Pregenerated sensors for SLC15A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025557Ensembl transcript IDs: ENSMUST00000088386.8
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ATTCTGGCTCACACTTCTGAGGTCTTCTCCATCAGGGCTCTGTGGTaGAGTGTCCTGTCCCTTGGACAGAGGTCAGGGCTCATGTTGTAC | + |
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Preference number: 1 (lower is better) Translates to: ILAHTSEVFSIRALW*SVLSLGQRSGLMLY Trigger: GTACAACATGAGCCCTGACCTCTGTCCAAGGGACAGGACACTCCACCACAGAGCCCTGATGGAGAAGACCTCAGAAGTGTGAGCCAGAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| 3UTR GCA 90 bp | AAGGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTaGTTTGTTATTATTCTGGCTCACACTTCTGAGGTCTTCTCCATC | + |
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Preference number: 1 (lower is better) Translates to: KAPLEFQVHSCWLEN*FVIILAHTSEVFSI Trigger: GATGGAGAAGACCTCAGAAGTGTGAGCCAGAATAATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| 3UTR CAA 90 bp | CTGAGGTCTTCTCCATCAGGGCTCTGTGGTGGAGTGTCCTGTCCCTaGGACAGAGGTCAGGGCTCATGTTGTACTTGGATCTTTCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LRSSPSGLCGGVSCP*DRGQGSCCTWIFLH Trigger: GTGGAGAAAGATCCAAGTACAACATGAGCCCTGACCTCTGTCCAAGGGACAGGACACTCCACCACAGAGCCCTGATGGAGAAGACCTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAAGAGTGTCCTGTCCCTTaGACAGAGGTCAGGGCTCAT | + |
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Preference number: 2 (lower is better) Translates to: RPAWSIEQVPGQSGLYREECPVP*TEVRAH Trigger: ATGAGCCCTGACCTCTGTCCAAGGGACAGGACACTC...TTCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAAGGCTCATGTTGTACTTaGATCTTTCTCCACTTGCCT | + |
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Preference number: 2 (lower is better) Translates to: RPAWSIEQVPGQSGLYREGSCCT*IFLHLP Trigger: AGGCAAGTGGAGAAAGATCCAAGTACAACATGAGCC...TTCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| 3UTR-3UTR CCA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATTCCATCAGGGCTCTGTaGTGGAGTGTCCTGTCCCTT | + |
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Preference number: 2 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYSIRAL*WSVLSL Trigger: AAGGGACAGGACACTCCACCACAGAGCCCTGATGGA...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| 3UTR CCA 72 bp | GCTCACACTTCTGAGGTCTTCTCCATCAGGGCTCTGTaGTGGAGTGTCCTGTCCCTTGGACAGAGGTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: AHTSEVFSIRAL*WSVLSLGQRSG Trigger: CCCTGACCTCTGTCCAAGGGACAGGACACTCCACCACAGAGCCCTGATGGAGAAGACCTCAGAAGTGTGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| 3UTR-3UTR CAA 90 bp | AAGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAGGAGTGTCCTGTCCCTaGGACAGAGGTCAGGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: KASLVYRASSRAVRLIQRGVSCP*DRGQGS Trigger: TGAGCCCTGACCTCTGTCCAAGGGACAGGACACTCC...TCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR GCA 90 bp | AGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAACACTGTTTGGGGAAGTaGCCCGCCCCTGCCACGATG | + |
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Preference number: 4 (lower is better) Translates to: RPAWSIEQVPGQSGLYREHCLGK*PAPATM Trigger: CATCGTGGCAGGGGCGGGGCACTTCCCCAAACAGTG...TTCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | ACAGAGGTCAGGGCTCATGTTGTACTTGGATCTTTCTCCACTTGCCTTCTGCCCAGCCATGAGAGCCGCTaGAACCCCGAAGGCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: TEVRAHVVLGSFSTCLLPSHESR*NPEGQW Trigger: CCACTGGCCTTCGGGGTTCCAGCGGCTCTCATGGCT...GGGCAGAAGGCAAGTGGAGAAAGATCCAAGTACAACATGAGCCCTGACCTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR TCA 90 bp | ACAGAGGTCAGGGCTCATGTTGTACTTGGATCTTTCTCCACTTGCCTTCTGCCCTTAGGGCAACAGCCATaGGAGCCGCTGGAACCCCGA | + |
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Preference number: 4 (lower is better) Translates to: TEVRAHVVLGSFSTCLLPLGQQP*EPLEPR Trigger: TCGGGGTTCCAGCGGCTCTCATGGCTGTTGCCCTAA...GGGCAGAAGGCAAGTGGAGAAAGATCCAAGTACAACATGAGCCCTGACCTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| 3UTR CAA 72 bp | TCTCCATCAGGGCTCTGTGGTGGAGTGTCCTGTCCCTaGGACAGAGGTCAGGGCTCATGTTGTACTTGGATC | + |
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Preference number: 4 (lower is better) Translates to: SPSGLCGGVSCP*DRGQGSCCTWI Trigger: GATCCAAGTACAACATGAGCCCTGACCTCTGTCCAAGGGACAGGACACTCCACCACAGAGCCCTGATGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR TCA 90 bp | AGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAACATGAGCTACTGTGGTaGCTCCTGGGGATCCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: RPAWSIEQVPGQSGLYREHELLW*LLGIQR Trigger: CCTCTGGATCCCCAGGAGTCACCACAGTAGCTCATG...TTCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR GCA 90 bp | ACAGAGGTCAGGGCTCATGTTGTACTTGGATCTTTCTCCACTTGCCTTCTGCCCCCCCAGCCACGAGTCTaGGATCAGAGCTCCAAGAAT | + |
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Preference number: 4 (lower is better) Translates to: TEVRAHVVLGSFSTCLLPPQPRV*DQSSKN Trigger: ATTCTTGGAGCTCTGATCGCAGACTCGTGGCTGGGG...GGGCAGAAGGCAAGTGGAGAAAGATCCAAGTACAACATGAGCCCTGACCTCTGT 53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR GCA 90 bp | AAGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAGTCCATCTGGAACCCTaGTGGTCAAACAAGGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: KASLVYRASSRAVRLIQRVHLEP*WSNKAQ Trigger: CTGGGCCTTGTTTGACCAGCAGGGTTCCAGATGGAC...TCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | AAGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGACCACCACAAAGGCCATaGACGCCAGGAACATCCCAA | + |
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Preference number: 4 (lower is better) Translates to: KASLVYRASSRAVRLIQRPPQRP*TPGTSQ Trigger: TTGGGATGTTCCTGGCGTCCATGGCCTTTGTGGTGG...TCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR TCA 90 bp | AAGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAAGCCGAGGAAGTTCCTaGAGTACAGAACCAGGAGTG | + |
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Preference number: 4 (lower is better) Translates to: KASLVYRASSRAVRLIQRSRGSS*STEPGV Trigger: CACTCCTGGTTCTGTACTTCAGGAACTTCCTCGGCT...TCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | ACAGAGGTCAGGGCTCATGTTGTACTTGGATCTTTCTCCACTTGCCTTCTGCCCCAGAGCTCCAAGAATTaGAGTCAGGTAGCAGAGGGC | + |
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Preference number: 4 (lower is better) Translates to: TEVRAHVVLGSFSTCLLPQSSKN*SQVAEG Trigger: GCCCTCTGCTACCTGACTCCAATTCTTGGAGCTCTG...GGGCAGAAGGCAAGTGGAGAAAGATCCAAGTACAACATGAGCCCTGACCTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | AAGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGATCAGGACTGCCATTGTaGTCGTGGTCTGTGAGGTCA | + |
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Preference number: 4 (lower is better) Translates to: KASLVYRASSRAVRLIQRSGLPL*SWSVRS Trigger: TGACCTCACAGACCACGACCACAATGGCAGTCCTGA...TCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR TCA 90 bp | ACAGAGGTCAGGGCTCATGTTGTACTTGGATCTTTCTCCACTTGCCTTCTGCCCTTGAGCTCACCGAGATaGCTGCTTGTCCAATCGTGT | + |
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Preference number: 4 (lower is better) Translates to: TEVRAHVVLGSFSTCLLPLSSPR*LLVQSC Trigger: ACACGATTGGACAAGCAGTCATCTCGGTGAGCTCAA...GGGCAGAAGGCAAGTGGAGAAAGATCCAAGTACAACATGAGCCCTGACCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR TCA 90 bp | AGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAATGTGAGGTCATTAATTaGGCTCACCGAGATGACTGC | + |
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Preference number: 4 (lower is better) Translates to: RPAWSIEQVPGQSGLYRECEVIN*AHRDDC Trigger: GCAGTCATCTCGGTGAGCTCAATTAATGACCTCACA...TTCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR TCA 90 bp | TTATTATTCTGGCTCACACTTCTGAGGTCTTCTCCATCAGGGCTCTGTGGTGGAAGAAGCCAGCCTGCCTaGAGCACGGACTTCATGTTA | + |
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Preference number: 4 (lower is better) Translates to: LLFWLTLLRSSPSGLCGGRSQPA*STDFML Trigger: TAACATGAAGTCCGTGCTTCAGGCAGGCTGGCTTCT...TCCACCACAGAGCCCTGATGGAGAAGACCTCAGAAGTGTGAGCCAGAATAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR GCA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATGAAGTGCCCCGCCCCTaGCACGATGAGCACAATGAT | + |
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Preference number: 4 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYEVPRP*HDEHND Trigger: ATCATTGTGCTCATCGTGGCAGGGGCGGGGCACTTC...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | AAGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAATGTTGCCCTGGGGCTaGAACTTCTTGTACATTCCA | + |
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Preference number: 4 (lower is better) Translates to: KASLVYRASSRAVRLIQRMLPWG*NFLYIP Trigger: TGGAATGTACAAGAAGTTCCAGCCCCAGGGCAACAT...TCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | AGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAATACTGTGGTGACTCCTaGGGATCCAGAGGAAGATAT | + |
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Preference number: 4 (lower is better) Translates to: RPAWSIEQVPGQSGLYREYCGDS*GSRGRY Trigger: ATATCTTCCTCTGGATCCCCAGGAGTCACCACAGTA...TTCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR TCA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATCAGACACACAGGGCTTaGTTCCTCCTGTACCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYQTHRA*FLLYQG Trigger: CCCTTGGTACAGGAGGAATCAAGCCCTGTGTGTCTG...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR GCA 90 bp | ACAGAGGTCAGGGCTCATGTTGTACTTGGATCTTTCTCCACTTGCCTTCTGCCCGTTGAAACCACATTTTaGAATGAGCGGGTACACCAC | + |
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Preference number: 4 (lower is better) Translates to: TEVRAHVVLGSFSTCLLPVETTF*NERVHH Trigger: GTGGTGTACCCGCTCATTGCAAAATGTGGTTTCAAC...GGGCAGAAGGCAAGTGGAGAAAGATCCAAGTACAACATGAGCCCTGACCTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR GCA 90 bp | ACAGAGGTCAGGGCTCATGTTGTACTTGGATCTTTCTCCACTTGCCTTCTGCCCTTATCGATTTCCACCTaGACAATTGCAGCCACCACA | + |
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Preference number: 4 (lower is better) Translates to: TEVRAHVVLGSFSTCLLPLSIST*TIAATT Trigger: TGTGGTGGCTGCAATTGTGCAGGTGGAAATCGATAA...GGGCAGAAGGCAAGTGGAGAAAGATCCAAGTACAACATGAGCCCTGACCTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | TTATTATTCTGGCTCACACTTCTGAGGTCTTCTCCATCAGGGCTCTGTGGTGGAAACCCCGAAGGCCAGTaGGTAACAAGCTTGTTGACT | + |
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Preference number: 4 (lower is better) Translates to: LLFWLTLLRSSPSGLCGGNPEGQ*VTSLLT Trigger: AGTCAACAAGCTTGTTACCCACTGGCCTTCGGGGTT...TCCACCACAGAGCCCTGATGGAGAAGACCTCAGAAGTGTGAGCCAGAATAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR GCA 90 bp | TTAGAAAACTGCTTTGTTATTATTCTGGCTCACACTTCTGAGGTCTTCTCCATCGCCCAGTCCAGCCAGTaGTCCCTCTTGGGATATGCC | + |
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Preference number: 4 (lower is better) Translates to: LENCFVIILAHTSEVFSIAQSSQ*SLLGYA Trigger: GGCATATCCCAAGAGGGAGCACTGGCTGGACTGGGC...GATGGAGAAGACCTCAGAAGTGTGAGCCAGAATAATAACAAAGCAGTTTTCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATCCCATGATGTTGCCCTaGGGCTGGAACTTCTTGTAC | + |
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Preference number: 4 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYPMMLP*GWNFLY Trigger: GTACAAGAAGTTCCAGCCCCAGGGCAACATCATGGG...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATCCACACGGTATTGACTaGGGTTCCACACTAGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYPHGID*GSTLEG Trigger: CCCTTCTAGTGTGGAACCCCAGTCAATACCGTGTGG...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | TTATTATTCTGGCTCACACTTCTGAGGTCTTCTCCATCAGGGCTCTGTGGTGGAGAGAAGGAAGTACTGTaGGATCTGCAGAGCCATGTT | + |
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Preference number: 4 (lower is better) Translates to: LLFWLTLLRSSPSGLCGGEKEVL*DLQSHV Trigger: AACATGGCTCTGCAGATCCCACAGTACTTCCTTCTC...TCCACCACAGAGCCCTGATGGAGAAGACCTCAGAAGTGTGAGCCAGAATAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR TCA 90 bp | TTATTATTCTGGCTCACACTTCTGAGGTCTTCTCCATCAGGGCTCTGTGGTGGAGCCGAAACCTGTTTTTaGTGGCAAAACCAATGCACT | + |
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Preference number: 4 (lower is better) Translates to: LLFWLTLLRSSPSGLCGGAETCF*WQNQCT Trigger: AGTGCATTGGTTTTGCCATCAAAAACAGGTTTCGGC...TCCACCACAGAGCCCTGATGGAGAAGACCTCAGAAGTGTGAGCCAGAATAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR TCA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATGACCATCTTAATCTGTaGGATGAGCCGCTCGTCGTA | + |
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Preference number: 4 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYDHLNL*DEPLVV Trigger: TACGACGAGCGGCTCATCTCACAGATTAAGATGGTC...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR GCA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATCTCCCTCTTGGGATATaGCTTACTTCGGTGCCGAAA | + |
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Preference number: 4 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYLPLGI*LTSVPK Trigger: TTTCGGCACCGAAGTAAGGCATATCCCAAGAGGGAG...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATCCAGAACATGGGGAGTaGGATGTACAGGAACATCAC | + |
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Preference number: 4 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYPEHGE*DVQEHH Trigger: GTGATGTTCCTGTACATCCCACTCCCCATGTTCTGG...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | TTATTATTCTGGCTCACACTTCTGAGGTCTTCTCCATCAGGGCTCTGTGGTGGACAATTTTCCCATTCATaGTCGTTGCTTGCAGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: LLFWLTLLRSSPSGLCGGQFSHS*SLLAVS Trigger: GGACACTGCAAGCAACGACCATGAATGGGAAAATTG...TCCACCACAGAGCCCTGATGGAGAAGACCTCAGAAGTGTGAGCCAGAATAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR TCA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATCAATCTCTGCTGGGTTaGTGTAGGTGTAGAATCGAG | + |
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Preference number: 4 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYQSLLG*CRCRIE Trigger: CTCGATTCTACACCTACATCAACCCAGCAGAGATTG...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR GCA 90 bp | ACAGAGGTCAGGGCTCATGTTGTACTTGGATCTTTCTCCACTTGCCTTCTGCCCTCTTGTACATTCCACTaGCAAGGACAAACACAATTA | + |
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Preference number: 4 (lower is better) Translates to: TEVRAHVVLGSFSTCLLPSCTFH*QGQTQL Trigger: TAATTGTGTTTGTCCTTGGCAGTGGAATGTACAAGA...GGGCAGAAGGCAAGTGGAGAAAGATCCAAGTACAACATGAGCCCTGACCTCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR GCA 90 bp | AGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAACGGCTGAATTTCAATTaGTCCAATTTTCCCATTCAT | + |
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Preference number: 4 (lower is better) Translates to: RPAWSIEQVPGQSGLYRERLNFN*SNFPIH Trigger: ATGAATGGGAAAATTGGAGCAATTGAAATTCAGCCG...TTCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR GCA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATAAGTACTGTGGGATCTaGAGAGCCATGTTCACAGTG | + |
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Preference number: 4 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYKYCGI*RAMFTV Trigger: CACTGTGAACATGGCTCTGCAGATCCCACAGTACTT...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATCTGCCATTGTGGTCGTaGTCTGTGAGGTCATTAATT | + |
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Preference number: 4 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYLPLWS*SVRSLI Trigger: AATTAATGACCTCACAGACCACGACCACAATGGCAG...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | TTAGAAAACTGCTTTGTTATTATTCTGGCTCACACTTCTGAGGTCTTCTCCATCGCCAGTGCTCCCTCTTaGGATATGCCTTACTTCGGT | + |
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Preference number: 4 (lower is better) Translates to: LENCFVIILAHTSEVFSIASAPS*DMPYFG Trigger: ACCGAAGTAAGGCATATCCCAAGAGGGAGCACTGGC...GATGGAGAAGACCTCAGAAGTGTGAGCCAGAATAATAACAAAGCAGTTTTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATGTTCTCCCCTTTCTCTaGCTTTTGGTTAAGACCATC | + |
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Preference number: 4 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYVLPFL*LLVKTI Trigger: GATGGTCTTAACCAAAAGCCAGAGAAAGGGGAGAAC...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR TCA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATACCTTAATTTGGACTTaGTTTCCACCAGGGAAGACT | + |
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Preference number: 4 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYTLIWT*FPPGKT Trigger: AGTCTTCCCTGGTGGAAATCAAGTCCAAATTAAGGT...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR GCA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATATCCTCATCAAACTGTaGTTCAATCTCTGCTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYILIKL*FNLCWV Trigger: AACCCAGCAGAGATTGAAGCACAGTTTGATGAGGAT...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | TTAGAAAACTGCTTTGTTATTATTCTGGCTCACACTTCTGAGGTCTTCTCCATCTTGGTGCCACCGCCGTaGTGTTTATTGTGTACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LENCFVIILAHTSEVFSILVPPP*CLLCTA Trigger: AGCAGTACACAATAAACACCACGGCGGTGGCACCAA...GATGGAGAAGACCTCAGAAGTGTGAGCCAGAATAATAACAAAGCAGTTTTCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS-3UTR TCA 90 bp | TTAGAAAACTGCTTTGTTATTATTCTGGCTCACACTTCTGAGGTCTTCTCCATCGACAACCAGAAGCAATaGGGCAAACAGAATGTACTC | + |
|
Preference number: 4 (lower is better) Translates to: LENCFVIILAHTSEVFSIDNQKQ*GKQNVL Trigger: GAGTACATTCTGTTTGCCTCATTGCTTCTGGTTGTC...GATGGAGAAGACCTCAGAAGTGTGAGCCAGAATAATAACAAAGCAGTTTTCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | TTAGAAAACTGCTTTGTTATTATTCTGGCTCACACTTCTGAGGTCTTCTCCATCCCATGTTCACAGTGTTaGGTGGGATGTCTTCAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LENCFVIILAHTSEVFSIPCSQC*VGCLQI Trigger: AATTTGAAGACATCCCACCCAACACTGTGAACATGG...GATGGAGAAGACCTCAGAAGTGTGAGCCAGAATAATAACAAAGCAGTTTTCTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CCA 90 bp | TTAGAAAACTGCTTTGTTATTATTCTGGCTCACACTTCTGAGGTCTTCTCCATCCCTTTCTCTGGCTTTTaGTTAAGACCATCTTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: LENCFVIILAHTSEVFSIPFSGF*LRPSFT Trigger: GGTAAAAGATGGTCTTAACCAAAAGCCAGAGAAAGG...GATGGAGAAGACCTCAGAAGTGTGAGCCAGAATAATAACAAAGCAGTTTTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS CCA 90 bp | TGTGACAGAGAAGACCACCTCGCCGCAGGTGAGAAGGAAGTACTGTaGGATCTGCAGAGCCATGTTCACAGTGTTGGGTGGGATGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: CDREDHLAAGEKEVL*DLQSHVHSVGWDVF Trigger: GAAGACATCCCACCCAACACTGTGAACATGGCTCTGCAGATCCCACAGTACTTCCTTCTCACCTGCGGCGAGGTGGTCTTCTCTGTCACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS GCA 90 bp | GCCCAGTCCAGCCAGTGCTCCCTCTTGGGATATGCCTTACTTCGGTaGCGAAACCTGTTTTTGATGGCAAAACCAATGCACTTGGCCACT | + |
|
Preference number: 5 (lower is better) Translates to: AQSSQCSLLGYALLR*RNLFLMAKPMHLAT Trigger: AGTGGCCAAGTGCATTGGTTTTGCCATCAAAAACAGGTTTCGGCACCGAAGTAAGGCATATCCCAAGAGGGAGCACTGGCTGGACTGGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS GCA 90 bp | GAGATGAGCCGCTCGTCGTATTTCTCTTTAGCCCAGTCCAGCCAGTaGTCCCTCTTGGGATATGCCTTACTTCGGTGCCGAAACCTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: EMSRSSYFSLAQSSQ*SLLGYALLRCRNLF Trigger: AAACAGGTTTCGGCACCGAAGTAAGGCATATCCCAAGAGGGAGCACTGGCTGGACTGGGCTAAAGAGAAATACGACGAGCGGCTCATCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS GCA 90 bp | GAGAAGACCACCTCGCCGCAGGTGAGAAGGAAGTACTGTGGGATCTaGAGAGCCATGTTCACAGTGTTGGGTGGGATGTCTTCAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: EKTTSPQVRRKYCGI*RAMFTVLGGMSSNS Trigger: GGAATTTGAAGACATCCCACCCAACACTGTGAACATGGCTCTGCAGATCCCACAGTACTTCCTTCTCACCTGCGGCGAGGTGGTCTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CCA 90 bp | CTTGAACTTCCCCAGCCACGAGTCTGCGATCAGAGCTCCAAGAATTaGAGTCAGGTAGCAGAGGGCAACGAACGTATGGTAAATGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: LELPQPRVCDQSSKN*SQVAEGNERMVNGR Trigger: ACGGCCATTTACCATACGTTCGTTGCCCTCTGCTACCTGACTCCAATTCTTGGAGCTCTGATCGCAGACTCGTGGCTGGGGAAGTTCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS CCA 90 bp | AGTGCTACGTGCACGGGAAGGCTGTCAGGACTGCCATTGTGGTCGTaGTCTGTGAGGTCATTAATTGAGCTCACCGAGATGACTGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SATCTGRLSGLPLWS*SVRSLIELTEMTAC Trigger: ACAAGCAGTCATCTCGGTGAGCTCAATTAATGACCTCACAGACCACGACCACAATGGCAGTCCTGACAGCCTTCCCGTGCACGTAGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS CCA 90 bp | ATGGACAGTGCTACGTGCACGGGAAGGCTGTCAGGACTGCCATTGTaGTCGTGGTCTGTGAGGTCATTAATTGAGCTCACCGAGATGACT | + |
|
Preference number: 5 (lower is better) Translates to: MDSATCTGRLSGLPL*SWSVRSLIELTEMT Trigger: AGTCATCTCGGTGAGCTCAATTAATGACCTCACAGACCACGACCACAATGGCAGTCCTGACAGCCTTCCCGTGCACGTAGCACTGTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS-3UTR CAA 90 bp | ACAGAGGTCAGGGCTCATGTTGTACTTGGATCTTTCTCCACTTGCCTTCTGCCCAGCCAGTGCTCCCTCTaGGGATATGCCTTACTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TEVRAHVVLGSFSTCLLPSQCSL*GYALLR Trigger: CCGAAGTAAGGCATATCCCAAGAGGGAGCACTGGCT...GGGCAGAAGGCAAGTGGAGAAAGATCCAAGTACAACATGAGCCCTGACCTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | AGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAAAATCAGTTAGACAGGTaGGTGCCACCGCCGTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: RPAWSIEQVPGQSGLYRENQLDR*VPPPWC Trigger: ACACCACGGCGGTGGCACCAACCTGTCTAACTGATT...TTCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS TCA 90 bp | GCTGTCAGGACTGCCATTGTGGTCGTGGTCTGTGAGGTCATTAATTaGGCTCACCGAGATGACTGCTTGTCCAATCGTGTAGACGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: AVRTAIVVVVCEVIN*AHRDDCLSNRVDDG Trigger: TCCATCGTCTACACGATTGGACAAGCAGTCATCTCGGTGAGCTCAATTAATGACCTCACAGACCACGACCACAATGGCAGTCCTGACAGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS TCA 90 bp | GAATCGAGCCATGATGGCGAATATCACGCAGACAACCAGAAGCAATaGGGCAAACAGAATGTACTCAGCCCACTGTTTGGGGAAGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: ESSHDGEYHADNQKQ*GKQNVLSPLFGEVP Trigger: GGGCACTTCCCCAAACAGTGGGCTGAGTACATTCTGTTTGCCTCATTGCTTCTGGTTGTCTGCGTGATATTCGCCATCATGGCTCGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS GCA 90 bp | ACCAGGGAAGACTGGAAGAGTTTTATCGATTTCCACCTGCACAATTaGAGCCACCACAAAGGCCATGGACGCCAGGAACATCCCAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: TREDWKSFIDFHLHN*SHHKGHGRQEHPNS Trigger: ACTGTTGGGATGTTCCTGGCGTCCATGGCCTTTGTGGTGGCTGCAATTGTGCAGGTGGAAATCGATAAAACTCTTCCAGTCTTCCCTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS CCA 90 bp | AAGGAAGTACTGTGGGATCTGCAGAGCCATGTTCACAGTGTTGGGTaGGATGTCTTCAAATTCCTTCACTTCCAGGCAGCCATCACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: KEVLWDLQSHVHSVG*DVFKFLHFQAAITR Trigger: GCGAGTGATGGCTGCCTGGAAGTGAAGGAATTTGAAGACATCCCACCCAACACTGTGAACATGGCTCTGCAGATCCCACAGTACTTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS-3UTR CAA 90 bp | AGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAAGCAAAACCAATGCACTaGGCCACTTTGCCCATGATG | + |
|
Preference number: 5 (lower is better) Translates to: RPAWSIEQVPGQSGLYREAKPMH*ATLPMM Trigger: CATCATGGGCAAAGTGGCCAAGTGCATTGGTTTTGC...TTCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS GCA 90 bp | GTCCGGCTGAATTTCAATTGCTCCAATTTTCCCATTCATGGTCGTTaGTTGCAGTGTCCATCTGGAACCCTGCTGGTCAAACAAGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VRLNFNCSNFPIHGR*LQCPSGTLLVKQGP Trigger: TGGGCCTTGTTTGACCAGCAGGGTTCCAGATGGACACTGCAAGCAACGACCATGAATGGGAAAATTGGAGCAATTGAAATTCAGCCGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS CCA 90 bp | ATGGCAAAACCAATGCACTTGGCCACTTTGCCCATGATGTTGCCCTaGGGCTGGAACTTCTTGTACATTCCACTGCCAAGGACAAACACA | + |
|
Preference number: 5 (lower is better) Translates to: MAKPMHLATLPMMLP*GWNFLYIPLPRTNT Trigger: TGTGTTTGTCCTTGGCAGTGGAATGTACAAGAAGTTCCAGCCCCAGGGCAACATCATGGGCAAAGTGGCCAAGTGCATTGGTTTTGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | TTATTATTCTGGCTCACACTTCTGAGGTCTTCTCCATCAGGGCTCTGTGGTGGATCAGAGCTCCAAGAATaGGAGTCAGGTAGCAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLFWLTLLRSSPSGLCGGSELQE*ESGSRG Trigger: CCCTCTGCTACCTGACTCCAATTCTTGGAGCTCTGA...TCCACCACAGAGCCCTGATGGAGAAGACCTCAGAAGTGTGAGCCAGAATAATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | AAGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAAGTGAAACAATTGTCTaGAACTTCCCCAGCCACGAG | + |
|
Preference number: 5 (lower is better) Translates to: KASLVYRASSRAVRLIQRSETIV*NFPSHE Trigger: CTCGTGGCTGGGGAAGTTCAAGACAATTGTTTCACT...TCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | AAGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAGCCATGTTCACAGTGTaGGGTGGGATGTCTTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: KASLVYRASSRAVRLIQRAMFTV*GGMSSN Trigger: ATTTGAAGACATCCCACCCAACACTGTGAACATGGC...TCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | ACAGAGGTCAGGGCTCATGTTGTACTTGGATCTTTCTCCACTTGCCTTCTGCCCATGAGCACAATGATATaGCCGACCGCCACAGTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: TEVRAHVVLGSFSTCLLPMSTMI*PTATVR Trigger: TCTAACTGTGGCGGTCGGCAATATCATTGTGCTCAT...GGGCAGAAGGCAAGTGGAGAAAGATCCAAGTACAACATGAGCCCTGACCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS CCA 90 bp | AAACCAATGCACTTGGCCACTTTGCCCATGATGTTGCCCTGGGGCTaGAACTTCTTGTACATTCCACTGCCAAGGACAAACACAATTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KPMHLATLPMMLPWG*NFLYIPLPRTNTIR Trigger: CCTAATTGTGTTTGTCCTTGGCAGTGGAATGTACAAGAAGTTCCAGCCCCAGGGCAACATCATGGGCAAAGTGGCCAAGTGCATTGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATGCAGACACACAGGGCTaGATTCCTCCTGTACCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYADTQG*IPPVPR Trigger: CCTTGGTACAGGAGGAATCAAGCCCTGTGTGTCTGC...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | TTATTATTCTGGCTCACACTTCTGAGGTCTTCTCCATCAGGGCTCTGTGGTGGACAGTGGGTAACAAGCTaGTTGACTGTGGATTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LLFWLTLLRSSPSGLCGGQWVTS*LTVDSA Trigger: TGCGGAATCCACAGTCAACAAGCTTGTTACCCACTG...TCCACCACAGAGCCCTGATGGAGAAGACCTCAGAAGTGTGAGCCAGAATAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATACTTTGCCCATGATGTaGCCCTGGGGCTGGAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYTLPMM*PWGWNF Trigger: GAAGTTCCAGCCCCAGGGCAACATCATGGGCAAAGT...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATATGCACTTGGCCACTTaGCCCATGATGTTGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYMHLAT*PMMLPW Trigger: CCAGGGCAACATCATGGGCAAAGTGGCCAAGTGCAT...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | AAGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGATGCCGAAACCTGTTTTaGATGGCAAAACCAATGCAC | + |
|
Preference number: 5 (lower is better) Translates to: KASLVYRASSRAVRLIQRCRNLF*MAKPMH Trigger: GTGCATTGGTTTTGCCATCAAAAACAGGTTTCGGCA...TCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | AAGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAGACCTTAATTTGGACTaGATTTCCACCAGGGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KASLVYRASSRAVRLIQRDLNLD*ISTRED Trigger: GTCTTCCCTGGTGGAAATCAAGTCCAAATTAAGGTC...TCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | AGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAATGCACGGTCATGTTATaGTTTCCGATGTTCAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: RPAWSIEQVPGQSGLYRECTVML*FPMFKT Trigger: GGTCTTGAACATCGGAAACAATAACATGACCGTGCA...TTCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | AGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAAATCTCGTTAAGGGTGTaGACAAACCTGATTCCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RPAWSIEQVPGQSGLYREISLRV*TNLIPF Trigger: GAACGGAATCAGGTTTGTCAACACCCTTAACGAGAT...TTCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS GCA 90 bp | CAAGATGGCATTCACCGTCTGCATCTGGTCCGGCTGAATTTCAATTaGTCCAATTTTCCCATTCATGGTCGTTGCTTGCAGTGTCCATCT | + |
|
Preference number: 5 (lower is better) Translates to: QDGIHRLHLVRLNFN*SNFPIHGRCLQCPS Trigger: AGATGGACACTGCAAGCAACGACCATGAATGGGAAAATTGGAGCAATTGAAATTCAGCCGGACCAGATGCAGACGGTGAATGCCATCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | AGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAACCGGCTGAATTTCAATaGCTCCAATTTTCCCATTCA | + |
|
Preference number: 5 (lower is better) Translates to: RPAWSIEQVPGQSGLYREPAEFQ*LQFSHS Trigger: TGAATGGGAAAATTGGAGCAATTGAAATTCAGCCGG...TTCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | AGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGAACCCTTTCTCTGGCTTTaGGTTAAGACCATCTTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: RPAWSIEQVPGQSGLYREPFLWL*VKTIFY Trigger: GTAAAAGATGGTCTTAACCAAAAGCCAGAGAAAGGG...TTCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | ACAGAGGTCAGGGCTCATGTTGTACTTGGATCTTTCTCCACTTGCCTTCTGCCCCTTTCACAGAATTCATaGACCACGATGAAGAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: TEVRAHVVLGSFSTCLLPLSQNS*TTMKKM Trigger: CATCTTCTTCATCGTGGTCAATGAATTCTGTGAAAG...GGGCAGAAGGCAAGTGGAGAAAGATCCAAGTACAACATGAGCCCTGACCTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | TTAGAAAACTGCTTTGTTATTATTCTGGCTCACACTTCTGAGGTCTTCTCCATCCTGTCAGGACTGCCATaGTGGTCGTGGTCTGTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LENCFVIILAHTSEVFSILSGLP*WSWSVR Trigger: CCTCACAGACCACGACCACAATGGCAGTCCTGACAG...GATGGAGAAGACCTCAGAAGTGTGAGCCAGAATAATAACAAAGCAGTTTTCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS-3UTR CAA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATTGGGTAACAAGCTTGTaGACTGTGGATTCCGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYWVTSL*TVDSAL Trigger: CAGTGCGGAATCCACAGTCAACAAGCTTGTTACCCA...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS TCA 90 bp | ATGATGACAATCAAGATGGCATTCACCGTCTGCATCTGGTCCGGCTaGATTTCAATTGCTCCAATTTTCCCATTCATGGTCGTTGCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: MMTIKMAFTVCIWSG*ISIAPIFPFMVVAC Trigger: GCAAGCAACGACCATGAATGGGAAAATTGGAGCAATTGAAATTCAGCCGGACCAGATGCAGACGGTGAATGCCATCTTGATTGTCATCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CCA 90 bp | GCCCTTTTTCTTCTCATCCTCATCAAACTGTGCTTCAATCTCTGCTaGGTTGATGTAGGTGTAGAATCGAGCCATGATGGCGAATATCAC | + |
|
Preference number: 5 (lower is better) Translates to: ALFLLILIKLCFNLC*VDVGVESSHDGEYH Trigger: GTGATATTCGCCATCATGGCTCGATTCTACACCTACATCAACCCAGCAGAGATTGAAGCACAGTTTGATGAGGATGAGAAGAAAAAGGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS-3UTR CAA 90 bp | AAGGCCAGCCTGGTCTATAGAGCAAGTTCCAGGGCAGTCAGGCTTATACAGAGACTGCCAAAGTCAAGGTaGGAAGATTTAAAATCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KASLVYRASSRAVRLIQRLPKSR*EDLKSV Trigger: AACTGATTTTAAATCTTCCAACCTTGACTTTGGCAG...TCTCTGTATAAGCCTGACTGCCCTGGAACTTGCTCTATAGACCAGGCTGGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS-3UTR CAA 90 bp | TTAGAAAACTGCTTTGTTATTATTCTGGCTCACACTTCTGAGGTCTTCTCCATCTGGGGCTGGAACTTCTaGTACATTCCACTGCCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LENCFVIILAHTSEVFSIWGWNF*YIPLPR Trigger: CCTTGGCAGTGGAATGTACAAGAAGTTCCAGCCCCA...GATGGAGAAGACCTCAGAAGTGTGAGCCAGAATAATAACAAAGCAGTTTTCTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS GCA 90 bp | TATGCCCTTTTTCTTCTCATCCTCATCAAACTGTGCTTCAATCTCTaGTGGGTTGATGTAGGTGTAGAATCGAGCCATGATGGCGAATAT | + |
|
Preference number: 5 (lower is better) Translates to: YALFLLILIKLCFNL*WVDVGVESSHDGEY Trigger: ATATTCGCCATCATGGCTCGATTCTACACCTACATCAACCCAGCAGAGATTGAAGCACAGTTTGATGAGGATGAGAAGAAAAAGGGCATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS GCA 90 bp | GTTTTCCTTTCCTATGCCCTTTTTCTTCTCATCCTCATCAAACTGTaGTTCAATCTCTGCTGGGTTGATGTAGGTGTAGAATCGAGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: VFLSYALFLLILIKL*FNLCWVDVGVESSH Trigger: ATGGCTCGATTCTACACCTACATCAACCCAGCAGAGATTGAAGCACAGTTTGATGAGGATGAGAAGAAAAAGGGCATAGGAAAGGAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCCCCTAGAGTTTCAGGTTCACAGCTGTTGGTTAGAAAACTGCTTTGTTATACTTTCCCACTCATTTaGATGGTGACCATCTCGTTA | + |
|
Preference number: 5 (lower is better) Translates to: GSPRVSGSQLLVRKLLCYTFPLI*MVTISL Trigger: TAACGAGATGGTCACCATCAAAATGAGTGGGAAAGT...ATAACAAAGCAGTTTTCTAACCAACAGCTGTGAACCTGAAACTCTAGGGGAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS TCA 90 bp | ACGGTCATGTTATTGTTTCCGATGTTCAAGACCTTAATTTGGACTTaGTTTCCACCAGGGAAGACTGGAAGAGTTTTATCGATTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: TVMLLFPMFKTLIWT*FPPGKTGRVLSIST Trigger: GGTGGAAATCGATAAAACTCTTCCAGTCTTCCCTGGTGGAAATCAAGTCCAAATTAAGGTCTTGAACATCGGAAACAATAACATGACCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS GCA 72 bp | GCTATCAGGGCCAGGCCAACCATGGACAGTGCTACGTaGACGGGAAGGCTGTCAGGACTGCCATTGTGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: AIRARPTMDSAT*TGRLSGLPLWS Trigger: CGACCACAATGGCAGTCCTGACAGCCTTCCCGTGCACGTAGCACTGTCCATGGTTGGCCTGGCCCTGATAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CCA 72 bp | CTCCTGTACCAAGGGCTATCAGGGCCAGGCCAACCATaGACAGTGCTACGTGCACGGGAAGGCTGTCAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: LLYQGLSGPGQP*TVLRAREGCQD Trigger: GTCCTGACAGCCTTCCCGTGCACGTAGCACTGTCCATGGTTGGCCTGGCCCTGATAGCCCTTGGTACAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS TCA 72 bp | CAAACTGATCGCCACCAAACGCAGACACACAGGGCTTaGTTCCTCCTGTACCAAGGGCTATCAGGGCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: QTDRHQTQTHRA*FLLYQGLSGPG Trigger: GCCTGGCCCTGATAGCCCTTGGTACAGGAGGAATCAAGCCCTGTGTGTCTGCGTTTGGTGGCGATCAGTTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS TCA 72 bp | CACTGCCAAGGACAAACACAATTAGGGCAACAGCCATaGGAGCCGCTGGAACCCCGAAGGCCAGTGGGTAAC | + |
|
Preference number: 6 (lower is better) Translates to: HCQGQTQLGQQP*EPLEPRRPVGN Trigger: GTTACCCACTGGCCTTCGGGGTTCCAGCGGCTCTCATGGCTGTTGCCCTAATTGTGTTTGTCCTTGGCAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CCA 72 bp | AACAGCCATGAGAGCCGCTGGAACCCCGAAGGCCAGTaGGTAACAAGCTTGTTGACTGTGGATTCCGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: NSHESRWNPEGQ*VTSLLTVDSAL Trigger: CAGTGCGGAATCCACAGTCAACAAGCTTGTTACCCACTGGCCTTCGGGGTTCCAGCGGCTCTCATGGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CCA 72 bp | GAAGACCACCTCGCCGCAGGTGAGAAGGAAGTACTGTaGGATCTGCAGAGCCATGTTCACAGTGTTGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: EDHLAAGEKEVL*DLQSHVHSVGW Trigger: CCACCCAACACTGTGAACATGGCTCTGCAGATCCCACAGTACTTCCTTCTCACCTGCGGCGAGGTGGTCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS TCA 72 bp | ATATTGCCGACCGCCACAGTTAGAAGCCAGCCTGCCTaGAGCACGGACTTCATGTTAGACGGAGCCTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: ILPTATVRSQPA*STDFMLDGAWE Trigger: TTCCCAGGCTCCGTCTAACATGAAGTCCGTGCTTCAGGCAGGCTGGCTTCTAACTGTGGCGGTCGGCAATAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS GCA 72 bp | CGCTCGTCGTATTTCTCTTTAGCCCAGTCCAGCCAGTaGTCCCTCTTGGGATATGCCTTACTTCGGTGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: RSSYFSLAQSSQ*SLLGYALLRCR Trigger: TCGGCACCGAAGTAAGGCATATCCCAAGAGGGAGCACTGGCTGGACTGGGCTAAAGAGAAATACGACGAGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CCA 72 bp | GAGTCAGGTAGCAGAGGGCAACGAACGTATGGTAAATaGCCGTGGAGAGATTGTCGTCCCAGCCGAGGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ESGSRGQRTYGK*PWRDCRPSRGS Trigger: ACTTCCTCGGCTGGGACGACAATCTCTCCACGGCCATTTACCATACGTTCGTTGCCCTCTGCTACCTGACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CCA 72 bp | CCCCAGCCACGAGTCTGCGATCAGAGCTCCAAGAATTaGAGTCAGGTAGCAGAGGGCAACGAACGTATGGTA | + |
|
Preference number: 6 (lower is better) Translates to: PQPRVCDQSSKN*SQVAEGNERMV Trigger: TACCATACGTTCGTTGCCCTCTGCTACCTGACTCCAATTCTTGGAGCTCTGATCGCAGACTCGTGGCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CCA 72 bp | GCTACGTGCACGGGAAGGCTGTCAGGACTGCCATTGTaGTCGTGGTCTGTGAGGTCATTAATTGAGCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: ATCTGRLSGLPL*SWSVRSLIELT Trigger: GGTGAGCTCAATTAATGACCTCACAGACCACGACCACAATGGCAGTCCTGACAGCCTTCCCGTGCACGTAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 72 bp | TCCCCAGCCACGAGTCTGCGATCAGAGCTCCAAGAATaGGAGTCAGGTAGCAGAGGGCAACGAACGTATGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPATSLRSELQE*ESGSRGQRTYG Trigger: ACCATACGTTCGTTGCCCTCTGCTACCTGACTCCAATTCTTGGAGCTCTGATCGCAGACTCGTGGCTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 72 bp | AGCCGCTGGAACCCCGAAGGCCAGTGGGTAACAAGCTaGTTGACTGTGGATTCCGCACTGTTGAACTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: SRWNPEGQWVTS*LTVDSALLNSE Trigger: CTCAGAGTTCAACAGTGCGGAATCCACAGTCAACAAGCTTGTTACCCACTGGCCTTCGGGGTTCCAGCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 90 bp | ACCATGGACAGTGCTACGTGCACGGGAAGGCTGTCAGGACTGCCATaGTGGTCGTGGTCTGTGAGGTCATTAATTGAGCTCACCGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: TMDSATCTGRLSGLP*WSWSVRSLIELTEM Trigger: CATCTCGGTGAGCTCAATTAATGACCTCACAGACCACGACCACAATGGCAGTCCTGACAGCCTTCCCGTGCACGTAGCACTGTCCATGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 90 bp | AGCCATGAGAGCCGCTGGAACCCCGAAGGCCAGTGGGTAACAAGCTaGTTGACTGTGGATTCCGCACTGTTGAACTCTGAGTATGGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: SHESRWNPEGQWVTS*LTVDSALLNSEYGS Trigger: ACTCCCATACTCAGAGTTCAACAGTGCGGAATCCACAGTCAACAAGCTTGTTACCCACTGGCCTTCGGGGTTCCAGCGGCTCTCATGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS GCA 72 bp | GCAAACAGAATGTACTCAGCCCACTGTTTGGGGAAGTaGCCCGCCCCTGCCACGATGAGCACAATGATATTG | + |
|
Preference number: 6 (lower is better) Translates to: ANRMYSAHCLGK*PAPATMSTMIL Trigger: CAATATCATTGTGCTCATCGTGGCAGGGGCGGGGCACTTCCCCAAACAGTGGGCTGAGTACATTCTGTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CCA 72 bp | TGCACGGGAAGGCTGTCAGGACTGCCATTGTGGTCGTaGTCTGTGAGGTCATTAATTGAGCTCACCGAGATG | + |
|
Preference number: 6 (lower is better) Translates to: CTGRLSGLPLWS*SVRSLIELTEM Trigger: CATCTCGGTGAGCTCAATTAATGACCTCACAGACCACGACCACAATGGCAGTCCTGACAGCCTTCCCGTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CCA 72 bp | CCAATGCACTTGGCCACTTTGCCCATGATGTTGCCCTaGGGCTGGAACTTCTTGTACATTCCACTGCCAAGG | + |
|
Preference number: 6 (lower is better) Translates to: PMHLATLPMMLP*GWNFLYIPLPR Trigger: CCTTGGCAGTGGAATGTACAAGAAGTTCCAGCCCCAGGGCAACATCATGGGCAAAGTGGCCAAGTGCATTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 72 bp | AGTGCTACGTGCACGGGAAGGCTGTCAGGACTGCCATaGTGGTCGTGGTCTGTGAGGTCATTAATTGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SATCTGRLSGLP*WSWSVRSLIEL Trigger: GAGCTCAATTAATGACCTCACAGACCACGACCACAATGGCAGTCCTGACAGCCTTCCCGTGCACGTAGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 90 bp | CATGAGAGCCGCTGGAACCCCGAAGGCCAGTGGGTAACAAGCTTGTaGACTGTGGATTCCGCACTGTTGAACTCTGAGTATGGGAGTGAT | + |
|
Preference number: 6 (lower is better) Translates to: HESRWNPEGQWVTSL*TVDSALLNSEYGSD Trigger: ATCACTCCCATACTCAGAGTTCAACAGTGCGGAATCCACAGTCAACAAGCTTGTTACCCACTGGCCTTCGGGGTTCCAGCGGCTCTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CCA 72 bp | CACTTGGCCACTTTGCCCATGATGTTGCCCTGGGGCTaGAACTTCTTGTACATTCCACTGCCAAGGACAAAC | + |
|
Preference number: 6 (lower is better) Translates to: HLATLPMMLPWG*NFLYIPLPRTN Trigger: GTTTGTCCTTGGCAGTGGAATGTACAAGAAGTTCCAGCCCCAGGGCAACATCATGGGCAAAGTGGCCAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CCA 72 bp | CTGTGGGATCTGCAGAGCCATGTTCACAGTGTTGGGTaGGATGTCTTCAAATTCCTTCACTTCCAGGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: LWDLQSHVHSVG*DVFKFLHFQAA Trigger: GGCTGCCTGGAAGTGAAGGAATTTGAAGACATCCCACCCAACACTGTGAACATGGCTCTGCAGATCCCACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 72 bp | CGCTGGAACCCCGAAGGCCAGTGGGTAACAAGCTTGTaGACTGTGGATTCCGCACTGTTGAACTCTGAGTAT | + |
|
Preference number: 6 (lower is better) Translates to: RWNPEGQWVTSL*TVDSALLNSEY Trigger: ATACTCAGAGTTCAACAGTGCGGAATCCACAGTCAACAAGCTTGTTACCCACTGGCCTTCGGGGTTCCAGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 90 bp | GAAGGCCAGTGGGTAACAAGCTTGTTGACTGTGGATTCCGCACTGTaGAACTCTGAGTATGGGAGTGATGATCGTGGAGAGCAGGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: EGQWVTSLLTVDSAL*NSEYGSDDRGEQAS Trigger: GGAAGCCTGCTCTCCACGATCATCACTCCCATACTCAGAGTTCAACAGTGCGGAATCCACAGTCAACAAGCTTGTTACCCACTGGCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS CAA 90 bp | CGCTCGTCGTATTTCTCTTTAGCCCAGTCCAGCCAGTGCTCCCTCTaGGGATATGCCTTACTTCGGTGCCGAAACCTGTTTTTGATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSSYFSLAQSSQCSL*GYALLRCRNLFLMA Trigger: TGCCATCAAAAACAGGTTTCGGCACCGAAGTAAGGCATATCCCAAGAGGGAGCACTGGCTGGACTGGGCTAAAGAGAAATACGACGAGCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 90 bp | CACCAGGGAAGACTGGAAGAGTTTTATCGATTTCCACCTGCACAATaGCAGCCACCACAAAGGCCATGGACGCCAGGAACATCCCAACAG | + |
|
Preference number: 6 (lower is better) Translates to: HQGRLEEFYRFPPAQ*QPPQRPWTPGTSQQ Trigger: CTGTTGGGATGTTCCTGGCGTCCATGGCCTTTGTGGTGGCTGCAATTGTGCAGGTGGAAATCGATAAAACTCTTCCAGTCTTCCCTGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS TCA 72 bp | GCCGGTGACCCTGCTCAAAATCATGAGCTACTGTGGTaGCTCCTGGGGATCCAGAGGAAGATATGTTTATGC | + |
|
Preference number: 6 (lower is better) Translates to: AGDPAQNHELLW*LLGIQRKICLC Trigger: GCATAAACATATCTTCCTCTGGATCCCCAGGAGTCACCACAGTAGCTCATGATTTTGAGCAGGGTCACCGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 72 bp | GCAAAACCAATGCACTTGGCCACTTTGCCCATGATGTaGCCCTGGGGCTGGAACTTCTTGTACATTCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: AKPMHLATLPMM*PWGWNFLYIPL Trigger: CAGTGGAATGTACAAGAAGTTCCAGCCCCAGGGCAACATCATGGGCAAAGTGGCCAAGTGCATTGGTTTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 72 bp | CAGTTAGACAGGTTGGTGCCACCGCCGTGGTGTTTATaGTGTACTGCTTTTCGCCAGAAGGGAAGAACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: QLDRLVPPPWCL*CTAFRQKGRTG Trigger: ACCAGTTCTTCCCTTCTGGCGAAAAGCAGTACACAATAAACACCACGGCGGTGGCACCAACCTGTCTAACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 90 bp | GTGAGAAGGAAGTACTGTGGGATCTGCAGAGCCATGTTCACAGTGTaGGGTGGGATGTCTTCAAATTCCTTCACTTCCAGGCAGCCATCA | + |
|
Preference number: 6 (lower is better) Translates to: VRRKYCGICRAMFTV*GGMSSNSFTSRQPS Trigger: TGATGGCTGCCTGGAAGTGAAGGAATTTGAAGACATCCCACCCAACACTGTGAACATGGCTCTGCAGATCCCACAGTACTTCCTTCTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS GCA 72 bp | AGCCAGTGCTCCCTCTTGGGATATGCCTTACTTCGGTaGCGAAACCTGTTTTTGATGGCAAAACCAATGCAC | + |
|
Preference number: 6 (lower is better) Translates to: SQCSLLGYALLR*RNLFLMAKPMH Trigger: GTGCATTGGTTTTGCCATCAAAAACAGGTTTCGGCACCGAAGTAAGGCATATCCCAAGAGGGAGCACTGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS GCA 72 bp | GACTGGAAGAGTTTTATCGATTTCCACCTGCACAATTaGAGCCACCACAAAGGCCATGGACGCCAGGAACAT | + |
|
Preference number: 6 (lower is better) Translates to: DWKSFIDFHLHN*SHHKGHGRQEH Trigger: ATGTTCCTGGCGTCCATGGCCTTTGTGGTGGCTGCAATTGTGCAGGTGGAAATCGATAAAACTCTTCCAGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CCA 72 bp | AGTACTGTGGGATCTGCAGAGCCATGTTCACAGTGTTaGGTGGGATGTCTTCAAATTCCTTCACTTCCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: STVGSAEPCSQC*VGCLQIPSLPG Trigger: GCCTGGAAGTGAAGGAATTTGAAGACATCCCACCCAACACTGTGAACATGGCTCTGCAGATCCCACAGTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS CAA 72 bp | TATTTCTCTTTAGCCCAGTCCAGCCAGTGCTCCCTCTaGGGATATGCCTTACTTCGGTGCCGAAACCTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: YFSLAQSSQCSL*GYALLRCRNLF Trigger: AAACAGGTTTCGGCACCGAAGTAAGGCATATCCCAAGAGGGAGCACTGGCTGGACTGGGCTAAAGAGAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 90 bp | CGGCTGAATTTCAATTGCTCCAATTTTCCCATTCATGGTCGTTGCTaGCAGTGTCCATCTGGAACCCTGCTGGTCAAACAAGGCCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RLNFNCSNFPIHGRC*QCPSGTLLVKQGPE Trigger: TTCTGGGCCTTGTTTGACCAGCAGGGTTCCAGATGGACACTGCAAGCAACGACCATGAATGGGAAAATTGGAGCAATTGAAATTCAGCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS TCA 72 bp | CAATCGTGTAGACGATGGATAGTGAAACAATTGTCTTaGACTTCCCCAGCCACGAGTCTGCGATCAGAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QSCRRWIVKQLS*TSPATSLRSEL Trigger: GAGCTCTGATCGCAGACTCGTGGCTGGGGAAGTTCAAGACAATTGTTTCACTATCCATCGTCTACACGATTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS TCA 72 bp | TGGGATATGCCTTACTTCGGTGCCGAAACCTGTTTTTaGTGGCAAAACCAATGCACTTGGCCACTTTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: WDMPYFGAETCF*WQNQCTWPLCP Trigger: TGGGCAAAGTGGCCAAGTGCATTGGTTTTGCCATCAAAAACAGGTTTCGGCACCGAAGTAAGGCATATCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS TCA 72 bp | CATGATGGCGAATATCACGCAGACAACCAGAAGCAATaGGGCAAACAGAATGTACTCAGCCCACTGTTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: HDGEYHADNQKQ*GKQNVLSPLFG Trigger: CCCAAACAGTGGGCTGAGTACATTCTGTTTGCCTCATTGCTTCTGGTTGTCTGCGTGATATTCGCCATCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS GCA 72 bp | CATCTTCTTCAGGGATGTGAAGTTGAAACCACATTTTaGAATGAGCGGGTACACCACAGCGTCCACAATGGG | + |
|
Preference number: 6 (lower is better) Translates to: HLLQGCEVETTF*NERVHHSVHNG Trigger: CCCATTGTGGACGCTGTGGTGTACCCGCTCATTGCAAAATGTGGTTTCAACTTCACATCCCTGAAGAAGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 72 bp | TGGGTAACAAGCTTGTTGACTGTGGATTCCGCACTGTaGAACTCTGAGTATGGGAGTGATGATCGTGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: WVTSLLTVDSAL*NSEYGSDDRGE Trigger: CTCTCCACGATCATCACTCCCATACTCAGAGTTCAACAGTGCGGAATCCACAGTCAACAAGCTTGTTACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 72 bp | ACTTTGCCCATGATGTTGCCCTGGGGCTGGAACTTCTaGTACATTCCACTGCCAAGGACAAACACAATTAGG | + |
|
Preference number: 6 (lower is better) Translates to: TLPMMLPWGWNF*YIPLPRTNTIR Trigger: CCTAATTGTGTTTGTCCTTGGCAGTGGAATGTACAAGAAGTTCCAGCCCCAGGGCAACATCATGGGCAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 72 bp | TTGGGATATGCCTTACTTCGGTGCCGAAACCTGTTTTaGATGGCAAAACCAATGCACTTGGCCACTTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: LGYALLRCRNLF*MAKPMHLATLP Trigger: GGGCAAAGTGGCCAAGTGCATTGGTTTTGCCATCAAAAACAGGTTTCGGCACCGAAGTAAGGCATATCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 72 bp | AAGTACTGTGGGATCTGCAGAGCCATGTTCACAGTGTaGGGTGGGATGTCTTCAAATTCCTTCACTTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: KYCGICRAMFTV*GGMSSNSFTSR Trigger: CCTGGAAGTGAAGGAATTTGAAGACATCCCACCCAACACTGTGAACATGGCTCTGCAGATCCCACAGTACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 90 bp | TCAAGATGGCATTCACCGTCTGCATCTGGTCCGGCTGAATTTCAATaGCTCCAATTTTCCCATTCATGGTCGTTGCTTGCAGTGTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: SRWHSPSASGPAEFQ*LQFSHSWSLLAVSI Trigger: GATGGACACTGCAAGCAACGACCATGAATGGGAAAATTGGAGCAATTGAAATTCAGCCGGACCAGATGCAGACGGTGAATGCCATCTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS TCA 72 bp | GTACAGGAACATCACCTTCGTGACCATCTTAATCTGTaGGATGAGCCGCTCGTCGTATTTCTCTTTAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VQEHHLRDHLNL*DEPLVVFLFSP Trigger: TGGGCTAAAGAGAAATACGACGAGCGGCTCATCTCACAGATTAAGATGGTCACGAAGGTGATGTTCCTGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS GCA 72 bp | TCAATTGCTCCAATTTTCCCATTCATGGTCGTTGCTTaGAGTGTCCATCTGGAACCCTGCTGGTCAAACAAG | + |
|
Preference number: 6 (lower is better) Translates to: SIAPIFPFMVVA*SVHLEPCWSNK Trigger: CTTGTTTGACCAGCAGGGTTCCAGATGGACACTGCAAGCAACGACCATGAATGGGAAAATTGGAGCAATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS GCA 72 bp | ATTCACCGTCTGCATCTGGTCCGGCTGAATTTCAATTaGTCCAATTTTCCCATTCATGGTCGTTGCTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IHRLHLVRLNFN*SNFPIHGRCLQ Trigger: CTGCAAGCAACGACCATGAATGGGAAAATTGGAGCAATTGAAATTCAGCCGGACCAGATGCAGACGGTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CCA 72 bp | CTTCTCATCCTCATCAAACTGTGCTTCAATCTCTGCTaGGTTGATGTAGGTGTAGAATCGAGCCATGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: LLILIKLCFNLC*VDVGVESSHDG Trigger: GCCATCATGGCTCGATTCTACACCTACATCAACCCAGCAGAGATTGAAGCACAGTTTGATGAGGATGAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
||
| CDS CAA 72 bp | CATTCACCGTCTGCATCTGGTCCGGCTGAATTTCAATaGCTCCAATTTTCCCATTCATGGTCGTTGCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: HSPSASGPAEFQ*LQFSHSWSLLA Trigger: TGCAAGCAACGACCATGAATGGGAAAATTGGAGCAATTGAAATTCAGCCGGACCAGATGCAGACGGTGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS TCA 72 bp | ATCAAGATGGCATTCACCGTCTGCATCTGGTCCGGCTaGATTTCAATTGCTCCAATTTTCCCATTCATGGTC | + |
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Preference number: 6 (lower is better) Translates to: IKMAFTVCIWSG*ISIAPIFPFMV Trigger: GACCATGAATGGGAAAATTGGAGCAATTGAAATTCAGCCGGACCAGATGCAGACGGTGAATGCCATCTTGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS CAA 72 bp | TTCAATTGCTCCAATTTTCCCATTCATGGTCGTTGCTaGCAGTGTCCATCTGGAACCCTGCTGGTCAAACAA | + |
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Preference number: 6 (lower is better) Translates to: FNCSNFPIHGRC*QCPSGTLLVKQ Trigger: TTGTTTGACCAGCAGGGTTCCAGATGGACACTGCAAGCAACGACCATGAATGGGAAAATTGGAGCAATTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS CAA 72 bp | GAATTTCAATTGCTCCAATTTTCCCATTCATGGTCGTaGCTTGCAGTGTCCATCTGGAACCCTGCTGGTCAA | + |
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Preference number: 6 (lower is better) Translates to: EFQLLQFSHSWS*LAVSIWNPAGQ Trigger: TTGACCAGCAGGGTTCCAGATGGACACTGCAAGCAACGACCATGAATGGGAAAATTGGAGCAATTGAAATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS GCA 72 bp | AATTTCAATTGCTCCAATTTTCCCATTCATGGTCGTTaGTTGCAGTGTCCATCTGGAACCCTGCTGGTCAAA | + |
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Preference number: 6 (lower is better) Translates to: NFNCSNFPIHGR*LQCPSGTLLVK Trigger: TTTGACCAGCAGGGTTCCAGATGGACACTGCAAGCAACGACCATGAATGGGAAAATTGGAGCAATTGAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS CAA 72 bp | GACAAACCTGATTCCGTTCTCCCCTTTCTCTGGCTTTaGGTTAAGACCATCTTTTACCACACGGTATTGACT | + |
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Preference number: 6 (lower is better) Translates to: DKPDSVLPFLWL*VKTIFYHTVLT Trigger: AGTCAATACCGTGTGGTAAAAGATGGTCTTAACCAAAAGCCAGAGAAAGGGGAGAACGGAATCAGGTTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS GCA 72 bp | TTTCTTCTCATCCTCATCAAACTGTGCTTCAATCTCTaGTGGGTTGATGTAGGTGTAGAATCGAGCCATGAT | + |
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Preference number: 6 (lower is better) Translates to: FLLILIKLCFNL*WVDVGVESSHD Trigger: ATCATGGCTCGATTCTACACCTACATCAACCCAGCAGAGATTGAAGCACAGTTTGATGAGGATGAGAAGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS CAA 72 bp | GGTCATGTTATTGTTTCCGATGTTCAAGACCTTAATTaGGACTTGATTTCCACCAGGGAAGACTGGAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: GHVIVSDVQDLN*DLISTREDWKS Trigger: ACTCTTCCAGTCTTCCCTGGTGGAAATCAAGTCCAAATTAAGGTCTTGAACATCGGAAACAATAACATGACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS CAA 90 bp | AAAATGCACGGTCATGTTATTGTTTCCGATGTTCAAGACCTTAATTaGGACTTGATTTCCACCAGGGAAGACTGGAAGAGTTTTATCGAT | + |
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Preference number: 6 (lower is better) Translates to: KMHGHVIVSDVQDLN*DLISTREDWKSFID Trigger: ATCGATAAAACTCTTCCAGTCTTCCCTGGTGGAAATCAAGTCCAAATTAAGGTCTTGAACATCGGAAACAATAACATGACCGTGCATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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| CDS TCA 72 bp | TTATTGTTTCCGATGTTCAAGACCTTAATTTGGACTTaGTTTCCACCAGGGAAGACTGGAAGAGTTTTATCG | + |
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Preference number: 6 (lower is better) Translates to: LLFPMFKTLIWT*FPPGKTGRVLS Trigger: CGATAAAACTCTTCCAGTCTTCCCTGGTGGAAATCAAGTCCAAATTAAGGTCTTGAACATCGGAAACAATAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088386.8 |
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