Pregenerated sensors for SLC14A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059336Ensembl transcript IDs: ENSMUST00000091813.12, ENSMUST00000160292.8, ENSMUST00000160639.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCATCTTCACTTCCGAGGGGGTCTTCGCATGCACATTACTCTTGCTaGCCCAACGTTTATTCCACAAACTCCAAACAGGAAACTTTCAGC | + |
|
Preference number: 1 (lower is better) Translates to: ASSLPRGSSHAHYSC*PNVYSTNSKQETFS Trigger: GCTGAAAGTTTCCTGTTTGGAGTTTGTGGAATAAACGTTGGGTCAGCAAGAGTAATGTGCATGCGAAGACCCCCTCGGAAGTGAAGATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR CCA 90 bp | GATTTGAAATTTTCACTTTTCCAACCTCCCAGAAATAAATTTCACTaGACAGGCAGCAGGCGGTCAGTGAAGCTTCAGCAAGACTGGATG | + |
|
Preference number: 1 (lower is better) Translates to: DLKFSLFQPPRNKFH*TGSRRSVKLQQDWM Trigger: CATCCAGTCTTGCTGAAGCTTCACTGACCGCCTGCTGCCTGTCCAGTGAAATTTATTTCTGGGAGGTTGGAAAAGTGAAAATTTCAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR TCA 90 bp | TTCTGTGCCCGTGGATTCTGCAAGGCTTACATGGTTTACAGAGCTTaGCTTTTAATACTGACATCAAAGATAGCTTCAAATAACAATAAT | + |
|
Preference number: 1 (lower is better) Translates to: FCARGFCKAYMVYRA*LLILTSKIASNNNN Trigger: ATTATTGTTATTTGAAGCTATCTTTGATGTCAGTATTAAAAGTCAAGCTCTGTAAACCATGTAAGCCTTGCAGAATCCACGGGCACAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR GCA 90 bp | CTTTTAATACTGACATCAAAGATAGCTTCAAATAACAATAATTGTTaGTGCTTCCATTCCTTCTGTCGGTCGGAACATTTTGACTCTCTA | + |
|
Preference number: 1 (lower is better) Translates to: LLILTSKIASNNNNC*CFHSFCRSEHFDSL Trigger: TAGAGAGTCAAAATGTTCCGACCGACAGAAGGAATGGAAGCAGCAACAATTATTGTTATTTGAAGCTATCTTTGATGTCAGTATTAAAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCACCACCCAGCTGGAGAGCTGGGGACTAGCGCTCTGGTCAACCTGCCCCACTCCGAGAACCCTGGGCTaGTTTGTTTCTGTGCCCGTG | + |
|
Preference number: 2 (lower is better) Translates to: ITTQLESWGLALWSTCPTPRTLG*FVSVPV Trigger: CACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGG...AGTGGGGCAGGTTGACCAGAGCGCTAGTCCCCAGCTCTCCAGCTGGGTGGTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR-3UTR GCA 90 bp | AGAGAACATCACCACCCAGCTGGAGAGCTGGGGACTAGCGCTCTGGTCAACCTGCCTGCCGACCCCCAGTaGACAGTGGGGTTTAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: REHHHPAGELGTSALVNLPADPQ*TVGFKF Trigger: GAATTTAAACCCCACTGTGCACTGGGGGTCGGCAGG...CAGGTTGACCAGAGCGCTAGTCCCCAGCTCTCCAGCTGGGTGGTGATGTTCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR-3UTR GCA 90 bp | GGGACTAGCGCTCTGGTCAACCTGCCCCACTGCAATGTTGTTATGCGGTTGCTCCCGAGAACCCTGGGCTaGTTTGTTTCTGTGCCCGTG | + |
|
Preference number: 2 (lower is better) Translates to: GTSALVNLPHCNVVMRLLPRTLG*FVSVPV Trigger: CACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGG...GAGCAACCGCATAACAACATTGCAGTGGGGCAGGTTGACCAGAGCGCTAGTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGATTCTGCACCTGCCGACCCCCAGTaGACAGTGGGGTTTAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: KASPRTLGCFVSVPVDSAPADPQ*TVGFKF Trigger: GAATTTAAACCCCACTGTGCACTGGGGGTCGGCAGG...TGCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCACCACCCAGCTGGAGAGCTGGGGACTAGCGCTCTGGTCAACCTGCCCCACTACCCCCAGTGCACAGTaGGGTTTAAATTCCATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: ITTQLESWGLALWSTCPTTPSAQ*GLNSIP Trigger: TGGAATGGAATTTAAACCCCACTGTGCACTGGGGGT...AGTGGGGCAGGTTGACCAGAGCGCTAGTCCCCAGCTCTCCAGCTGGGTGGTGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR-3UTR GCA 90 bp | GTAGACGAGGCTGGCCTTGAACTCAGAGATCAGCTTGCCCCCGCTGCCACTTCCGAAAGGCTCTGTGAGTaGAGCTTAGTTGCTGGTGTT | + |
|
Preference number: 2 (lower is better) Translates to: VDEAGLELRDQLAPAATSERLCE*SLVAGV Trigger: AACACCAGCAACTAAGCTGCACTCACAGAGCCTTTC...GGAAGTGGCAGCGGGGGCAAGCTGATCTCTGAGTTCAAGGCCAGCCTCGTCTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR-3UTR GCA 90 bp | AGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGATTCTGCAAGGCTTACATGGCCTGCCGACCCCCAGTaGACAGTGGGGTTTAAATTC | + |
|
Preference number: 2 (lower is better) Translates to: RTLGCFVSVPVDSARLTWPADPQ*TVGFKF Trigger: GAATTTAAACCCCACTGTGCACTGGGGGTCGGCAGG...CCATGTAAGCCTTGCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGTTTGTTCGGTTGGGTTTTGGAGATAGAGCCATTCGTGTAGCCCACGCTGGACTTAGAACTGACTCATaGCCATGGCTGTTGGGCGGC | + |
|
Preference number: 2 (lower is better) Translates to: VFVRLGFGDRAIRVAHAGLRTDS*PWLLGG Trigger: GCCGCCCAACAGCCATGGTCATGAGTCAGTTCTAAG...TCCAGCGTGGGCTACACGAATGGCTCTATCTCCAAAACCCAACCGAACAAACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR-3UTR CCA 90 bp | AGCTGGGGACTAGCGCTCTGGTCAACCTGCCCCACTGCAATGTTGTTATGCGGTACCCCCAGTGCACAGTaGGGTTTAAATTCCATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: SWGLALWSTCPTAMLLCGTPSAQ*GLNSIP Trigger: TGGAATGGAATTTAAACCCCACTGTGCACTGGGGGT...ACCGCATAACAACATTGCAGTGGGGCAGGTTGACCAGAGCGCTAGTCCCCAGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR-3UTR CCA 90 bp | GTAGACGAGGCTGGCCTTGAACTCAGAGATCAGCTTGCCCCCGCTGCCACTTCCAGATTCATTCAACTGTaGCTTCAAAAGGCTCTCGAG | + |
|
Preference number: 2 (lower is better) Translates to: VDEAGLELRDQLAPAATSRFIQL*LQKALE Trigger: CTCGAGAGCCTTTTGAAGCCACAGTTGAATGAATCT...GGAAGTGGCAGCGGGGGCAAGCTGATCTCTGAGTTCAAGGCCAGCCTCGTCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAAAGCAAAAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGCCAGAGAACATCAACTaGACACGGCTCTCATGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: SESKRPLREPWAALFLCPPENIN*TRLSCD Trigger: ATCACATGAGAGCCGTGTCCAGTTGATGTTCTCTGG...CGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTTTTGCTTTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGGGACTTGTTTATGTGTTTGTTCGGTTGGGTTTTGGAGATAGAGCCATTCGTACCCAGCTGGAGAGCTaGGGACTAGCGCTCTGGTCA | + |
|
Preference number: 2 (lower is better) Translates to: GGLVYVFVRLGFGDRAIRTQLES*GLALWS Trigger: TGACCAGAGCGCTAGTCCCCAGCTCTCCAGCTGGGT...ACGAATGGCTCTATCTCCAAAACCCAACCGAACAAACACATAAACAAGTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR-3UTR CCA 90 bp | AGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGATTCTGCAAGGCTTACATGGCCAGAGAACATCAACTaGACACGGCTCTCATGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: RTLGCFVSVPVDSARLTWPENIN*TRLSCD Trigger: ATCACATGAGAGCCGTGTCCAGTTGATGTTCTCTGG...CCATGTAAGCCTTGCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAAACAAGAAGCAAGCAAAAGAATGGATCGCCGAGAGTATGGAAGTGGCTCCCCTTAGAACTGACTCATaGCCATGGCTGTTGGGCGGC | + |
|
Preference number: 2 (lower is better) Translates to: KNKKQAKEWIAESMEVAPLRTDS*PWLLGG Trigger: GCCGCCCAACAGCCATGGTCATGAGTCAGTTCTAAG...GGGAGCCACTTCCATACTCTCGGCGATCCATTCTTTTGCTTGCTTCTTGTTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTCTGAAAGCAAAAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCCAGAGAACATCAACTaGACACGGCTCTCATGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: ILKAKGLSENPGLLCFCAPENIN*TRLSCD Trigger: ATCACATGAGAGCCGTGTCCAGTTGATGTTCTCTGG...GGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTTTTGCTTTCAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCTGGGGACTAGCGCTCTGGTCAACCTGCCCCACTGCAATGTTGTTATGCGGTTCTGCAAGGCTTACATaGTTTACAGAGCTTGACTTT | + |
|
Preference number: 2 (lower is better) Translates to: SWGLALWSTCPTAMLLCGSARLT*FTELDF Trigger: AAAGTCAAGCTCTGTAAACCATGTAAGCCTTGCAGA...ACCGCATAACAACATTGCAGTGGGGCAGGTTGACCAGAGCGCTAGTCCCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR CAA 90 bp | CATTCAGCAAGCTGCGGATTGCCTTCTCAGCACGATTTTCTGCTTTaGGTGTTTGAGGCAGGGTTTTTCAGTGTAGTCTTGGCTGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: HSASCGLPSQHDFLL*VFEAGFFSVVLAVQ Trigger: CTGGACAGCCAAGACTACACTGAAAAACCCTGCCTCAAACACCAAAAGCAGAAAATCGTGCTGAGAAGGCAATCCGCAGCTTGCTGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR-3UTR TCA 90 bp | TCCTTCTGTCGGTCGGAACATTTTGACTCTCTAAATGCAGTCTTAGTGATACTCCTTAGAACTGACTCATaGCCATGGCTGTTGGGCGGC | + |
|
Preference number: 2 (lower is better) Translates to: SFCRSEHFDSLNAVLVILLRTDS*PWLLGG Trigger: GCCGCCCAACAGCCATGGTCATGAGTCAGTTCTAAG...GAGTATCACTAAGACTGCATTTAGAGAGTCAAAATGTTCCGACCGACAGAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR CAA 90 bp | TCCAGCATCTTCACTTCCGAGGGGGTCTTCGCATGCACATTACTCTaGCTGACCCAACGTTTATTCCACAAACTCCAAACAGGAAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: SSIFTSEGVFACTLL*LTQRLFHKLQTGNF Trigger: AAAGTTTCCTGTTTGGAGTTTGTGGAATAAACGTTGGGTCAGCAAGAGTAATGTGCATGCGAAGACCCCCTCGGAAGTGAAGATGCTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR-3UTR GCA 90 bp | CACAAACTCCAAACAGGAAACTTTCAGCTCAAACACTGGAAATCCAGACTTTCCAACACACAGCTCTGGTaGTTAGGGAATGGAAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: HKLQTGNFQLKHWKSRLSNTQLW*LGNGNR Trigger: CCTGTTTCCATTCCCTAAGCACCAGAGCTGTGTGTT...GGAAAGTCTGGATTTCCAGTGTTTGAGCTGAAAGTTTCCTGTTTGGAGTTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR CAA 90 bp | GATTCATTCAACTGTGGCTTCAAAAGGCTCTCGAGGTTGATGAAGTaGCCTTATAAGCACTTAAAAACCCAACACACAGCTCTGGTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: DSFNCGFKRLSRLMK*PYKHLKTQHTALVL Trigger: AAGCACCAGAGCTGTGTGTTGGGTTTTTAAGTGCTTATAAGGCAACTTCATCAACCTCGAGAGCCTTTTGAAGCCACAGTTGAATGAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR-3UTR GCA 90 bp | CACAAACTCCAAACAGGAAACTTTCAGCTCAAACACTGGAAATCCAGACTTTCCATGTTCCTAAGTTTGTaGTCCTCCTACCTCAGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: HKLQTGNFQLKHWKSRLSMFLSL*SSYLSL Trigger: GAGACTGAGGTAGGAGGAGCACAAACTTAGGAACAT...GGAAAGTCTGGATTTCCAGTGTTTGAGCTGAAAGTTTCCTGTTTGGAGTTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR CAA 90 bp | ATACCCTCAGATTCATTCAACTGTGGCTTCAAAAGGCTCTCGAGGTaGATGAAGTTGCCTTATAAGCACTTAAAAACCCAACACACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: IPSDSFNCGFKRLSR*MKLPYKHLKTQHTA Trigger: AGCTGTGTGTTGGGTTTTTAAGTGCTTATAAGGCAACTTCATCAACCTCGAGAGCCTTTTGAAGCCACAGTTGAATGAATCTGAGGGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR CCA 72 bp | ATCACCACCCAGCTGGAGAGCTGGGGACTAGCGCTCTaGTCAACCTGCCCCACTGCAATGTTGTTATGCGGT | + |
|
Preference number: 3 (lower is better) Translates to: ITTQLESWGLAL*STCPTAMLLCG Trigger: ACCGCATAACAACATTGCAGTGGGGCAGGTTGACCAGAGCGCTAGTCCCCAGCTCTCCAGCTGGGTGGTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR TCA 72 bp | ATGTGGCTGTGCCCTGAAGGCATCTGCACTACAGTCTaGCTTCAGCCATTCAGCAAGCTGCGGATTGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: MWLCPEGICTTV*LQPFSKLRIAF Trigger: GAAGGCAATCCGCAGCTTGCTGAATGGCTGAAGTCAGACTGTAGTGCAGATGCCTTCAGGGCACAGCCACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR GCA 72 bp | AGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTaGCCGTGGATTCTGCAAGGCTTACATGGTTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: RPLREPWAALFL*PWILQGLHGLQ Trigger: CTGTAAACCATGTAAGCCTTGCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR GCA 72 bp | CATTCGTGTAGCCCACGCTGGATGTTCCTAAGTTTGTaGTCCTCCTACCTCAGTCTCCCTAGTGCTGGGATT | + |
|
Preference number: 3 (lower is better) Translates to: HSCSPRWMFLSL*SSYLSLPSAGI Trigger: AATCCCAGCACTAGGGAGACTGAGGTAGGAGGAGCACAAACTTAGGAACATCCAGCGTGGGCTACACGAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR CCA 72 bp | CTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTaGATTCTGCAAGGCTTACATGGTTTACAGAGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: LREPWAALFLCP*ILQGLHGLQSL Trigger: CAAGCTCTGTAAACCATGTAAGCCTTGCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCAAAAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGAAGAGAAGAAAAGCAATaGTGGAGAGCCTGGAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: KAKGLSENPGLLCFCARGREEKQ*WRAWKS Trigger: TGACTTCCAGGCTCTCCACAATTGCTTTTCTTCTCT...TCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTTTTGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR CCA 72 bp | ACTGATTCTGAAAGCAAAAGGCCTCTCCGAGAACCCTaGGCTGCTTTGTTTCTGTGCCCGTGGATTCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: TDSESKRPLREP*AALFLCPWILQ Trigger: TTGCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTTTTGCTTTCAGAATCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGATTCTGCAAGGCTTACATGGAGAGAAGAAAAGCAATaGTGGAGAGCCTGGAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: RTLGCFVSVPVDSARLTWREEKQ*WRAWKS Trigger: TGACTTCCAGGCTCTCCACAATTGCTTTTCTTCTCT...CCATGTAAGCCTTGCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR CCA 72 bp | GTGGCTCCCAGAGAAGAAAAGCAATTGTGGAGAGCCTaGAAGTCAACTGGAGCTGCACTTAGAACTGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: VAPREEKQLWRA*KSTGAALRTDS Trigger: TGAGTCAGTTCTAAGTGCAGCTCCAGTTGACTTCCAGGCTCTCCACAATTGCTTTTCTTCTCTGGGAGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR CCA 72 bp | GTCTTAGTGATACTCCTGCCGACCCCCAGTGCACAGTaGGGTTTAAATTCCATTCCAGAGAACATCAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: VLVILLPTPSAQ*GLNSIPENINW Trigger: CCAGTTGATGTTCTCTGGAATGGAATTTAAACCCCACTGTGCACTGGGGGTCGGCAGGAGTATCACTAAGAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTTGAGGCAGGGTTTTTCAGTGTAGTCTTGGCTGTCCAGGAACTCTCTCTGTTGTTCGGTTGGGTTTaGGAGATAGAGCCATTCGTG | + |
|
Preference number: 3 (lower is better) Translates to: VFEAGFFSVVLAVQELSLLFGWV*EIEPFV Trigger: CACGAATGGCTCTATCTCCAAAACCCAACCGAACAA...CAGAGAGAGTTCCTGGACAGCCAAGACTACACTGAAAAACCCTGCCTCAAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR TCA 72 bp | GAAATAAATTTCACTGGACAGGCAGCAGGCGGTCAGTaGAGCTTCAGCAAGACTGGATGTAGAAGGTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: EINFTGQAAGGQ*SFSKTGCRRFG Trigger: CCCAAACCTTCTACATCCAGTCTTGCTGAAGCTTCACTGACCGCCTGCTGCCTGTCCAGTGAAATTTATTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR TCA 72 bp | CTTCCGAGGGGGTCTTCGCATGCACATTACTCTTGCTaGCCCAACGTTTATTCCACAAACTCCAAACAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LPRGSSHAHYSC*PNVYSTNSKQE Trigger: TTCCTGTTTGGAGTTTGTGGAATAAACGTTGGGTCAGCAAGAGTAATGTGCATGCGAAGACCCCCTCGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR CCA 72 bp | AGTATGGAAGTGGCTCCCAGAGAAGAAAAGCAATTGTaGAGAGCCTGGAAGTCAACTGGAGCTGCACTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: SMEVAPREEKQL*RAWKSTGAALR Trigger: TCTAAGTGCAGCTCCAGTTGACTTCCAGGCTCTCCACAATTGCTTTTCTTCTCTGGGAGCCACTTCCATACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR CCA 72 bp | GACAATGTTGCCTTAGGTGAGTTAGAGCTTTGCTGCTaGCTGGGGCTCAGTTGTTTTGTAGATGCTTTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: DNVALGELELCC*LGLSCFVDALV Trigger: GACCAAAGCATCTACAAAACAACTGAGCCCCAGCCAGCAGCAAAGCTCTAACTCACCTAAGGCAACATTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR TCA 72 bp | AACCTGCCCCACTGCAATGTTGTTATGCGGTTGCTCTaGGTAACTTGCACTGATTCTGAAAGCAAAAGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: NLPHCNVVMRLL*VTCTDSESKRP Trigger: AGGCCTTTTGCTTTCAGAATCAGTGCAAGTTACTCAGAGCAACCGCATAACAACATTGCAGTGGGGCAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR GCA 72 bp | AAATGCAGTCTTAGTGATACTCCTGCCGACCCCCAGTaGACAGTGGGGTTTAAATTCCATTCCAGAGAACAT | + |
|
Preference number: 3 (lower is better) Translates to: KCSLSDTPADPQ*TVGFKFHSREH Trigger: ATGTTCTCTGGAATGGAATTTAAACCCCACTGTGCACTGGGGGTCGGCAGGAGTATCACTAAGACTGCATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR CCA 72 bp | GCTCCTCCTACCTCAGTCTCCCTAGTGCTGGGATTTTaGGCACAAGCAACATACTTGTCAGGAAAAAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: APPTSVSLVLGF*AQATYLSGKRK Trigger: TTTTCTTTTTCCTGACAAGTATGTTGCTTGTGCCCAAAATCCCAGCACTAGGGAGACTGAGGTAGGAGGAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR TCA 72 bp | TTGCTGCTTCCATTCCTTCTGTCGGTCGGAACATTTTaGCTCTCTAAATGCAGTCTTAGTGATACTCCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LLLPFLLSVGTF*LSKCSLSDTPA Trigger: GGCAGGAGTATCACTAAGACTGCATTTAGAGAGTCAAAATGTTCCGACCGACAGAAGGAATGGAAGCAGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR CCA 72 bp | ACAAGAAGCAAGCAAAAGAATGGATCGCCGAGAGTATaGAAGTGGCTCCCAGAGAAGAAAAGCAATTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: TRSKQKNGSPRV*KWLPEKKSNCG Trigger: TCCACAATTGCTTTTCTTCTCTGGGAGCCACTTCCATACTCTCGGCGATCCATTCTTTTGCTTGCTTCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR CCA 72 bp | TTTTCACTTTTCCAACCTCCCAGAAATAAATTTCACTaGACAGGCAGCAGGCGGTCAGTGAAGCTTCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FSLFQPPRNKFH*TGSRRSVKLQQ Trigger: TTGCTGAAGCTTCACTGACCGCCTGCTGCCTGTCCAGTGAAATTTATTTCTGGGAGGTTGGAAAAGTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR-3UTR CAA 90 bp | GTGTTTGAGGCAGGGTTTTTCAGTGTAGTCTTGGCTGTCCAGGAACTCTCTCTGCATGGTTTACAGAGCTaGACTTTTAATACTGACATC | + |
|
Preference number: 3 (lower is better) Translates to: VFEAGFFSVVLAVQELSLHGLQS*TFNTDI Trigger: GATGTCAGTATTAAAAGTCAAGCTCTGTAAACCATG...CAGAGAGAGTTCCTGGACAGCCAAGACTACACTGAAAAACCCTGCCTCAAACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR-3UTR CAA 90 bp | TCCTTCTGTCGGTCGGAACATTTTGACTCTCTAAATGCAGTCTTAGTGATACTCAGAGAAGAAAAGCAATaGTGGAGAGCCTGGAAGTCA | + |
|
Preference number: 3 (lower is better) Translates to: SFCRSEHFDSLNAVLVILREEKQ*WRAWKS Trigger: TGACTTCCAGGCTCTCCACAATTGCTTTTCTTCTCT...GAGTATCACTAAGACTGCATTTAGAGAGTCAAAATGTTCCGACCGACAGAAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR CCA 72 bp | CACAAACTCCAAACAGGAAACTTTCAGCTCAAACACTaGAAATCCAGACTTTCCATAGGACGACTCAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HKLQTGNFQLKH*KSRLSIGRLRN Trigger: ATTCCTGAGTCGTCCTATGGAAAGTCTGGATTTCCAGTGTTTGAGCTGAAAGTTTCCTGTTTGGAGTTTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR TCA 72 bp | GAGATTTTAAATTATCACAGATTTCGATTTGTTTCCTaGGAAGAGGGAATGTGGCTGTGCCCTGAAGGCATC | + |
|
Preference number: 3 (lower is better) Translates to: EILNYHRFRFVS*EEGMWLCPEGI Trigger: GATGCCTTCAGGGCACAGCCACATTCCCTCTTCTCAGGAAACAAATCGAAATCTGTGATAATTTAAAATCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR TCA 72 bp | CGTGGATTCTGCAAGGCTTACATGGTTTACAGAGCTTaGCTTTTAATACTGACATCAAAGATAGCTTCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: RGFCKAYMVYRA*LLILTSKIASN Trigger: ATTTGAAGCTATCTTTGATGTCAGTATTAAAAGTCAAGCTCTGTAAACCATGTAAGCCTTGCAGAATCCACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR GCA 72 bp | CTGACATCAAAGATAGCTTCAAATAACAATAATTGTTaGTGCTTCCATTCCTTCTGTCGGTCGGAACATTTT | + |
|
Preference number: 3 (lower is better) Translates to: LTSKIASNNNNC*CFHSFCRSEHF Trigger: AAAATGTTCCGACCGACAGAAGGAATGGAAGCAGCAACAATTATTGTTATTTGAAGCTATCTTTGATGTCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR TCA 90 bp | ATCACCACCCAGCTGGAGAGCTGGGGACTAGCGCTCTGGTCAACCTGCCCCACTGTAGTGTCCTGTGGCTaGCAGGTACATCGACAACGC | + |
|
Preference number: 4 (lower is better) Translates to: ITTQLESWGLALWSTCPTVVSCG*QVHRQR Trigger: GCGTTGTCGATGTACCTGTCAGCCACAGGACACTAC...AGTGGGGCAGGTTGACCAGAGCGCTAGTCCCCAGCTCTCCAGCTGGGTGGTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | ATCACCACCCAGCTGGAGAGCTGGGGACTAGCGCTCTGGTCAACCTGCCCCACTGGATGCCTACCAGGGTaGCATTGTAACCTTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ITTQLESWGLALWSTCPTGCLPG*HCNLGA Trigger: GGCTCCAAGGTTACAATGCCACCCTGGTAGGCATCC...AGTGGGGCAGGTTGACCAGAGCGCTAGTCCCCAGCTCTCCAGCTGGGTGGTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR TCA 90 bp | ATCACCACCCAGCTGGAGAGCTGGGGACTAGCGCTCTGGTCAACCTGCCCCACTTCACAGCCATATATCTaGCCGACTCCCACCGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ITTQLESWGLALWSTCPTSQPYI*PTPTGR Trigger: TCTTCCGGTGGGAGTCGGTCAGATATATGGCTGTGA...AGTGGGGCAGGTTGACCAGAGCGCTAGTCCCCAGCTCTCCAGCTGGGTGGTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGATTCTGCAAGGCTTCAGCGTGCAGGCACATaGGTGGGGAGGAGAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SPRTLGCFVSVPVDSARLQRAGT*VGRRAG Trigger: TCCTGCTCTCCTCCCCACTCATGTGCCTGCACGCTG...AAGCCTTGCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | ATCACCACCCAGCTGGAGAGCTGGGGACTAGCGCTCTGGTCAACCTGCCCCACTAGAGGGCTGTCAGAGTaGAGACCACAGTTCCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: ITTQLESWGLALWSTCPTRGLSE*RPQFLH Trigger: GTGTAGGAACTGTGGTCTCCACTCTGACAGCCCTCT...AGTGGGGCAGGTTGACCAGAGCGCTAGTCCCCAGCTCTCCAGCTGGGTGGTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR TCA 90 bp | AGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGATTCTGCAAGGCTTACATGGCAGCGTGCAGGCACATaGGTGGGGAGGAGAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTLGCFVSVPVDSARLTWQRAGT*VGRRAG Trigger: TCCTGCTCTCCTCCCCACTCATGTGCCTGCACGCTG...CCATGTAAGCCTTGCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGATTCTGCCTCCGAAGTAGGCAGTaGACAGGGCACAGGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KGLSENPGLLCFCARGFCLRSRQ*TGHRQE Trigger: CTCTTGCCTGTGCCCTGTTCACTGCCTACTTCGGAG...GCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR TCA 90 bp | AGCTGGGGACTAGCGCTCTGGTCAACCTGCCCCACTGCAATGTTGTTATGCGGTCGTAGCCAAGTACTTTaGAGCCACACCTTCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SWGLALWSTCPTAMLLCGRSQVL*SHTFSR Trigger: GCGGGAGAAGGTGTGGCTTCAAAGTACTTGGCTACG...ACCGCATAACAACATTGCAGTGGGGCAGGTTGACCAGAGCGCTAGTCCCCAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCAAAAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGACTCCGAAGTAGGCAGTaGACAGGGCACAGGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KAKGLSENPGLLCFCARGLRSRQ*TGHRQE Trigger: CTCTTGCCTGTGCCCTGTTCACTGCCTACTTCGGAG...TCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTTTTGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAACATCACCACCCAGCTGGAGAGCTGGGGACTAGCGCTCTGGTCAACCTGATCGCCGATCTGTCTTaGCTAAGCAAGAGGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: REHHHPAGELGTSALVNLIADLS*LSKRAV Trigger: GACAGCCCTCTTGCTTAGCCAAGACAGATCGGCGAT...CAGGTTGACCAGAGCGCTAGTCCCCAGCTCTCCAGCTGGGTGGTGATGTTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | GGGACTAGCGCTCTGGTCAACCTGCCCCACTGCAATGTTGTTATGCGGTTGCTCGGATGCCTACCAGGGTaGCATTGTAACCTTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GTSALVNLPHCNVVMRLLGCLPG*HCNLGA Trigger: GGCTCCAAGGTTACAATGCCACCCTGGTAGGCATCC...GAGCAACCGCATAACAACATTGCAGTGGGGCAGGTTGACCAGAGCGCTAGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | GGGACTAGCGCTCTGGTCAACCTGCCCCACTGCAATGTTGTTATGCGGTTGCTCGGACCAGGTACAAGCTaGCAGGTGAACCACAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GTSALVNLPHCNVVMRLLGPGTS*QVNHSH Trigger: ATGGCTGTGGTTCACCTGCCAGCTTGTACCTGGTCC...GAGCAACCGCATAACAACATTGCAGTGGGGCAGGTTGACCAGAGCGCTAGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR TCA 90 bp | TCTGAAAGCAAAAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGGTAGTGTCCTGTGGCTaGCAGGTACATCGACAACGC | + |
|
Preference number: 4 (lower is better) Translates to: SESKRPLREPWAALFLCPVVSCG*QVHRQR Trigger: GCGTTGTCGATGTACCTGTCAGCCACAGGACACTAC...CGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTTTTGCTTTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR GCA 90 bp | AGAGAACATCACCACCCAGCTGGAGAGCTGGGGACTAGCGCTCTGGTCAACCTGGAACATCCCTCCAATTaGAATGCAGGCCAGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: REHHHPAGELGTSALVNLEHPSN*NAGQRA Trigger: AGCTCTCTGGCCTGCATTGCAATTGGAGGGATGTTC...CAGGTTGACCAGAGCGCTAGTCCCCAGCTCTCCAGCTGGGTGGTGATGTTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | AGAGAACATCACCACCCAGCTGGAGAGCTGGGGACTAGCGCTCTGGTCAACCTGATCCAGTCCATGAACTaGAGCACCACGGGTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: REHHHPAGELGTSALVNLIQSMN*STTGLS Trigger: AGACAAACCCGTGGTGCTCCAGTTCATGGACTGGAT...CAGGTTGACCAGAGCGCTAGTCCCCAGCTCTCCAGCTGGGTGGTGATGTTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | AAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGATTCTGCAAGAGGGCTGTCAGAGTaGAGACCACAGTTCCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: KASPRTLGCFVSVPVDSARGLSE*RPQFLH Trigger: GTGTAGGAACTGTGGTCTCCACTCTGACAGCCCTCT...TGCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGATTCTGCATCGCCGATCTGTCTTaGCTAAGCAAGAGGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KGLSENPGLLCFCARGFCIADLS*LSKRAV Trigger: GACAGCCCTCTTGCTTAGCCAAGACAGATCGGCGAT...GCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGATTCTGCAAGGCTTGGACCAGGTACAAGCTaGCAGGTGAACCACAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: SPRTLGCFVSVPVDSARLGPGTS*QVNHSH Trigger: ATGGCTGTGGTTCACCTGCCAGCTTGTACCTGGTCC...AAGCCTTGCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR CAA 72 bp | AGCCATTCGTGTAGCCCACGCTGGATGTTCCTAAGTTaGTGCTCCTCCTACCTCAGTCTCCCTAGTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHSCSPRWMFLS*CSSYLSLPSAG Trigger: CCCAGCACTAGGGAGACTGAGGTAGGAGGAGCACAAACTTAGGAACATCCAGCGTGGGCTACACGAATGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| CDS-3UTR TCA 90 bp | TCTGAAAGCAAAAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTCACAGCCATATATCTaGCCGACTCCCACCGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SESKRPLREPWAALFLCPSQPYI*PTPTGR Trigger: TCTTCCGGTGGGAGTCGGTCAGATATATGGCTGTGA...CGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTTTTGCTTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR TCA 90 bp | TCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGATTCTGCAAGGCTTTCACAGCCATATATCTaGCCGACTCCCACCGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPRTLGCFVSVPVDSARLSQPYI*PTPTGR Trigger: TCTTCCGGTGGGAGTCGGTCAGATATATGGCTGTGA...AAGCCTTGCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | GGGACTAGCGCTCTGGTCAACCTGCCCCACTGCAATGTTGTTATGCGGTTGCTCATCCAGTCCATGAACTaGAGCACCACGGGTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTSALVNLPHCNVVMRLLIQSMN*STTGLS Trigger: AGACAAACCCGTGGTGCTCCAGTTCATGGACTGGAT...GAGCAACCGCATAACAACATTGCAGTGGGGCAGGTTGACCAGAGCGCTAGTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | AGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGATTCTGCAAGGCTTACATGGGGACCAGGTACAAGCTaGCAGGTGAACCACAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTLGCFVSVPVDSARLTWGPGTS*QVNHSH Trigger: ATGGCTGTGGTTCACCTGCCAGCTTGTACCTGGTCC...CCATGTAAGCCTTGCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR TCA 90 bp | ACTCCTGCCGACCCCCAGTGCACAGTGGGGTTTAAATTCCATTCCAGAGAACATCGTAGCCAAGTACTTTaGAGCCACACCTTCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TPADPQCTVGFKFHSREHRSQVL*SHTFSR Trigger: GCGGGAGAAGGTGTGGCTTCAAAGTACTTGGCTACG...ATGTTCTCTGGAATGGAATTTAAACCCCACTGTGCACTGGGGGTCGGCAGGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCGACCCCCAGTGCACAGTGGGGTTTAAATTCCATTCCAGAGAACATCAACGATCCAATAGCAGCGTaGAGGCACATGAGTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LPTPSAQWGLNSIPENINDPIAA*RHMSGE Trigger: CTCCCCACTCATGTGCCTGCACGCTGCTATTGGATC...GTTGATGTTCTCTGGAATGGAATTTAAACCCCACTGTGCACTGGGGGTCGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR GCA 90 bp | AAAGCAAAAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGAGTCTTCAAATGGAGCTaGAAGACTGAGTCCCGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: KAKGLSENPGLLCFCARGVFKWS*KTESRD Trigger: ATCGCGGGACTCAGTCTTGCAGCTCCATTTGAAGAC...TCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTTTTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | GCAAGCAAAAGAATGGATCGCCGAGAGTATGGAAGTGGCTCCCAGAGAAGAAAAGCCCACCAGGGGTTCTaGACCAGAAGTCCCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ASKRMDRREYGSGSQRRKAHQGF*TRSPTR Trigger: TCTGGTGGGACTTCTGGTCCAGAACCCCTGGTGGGC...TTTTCTTCTCTGGGAGCCACTTCCATACTCTCGGCGATCCATTCTTTTGCTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR CAA 72 bp | GAAAGCAAAAGGCCTCTCCGAGAACCCTGGGCTGCTTaGTTTCTGTGCCCGTGGATTCTGCAAGGCTTACAT | + |
|
Preference number: 4 (lower is better) Translates to: ESKRPLREPWAA*FLCPWILQGLH Trigger: ATGTAAGCCTTGCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTTTTGCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTTGTTCGGTTGGGTTTTGGAGATAGAGCCATTCGTGTAGCCCACGCTGGAATCGCCGATCTGTCTTaGCTAAGCAAGAGGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VFVRLGFGDRAIRVAHAGIADLS*LSKRAV Trigger: GACAGCCCTCTTGCTTAGCCAAGACAGATCGGCGAT...TCCAGCGTGGGCTACACGAATGGCTCTATCTCCAAAACCCAACCGAACAAACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGGACTAGCGCTCTGGTCAACCTGCCCCACTGCAATGTTGTTATGCGGTGTAGATGTCTTCAAATaGAGCTGCAAGACTGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SWGLALWSTCPTAMLLCGVDVFK*SCKTES Trigger: GGACTCAGTCTTGCAGCTCCATTTGAAGACATCTAC...ACCGCATAACAACATTGCAGTGGGGCAGGTTGACCAGAGCGCTAGTCCCCAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGATTCTGCGCATCCTGTAGATGTTaGGATTTTTCGTGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KGLSENPGLLCFCARGFCASCRC*DFSWSA Trigger: TGCTGACCACGAAAAATCCCAACATCTACAGGATGC...GCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR GCA 90 bp | ATGGAAGTGGCTCCCAGAGAAGAAAAGCAATTGTGGAGAGCCTGGAAGTCAACTGATCCAATAGCAGCGTaGAGGCACATGAGTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MEVAPREEKQLWRAWKSTDPIAA*RHMSGE Trigger: CTCCCCACTCATGTGCCTGCACGCTGCTATTGGATC...AGTTGACTTCCAGGCTCTCCACAATTGCTTTTCTTCTCTGGGAGCCACTTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR GCA 90 bp | CTGCCGACCCCCAGTGCACAGTGGGGTTTAAATTCCATTCCAGAGAACATCAACGAACATCCCTCCAATTaGAATGCAGGCCAGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPTPSAQWGLNSIPENINEHPSN*NAGQRA Trigger: AGCTCTCTGGCCTGCATTGCAATTGGAGGGATGTTC...GTTGATGTTCTCTGGAATGGAATTTAAACCCCACTGTGCACTGGGGGTCGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | AAAGCAAAAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGAGTAGATGTCTTCAAATaGAGCTGCAAGACTGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KAKGLSENPGLLCFCARGVDVFK*SCKTES Trigger: GGACTCAGTCTTGCAGCTCCATTTGAAGACATCTAC...TCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTTTTGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR TCA 90 bp | ATGGAAGTGGCTCCCAGAGAAGAAAAGCAATTGTGGAGAGCCTGGAAGTCAACTGAAGTATCCAGTCCATaGACTGGAGCACCACGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: MEVAPREEKQLWRAWKSTEVSSP*TGAPRV Trigger: AACCCGTGGTGCTCCAGTTCATGGACTGGATACTTC...AGTTGACTTCCAGGCTCTCCACAATTGCTTTTCTTCTCTGGGAGCCACTTCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR TCA 90 bp | CTTAGTGATACTCCTGCCGACCCCCAGTGCACAGTGGGGTTTAAATTCCATTCCATAGTCGCCCTTGTTTaGGAAGACAGCCATGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSDTPADPQCTVGFKFHSIVALV*EDSHED Trigger: ATCCTCATGGCTGTCTTCTCAAACAAGGGCGACTAT...GGAATGGAATTTAAACCCCACTGTGCACTGGGGGTCGGCAGGAGTATCACTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR GCA 90 bp | CTTAGTGATACTCCTGCCGACCCCCAGTGCACAGTGGGGTTTAAATTCCATTCCTTTGGAGGTAGAAGATaGGGTTCTCCTCAGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSDTPADPQCTVGFKFHSFGGRR*GSPQSR Trigger: CCTACTCTGAGGAGAACCGCATCTTCTACCTCCAAA...GGAATGGAATTTAAACCCCACTGTGCACTGGGGGTCGGCAGGAGTATCACTAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTCTGTCGGTCGGAACATTTTGACTCTCTAAATGCAGTCTTAGTGATACTCGCCCACCAGGGGTTCTaGACCAGAAGTCCCACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFCRSEHFDSLNAVLVILAHQGF*TRSPTR Trigger: TCTGGTGGGACTTCTGGTCCAGAACCCCTGGTGGGC...GAGTATCACTAAGACTGCATTTAGAGAGTCAAAATGTTCCGACCGACAGAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR TCA 90 bp | GTGTTTGAGGCAGGGTTTTTCAGTGTAGTCTTGGCTGTCCAGGAACTCTCTCTGATAGTCGCCCTTGTTTaGGAAGACAGCCATGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VFEAGFFSVVLAVQELSLIVALV*EDSHED Trigger: ATCCTCATGGCTGTCTTCTCAAACAAGGGCGACTAT...CAGAGAGAGTTCCTGGACAGCCAAGACTACACTGAAAAACCCTGCCTCAAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| CDS-3UTR TCA 90 bp | CACAAACTCCAAACAGGAAACTTTCAGCTCAAACACTGGAAATCCAGACTTTCCCTCCGAAGTAGGCAGTaGACAGGGCACAGGCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HKLQTGNFQLKHWKSRLSLRSRQ*TGHRQE Trigger: CTCTTGCCTGTGCCCTGTTCACTGCCTACTTCGGAG...GGAAAGTCTGGATTTCCAGTGTTTGAGCTGAAAGTTTCCTGTTTGGAGTTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| CDS-3UTR GCA 90 bp | GCAAGCAAAAGAATGGATCGCCGAGAGTATGGAAGTGGCTCCCAGAGAAGAAAAGTCTTCAAATGGAGCTaGAAGACTGAGTCCCGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: ASKRMDRREYGSGSQRRKVFKWS*KTESRD Trigger: ATCGCGGGACTCAGTCTTGCAGCTCCATTTGAAGAC...TTTTCTTCTCTGGGAGCCACTTCCATACTCTCGGCGATCCATTCTTTTGCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR GCA 90 bp | GCAAGCAAAAGAATGGATCGCCGAGAGTATGGAAGTGGCTCCCAGAGAAGAAAAGAACATCCCTCCAATTaGAATGCAGGCCAGAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASKRMDRREYGSGSQRRKEHPSN*NAGQRA Trigger: AGCTCTCTGGCCTGCATTGCAATTGGAGGGATGTTC...TTTTCTTCTCTGGGAGCCACTTCCATACTCTCGGCGATCCATTCTTTTGCTTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACAAGAAGCAAGCAAAAGAATGGATCGCCGAGAGTATGGAAGTGGCTCCCAGAGGGCTGTCAGAGTaGAGACCACAGTTCCTACAC | + |
|
Preference number: 4 (lower is better) Translates to: KNKKQAKEWIAESMEVAPRGLSE*RPQFLH Trigger: GTGTAGGAACTGTGGTCTCCACTCTGACAGCCCTCT...GGGAGCCACTTCCATACTCTCGGCGATCCATTCTTTTGCTTGCTTCTTGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTGAAAGCAAAAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCGCATCCTGTAGATGTTaGGATTTTTCGTGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILKAKGLSENPGLLCFCAASCRC*DFSWSA Trigger: TGCTGACCACGAAAAATCCCAACATCTACAGGATGC...GGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTTTTGCTTTCAGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTCTGTCGGTCGGAACATTTTGACTCTCTAAATGCAGTCTTAGTGATACTCCGTAGCCAAGTACTTTaGAGCCACACCTTCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SFCRSEHFDSLNAVLVILRSQVL*SHTFSR Trigger: GCGGGAGAAGGTGTGGCTTCAAAGTACTTGGCTACG...GAGTATCACTAAGACTGCATTTAGAGAGTCAAAATGTTCCGACCGACAGAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR TCA 90 bp | TCCTTCTGTCGGTCGGAACATTTTGACTCTCTAAATGCAGTCTTAGTGATACTCGTAGTGTCCTGTGGCTaGCAGGTACATCGACAACGC | + |
|
Preference number: 4 (lower is better) Translates to: SFCRSEHFDSLNAVLVILVVSCG*QVHRQR Trigger: GCGTTGTCGATGTACCTGTCAGCCACAGGACACTAC...GAGTATCACTAAGACTGCATTTAGAGAGTCAAAATGTTCCGACCGACAGAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTCTGTCGGTCGGAACATTTTGACTCTCTAAATGCAGTCTTAGTGATACTCGATCCAATAGCAGCGTaGAGGCACATGAGTGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SFCRSEHFDSLNAVLVILDPIAA*RHMSGE Trigger: CTCCCCACTCATGTGCCTGCACGCTGCTATTGGATC...GAGTATCACTAAGACTGCATTTAGAGAGTCAAAATGTTCCGACCGACAGAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR GCA 90 bp | GCAAGCAAAAGAATGGATCGCCGAGAGTATGGAAGTGGCTCCCAGAGAAGAAAATTTGGAGGTAGAAGATaGGGTTCTCCTCAGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASKRMDRREYGSGSQRRKFGGRR*GSPQSR Trigger: CCTACTCTGAGGAGAACCGCATCTTCTACCTCCAAA...TTTTCTTCTCTGGGAGCCACTTCCATACTCTCGGCGATCCATTCTTTTGCTTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTTGAGGCAGGGTTTTTCAGTGTAGTCTTGGCTGTCCAGGAACTCTCTCTGGCATCCTGTAGATGTTaGGATTTTTCGTGGTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VFEAGFFSVVLAVQELSLASCRC*DFSWSA Trigger: TGCTGACCACGAAAAATCCCAACATCTACAGGATGC...CAGAGAGAGTTCCTGGACAGCCAAGACTACACTGAAAAACCCTGCCTCAAACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| CDS-3UTR CCA 90 bp | ATGGAAGTGGCTCCCAGAGAAGAAAAGCAATTGTGGAGAGCCTGGAAGTCAACTTGGGACTATCTTCCATaGCTATCTCTTCCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: MEVAPREEKQLWRAWKSTWDYLP*LSLPLA Trigger: AGCCAGAGGAAGAGATAGCCATGGAAGATAGTCCCA...AGTTGACTTCCAGGCTCTCCACAATTGCTTTTCTTCTCTGGGAGCCACTTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160292.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTCTGTCGGTCGGAACATTTTGACTCTCTAAATGCAGTCTTAGTGATACTCGAAGTATCCAGTCCATaGACTGGAGCACCACGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SFCRSEHFDSLNAVLVILEVSSP*TGAPRV Trigger: AACCCGTGGTGCTCCAGTTCATGGACTGGATACTTC...GAGTATCACTAAGACTGCATTTAGAGAGTCAAAATGTTCCGACCGACAGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR TCA 90 bp | AAAAACAAGAAGCAAGCAAAAGAATGGATCGCCGAGAGTATGGAAGTGGCTCCCATAGTCGCCCTTGTTTaGGAAGACAGCCATGAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: KNKKQAKEWIAESMEVAPIVALV*EDSHED Trigger: ATCCTCATGGCTGTCTTCTCAAACAAGGGCGACTAT...GGGAGCCACTTCCATACTCTCGGCGATCCATTCTTTTGCTTGCTTCTTGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR GCA 90 bp | AAAAACAAGAAGCAAGCAAAAGAATGGATCGCCGAGAGTATGGAAGTGGCTCCCTTTGGAGGTAGAAGATaGGGTTCTCCTCAGAGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KNKKQAKEWIAESMEVAPFGGRR*GSPQSR Trigger: CCTACTCTGAGGAGAACCGCATCTTCTACCTCCAAA...GGGAGCCACTTCCATACTCTCGGCGATCCATTCTTTTGCTTGCTTCTTGTTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR GCA 90 bp | TCCTTCTGTCGGTCGGAACATTTTGACTCTCTAAATGCAGTCTTAGTGATACTCGAAGCCTTCTGGCGCTaGCTTATCGCCTCTATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFCRSEHFDSLNAVLVILEAFWR*LIASIS Trigger: GGAAATAGAGGCGATAAGGCAGCGCCAGAAGGCTTC...GAGTATCACTAAGACTGCATTTAGAGAGTCAAAATGTTCCGACCGACAGAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160292.8 |
||
| 3UTR CAA 72 bp | TGCTCCTCCTACCTCAGTCTCCCTAGTGCTGGGATTTaGGGCACAAGCAACATACTTGTCAGGAAAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSSYLSLPSAGI*GTSNILVRKKK Trigger: TTTCTTTTTCCTGACAAGTATGTTGCTTGTGCCCAAAATCCCAGCACTAGGGAGACTGAGGTAGGAGGAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR CAA 72 bp | AGCTGCGGATTGCCTTCTCAGCACGATTTTCTGCTTTaGGTGTTTGAGGCAGGGTTTTTCAGTGTAGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SCGLPSQHDFLL*VFEAGFFSVVL Trigger: CAAGACTACACTGAAAAACCCTGCCTCAAACACCAAAAGCAGAAAATCGTGCTGAGAAGGCAATCCGCAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| CDS-3UTR CCA 90 bp | TCCTTCTGTCGGTCGGAACATTTTGACTCTCTAAATGCAGTCTTAGTGATACTCATCCAGTCCATGAACTaGAGCACCACGGGTTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFCRSEHFDSLNAVLVILIQSMN*STTGLS Trigger: AGACAAACCCGTGGTGCTCCAGTTCATGGACTGGAT...GAGTATCACTAAGACTGCATTTAGAGAGTCAAAATGTTCCGACCGACAGAAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| 3UTR CAA 72 bp | AACTGTGGCTTCAAAAGGCTCTCGAGGTTGATGAAGTaGCCTTATAAGCACTTAAAAACCCAACACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NCGFKRLSRLMK*PYKHLKTQHTA Trigger: AGCTGTGTGTTGGGTTTTTAAGTGCTTATAAGGCAACTTCATCAACCTCGAGAGCCTTTTGAAGCCACAGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| 3UTR CAA 72 bp | GATTCATTCAACTGTGGCTTCAAAAGGCTCTCGAGGTaGATGAAGTTGCCTTATAAGCACTTAAAAACCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DSFNCGFKRLSR*MKLPYKHLKTQ Trigger: TTGGGTTTTTAAGTGCTTATAAGGCAACTTCATCAACCTCGAGAGCCTTTTGAAGCCACAGTTGAATGAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000091813.12 |
||
| CDS-3UTR CAA 90 bp | ATCACCACCCAGCTGGAGAGCTGGGGACTAGCGCTCTGGTCAACCTGCCCCACTTATCGCCGATCTGTCTaGGCTAAGCAAGAGGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ITTQLESWGLALWSTCPTYRRSV*AKQEGC Trigger: ACAGCCCTCTTGCTTAGCCAAGACAGATCGGCGATA...AGTGGGGCAGGTTGACCAGAGCGCTAGTCCCCAGCTCTCCAGCTGGGTGGTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS GCA 90 bp | GAAGGACCAGGTACAAGCTGGCAGGTGAACCACAGCCATCAGGTGTaGCATACAGGCTCCGAAGTAGGCAGTGAACAGGGCACAGGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: EGPGTSWQVNHSHQV*HTGSEVGSEQGTGK Trigger: CTTGCCTGTGCCCTGTTCACTGCCTACTTCGGAGCCTGTATGGCACACCTGATGGCTGTGGTTCACCTGCCAGCTTGTACCTGGTCCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS TCA 90 bp | GCTCCTGTTCTCGCCACCTTTGTGCCAGGGCCAAGCTTAGACGTCTaGAGCCTTCTGGCGCTGCCTTATCGCCTCTATTTCCGAAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: APVLATFVPGPSLDV*SLLALPYRLYFRKG Trigger: ACCCTTTCGGAAATAGAGGCGATAAGGCAGCGCCAGAAGGCTTCAGACGTCTAAGCTTGGCCCTGGCACAAAGGTGGCGAGAACAGGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160292.8 |
||
| CDS GCA 90 bp | AGACTGAGTCCCGCGATGACACCCAGCAACGATCCAATAGCAGCGTaGAGGCACATGAGTGGGGAGGAGAGCAGGATAGCACATAGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: RLSPAMTPSNDPIAA*RHMSGEESRIAHRK Trigger: TTTCCTATGTGCTATCCTGCTCTCCTCCCCACTCATGTGCCTGCACGCTGCTATTGGATCGTTGCTGGGTGTCATCGCGGGACTCAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CAA 90 bp | AAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGATTCTGCATATCGCCGATCTGTCTaGGCTAAGCAAGAGGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KASPRTLGCFVSVPVDSAYRRSV*AKQEGC Trigger: ACAGCCCTCTTGCTTAGCCAAGACAGATCGGCGATA...TGCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGATTCTGCATCGACAACGCCATGTaGAAAGGGAGAGTGAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: KGLSENPGLLCFCARGFCIDNAM*KGRVKT Trigger: CGTCTTCACTCTCCCTTTCAACATGGCGTTGTCGAT...GCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS TCA 90 bp | ATATCAGCCACCAGAAATAGTCGCCCTTGTTTGAGAAGACAGCCATaGGGATGCCTACCAGGGTGGCATTGTAACCTTGGAGCCCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISATRNSRPCLRRQP*GCLPGWHCNLGAPL Trigger: CAGCGGGGCTCCAAGGTTACAATGCCACCCTGGTAGGCATCCTCATGGCTGTCTTCTCAAACAAGGGCGACTATTTCTGGTGGCTGATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS CCA 90 bp | ACCAGAATCAGGATTCCACTGATGGGGTTGCTGACAAACACCACCTaGGATATGCCACGAAGTATCCAGTCCATGAACTGGAGCACCACG | + |
|
Preference number: 5 (lower is better) Translates to: TRIRIPLMGLLTNTT*DMPRSIQSMNWSTT Trigger: CGTGGTGCTCCAGTTCATGGACTGGATACTTCGTGGCATATCCCAGGTGGTGTTTGTCAGCAACCCCATCAGTGGAATCCTGATTCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CAA 90 bp | CTTAGTGATACTCCTGCCGACCCCCAGTGCACAGTGGGGTTTAAATTCCATTCCTATCGCCGATCTGTCTaGGCTAAGCAAGAGGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSDTPADPQCTVGFKFHSYRRSV*AKQEGC Trigger: ACAGCCCTCTTGCTTAGCCAAGACAGATCGGCGATA...GGAATGGAATTTAAACCCCACTGTGCACTGGGGGTCGGCAGGAGTATCACTAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS CCA 90 bp | ACAAACACCACCTGGGATATGCCACGAAGTATCCAGTCCATGAACTaGAGCACCACGGGTTTGTCTTTCAGCCAGTTGGCGAATTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: TNTTWDMPRSIQSMN*STTGLSFSQLANSF Trigger: GAAGGAATTCGCCAACTGGCTGAAAGACAAACCCGTGGTGCTCCAGTTCATGGACTGGATACTTCGTGGCATATCCCAGGTGGTGTTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CAA 90 bp | ATTCTGAAAGCAAAAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCATCGACAACGCCATGTaGAAAGGGAGAGTGAAGACG | + |
|
Preference number: 5 (lower is better) Translates to: ILKAKGLSENPGLLCFCAIDNAM*KGRVKT Trigger: CGTCTTCACTCTCCCTTTCAACATGGCGTTGTCGAT...GGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTTTTGCTTTCAGAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS TCA 90 bp | AGCAGATACAGGGAATATCAGCCACCAGAAATAGTCGCCCTTGTTTaGGAAGACAGCCATGAGGATGCCTACCAGGGTGGCATTGTAACC | + |
|
Preference number: 5 (lower is better) Translates to: SRYREYQPPEIVALV*EDSHEDAYQGGIVT Trigger: GGTTACAATGCCACCCTGGTAGGCATCCTCATGGCTGTCTTCTCAAACAAGGGCGACTATTTCTGGTGGCTGATATTCCCTGTATCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CAA 90 bp | TCTGAAAGCAAAAGGCCTCTCCGAGAACCCTGGGCTGCTTTGTTTCTGTGCCCGCATCCTTTTCTTGTTTaGGAGGTAGAAGATGCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SESKRPLREPWAALFLCPHPFLV*EVEDAV Trigger: AACCGCATCTTCTACCTCCAAAACAAGAAAAGGATG...CGGGCACAGAAACAAAGCAGCCCAGGGTTCTCGGAGAGGCCTTTTGCTTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS CCA 90 bp | TGTAGATGTTGGGATTTTTCGTGGTCAGCAAGAGAAAGAGTAGTGTaGCCAAACAGAAGGACCAGGTACAAGCTGGCAGGTGAACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: CRCWDFSWSARERVV*PNRRTRYKLAGEPQ Trigger: CTGTGGTTCACCTGCCAGCTTGTACCTGGTCCTTCTGTTTGGCCACACTACTCTTTCTCTTGCTGACCACGAAAAATCCCAACATCTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CAA 90 bp | AGAACCCTGGGCTGCTTTGTTTCTGTGCCCGTGGATTCTGCAAGGCTTACATGGCATCCTTTTCTTGTTTaGGAGGTAGAAGATGCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RTLGCFVSVPVDSARLTWHPFLV*EVEDAV Trigger: AACCGCATCTTCTACCTCCAAAACAAGAAAAGGATG...CCATGTAAGCCTTGCAGAATCCACGGGCACAGAAACAAAGCAGCCCAGGGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGCAAAAGAATGGATCGCCGAGAGTATGGAAGTGGCTCCCAGAGAAGAAAACATCCTTTTCTTGTTTaGGAGGTAGAAGATGCGGTT | + |
|
Preference number: 5 (lower is better) Translates to: ASKRMDRREYGSGSQRRKHPFLV*EVEDAV Trigger: AACCGCATCTTCTACCTCCAAAACAAGAAAAGGATG...TTTTCTTCTCTGGGAGCCACTTCCATACTCTCGGCGATCCATTCTTTTGCTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS TCA 72 bp | CCATCAGGTGTGCCATACAGGCTCCGAAGTAGGCAGTaGACAGGGCACAGGCAAGAGCCAGGAGGTGGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSGVPYRLRSRQ*TGHRQEPGGGS Trigger: AGACCCACCTCCTGGCTCTTGCCTGTGCCCTGTTCACTGCCTACTTCGGAGCCTGTATGGCACACCTGATGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS GCA 72 bp | GCCTACCAGGGTGGCATTGTAACCTTGGAGCCCCGCTaGTATCGCCGATCTGTCTTGGCTAAGCAAGAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AYQGGIVTLEPR*YRRSVLAKQEG Trigger: GCCCTCTTGCTTAGCCAAGACAGATCGGCGATAGCAGCGGGGCTCCAAGGTTACAATGCCACCCTGGTAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS GCA 72 bp | CCCGCGATGACACCCAGCAACGATCCAATAGCAGCGTaGAGGCACATGAGTGGGGAGGAGAGCAGGATAGCA | + |
|
Preference number: 6 (lower is better) Translates to: PAMTPSNDPIAA*RHMSGEESRIA Trigger: TGCTATCCTGCTCTCCTCCCCACTCATGTGCCTGCACGCTGCTATTGGATCGTTGCTGGGTGTCATCGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS GCA 72 bp | GGTACAAGCTGGCAGGTGAACCACAGCCATCAGGTGTaGCATACAGGCTCCGAAGTAGGCAGTGAACAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTSWQVNHSHQV*HTGSEVGSEQG Trigger: GCCCTGTTCACTGCCTACTTCGGAGCCTGTATGGCACACCTGATGGCTGTGGTTCACCTGCCAGCTTGTACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS CAA 72 bp | GTAACCTTGGAGCCCCGCTGCTATCGCCGATCTGTCTaGGCTAAGCAAGAGGGCTGTCAGAGTGGAGACCAC | + |
|
Preference number: 6 (lower is better) Translates to: VTLEPRCYRRSV*AKQEGCQSGDH Trigger: GTGGTCTCCACTCTGACAGCCCTCTTGCTTAGCCAAGACAGATCGGCGATAGCAGCGGGGCTCCAAGGTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS CAA 72 bp | AGCCATGAGGATGCCTACCAGGGTGGCATTGTAACCTaGGAGCCCCGCTGCTATCGCCGATCTGTCTTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SHEDAYQGGIVT*EPRCYRRSVLA Trigger: AGCCAAGACAGATCGGCGATAGCAGCGGGGCTCCAAGGTTACAATGCCACCCTGGTAGGCATCCTCATGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS CAA 90 bp | GGTGGCATTGTAACCTTGGAGCCCCGCTGCTATCGCCGATCTGTCTaGGCTAAGCAAGAGGGCTGTCAGAGTGGAGACCACAGTTCCTAC | + |
|
Preference number: 6 (lower is better) Translates to: GGIVTLEPRCYRRSV*AKQEGCQSGDHSSY Trigger: GTAGGAACTGTGGTCTCCACTCTGACAGCCCTCTTGCTTAGCCAAGACAGATCGGCGATAGCAGCGGGGCTCCAAGGTTACAATGCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS CCA 72 bp | GTTCCTACACAGCCACAGAGAGCCCACCAGGGGTTCTaGACCAGAAGTCCCACCAGAATCAGGATTCCACTG | + |
|
Preference number: 6 (lower is better) Translates to: VPTQPQRAHQGF*TRSPTRIRIPL Trigger: CAGTGGAATCCTGATTCTGGTGGGACTTCTGGTCCAGAACCCCTGGTGGGCTCTCTGTGGCTGTGTAGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS CCA 72 bp | ACCTGGGATATGCCACGAAGTATCCAGTCCATGAACTaGAGCACCACGGGTTTGTCTTTCAGCCAGTTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: TWDMPRSIQSMN*STTGLSFSQLA Trigger: CGCCAACTGGCTGAAAGACAAACCCGTGGTGCTCCAGTTCATGGACTGGATACTTCGTGGCATATCCCAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS TCA 72 bp | ACACCACCTGGGATATGCCACGAAGTATCCAGTCCATaGACTGGAGCACCACGGGTTTGTCTTTCAGCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: TPPGICHEVSSP*TGAPRVCLSAS Trigger: ACTGGCTGAAAGACAAACCCGTGGTGCTCCAGTTCATGGACTGGATACTTCGTGGCATATCCCAGGTGGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS TCA 72 bp | AGGGAATATCAGCCACCAGAAATAGTCGCCCTTGTTTaGGAAGACAGCCATGAGGATGCCTACCAGGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: REYQPPEIVALV*EDSHEDAYQGG Trigger: GCCACCCTGGTAGGCATCCTCATGGCTGTCTTCTCAAACAAGGGCGACTATTTCTGGTGGCTGATATTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS CCA 72 bp | GTTGAAACCCCAGAGCCCAAAGTAGATGTCTTCAAATaGAGCTGCAAGACTGAGTCCCGCGATGACACCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VETPEPKVDVFK*SCKTESRDDTQ Trigger: CTGGGTGTCATCGCGGGACTCAGTCTTGCAGCTCCATTTGAAGACATCTACTTTGGGCTCTGGGGTTTCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS CAA 90 bp | TTCTGGACCAGAAGTCCCACCAGAATCAGGATTCCACTGATGGGGTaGCTGACAAACACCACCTGGGATATGCCACGAAGTATCCAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: FWTRSPTRIRIPLMG*LTNTTWDMPRSIQS Trigger: GGACTGGATACTTCGTGGCATATCCCAGGTGGTGTTTGTCAGCAACCCCATCAGTGGAATCCTGATTCTGGTGGGACTTCTGGTCCAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS CCA 72 bp | AGGATTCCACTGATGGGGTTGCTGACAAACACCACCTaGGATATGCCACGAAGTATCCAGTCCATGAACTGG | + |
|
Preference number: 6 (lower is better) Translates to: RIPLMGLLTNTT*DMPRSIQSMNW Trigger: CCAGTTCATGGACTGGATACTTCGTGGCATATCCCAGGTGGTGTTTGTCAGCAACCCCATCAGTGGAATCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS CAA 72 bp | AGAAGTCCCACCAGAATCAGGATTCCACTGATGGGGTaGCTGACAAACACCACCTGGGATATGCCACGAAGT | + |
|
Preference number: 6 (lower is better) Translates to: RSPTRIRIPLMG*LTNTTWDMPRS Trigger: ACTTCGTGGCATATCCCAGGTGGTGTTTGTCAGCAACCCCATCAGTGGAATCCTGATTCTGGTGGGACTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS TCA 72 bp | ACCAGAAATAGTCGCCCTTGTTTGAGAAGACAGCCATaGGGATGCCTACCAGGGTGGCATTGTAACCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: TRNSRPCLRRQP*GCLPGWHCNLG Trigger: TCCAAGGTTACAATGCCACCCTGGTAGGCATCCTCATGGCTGTCTTCTCAAACAAGGGCGACTATTTCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS CAA 72 bp | CGAAGTATCCAGTCCATGAACTGGAGCACCACGGGTTaGTCTTTCAGCCAGTTGGCGAATTCCTTCATGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RSIQSMNWSTTG*SFSQLANSFMS Trigger: TGACATGAAGGAATTCGCCAACTGGCTGAAAGACAAACCCGTGGTGCTCCAGTTCATGGACTGGATACTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||
| CDS TCA 72 bp | TTTACTTGGGAAAAACGTATTGTAGTGTCCTGTGGCTaGCAGGTACATCGACAACGCCATGTTGAAAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: FTWEKRIVVSCG*QVHRQRHVERE Trigger: CTCCCTTTCAACATGGCGTTGTCGATGTACCTGTCAGCCACAGGACACTACAATACGTTTTTCCCAAGTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000091813.12 ENSMUST00000160292.8 ENSMUST00000160639.2 |
||