCACAGATTTTAATAAGTTTCTCATGCAGGTCCTTGTTTTTCCTCCCAGTATaGGTATGGCACCCAAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: HLLHPPPQILISFSCRSLFFLPV*VWHPKT Trigger: AGTCTTTGGGTGCCATACCAATACTGGGAGGAAAAA...CAAGGACCTGCATGAGAAACTTATTAAAATCTGTGGGGGTGGGTGGAGCAGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| CDS-3UTR CAA 90 bp | AATGAGGCTTGCCTGATAGGGTTAGTGGAAAGGGTGCATGGAAGAGTAGAGTCCTTTTTCCTCCCAGTATaGGTATGGCACCCAAAGACT | + |
|
Preference number: 5 (lower is better) Translates to: NEACLIGLVERVHGRVESFFLPV*VWHPKT Trigger: AGTCTTTGGGTGCCATACCAATACTGGGAGGAAAAA...GGACTCTACTCTTCCATGCACCCTTTCCACTAACCCTATCAGGCAAGCCTCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
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| CDS-3UTR CAA 90 bp | AGTTGGGACAGGTTCTTAGCAGTTGTCTGGGGAAAGGAGATAGTGTTGCGACCTACATCTTGCTTCCCATaGCAAACACAACAAGTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SWDRFLAVVWGKEIVLRPTSCFP*QTQQVP Trigger: TGGCACTTGTTGTGTTTGCAATGGGAAGCAAGATGT...AGGTCGCAACACTATCTCCTTTCCCCAGACAACTGCTAAGAACCTGTCCCAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| CDS CCA 90 bp | TCAGTAGAGACAGGTGAAAAGAGCGTTTCCTTGGACTCATTTTTCTaGAAAGGATTCATGGCTGGCTCCTTACTCTCTCTCTCCTCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SVETGEKSVSLDSFF*KGFMAGSLLSLSSS Trigger: GCTTGAGGAGAGAGAGAGTAAGGAGCCAGCCATGAATCCTTTCCAGAAAAATGAGTCCAAGGAAACGCTCTTTTCACCTGTCTCTACTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000023616.11 ENSMUST00000164579.9 ENSMUST00000165380.8 ENSMUST00000165531.9 ENSMUST00000168279.2 |
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| CDS-3UTR CAA 90 bp | CCACCATTCATAATTTATCTTCAAACCCAAAGGGAAACCACTGCAATGAGGCTTGCTGCCACACAGGGTTaGATACCTCCTGTTCCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PPFIIYLQTQRETTAMRLAATQG*IPPVPR Trigger: TCTGGGAACAGGAGGTATCAAACCCTGTGTGGCAGC...AAGCCTCATTGCAGTGGTTTCCCTTTGGGTTTGAAGATAAATTATGAATGGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164579.9 ENSMUST00000168279.2 |
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| CDS-3UTR CAA 90 bp | AATGTAAGTCTTGGCTTTTTGTCTCCAGGCGTAGTTTCGAATAGTGTGTTGTGTCGAAGAGCTTCGGAGTaGACTTCTTTGGAGGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: NVSLGFLSPGVVSNSVLCRRASE*TSLEGL Trigger: CAAGCCCTCCAAAGAAGTCAACTCCGAAGCTCTTCG...ACACAACACACTATTCGAAACTACGCCTGGAGACAAAAAGCCAAGACTTACATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000165380.8 |
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| CDS-3UTR CAA 90 bp | AGTTGGGACAGGTTCTTAGCAGTTGTCTGGGGAAAGGAGATAGTGTTGCGACCTTTGAGAGAAAAGACATaGTCTTCCGTTTCACAATGC | + |
|
Preference number: 5 (lower is better) Translates to: SWDRFLAVVWGKEIVLRPLREKT*SSVSQC Trigger: GCATTGTGAAACGGAAGACAATGTCTTTTCTCTCAA...AGGTCGCAACACTATCTCCTTTCCCCAGACAACTGCTAAGAACCTGTCCCAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| CDS-3UTR CAA 90 bp | AGTTGGGACAGGTTCTTAGCAGTTGTCTGGGGAAAGGAGATAGTGTTGCGACCTCAGAGCCTTGTATTCTaGGTTTCTAGGTTGATCATA | + |
|
Preference number: 5 (lower is better) Translates to: SWDRFLAVVWGKEIVLRPQSLVF*VSRLII Trigger: TATGATCAACCTAGAAACCAAGAATACAAGGCTCTG...AGGTCGCAACACTATCTCCTTTCCCCAGACAACTGCTAAGAACCTGTCCCAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| CDS TCA 90 bp | TTCCTGAAGCGGTTGCAGATAGCAAACCATATACATTTGGTAACTTaGGCCACTATGTTCCCTTCAGGAGGCGGTTTTCTGTACATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: FLKRLQIANHIHLVT*ATMFPSGGGFLYIL Trigger: CAAGATGTACAGAAAACCGCCTCCTGAAGGGAACATAGTGGCTCAAGTTACCAAATGTATATGGTTTGCTATCTGCAACCGCTTCAGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023616.11 ENSMUST00000165531.9 |
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| CDS-3UTR CAA 90 bp | CTGGGGAAAGGAGATAGTGTTGCGACCTCGTTTATGCTTTCTAAAATCTTAGTAATGGCTGTCATCCCATaGGCTGGTTTGATTCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGKGDSVATSFMLSKILVMAVIP*AGLIPV Trigger: CACAGGAATCAAACCAGCCAATGGGATGACAGCCAT...TACTAAGATTTTAGAAAGCATAAACGAGGTCGCAACACTATCTCCTTTCCCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| CDS-3UTR CAA 90 bp | AACATGGCTATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCACGCTGAGAGGAGCATaGGCATCCAAGGAAATATTC | + |
|
Preference number: 5 (lower is better) Translates to: NMAIDGNRVVKGTEMRSFTLRGA*ASKEIF Trigger: GAATATTTCCTTGGATGCCAATGCTCCTCTCAGCGT...GAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATAGCCATGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| CDS-3UTR CAA 90 bp | CTGGGGAAAGGAGATAGTGTTGCGACCTCGTTTATGCTTTCTAAAATCTTAGTAAAATCGCCATCCATTTaGTTAGCTTGCAGAGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LGKGDSVATSFMLSKILVKSPSI*LACRVH Trigger: GTGGACTCTGCAAGCTAACAAAATGGATGGCGATTT...TACTAAGATTTTAGAAAGCATAAACGAGGTCGCAACACTATCTCCTTTCCCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| CDS-3UTR CAA 90 bp | AACATGGCTATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCTGCCAAGTTCAGGACTaGCAGAAAAATCTCTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: NMAIDGNRVVKGTEMRSFCQVQD*QKNLLG Trigger: TCCCAAGAGATTTTTCTGCAAGTCCTGAACTTGGCA...GAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATAGCCATGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| CDS-3UTR CAA 90 bp | CTGGGGAAAGGAGATAGTGTTGCGACCTCGTTTATGCTTTCTAAAATCTTAGTAGCAATGGATAGTTTATaGGCTGGAATGTCTTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGKGDSVATSFMLSKILVAMDSL*AGMSSA Trigger: GGCAGAAGACATTCCAGCCAATAAACTATCCATTGC...TACTAAGATTTTAGAAAGCATAAACGAGGTCGCAACACTATCTCCTTTCCCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| CDS-3UTR CAA 90 bp | AACATGGCTATAGACGGAAACCGTGTAGTAAAAGGAACAGAAATGAGGTCTTTCAGGATACTTTCCTCTTaGCACAGTTCTGTACTCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NMAIDGNRVVKGTEMRSFRILSS*HSSVLR Trigger: TCTGAGTACAGAACTGTGCAAAGAGGAAAGTATCCT...GAAAGACCTCATTTCTGTTCCTTTTACTACACGGTTTCCGTCTATAGCCATGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| CDS-3UTR CAA 90 bp | CTGGGGAAAGGAGATAGTGTTGCGACCTCGTTTATGCTTTCTAAAATCTTAGTATTCTTGGTTTCTAGGTaGATCATATTCCCCTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LGKGDSVATSFMLSKILVFLVSR*IIFPWM Trigger: CATCCAGGGGAATATGATCAACCTAGAAACCAAGAA...TACTAAGATTTTAGAAAGCATAAACGAGGTCGCAACACTATCTCCTTTCCCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| CDS-3UTR CAA 90 bp | CTGGGGAAAGGAGATAGTGTTGCGACCTCGTTTATGCTTTCTAAAATCTTAGTATATACATTTGGTAACTaGAGCCACTATGTTCCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LGKGDSVATSFMLSKILVYTFGN*SHYVPF Trigger: GAAGGGAACATAGTGGCTCAAGTTACCAAATGTATA...TACTAAGATTTTAGAAAGCATAAACGAGGTCGCAACACTATCTCCTTTCCCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023616.11 |
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| CDS TCA 72 bp | GCTGAGTGGGTAGCTAGAGCCGAAGAGCTTCGGAGTTaGCTTCTTTGGAGGGCTTGGAGGTCCAGGCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: AEWVARAEELRS*LLWRAWRSRQH Trigger: ATGCTGCCTGGACCTCCAAGCCCTCCAAAGAAGTCAACTCCGAAGCTCTTCGGCTCTAGCTACCCACTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000023616.11 ENSMUST00000164579.9 ENSMUST00000165380.8 ENSMUST00000165531.9 ENSMUST00000168279.2 |
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| CDS TCA 72 bp | ATCGCCATCCATTTTGTTAGCTTGCAGAGTCCACCGTaGGCCCTGTTGGTCCAAAAGAGCCCAGAACATGGG | + |
|
Preference number: 6 (lower is better) Translates to: IAIHFVSLQSPP*ALLVQKSPEHG Trigger: CCCATGTTCTGGGCTCTTTTGGACCAACAGGGCTCACGGTGGACTCTGCAAGCTAACAAAATGGATGGCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023616.11 ENSMUST00000165531.9 |
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| CDS CCA 72 bp | ATTTTGTTAGCTTGCAGAGTCCACCGTGAGCCCTGTTaGTCCAAAAGAGCCCAGAACATGGGCAGTGGGATA | + |
|
Preference number: 6 (lower is better) Translates to: ILLACRVHREPC*SKRAQNMGSGI Trigger: TATCCCACTGCCCATGTTCTGGGCTCTTTTGGACCAACAGGGCTCACGGTGGACTCTGCAAGCTAACAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023616.11 ENSMUST00000165531.9 |
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| CDS GCA 72 bp | CAGCACCATGAGCAATCCTGGAATCCCAAAAGCCAATaGATAGCAGTCTTCGCCAAAACACTTCACATCCCC | + |
|
Preference number: 6 (lower is better) Translates to: QHHEQSWNPKSQ*IAVFAKTLHIP Trigger: GGGGATGTGAAGTGTTTTGGCGAAGACTGCTATGCATTGGCTTTTGGGATTCCAGGATTGCTCATGGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000023616.11 ENSMUST00000164579.9 ENSMUST00000165531.9 |
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| CDS TCA 72 bp | TGCTTCCCATTGCAAACACAACAAGTGCCAGCACCATaGGCAATCCTGGAATCCCAAAAGCCAATGCATAGC | + |
|
Preference number: 6 (lower is better) Translates to: CFPLQTQQVPAP*AILESQKPMHS Trigger: GCTATGCATTGGCTTTTGGGATTCCAGGATTGCTCATGGTGCTGGCACTTGTTGTGTTTGCAATGGGAAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023616.11 ENSMUST00000165531.9 |
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| CDS GCA 72 bp | GGGCAGTGGGATATAAAGGAACAGTATCCTGGTCAGTaGCTTCACGTCCATAATGAGGTGCTTTGGGTATTT | + |
|
Preference number: 6 (lower is better) Translates to: GQWDIKEQYPGQ*LHVHNEVLWVF Trigger: AAATACCCAAAGCACCTCATTATGGACGTGAAGGCACTGACCAGGATACTGTTCCTTTATATCCCACTGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023616.11 ENSMUST00000165531.9 |
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| CDS TCA 72 bp | CGGTTGCAGATAGCAAACCATATACATTTGGTAACTTaGGCCACTATGTTCCCTTCAGGAGGCGGTTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: RLQIANHIHLVT*ATMFPSGGGFL Trigger: CAGAAAACCGCCTCCTGAAGGGAACATAGTGGCTCAAGTTACCAAATGTATATGGTTTGCTATCTGCAACCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023616.11 ENSMUST00000165531.9 |
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| CDS CAA 90 bp | GTTCCTGAAGCGGTTGCAGATAGCAAACCATATACATTTGGTAACTaGAGCCACTATGTTCCCTTCAGGAGGCGGTTTTCTGTACATCTT | + |
|
Preference number: 6 (lower is better) Translates to: VPEAVADSKPYTFGN*SHYVPFRRRFSVHL Trigger: AAGATGTACAGAAAACCGCCTCCTGAAGGGAACATAGTGGCTCAAGTTACCAAATGTATATGGTTTGCTATCTGCAACCGCTTCAGGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023616.11 ENSMUST00000165531.9 |
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| CDS CAA 72 bp | ATTTTTCCTCCCAGTATTGGTATGGCACCCAAAGACTaGAATACATGGCCAAGAACATACACCAGGGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: IFPPSIGMAPKD*NTWPRTYTRDR Trigger: TCTGTCCCTGGTGTATGTTCTTGGCCATGTATTCAAGTCTTTGGGTGCCATACCAATACTGGGAGGAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000023616.11 ENSMUST00000164579.9 ENSMUST00000168279.2 |
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