Pregenerated sensors for SLC13A5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020805Ensembl transcript IDs: ENSMUST00000021161.14, ENSMUST00000137701.3, ENSMUST00000140167.3, ENSMUST00000208056.2, ENSMUST00000208912.2
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCCCTGGATGGGAAGTTCTCTCGTGGTGATAGATATGATGATCTaGGGACATCCAGAAGAGGCACCAGGACGGGGCTCCCAGCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: LPWMGSSLVVIDMMI*GHPEEAPGRGSQPG Trigger: GCCAGGCTGGGAGCCCCGTCCTGGTGCCTCTTCTGGATGTCCCCAGATCATCATATCTATCACCACGAGAGAACTTCCCATCCAGGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR CCA 90 bp | GGAGCCAGTAGTCTGTCAAAGCCACATAGTACAAGATTTGAGCCCTaGTCCCTCTGGTTCCTGCCTGTCCCAGGAGAGATGGAAGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: GASSLSKPHSTRFEP*SLWFLPVPGEMEGS Trigger: GGACCCTTCCATCTCTCCTGGGACAGGCAGGAACCAGAGGGACCAGGGCTCAAATCTTGTACTATGTGGCTTTGACAGACTACTGGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR CCA 90 bp | AGGAGTGAGCAGGAGGGCCTGATGTTAGCACCTCAGACTACTCAATaGTTGGTGGTGGCACCATGCAGAGTCCAAGTTTTCAGGAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: RSEQEGLMLAPQTTQ*LVVAPCRVQVFRRP Trigger: TGGCCTCCTGAAAACTTGGACTCTGCATGGTGCCACCACCAACCATTGAGTAGTCTGAGGTGCTAACATCAGGCCCTCCTGCTCACTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR GCA 90 bp | CAAAGCCACATAGTACAAGATTTGAGCCCTGGTCCCTCTGGTTCCTaGCTGTCCCAGGAGAGATGGAAGGGTCCTAGTAAAGATGGGCCT | + |
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Preference number: 1 (lower is better) Translates to: QSHIVQDLSPGPSGS*LSQERWKGPSKDGP Trigger: AGGCCCATCTTTACTAGGACCCTTCCATCTCTCCTGGGACAGGCAGGAACCAGAGGGACCAGGGCTCAAATCTTGTACTATGTGGCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR TCA 90 bp | CAGACCAGTCAGCACACTGGAACTTTCCATAGCAGACAGAGTATTTaGCAAGAGCAAGCCTTCAACAGTGTGGTCAGGAGTCATCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: QTSQHTGTFHSRQSI*QEQAFNSVVRSHPS Trigger: GGAGGGATGACTCCTGACCACACTGTTGAAGGCTTGCTCTTGTCAAATACTCTGTCTGCTATGGAAAGTTCCAGTGTGCTGACTGGTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| 3UTR TCA 90 bp | GTAGATCTTCTTGGGGTGTTGACATCATTGGATCACACTAGAGTGTaGGCACCAGTGCTCTGTGCAAGGTGTGCCAGAAGGTTCATAGTC | + |
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Preference number: 1 (lower is better) Translates to: VDLLGVLTSLDHTRV*APVLCARCARRFIV Trigger: GACTATGAACCTTCTGGCACACCTTGCACAGAGCACTGGTGCTCACACTCTAGTGTGATCCAATGATGTCAACACCCCAAGAAGATCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR CCA 90 bp | CTCTCACTCTGGCAGTGGGAAGTGTTTAAGATCAGAGTTCTGCCCTaGATGGGAAGTTCTCTCGTGGTGATAGATATGATGATCTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: LSLWQWEVFKIRVLP*MGSSLVVIDMMIWG Trigger: TCCCCAGATCATCATATCTATCACCACGAGAGAACTTCCCATCCAGGGCAGAACTCTGATCTTAAACACTTCCCACTGCCAGAGTGAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR GCA 90 bp | GGACATCCAGAAGAGGCACCAGGACGGGGCTCCCAGCCTGGCAATCCGCTCCCCGCTCTGTGCAAGGTGTaGCAGAAGGTTCATAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: GHPEEAPGRGSQPGNPLPALCKV*QKVHSP Trigger: AGGACTATGAACCTTCTGGCACACCTTGCACAGAGC...GGGGAGCGGATTGCCAGGCTGGGAGCCCCGTCCTGGTGCCTCTTCTGGATGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR GCA 90 bp | CAGCCAGTTTACTCTGGCAGGGTCTGTCTGCTCAGACACCAAGAAGCACGCTGCGGGACAGACAAACTGTaGAGTGGCCCAGCCCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: QPVYSGRVCLLRHQEARCGTDKL*SGPALG Trigger: TCCAAGGGCTGGGCCACTGCACAGTTTGTCTGTCCC...GCAGCGTGCTTCTTGGTGTCTGAGCAGACAGACCCTGCCAGAGTAAACTGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR CCA 90 bp | GGACATCCAGAAGAGGCACCAGGACGGGGCTCCCAGCCTGGCAATCCGCTCCCCTTGGGTAGATCTTCTTaGGGTGTTGACATCATTGGA | + |
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Preference number: 2 (lower is better) Translates to: GHPEEAPGRGSQPGNPLPLGRSS*GVDIIG Trigger: TCCAATGATGTCAACACCCCAAGAAGATCTACCCAA...GGGGAGCGGATTGCCAGGCTGGGAGCCCCGTCCTGGTGCCTCTTCTGGATGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCAGCCCTTGGAAATGAGCCGCTCAATGGTTGGTGGTaGCACCATGCAGAGTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: SPTGTDKLCSGPALGNEPLNGWW*HHAESK Trigger: CTTGGACTCTGCATGGTGCCACCACCAACCATTGAG...CGGCTCATTTCCAAGGGCTGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR GCA 90 bp | TTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCAAGCACCAGTGCTCTGTaGAAGGTGTGCCAGAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: FPEELKSPTGTDKLCSGPSTSAL*KVCQKV Trigger: AACCTTCTGGCACACCTTGCACAGAGCACTGGTGCT...TGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR TCA 90 bp | CAGCCGGCAAGGGAAAGGCCTTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGATCTTCTTGGGGTGTTaGCATCATTGGATCACACTA | + |
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Preference number: 2 (lower is better) Translates to: QPARERPSQRSSRVQRGQIFLGC*HHWITL Trigger: TAGTGTGATCCAATGATGTCAACACCCCAAGAAGAT...CTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAAGGCCTTTCCCTTGCCGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR TCA 90 bp | AGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCAGCCCTTGGAAATGAGCCGGGTTCCTTTCCCTTCTaGGCTTATCTTCCCATCATC | + |
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Preference number: 2 (lower is better) Translates to: SPTGTDKLCSGPALGNEPGSFPF*AYLPII Trigger: GATGATGGGAAGATAAGCTCAGAAGGGAAAGGAACC...CGGCTCATTTCCAAGGGCTGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCCGGCAAGGGAAAGGCCTTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGTTGGGTAGATCTTCTTaGGGTGTTGACATCATTGGA | + |
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Preference number: 2 (lower is better) Translates to: QPARERPSQRSSRVQRGQLGRSS*GVDIIG Trigger: TCCAATGATGTCAACACCCCAAGAAGATCTACCCAA...CTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAAGGCCTTTCCCTTGCCGGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR CAA 90 bp | ATCCCACTTGAACACCATCTCCCAAAGAGACACCACTGTCCATCCTaGAAGTGTGATCCCAGCCGCACCAGGCTGGCAGGACAAGAATTC | + |
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Preference number: 2 (lower is better) Translates to: IPLEHHLPKRHHCPS*KCDPSRTRLAGQEF Trigger: GAATTCTTGTCCTGCCAGCCTGGTGCGGCTGGGATCACACTTCAAGGATGGACAGTGGTGTCTCTTTGGGAGATGGTGTTCAAGTGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGGACAGAGAGCAACTGTTTATTCATCTGCCTCCCTCTGTCTCCTTCACAAGGGGACAGACAAACTGTaGAGTGGCCCAGCCCTTGGA | + |
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Preference number: 2 (lower is better) Translates to: GGQRATVYSSASLCLLHKGTDKL*SGPALG Trigger: TCCAAGGGCTGGGCCACTGCACAGTTTGTCTGTCCC...CTTGTGAAGGAGACAGAGGGAGGCAGATGAATAAACAGTTGCTCTCTGTCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCACCATGCAGAGTCCAAGTTTTCAGGAGGCCATGACTCCCACTCTCACTATCAGAGTTCTGCCCTaGATGGGAAGTTCTCTCGTG | + |
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Preference number: 2 (lower is better) Translates to: GGTMQSPSFQEAMTPTLTIRVLP*MGSSLV Trigger: CACGAGAGAACTTCCCATCCAGGGCAGAACTCTGAT...AGTGAGAGTGGGAGTCATGGCCTCCTGAAAACTTGGACTCTGCATGGTGCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGGACAGAGAGCAACTGTTTATTCATCTGCCTCCCTCTGTCTCCTTCACAAGACCACTGTCCATCCTTaGAGTGTGATCCCAGCCGCA | + |
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Preference number: 2 (lower is better) Translates to: GGQRATVYSSASLCLLHKTTVHP*SVIPAA Trigger: TGCGGCTGGGATCACACTTCAAGGATGGACAGTGGT...CTTGTGAAGGAGACAGAGGGAGGCAGATGAATAAACAGTTGCTCTCTGTCCACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| 3UTR-3UTR GCA 90 bp | CACAAGGTACAAAATCACAGACCAGTCAGCACACTGGAACTTTCCATAGCAGACGGTCCCTCTGGTTCCTaGCTGTCCCAGGAGAGATGG | + |
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Preference number: 2 (lower is better) Translates to: HKVQNHRPVSTLELSIADGPSGS*LSQERW Trigger: CCATCTCTCCTGGGACAGGCAGGAACCAGAGGGACC...GTCTGCTATGGAAAGTTCCAGTGTGCTGACTGGTCTGTGATTTTGTACCTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| 3UTR-3UTR CCA 90 bp | AGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCAGCCCTTGGAAATGAGCCGATAGATATGATGATCTaGGGACATCCAGAAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SPTGTDKLCSGPALGNEPIDMMI*GHPEEA Trigger: TGCCTCTTCTGGATGTCCCCAGATCATCATATCTAT...CGGCTCATTTCCAAGGGCTGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR CCA 90 bp | GCTGAAGGAGGGCTTACTGGGGAGCTGGGAAGGGAGCTCAAACTGTTAATGAATCTCAATGGTTGGTGGTaGCACCATGCAGAGTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: AEGGLTGELGRELKLLMNLNGWW*HHAESK Trigger: CTTGGACTCTGCATGGTGCCACCACCAACCATTGAG...ATTCATTAACAGTTTGAGCTCCCTTCCCAGCTCCCCAGTAAGCCCTCCTTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGAAGGAGGGCTTACTGGGGAGCTGGGAAGGGAGCTCAAACTGTTAATGAATGCTCTGTGCAAGGTGTaGCAGAAGGTTCATAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: AEGGLTGELGRELKLLMNALCKV*QKVHSP Trigger: AGGACTATGAACCTTCTGGCACACCTTGCACAGAGC...ATTCATTAACAGTTTGAGCTCCCTTCCCAGCTCCCCAGTAAGCCCTCCTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGGCACCATGCAGAGTCCAAGTTTTCAGGAGGCCATGACTCCCACTCTCACTTTAAGATCAGAGTTCTaGCCTGGATGGGAAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: GGTMQSPSFQEAMTPTLTLRSEF*PGWEVL Trigger: GAGAACTTCCCATCCAGGGCAGAACTCTGATCTTAA...AGTGAGAGTGGGAGTCATGGCCTCCTGAAAACTTGGACTCTGCATGGTGCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGGCACCATGCAGAGTCCAAGTTTTCAGGAGGCCATGACTCCCACTCTCACTATCTTCTTGGGGTGTTaGCATCATTGGATCACACTA | + |
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Preference number: 2 (lower is better) Translates to: GGTMQSPSFQEAMTPTLTIFLGC*HHWITL Trigger: TAGTGTGATCCAATGATGTCAACACCCCAAGAAGAT...AGTGAGAGTGGGAGTCATGGCCTCCTGAAAACTTGGACTCTGCATGGTGCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAAAGACAACGGAGAGCTTCCTCTCCTGTCTCCCTTTCATATGATGGACACTAGCACCAGTGCTCTGTaGAAGGTGTGCCAGAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: LKDNGELPLLSPFHMMDTSTSAL*KVCQKV Trigger: AACCTTCTGGCACACCTTGCACAGAGCACTGGTGCT...AGTGTCCATCATATGAAAGGGAGACAGGAGAGGAAGCTCTCCGTTGTCTTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGACACCAAGAAGCACGCTGCTCCTTCTCAGCCATGCTCTGTTGCTACCAGTTTAAGATCAGAGTTCTaGCCTGGATGGGAAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: SDTKKHAAPSQPCSVATSLRSEF*PGWEVL Trigger: GAGAACTTCCCATCCAGGGCAGAACTCTGATCTTAA...ACTGGTAGCAACAGAGCATGGCTGAGAAGGAGCAGCGTGCTTCTTGGTGTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGGCACCATGCAGAGTCCAAGTTTTCAGGAGGCCATGACTCCCACTCTCACTATAGATATGATGATCTaGGGACATCCAGAAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: GGTMQSPSFQEAMTPTLTIDMMI*GHPEEA Trigger: TGCCTCTTCTGGATGTCCCCAGATCATCATATCTAT...AGTGAGAGTGGGAGTCATGGCCTCCTGAAAACTTGGACTCTGCATGGTGCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR TCA 90 bp | GGTGGACAGAGAGCAACTGTTTATTCATCTGCCTCCCTCTGTCTCCTTCACAAGGGTTCCTTTCCCTTCTaGGCTTATCTTCCCATCATC | + |
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Preference number: 2 (lower is better) Translates to: GGQRATVYSSASLCLLHKGSFPF*AYLPII Trigger: GATGATGGGAAGATAAGCTCAGAAGGGAAAGGAACC...CTTGTGAAGGAGACAGAGGGAGGCAGATGAATAAACAGTTGCTCTCTGTCCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| 3UTR-3UTR GCA 90 bp | GAGAGCAACTGTTTATTCATCTGCCTCCCTCTGTCTCCTTCACAAGGTACAAAACACCAAGAAGCACGCTaGTCCTTCTCAGCCATGCTC | + |
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Preference number: 2 (lower is better) Translates to: ESNCLFICLPLSPSQGTKHQEAR*SFSAML Trigger: GAGCATGGCTGAGAAGGAGCAGCGTGCTTCTTGGTG...TTTTGTACCTTGTGAAGGAGACAGAGGGAGGCAGATGAATAAACAGTTGCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| 3UTR-3UTR CCA 90 bp | GCTGAAGGAGGGCTTACTGGGGAGCTGGGAAGGGAGCTCAAACTGTTAATGAATCTCTCACTCTGGCAGTaGGAAGTGTTTAAGATCAGA | + |
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Preference number: 2 (lower is better) Translates to: AEGGLTGELGRELKLLMNLSLWQ*EVFKIR Trigger: TCTGATCTTAAACACTTCCCACTGCCAGAGTGAGAG...ATTCATTAACAGTTTGAGCTCCCTTCCCAGCTCCCCAGTAAGCCCTCCTTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGACAGAGTATTTGACAAGAGCAAGCCTTCAACAGTGTGGTCAGGAGTCATCAATGAATATGAAATATaGAATGAGGCAAGTAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: ADRVFDKSKPSTVWSGVINEYEI*NEASRG Trigger: CCCCCTACTTGCCTCATTTCATATTTCATATTCATT...GATGACTCCTGACCACACTGTTGAAGGCTTGCTCTTGTCAAATACTCTGTCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| 3UTR GCA 72 bp | GAGGAGCTCAAGAGTCCAACGGGGACAGACAAACTGTaGAGTGGCCCAGCCCTTGGAAATGAGCCGGCTGAA | + |
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Preference number: 3 (lower is better) Translates to: EELKSPTGTDKL*SGPALGNEPAE Trigger: TTCAGCCGGCTCATTTCCAAGGGCTGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACTCTTGAGCTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR GCA 72 bp | GGCAGGGTCTGTCTGCTCAGACACCAAGAAGCACGCTaGTCCTTCTCAGCCATGCTCTGTTGCTACCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: GRVCLLRHQEAR*SFSAMLCCYQS Trigger: GGACTGGTAGCAACAGAGCATGGCTGAGAAGGAGCAGCGTGCTTCTTGGTGTCTGAGCAGACAGACCCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR GCA 72 bp | ACTCCCCTCAGCCAGTTTACTCTGGCAGGGTCTGTCTaGTCAGACACCAAGAAGCACGCTGCTCCTTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: TPLSQFTLAGSV*SDTKKHAAPSQ Trigger: CTGAGAAGGAGCAGCGTGCTTCTTGGTGTCTGAGCAGACAGACCCTGCCAGAGTAAACTGGCTGAGGGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR CCA 72 bp | ATGGGAAGTTCTCTCGTGGTGATAGATATGATGATCTaGGGACATCCAGAAGAGGCACCAGGACGGGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: MGSSLVVIDMMI*GHPEEAPGRGS Trigger: GGAGCCCCGTCCTGGTGCCTCTTCTGGATGTCCCCAGATCATCATATCTATCACCACGAGAGAACTTCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR CAA 90 bp | CTGAAAGACAACGGAGAGCTTCCTCTCCTGTCTCCCTTTCATATGATGGACACTGCAGTGGCCCAGCCCTaGGAAATGAGCCGGCTGAAT | + |
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Preference number: 3 (lower is better) Translates to: LKDNGELPLLSPFHMMDTAVAQP*EMSRLN Trigger: ATTCAGCCGGCTCATTTCCAAGGGCTGGGCCACTGC...AGTGTCCATCATATGAAAGGGAGACAGGAGAGGAAGCTCTCCGTTGTCTTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR TCA 72 bp | CTTGGGGTGTTGACATCATTGGATCACACTAGAGTGTaGGCACCAGTGCTCTGTGCAAGGTGTGCCAGAAGG | + |
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Preference number: 3 (lower is better) Translates to: LGVLTSLDHTRV*APVLCARCARR Trigger: CCTTCTGGCACACCTTGCACAGAGCACTGGTGCTCACACTCTAGTGTGATCCAATGATGTCAACACCCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| 3UTR TCA 72 bp | ACAACGGAGAGCTTCCTCTCCTGTCTCCCTTTCATATaGTGGACACTCCCCTCAGCCAGTTTACTCTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: TTESFLSCLPFI*WTLPSASLLWQ Trigger: CTGCCAGAGTAAACTGGCTGAGGGGAGTGTCCATCATATGAAAGGGAGACAGGAGAGGAAGCTCTCCGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR CCA 72 bp | AGTCTGTCAAAGCCACATAGTACAAGATTTGAGCCCTaGTCCCTCTGGTTCCTGCCTGTCCCAGGAGAGATG | + |
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Preference number: 3 (lower is better) Translates to: SLSKPHSTRFEP*SLWFLPVPGEM Trigger: CATCTCTCCTGGGACAGGCAGGAACCAGAGGGACCAGGGCTCAAATCTTGTACTATGTGGCTTTGACAGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR CCA 72 bp | CAGGAGTCATCCCTCCTAAGGAGCCAGGCACATACTTaGTCTTTGATGGGAACTTCTTGGGTCCCCATACTG | + |
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Preference number: 3 (lower is better) Translates to: QESSLLRSQAHT*SLMGTSWVPIL Trigger: CAGTATGGGGACCCAAGAAGTTCCCATCAAAGACCAAGTATGTGCCTGGCTCCTTAGGAGGGATGACTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR CAA 90 bp | GCAGACAGAGTATTTGACAAGAGCAAGCCTTCAACAGTGTGGTCAGGAGTCATCCTCAGCCATGCTCTGTaGCTACCAGTCCTGGCCACA | + |
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Preference number: 3 (lower is better) Translates to: ADRVFDKSKPSTVWSGVILSHAL*LPVLAT Trigger: TGTGGCCAGGACTGGTAGCAACAGAGCATGGCTGAG...GATGACTCCTGACCACACTGTTGAAGGCTTGCTCTTGTCAAATACTCTGTCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| 3UTR GCA 72 bp | ATAGTACAAGATTTGAGCCCTGGTCCCTCTGGTTCCTaGCTGTCCCAGGAGAGATGGAAGGGTCCTAGTAAA | + |
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Preference number: 3 (lower is better) Translates to: IVQDLSPGPSGS*LSQERWKGPSK Trigger: TTTACTAGGACCCTTCCATCTCTCCTGGGACAGGCAGGAACCAGAGGGACCAGGGCTCAAATCTTGTACTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGACACCAAGAAGCACGCTGCTCCTTCTCAGCCATGCTCTGTTGCTACCAGTTCTTCCCATCATCCATaGCCATCTCTGAACTTGATA | + |
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Preference number: 3 (lower is better) Translates to: SDTKKHAAPSQPCSVATSSSHHP*PSLNLI Trigger: TATCAAGTTCAGAGATGGCAATGGATGATGGGAAGA...ACTGGTAGCAACAGAGCATGGCTGAGAAGGAGCAGCGTGCTTCTTGGTGTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| 3UTR-3UTR CAA 90 bp | GGTGGACAGAGAGCAACTGTTTATTCATCTGCCTCCCTCTGTCTCCTTCACAAGTCTTCCCATCATCCATaGCCATCTCTGAACTTGATA | + |
|
Preference number: 3 (lower is better) Translates to: GGQRATVYSSASLCLLHKSSHHP*PSLNLI Trigger: TATCAAGTTCAGAGATGGCAATGGATGATGGGAAGA...CTTGTGAAGGAGACAGAGGGAGGCAGATGAATAAACAGTTGCTCTCTGTCCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
||
| 3UTR CCA 72 bp | TGGCAGTGGGAAGTGTTTAAGATCAGAGTTCTGCCCTaGATGGGAAGTTCTCTCGTGGTGATAGATATGATG | + |
|
Preference number: 3 (lower is better) Translates to: WQWEVFKIRVLP*MGSSLVVIDMM Trigger: CATCATATCTATCACCACGAGAGAACTTCCCATCCAGGGCAGAACTCTGATCTTAAACACTTCCCACTGCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| 3UTR TCA 72 bp | TTTTCAGAGCAAATTAAGCAAGGAAGAGGGTATCACTaGAAGACAACGGAGAGCTTCCTCTCCTGTCTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: FSEQIKQGRGYH*KTTESFLSCLP Trigger: AGGGAGACAGGAGAGGAAGCTCTCCGTTGTCTTTCAGTGATACCCTCTTCCTTGCTTAATTTGCTCTGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR TCA 90 bp | GGACATCCAGAAGAGGCACCAGGACGGGGCTCCCAGCCTGGCAATCCGCTCCCCCCCGACCCCAGGTGTTaGCTGACAGAAACACAGATA | + |
|
Preference number: 4 (lower is better) Translates to: GHPEEAPGRGSQPGNPLPPDPRC*LTETQI Trigger: TATCTGTGTTTCTGTCAGTCAACACCTGGGGTCGGG...GGGGAGCGGATTGCCAGGCTGGGAGCCCCGTCCTGGTGCCTCTTCTGGATGTCC 62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CCA 90 bp | GGACATCCAGAAGAGGCACCAGGACGGGGCTCCCAGCCTGGCAATCCGCTCCCCGCATGGCCTCCACAATaGGTATCATCATGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GHPEEAPGRGSQPGNPLPAWPPQ*VSSWLW Trigger: CCACAGCCATGATGATACCCATTGTGGAGGCCATGC...GGGGAGCGGATTGCCAGGCTGGGAGCCCCGTCCTGGTGCCTCTTCTGGATGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCCTGTCCCAGGAGAGATGGAAGGGTCCTAGTAAAGATGGGCCTCGCGACCCAGTGTCCCCAGGCTaGCCTCCACAGCTGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SCLSQERWKGPSKDGPRDPVSPG*PPQLYW Trigger: CCAATACAGCTGTGGAGGCCAGCCTGGGGACACTGG...GTCGCGAGGCCCATCTTTACTAGGACCCTTCCATCTCTCCTGGGACAGGCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CCA 90 bp | GGTGGCACCATGCAGAGTCCAAGTTTTCAGGAGGCCATGACTCCCACTCTCACTCCAGGAGCACCACGTTaGGTCCCGTCCCGGTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GGTMQSPSFQEAMTPTLTPGAPR*VPSRSR Trigger: CCTTGACCGGGACGGGACCCAACGTGGTGCTCCTGG...AGTGAGAGTGGGAGTCATGGCCTCCTGAAAACTTGGACTCTGCATGGTGCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCGGCAAGGGAAAGGCCTTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGTGGCCACAGGCAACATaGAGGCAAGTGAAGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: QPARERPSQRSSRVQRGQWPQAT*RQVKHS Trigger: TGAGTGCTTCACTTGCCTTCATGTTGCCTGTGGCCA...CTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAAGGCCTTTCCCTTGCCGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR GCA 90 bp | CAGCCGGCAAGGGAAAGGCCTTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGCGTCTCACATCCTTTTaGCATAGCAAACCCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QPARERPSQRSSRVQRGQRLTSF*HSKPSP Trigger: GGGGGAGGGTTTGCTATGGCAAAAGGATGTGAGACG...CTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAAGGCCTTTCCCTTGCCGGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CCA 90 bp | GGACATCCAGAAGAGGCACCAGGACGGGGCTCCCAGCCTGGCAATCCGCTCCCCCCAGGAACAGCATGTTaGTGTCCTTCATGTATTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GHPEEAPGRGSQPGNPLPPGTAC*CPSCIG Trigger: TCCAATACATGAAGGACACCAACATGCTGTTCCTGG...GGGGAGCGGATTGCCAGGCTGGGAGCCCCGTCCTGGTGCCTCTTCTGGATGTCC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCGGCAAGGGAAAGGCCTTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGTATTGCGTGAGGGCTTaGTCCCCACAAAGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPARERPSQRSSRVQRGQYCVRA*SPQRAA Trigger: TGCTGCTCTTTGTGGGGACCAAGCCCTCACGCAATA...CTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAAGGCCTTTCCCTTGCCGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208056.2 |
||
| CDS-3UTR GCA 90 bp | CAGCCGGCAAGGGAAAGGCCTTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGTGGCTGTACCCCCAATaGTGGCTGAATAGCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: QPARERPSQRSSRVQRGQWLYPQ*WLNSKH Trigger: GTGTTTGCTATTCAGCCAGCATTGGGGGTACAGCCA...CTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAAGGCCTTTCCCTTGCCGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGCACCATGCAGAGTCCAAGTTTTCAGGAGGCCATGACTCCCACTCTCACTCTGTGGCGGCAGTATTaGGTGAGGGCTTGGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GGTMQSPSFQEAMTPTLTLWRQY*VRAWSP Trigger: TGGGGACCAAGCCCTCACGCAATACTGCCGCCACAG...AGTGAGAGTGGGAGTCATGGCCTCCTGAAAACTTGGACTCTGCATGGTGCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208056.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCAGCCCTTGGAAATGAGCCGCGTCTCACATCCTTTTaGCATAGCAAACCCTCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SPTGTDKLCSGPALGNEPRLTSF*HSKPSP Trigger: GGGGGAGGGTTTGCTATGGCAAAAGGATGTGAGACG...CGGCTCATTTCCAAGGGCTGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CCA 90 bp | AGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCAGCCCTTGGAAATGAGCCGCCAATCCAGCAGTGCTaGGGGGTAGAACGGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SPTGTDKLCSGPALGNEPPIQQC*GVERSF Trigger: AAAACTCCGTTCTACCCCCCAGCACTGCTGGATTGG...CGGCTCATTTCCAAGGGCTGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| 3UTR CAA 72 bp | GAACACCATCTCCCAAAGAGACACCACTGTCCATCCTaGAAGTGTGATCCCAGCCGCACCAGGCTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EHHLPKRHHCPS*KCDPSRTRLAG Trigger: TCCTGCCAGCCTGGTGCGGCTGGGATCACACTTCAAGGATGGACAGTGGTGTCTCTTTGGGAGATGGTGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCAGTTTACTCTGGCAGGGTCTGTCTGCTCAGACACCAAGAAGCACGCTGCGTGGCATCTGTGATATaGACGGTGTTTCCCTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: QPVYSGRVCLLRHQEARCVASVI*TVFPST Trigger: GGTCGAGGGAAACACCGTTCATATCACAGATGCCAC...GCAGCGTGCTTCTTGGTGTCTGAGCAGACAGACCCTGCCAGAGTAAACTGGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGCCTGTCCCAGGAGAGATGGAAGGGTCCTAGTAAAGATGGGCCTCGCGACCAACATGAAGGCAAGTaGAGCACTCATGGTACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SCLSQERWKGPSKDGPRDQHEGK*STHGTG Trigger: CCCTGTACCATGAGTGCTTCACTTGCCTTCATGTTG...GTCGCGAGGCCCATCTTTACTAGGACCCTTCCATCTCTCCTGGGACAGGCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR GCA 90 bp | TTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCATCAGGAAACAATTCCTaGATCTGGCCCAGGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: FPEELKSPTGTDKLCSGPSGNNS*IWPRST Trigger: GGTGCTCCTGGGCCAGATGCAGGAATTGTTTCCTGA...TGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCAGGAGGTAACAGCCACTaGGATGACATCTGTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FPEELKSPTGTDKLCSGPGGNSH*DDICAP Trigger: TGGTGCACAGATGTCATCCCAGTGGCTGTTACCTCC...TGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCAGCATGGCCTCCACAATaGGTATCATCATGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPEELKSPTGTDKLCSGPAWPPQ*VSSWLW Trigger: CCACAGCCATGATGATACCCATTGTGGAGGCCATGC...TGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCACCAATCCAGCAGTGCTaGGGGGTAGAACGGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FPEELKSPTGTDKLCSGPPIQQC*GVERSF Trigger: AAAACTCCGTTCTACCCCCCAGCACTGCTGGATTGG...TGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGCACCATGCAGAGTCCAAGTTTTCAGGAGGCCATGACTCCCACTCTCACTTGGCCACAGGCAACATaGAGGCAAGTGAAGCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GGTMQSPSFQEAMTPTLTWPQAT*RQVKHS Trigger: TGAGTGCTTCACTTGCCTTCATGTTGCCTGTGGCCA...AGTGAGAGTGGGAGTCATGGCCTCCTGAAAACTTGGACTCTGCATGGTGCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGCACCATGCAGAGTCCAAGTTTTCAGGAGGCCATGACTCCCACTCTCACTTTGGCGGCTATCATTTaGTGCAGCATGGCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GGTMQSPSFQEAMTPTLTLAAII*CSMAST Trigger: TGTGGAGGCCATGCTGCAGCAAATGATAGCCGCCAA...AGTGAGAGTGGGAGTCATGGCCTCCTGAAAACTTGGACTCTGCATGGTGCCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CCA 90 bp | GCTGAAGGAGGGCTTACTGGGGAGCTGGGAAGGGAGCTCAAACTGTTAATGAATTCAGCCGTGAGGGCTTaGTCCCCACAAAGAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AEGGLTGELGRELKLLMNSAVRA*SPQRAA Trigger: TGCTGCTCTTTGTGGGGACCAAGCCCTCACGGCTGA...ATTCATTAACAGTTTGAGCTCCCTTCCCAGCTCCCCAGTAAGCCCTCCTTCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCACCTGCTCCTGCACATTaGGGTCTTCAAATACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: FPEELKSPTGTDKLCSGPPAPAH*GLQIPP Trigger: AGGTGGTATTTGAAGACCCCAATGTGCAGGAGCAGG...TGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAAGACAACGGAGAGCTTCCTCTCCTGTCTCCCTTTCATATGATGGACACTCCGTCCCGGTCAAGGTaGCTGTACCCCCAATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKDNGELPLLSPFHMMDTPSRSR*LYPQCW Trigger: CCAGCATTGGGGGTACAGCCACCTTGACCGGGACGG...AGTGTCCATCATATGAAAGGGAGACAGGAGAGGAAGCTCTCCGTTGTCTTTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CCA 90 bp | ATTCATCTGCCTCCCTCTGTCTCCTTCACAAGGTACAAAATCACAGACCAGTCACCAGGAGCACCACGTTaGGTCCCGTCCCGGTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IHLPPSVSFTRYKITDQSPGAPR*VPSRSR Trigger: CCTTGACCGGGACGGGACCCAACGTGGTGCTCCTGG...TGACTGGTCTGTGATTTTGTACCTTGTGAAGGAGACAGAGGGAGGCAGATGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
||
| 3UTR CAA 72 bp | GAGCCAGTAGTCTGTCAAAGCCACATAGTACAAGATTaGAGCCCTGGTCCCTCTGGTTCCTGCCTGTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EPVVCQSHIVQD*SPGPSGSCLSQ Trigger: CTGGGACAGGCAGGAACCAGAGGGACCAGGGCTCAAATCTTGTACTATGTGGCTTTGACAGACTACTGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR TCA 90 bp | TCAGACACCAAGAAGCACGCTGCTCCTTCTCAGCCATGCTCTGTTGCTACCAGTCCCGACCCCAGGTGTTaGCTGACAGAAACACAGATA | + |
|
Preference number: 4 (lower is better) Translates to: SDTKKHAAPSQPCSVATSPDPRC*LTETQI Trigger: TATCTGTGTTTCTGTCAGTCAACACCTGGGGTCGGG...ACTGGTAGCAACAGAGCATGGCTGAGAAGGAGCAGCGTGCTTCTTGGTGTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CCA 90 bp | CAGCCAGTTTACTCTGGCAGGGTCTGTCTGCTCAGACACCAAGAAGCACGCTGCTATCAGAATGACGAGTaGAAGCATCAGGATCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QPVYSGRVCLLRHQEARCYQNDE*KHQDRG Trigger: ACCCCGATCCTGATGCTTCCACTCGTCATTCTGATA...GCAGCGTGCTTCTTGGTGTCTGAGCAGACAGACCCTGCCAGAGTAAACTGGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCATATCAGAATGACGAGTaGAAGCATCAGGATCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FPEELKSPTGTDKLCSGPYQNDE*KHQDRG Trigger: ACCCCGATCCTGATGCTTCCACTCGTCATTCTGATA...TGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CCA 90 bp | TCCTGCCTGTCCCAGGAGAGATGGAAGGGTCCTAGTAAAGATGGGCCTCGCGACCTTTCTTCCTCAGTCTaGCTGCTGAAGTTGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SCLSQERWKGPSKDGPRDLSSSV*LLKLNL Trigger: CAAGTTCAACTTCAGCAGCCAGACTGAGGAAGAAAG...GTCGCGAGGCCCATCTTTACTAGGACCCTTCCATCTCTCCTGGGACAGGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGCCTGTCCCAGGAGAGATGGAAGGGTCCTAGTAAAGATGGGCCTCGCGACAAATCGCAAAGGACTTaGACTTGGTCACACAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SCLSQERWKGPSKDGPRDKSQRT*TWSHKS Trigger: AGACTTGTGTGACCAAGTTCAAGTCCTTTGCGATTT...GTCGCGAGGCCCATCTTTACTAGGACCCTTCCATCTCTCCTGGGACAGGCAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCAGTTTACTCTGGCAGGGTCTGTCTGCTCAGACACCAAGAAGCACGCTGCAGTGTTAACACTTGTTaGATTTGCCCAGTCGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QPVYSGRVCLLRHQEARCSVNTC*ICPVGE Trigger: TTCCCCGACTGGGCAAATTCAACAAGTGTTAACACT...GCAGCGTGCTTCTTGGTGTCTGAGCAGACAGACCCTGCCAGAGTAAACTGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CCA 90 bp | CACAAGGTACAAAATCACAGACCAGTCAGCACACTGGAACTTTCCATAGCAGACCCAGTGTCCCCAGGCTaGCCTCCACAGCTGTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: HKVQNHRPVSTLELSIADPVSPG*PPQLYW Trigger: CCAATACAGCTGTGGAGGCCAGCCTGGGGACACTGG...GTCTGCTATGGAAAGTTCCAGTGTGCTGACTGGTCTGTGATTTTGTACCTTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
||
| CDS-3UTR CCA 90 bp | GAGAGCAACTGTTTATTCATCTGCCTCCCTCTGTCTCCTTCACAAGGTACAAAACCGTCCCGGTCAAGGTaGCTGTACCCCCAATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ESNCLFICLPLSPSQGTKPSRSR*LYPQCW Trigger: CCAGCATTGGGGGTACAGCCACCTTGACCGGGACGG...TTTTGTACCTTGTGAAGGAGACAGAGGGAGGCAGATGAATAAACAGTTGCTCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
||
| CDS-3UTR CCA 90 bp | GCTGAAGGAGGGCTTACTGGGGAGCTGGGAAGGGAGCTCAAACTGTTAATGAATAACAATTCCTGCATCTaGCCCAGGAGCACCACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AEGGLTGELGRELKLLMNNNSCI*PRSTTL Trigger: CAACGTGGTGCTCCTGGGCCAGATGCAGGAATTGTT...ATTCATTAACAGTTTGAGCTCCCTTCCCAGCTCCCCAGTAAGCCCTCCTTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCATACTTGTGCACTCTGTaGTCATTGCAACAAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPEELKSPTGTDKLCSGPYLCTL*SLQQDR Trigger: CCTGTCTTGTTGCAATGACCACAGAGTGCACAAGTA...TGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGCACCATGCAGAGTCCAAGTTTTCAGGAGGCCATGACTCCCACTCTCACTAGTGTTAACACTTGTTaGATTTGCCCAGTCGGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GGTMQSPSFQEAMTPTLTSVNTC*ICPVGE Trigger: TTCCCCGACTGGGCAAATTCAACAAGTGTTAACACT...AGTGAGAGTGGGAGTCATGGCCTCCTGAAAACTTGGACTCTGCATGGTGCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR GCA 90 bp | GGTGGACAGAGAGCAACTGTTTATTCATCTGCCTCCCTCTGTCTCCTTCACAAGTTGGCGGCTATCATTTaGTGCAGCATGGCCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GGQRATVYSSASLCLLHKLAAII*CSMAST Trigger: TGTGGAGGCCATGCTGCAGCAAATGATAGCCGCCAA...CTTGTGAAGGAGACAGAGGGAGGCAGATGAATAAACAGTTGCTCTCTGTCCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
||
| CDS-3UTR GCA 90 bp | GGTGGCACCATGCAGAGTCCAAGTTTTCAGGAGGCCATGACTCCCACTCTCACTGCACTCTGTGGTCATTaGAACAAGACAGGACAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GGTMQSPSFQEAMTPTLTALCGH*NKTGQD Trigger: ATCTTGTCCTGTCTTGTTGCAATGACCACAGAGTGC...AGTGAGAGTGGGAGTCATGGCCTCCTGAAAACTTGGACTCTGCATGGTGCCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR TCA 90 bp | CACAAGGTACAAAATCACAGACCAGTCAGCACACTGGAACTTTCCATAGCAGACTGGCGGCAGTATTGCTaGTCCACATGGACAGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HKVQNHRPVSTLELSIADWRQYC*STWTGR Trigger: CCTTCCTGTCCATGTGGATCAGCAATACTGCCGCCA...GTCTGCTATGGAAAGTTCCAGTGTGCTGACTGGTCTGTGATTTTGTACCTTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
||
| CDS-3UTR TCA 90 bp | CAGCCAGTTTACTCTGGCAGGGTCTGTCTGCTCAGACACCAAGAAGCACGCTGCGAACTTGGGCTTTTGTaGAGGTATGATGAAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QPVYSGRVCLLRHQEARCELGLL*RYDEKQ Trigger: TTGCTTTTCATCATACCTTCACAAAAGCCCAAGTTC...GCAGCGTGCTTCTTGGTGTCTGAGCAGACAGACCCTGCCAGAGTAAACTGGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR TCA 90 bp | GGTGGACAGAGAGCAACTGTTTATTCATCTGCCTCCCTCTGTCTCCTTCACAAGCAACATGAAGGCAAGTaGAGCACTCATGGTACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GGQRATVYSSASLCLLHKQHEGK*STHGTG Trigger: CCCTGTACCATGAGTGCTTCACTTGCCTTCATGTTG...CTTGTGAAGGAGACAGAGGGAGGCAGATGAATAAACAGTTGCTCTCTGTCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| CDS-3UTR GCA 90 bp | GCTGAAGGAGGGCTTACTGGGGAGCTGGGAAGGGAGCTCAAACTGTTAATGAATTGGCCACGTTACTTGTaGACTCTGTGGTCATTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AEGGLTGELGRELKLLMNWPRYL*TLWSLQ Trigger: TTGCAATGACCACAGAGTGCACAAGTAACGTGGCCA...ATTCATTAACAGTTTGAGCTCCCTTCCCAGCTCCCCAGTAAGCCCTCCTTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS-3UTR CCA 90 bp | CTGAAAGACAACGGAGAGCTTCCTCTCCTGTCTCCCTTTCATATGATGGACACTGGAGGTAACAGCCACTaGGATGACATCTGTGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LKDNGELPLLSPFHMMDTGGNSH*DDICAP Trigger: TGGTGCACAGATGTCATCCCAGTGGCTGTTACCTCC...AGTGTCCATCATATGAAAGGGAGACAGGAGAGGAAGCTCTCCGTTGTCTTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS-3UTR CCA 90 bp | GCAGACAGAGTATTTGACAAGAGCAAGCCTTCAACAGTGTGGTCAGGAGTCATCAACAATTCCTGCATCTaGCCCAGGAGCACCACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ADRVFDKSKPSTVWSGVINNSCI*PRSTTL Trigger: CAACGTGGTGCTCCTGGGCCAGATGCAGGAATTGTT...GATGACTCCTGACCACACTGTTGAAGGCTTGCTCTTGTCAAATACTCTGTCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| CDS-3UTR CCA 90 bp | CTGAAAGACAACGGAGAGCTTCCTCTCCTGTCTCCCTTTCATATGATGGACACTCAGGGCACTTTCTCTTaGGCGACTTTCCAATCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LKDNGELPLLSPFHMMDTQGTFS*ATFQSS Trigger: GCTGGATTGGAAAGTCGCCCAAGAGAAAGTGCCCTG...AGTGTCCATCATATGAAAGGGAGACAGGAGAGGAAGCTCTCCGTTGTCTTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS-3UTR TCA 90 bp | ATTCATCTGCCTCCCTCTGTCTCCTTCACAAGGTACAAAATCACAGACCAGTCAGTGGCATCTGTGATATaGACGGTGTTTCCCTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: IHLPPSVSFTRYKITDQSVASVI*TVFPST Trigger: GGTCGAGGGAAACACCGTTCATATCACAGATGCCAC...TGACTGGTCTGTGATTTTGTACCTTGTGAAGGAGACAGAGGGAGGCAGATGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| CDS-3UTR TCA 90 bp | GGTGGCACCATGCAGAGTCCAAGTTTTCAGGAGGCCATGACTCCCACTCTCACTGAACTTGGGCTTTTGTaGAGGTATGATGAAAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GGTMQSPSFQEAMTPTLTELGLL*RYDEKQ Trigger: TTGCTTTTCATCATACCTTCACAAAAGCCCAAGTTC...AGTGAGAGTGGGAGTCATGGCCTCCTGAAAACTTGGACTCTGCATGGTGCCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS-3UTR GCA 90 bp | GCTGAAGGAGGGCTTACTGGGGAGCTGGGAAGGGAGCTCAAACTGTTAATGAATGCACTCTGTGGTCATTaGAACAAGACAGGACAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: AEGGLTGELGRELKLLMNALCGH*NKTGQD Trigger: ATCTTGTCCTGTCTTGTTGCAATGACCACAGAGTGC...ATTCATTAACAGTTTGAGCTCCCTTCCCAGCTCCCCAGTAAGCCCTCCTTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS-3UTR TCA 90 bp | GGTGGACAGAGAGCAACTGTTTATTCATCTGCCTCCCTCTGTCTCCTTCACAAGAAATCGCAAAGGACTTaGACTTGGTCACACAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGQRATVYSSASLCLLHKKSQRT*TWSHKS Trigger: AGACTTGTGTGACCAAGTTCAAGTCCTTTGCGATTT...CTTGTGAAGGAGACAGAGGGAGGCAGATGAATAAACAGTTGCTCTCTGTCCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| CDS-3UTR GCA 90 bp | GAGAGCAACTGTTTATTCATCTGCCTCCCTCTGTCTCCTTCACAAGGTACAAAATGGCTGTACCCCCAATaGTGGCTGAATAGCAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: ESNCLFICLPLSPSQGTKWLYPQ*WLNSKH Trigger: GTGTTTGCTATTCAGCCAGCATTGGGGGTACAGCCA...TTTTGTACCTTGTGAAGGAGACAGAGGGAGGCAGATGAATAAACAGTTGCTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| CDS-3UTR GCA 90 bp | ATTCATCTGCCTCCCTCTGTCTCCTTCACAAGGTACAAAATCACAGACCAGTCATGGCCACGTTACTTGTaGACTCTGTGGTCATTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: IHLPPSVSFTRYKITDQSWPRYL*TLWSLQ Trigger: TTGCAATGACCACAGAGTGCACAAGTAACGTGGCCA...TGACTGGTCTGTGATTTTGTACCTTGTGAAGGAGACAGAGGGAGGCAGATGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| CDS-3UTR CCA 90 bp | GAGAGCAACTGTTTATTCATCTGCCTCCCTCTGTCTCCTTCACAAGGTACAAAACCTGCTCCTGCACATTaGGGTCTTCAAATACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: ESNCLFICLPLSPSQGTKPAPAH*GLQIPP Trigger: AGGTGGTATTTGAAGACCCCAATGTGCAGGAGCAGG...TTTTGTACCTTGTGAAGGAGACAGAGGGAGGCAGATGAATAAACAGTTGCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| CDS-3UTR CCA 90 bp | CTGAAAGACAACGGAGAGCTTCCTCTCCTGTCTCCCTTTCATATGATGGACACTATGACATACAGAGGATaGATACCAATGGAACGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LKDNGELPLLSPFHMMDTMTYRG*IPMERA Trigger: GGCTCGTTCCATTGGTATCCATCCTCTGTATGTCAT...AGTGTCCATCATATGAAAGGGAGACAGGAGAGGAAGCTCTCCGTTGTCTTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS-3UTR CCA 90 bp | CACAAGGTACAAAATCACAGACCAGTCAGCACACTGGAACTTTCCATAGCAGACCTTTCTTCCTCAGTCTaGCTGCTGAAGTTGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HKVQNHRPVSTLELSIADLSSSV*LLKLNL Trigger: CAAGTTCAACTTCAGCAGCCAGACTGAGGAAGAAAG...GTCTGCTATGGAAAGTTCCAGTGTGCTGACTGGTCTGTGATTTTGTACCTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| CDS-3UTR CCA 90 bp | CACAAGGTACAAAATCACAGACCAGTCAGCACACTGGAACTTTCCATAGCAGACTACTTGTGCACTCTGTaGTCATTGCAACAAGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: HKVQNHRPVSTLELSIADYLCTL*SLQQDR Trigger: CCTGTCTTGTTGCAATGACCACAGAGTGCACAAGTA...GTCTGCTATGGAAAGTTCCAGTGTGCTGACTGGTCTGTGATTTTGTACCTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| CDS-3UTR GCA 90 bp | CTGAAAGACAACGGAGAGCTTCCTCTCCTGTCTCCCTTTCATATGATGGACACTAAATCCAAACCAAGATaGATAGTTCAGGACATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKDNGELPLLSPFHMMDTKSKPR*IVQDIF Trigger: AAAGATGTCCTGAACTATGCATCTTGGTTTGGATTT...AGTGTCCATCATATGAAAGGGAGACAGGAGAGGAAGCTCTCCGTTGTCTTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS-3UTR GCA 90 bp | CACAAGGTACAAAATCACAGACCAGTCAGCACACTGGAACTTTCCATAGCAGACAAATCCAAACCAAGATaGATAGTTCAGGACATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: HKVQNHRPVSTLELSIADKSKPR*IVQDIF Trigger: AAAGATGTCCTGAACTATGCATCTTGGTTTGGATTT...GTCTGCTATGGAAAGTTCCAGTGTGCTGACTGGTCTGTGATTTTGTACCTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| CDS-3UTR CAA 90 bp | GGACATCCAGAAGAGGCACCAGGACGGGGCTCCCAGCCTGGCAATCCGCTCCCCCCCAGGAGCACCACGTaGGGTCCCGTCCCGGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GHPEEAPGRGSQPGNPLPPRSTT*GPVPVK Trigger: CTTGACCGGGACGGGACCCAACGTGGTGCTCCTGGG...GGGGAGCGGATTGCCAGGCTGGGAGCCCCGTCCTGGTGCCTCTTCTGGATGTCC 69% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS-3UTR CAA 90 bp | GGACATCCAGAAGAGGCACCAGGACGGGGCTCCCAGCCTGGCAATCCGCTCCCCATTGGCGGCTATCATTaGCTGCAGCATGGCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: GHPEEAPGRGSQPGNPLPIGGYH*LQHGLH Trigger: GTGGAGGCCATGCTGCAGCAAATGATAGCCGCCAAT...GGGGAGCGGATTGCCAGGCTGGGAGCCCCGTCCTGGTGCCTCTTCTGGATGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS CCA 90 bp | GCATCTGGCCCAGGAGCACCACGTTGGGTCCCGTCCCGGTCAAGGTaGCTGTACCCCCAATGCTGGCTGAATAGCAAACACATAGGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ASGPGAPRWVPSRSR*LYPQCWLNSKHIGA Trigger: TGCACCTATGTGTTTGCTATTCAGCCAGCATTGGGGGTACAGCCACCTTGACCGGGACGGGACCCAACGTGGTGCTCCTGGGCCAGATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS-3UTR CAA 90 bp | CAGCCGGCAAGGGAAAGGCCTTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGATTGGCGGCTATCATTaGCTGCAGCATGGCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: QPARERPSQRSSRVQRGQIGGYH*LQHGLH Trigger: GTGGAGGCCATGCTGCAGCAAATGATAGCCGCCAAT...CTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAAGGCCTTTCCCTTGCCGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS TCA 90 bp | TGTGGCATCTGTGATATGAACGGTGTTTCCCTCGACCCAGGCGAATaGCAGCCAGCCAGGCATGAAGCCGGGGTCTCGGGAGAACCACAG | + |
|
Preference number: 5 (lower is better) Translates to: CGICDMNGVSLDPGE*QPARHEAGVSGEPQ Trigger: CTGTGGTTCTCCCGAGACCCCGGCTTCATGCCTGGCTGGCTGTCATTCGCCTGGGTCGAGGGAAACACCGTTCATATCACAGATGCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS GCA 90 bp | GTCCCCAGGCTGGCCTCCACAGCTGTATTGGCGGCTATCATTTGCTaGAGCATGGCCTCCACAATGGGTATCATCATGGCTGTGGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VPRLASTAVLAAIIC*SMASTMGIIMAVAA Trigger: TGCCGCCACAGCCATGATGATACCCATTGTGGAGGCCATGCTGCAGCAAATGATAGCCGCCAATACAGCTGTGGAGGCCAGCCTGGGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000140167.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS-3UTR CAA 90 bp | TCCTGCCTGTCCCAGGAGAGATGGAAGGGTCCTAGTAAAGATGGGCCTCGCGACGCTGTGGCGGCAGTATaGCTGATCCACATGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SCLSQERWKGPSKDGPRDAVAAV*LIHMDR Trigger: CCTGTCCATGTGGATCAGCAATACTGCCGCCACAGC...GTCGCGAGGCCCATCTTTACTAGGACCCTTCCATCTCTCCTGGGACAGGCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| CDS TCA 90 bp | GGCCTCCACAATGGGTATCATCATGGCTGTGGCGGCAGTATTGCGTaGGGGCTTGGTCCCCACAAAGAGCAGCATTCTCAGGGCAACCCT | + |
|
Preference number: 5 (lower is better) Translates to: GLHNGYHHGCGGSIA*GLGPHKEQHSQGNP Trigger: AGGGTTGCCCTGAGAATGCTGCTCTTTGTGGGGACCAAGCCCTCACGCAATACTGCCGCCACAGCCATGATGATACCCATTGTGGAGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208056.2 |
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| CDS CCA 90 bp | ACTCGCTGGTCTTGTTCTTGTCCAGCAGCTCCAGTGTCCCCAGGCTaGCCTCCACAGCTGTATTGGCGGCTATCATTTGCTGCAGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: TRWSCSCPAAPVSPG*PPQLYWRLSFAAAW Trigger: CCATGCTGCAGCAAATGATAGCCGCCAATACAGCTGTGGAGGCCAGCCTGGGGACACTGGAGCTGCTGGACAAGAACAAGACCAGCGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000140167.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS CCA 90 bp | GCACATTGGGGTCTTCAAATACCACCTGGCTTCCTGGCAACTCGCTaGTCTTGTTCTTGTCCAGCAGCTCCAGTGTCCCCAGGCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: AHWGLQIPPGFLATR*SCSCPAAPVSPGWP Trigger: AGGCCAGCCTGGGGACACTGGAGCTGCTGGACAAGAACAAGACCAGCGAGTTGCCAGGAAGCCAGGTGGTATTTGAAGACCCCAATGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000140167.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS-3UTR CAA 90 bp | TCCTGCCTGTCCCAGGAGAGATGGAAGGGTCCTAGTAAAGATGGGCCTCGCGACGCCTCCACAGCTGTATaGGCGGCTATCATTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SCLSQERWKGPSKDGPRDASTAV*AAIICC Trigger: GCAGCAAATGATAGCCGCCAATACAGCTGTGGAGGC...GTCGCGAGGCCCATCTTTACTAGGACCCTTCCATCTCTCCTGGGACAGGCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS-3UTR CAA 90 bp | AGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCAGCCCTTGGAAATGAGCCGTCGCTGGTCTTGTTCTaGTCCAGCAGCTCCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPTGTDKLCSGPALGNEPSLVLF*SSSSSV Trigger: GACACTGGAGCTGCTGGACAAGAACAAGACCAGCGA...CGGCTCATTTCCAAGGGCTGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS-3UTR CAA 90 bp | TCCTGCCTGTCCCAGGAGAGATGGAAGGGTCCTAGTAAAGATGGGCCTCGCGACCCAGGGCACTTTCTCTaGGGCGACTTTCCAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SCLSQERWKGPSKDGPRDPGHFL*GDFPIQ Trigger: CTGGATTGGAAAGTCGCCCAAGAGAAAGTGCCCTGG...GTCGCGAGGCCCATCTTTACTAGGACCCTTCCATCTCTCCTGGGACAGGCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS-3UTR CAA 90 bp | AGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCAGCCCTTGGAAATGAGCCGCCAGGGCACTTTCTCTaGGGCGACTTTCCAATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPTGTDKLCSGPALGNEPPGHFL*GDFPIQ Trigger: CTGGATTGGAAAGTCGCCCAAGAGAAAGTGCCCTGG...CGGCTCATTTCCAAGGGCTGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS GCA 90 bp | GCATGGCCTCCACAATGGGTATCATCATGGCTGTGGCGGCAGTATTaGGTGAGGGCTTGGTCCCCACAAAGAGCAGCATTCTCAGGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: AWPPQWVSSWLWRQY*VRAWSPQRAAFSGQ Trigger: TTGCCCTGAGAATGCTGCTCTTTGTGGGGACCAAGCCCTCACGCAATACTGCCGCCACAGCCATGATGATACCCATTGTGGAGGCCATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208056.2 |
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| CDS-3UTR CAA 90 bp | TTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCAGCCTCCACAGCTGTATaGGCGGCTATCATTTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FPEELKSPTGTDKLCSGPASTAV*AAIICC Trigger: GCAGCAAATGATAGCCGCCAATACAGCTGTGGAGGC...TGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS-3UTR CAA 90 bp | GCAGACAGAGTATTTGACAAGAGCAAGCCTTCAACAGTGTGGTCAGGAGTCATCCCCAGGAGCACCACGTaGGGTCCCGTCCCGGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: ADRVFDKSKPSTVWSGVIPRSTT*GPVPVK Trigger: CTTGACCGGGACGGGACCCAACGTGGTGCTCCTGGG...GATGACTCCTGACCACACTGTTGAAGGCTTGCTCTTGTCAAATACTCTGTCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| CDS TCA 90 bp | GGCTTGGTCCCCACAAAGAGCAGCATTCTCAGGGCAACCCTCTTATaGAGTTTCCAGCGTTCCACAGCCACAGCCACAATGAGACTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GLVPTKSSILRATLL*SFQRSTATATMRLP Trigger: GGGCAGTCTCATTGTGGCTGTGGCTGTGGAACGCTGGAAACTTCATAAGAGGGTTGCCCTGAGAATGCTGCTCTTTGTGGGGACCAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000140167.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS CCA 90 bp | TTCCTGCTCCTGCACATTGGGGTCTTCAAATACCACCTGGCTTCCTaGCAACTCGCTGGTCTTGTTCTTGTCCAGCAGCTCCAGTGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FLLLHIGVFKYHLAS*QLAGLVLVQQLQCP Trigger: GGGACACTGGAGCTGCTGGACAAGAACAAGACCAGCGAGTTGCCAGGAAGCCAGGTGGTATTTGAAGACCCCAATGTGCAGGAGCAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000140167.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS CCA 90 bp | TCATTTGCTGCAGCATGGCCTCCACAATGGGTATCATCATGGCTGTaGCGGCAGTATTGCGTGAGGGCTTGGTCCCCACAAAGAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SFAAAWPPQWVSSWL*RQYCVRAWSPQRAA Trigger: TGCTGCTCTTTGTGGGGACCAAGCCCTCACGCAATACTGCCGCCACAGCCATGATGATACCCATTGTGGAGGCCATGCTGCAGCAAATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208056.2 |
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| CDS CCA 90 bp | CGGCTATCATTTGCTGCAGCATGGCCTCCACAATGGGTATCATCATaGCTGTGGCGGCAGTATTGCGTGAGGGCTTGGTCCCCACAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLSFAAAWPPQWVSS*LWRQYCVRAWSPQR Trigger: TCTTTGTGGGGACCAAGCCCTCACGCAATACTGCCGCCACAGCCATGATGATACCCATTGTGGAGGCCATGCTGCAGCAAATGATAGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208056.2 |
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| CDS CCA 90 bp | CAGCTGTATTGGCGGCTATCATTTGCTGCAGCATGGCCTCCACAATaGGTATCATCATGGCTGTGGCGGCAGTATTGCGTGAGGGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: QLYWRLSFAAAWPPQ*VSSWLWRQYCVRAW Trigger: CCAAGCCCTCACGCAATACTGCCGCCACAGCCATGATGATACCCATTGTGGAGGCCATGCTGCAGCAAATGATAGCCGCCAATACAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208056.2 |
||
| CDS-3UTR CAA 90 bp | AGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCAGCCCTTGGAAATGAGCCGGCACACCTGGCAAACTaGTCAGGTATCAGAATGACG | + |
|
Preference number: 5 (lower is better) Translates to: SPTGTDKLCSGPALGNEPAHLAN*SGIRMT Trigger: CGTCATTCTGATACCTGACAAGTTTGCCAGGTGTGC...CGGCTCATTTCCAAGGGCTGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CAA 90 bp | TCCTGCCTGTCCCAGGAGAGATGGAAGGGTCCTAGTAAAGATGGGCCTCGCGACCCCAGGAACAGCATGTaGGTGTCCTTCATGTATTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCLSQERWKGPSKDGPRDPRNSM*VSFMYW Trigger: CCAATACATGAAGGACACCAACATGCTGTTCCTGGG...GTCGCGAGGCCCATCTTTACTAGGACCCTTCCATCTCTCCTGGGACAGGCAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCGGCAAGGGAAAGGCCTTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGCTGCTGAAGTTGAACTaGGGCTTTTGTGAAGGTATG | + |
|
Preference number: 5 (lower is better) Translates to: QPARERPSQRSSRVQRGQLLKLN*GFCEGM Trigger: CATACCTTCACAAAAGCCCAAGTTCAACTTCAGCAG...CTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAAGGCCTTTCCCTTGCCGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CAA 90 bp | AGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCAGCCCTTGGAAATGAGCCGAGCATCATCACCATGTaGGGGAAGGCAAATCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SPTGTDKLCSGPALGNEPSIITM*GKANPN Trigger: GTTTGGATTTGCCTTCCCCAACATGGTGATGATGCT...CGGCTCATTTCCAAGGGCTGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CAA 90 bp | TCCTGCCTGTCCCAGGAGAGATGGAAGGGTCCTAGTAAAGATGGGCCTCGCGACGTCTGGCTGCTGAAGTaGAACTTGGGCTTTTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: SCLSQERWKGPSKDGPRDVWLLK*NLGFCE Trigger: TTCACAAAAGCCCAAGTTCAACTTCAGCAGCCAGAC...GTCGCGAGGCCCATCTTTACTAGGACCCTTCCATCTCTCCTGGGACAGGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS-3UTR CAA 90 bp | TCCTGCCTGTCCCAGGAGAGATGGAAGGGTCCTAGTAAAGATGGGCCTCGCGACTGCACTCTGTGGTCATaGCAACAAGACAGGACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: SCLSQERWKGPSKDGPRDCTLWS*QQDRTR Trigger: TCTTGTCCTGTCTTGTTGCAATGACCACAGAGTGCA...GTCGCGAGGCCCATCTTTACTAGGACCCTTCCATCTCTCCTGGGACAGGCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS TCA 90 bp | AAAAGCAAAATGGCCACAAAGATGGCCACTGTGGCATCTGTGATATaGACGGTGTTTCCCTCGACCCAGGCGAATGACAGCCAGCCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KSKMATKMATVASVI*TVFPSTQANDSQPG Trigger: GCCTGGCTGGCTGTCATTCGCCTGGGTCGAGGGAAACACCGTTCATATCACAGATGCCACAGTGGCCATCTTTGTGGCCATTTTGCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS CCA 90 bp | CAATGGGTATCATCATGGCTGTGGCGGCAGTATTGCGTGAGGGCTTaGTCCCCACAAAGAGCAGCATTCTCAGGGCAACCCTCTTATGAA | + |
|
Preference number: 5 (lower is better) Translates to: QWVSSWLWRQYCVRA*SPQRAAFSGQPSYE Trigger: TTCATAAGAGGGTTGCCCTGAGAATGCTGCTCTTTGTGGGGACCAAGCCCTCACGCAATACTGCCGCCACAGCCATGATGATACCCATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208056.2 |
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| CDS-3UTR CAA 90 bp | GGTGGCACCATGCAGAGTCCAAGTTTTCAGGAGGCCATGACTCCCACTCTCACTCCCAGGAACAGCATGTaGGTGTCCTTCATGTATTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGTMQSPSFQEAMTPTLTPRNSM*VSFMYW Trigger: CCAATACATGAAGGACACCAACATGCTGTTCCTGGG...AGTGAGAGTGGGAGTCATGGCCTCCTGAAAACTTGGACTCTGCATGGTGCCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS-3UTR CAA 90 bp | TTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGACAAACTGTGCAGTGGCCCAAGCATCATCACCATGTaGGGGAAGGCAAATCCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: FPEELKSPTGTDKLCSGPSIITM*GKANPN Trigger: GTTTGGATTTGCCTTCCCCAACATGGTGATGATGCT...TGGGCCACTGCACAGTTTGTCTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS-3UTR CAA 90 bp | TCCTGCCTGTCCCAGGAGAGATGGAAGGGTCCTAGTAAAGATGGGCCTCGCGACCTGCTGAAGTTGAACTaGGGCTTTTGTGAAGGTATG | + |
|
Preference number: 5 (lower is better) Translates to: SCLSQERWKGPSKDGPRDLLKLN*GFCEGM Trigger: CATACCTTCACAAAAGCCCAAGTTCAACTTCAGCAG...GTCGCGAGGCCCATCTTTACTAGGACCCTTCCATCTCTCCTGGGACAGGCAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGTTTACTCTGGCAGGGTCTGTCTGCTCAGACACCAAGAAGCACGCTGCTGCACTCTGTGGTCATaGCAACAAGACAGGACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: QPVYSGRVCLLRHQEARCCTLWS*QQDRTR Trigger: TCTTGTCCTGTCTTGTTGCAATGACCACAGAGTGCA...GCAGCGTGCTTCTTGGTGTCTGAGCAGACAGACCCTGCCAGAGTAAACTGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS-3UTR CAA 90 bp | CAGCCGGCAAGGGAAAGGCCTTCCCAGAGGAGCTCAAGAGTCCAACGGGGACAGCATAGGTGCATAGCCTaGTACATATTCTTTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QPARERPSQRSSRVQRGQHRCIA*YIFFVS Trigger: AGAAACAAAGAATATGTACAAGGCTATGCACCTATG...CTGTCCCCGTTGGACTCTTGAGCTCCTCTGGGAAGGCCTTTCCCTTGCCGGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CAA 90 bp | CTGAAAGACAACGGAGAGCTTCCTCTCCTGTCTCCCTTTCATATGATGGACACTTCGCTGGTCTTGTTCTaGTCCAGCAGCTCCAGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKDNGELPLLSPFHMMDTSLVLF*SSSSSV Trigger: GACACTGGAGCTGCTGGACAAGAACAAGACCAGCGA...AGTGTCCATCATATGAAAGGGAGACAGGAGAGGAAGCTCTCCGTTGTCTTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS TCA 90 bp | CAACCCTCTTATGAAGTTTCCAGCGTTCCACAGCCACAGCCACAATaGGACTGCCCAGGAACAGCATGTTGGTGTCCTTCATGTATTGGA | + |
|
Preference number: 5 (lower is better) Translates to: QPSYEVSSVPQPQPQ*DCPGTACWCPSCIG Trigger: TCCAATACATGAAGGACACCAACATGCTGTTCCTGGGCAGTCTCATTGTGGCTGTGGCTGTGGAACGCTGGAAACTTCATAAGAGGGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000140167.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
||
| CDS-3UTR CAA 90 bp | GGTGGCACCATGCAGAGTCCAAGTTTTCAGGAGGCCATGACTCCCACTCTCACTAAAATCGCAAAGGACTaGAACTTGGTCACACAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GGTMQSPSFQEAMTPTLTKIAKD*NLVTQV Trigger: GACTTGTGTGACCAAGTTCAAGTCCTTTGCGATTTT...AGTGAGAGTGGGAGTCATGGCCTCCTGAAAACTTGGACTCTGCATGGTGCCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
||
| CDS-3UTR CAA 90 bp | CAGCCAGTTTACTCTGGCAGGGTCTGTCTGCTCAGACACCAAGAAGCACGCTGCCCTTGTACATATTCTTaGTTTCTTCGTCTTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: QPVYSGRVCLLRHQEARCPCTYS*FLRLPA Trigger: AGCAGGAAGACGAAGAAACAAAGAATATGTACAAGG...GCAGCGTGCTTCTTGGTGTCTGAGCAGACAGACCCTGCCAGAGTAAACTGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS GCA 90 bp | GAACAGGGTGGTAGTGGCCACGTTACTTGTGCACTCTGTGGTCATTaGAACAAGACAGGACAAGATCAAGGTAATGACAGCAGGTTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: EQGGSGHVTCALCGH*NKTGQDQGNDSRFH Trigger: GTGAAACCTGCTGTCATTACCTTGATCTTGTCCTGTCTTGTTGCAATGACCACAGAGTGCACAAGTAACGTGGCCACTACCACCCTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS CCA 90 bp | GCAAGTGAAGCACTCATGGTACAGGGAATCATGACATACAGAGGATaGATACCAATGGAACGAGCCATGGAGGCAAAGATAGGCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ASEALMVQGIMTYRG*IPMERAMEAKIGRN Trigger: GTTCCTGCCTATCTTTGCCTCCATGGCTCGTTCCATTGGTATCCATCCTCTGTATGTCATGATTCCCTGTACCATGAGTGCTTCACTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS CCA 90 bp | TACCTGCTTGGAGTCCAGAACCTTGTCAGGTATCAGAATGACGAGTaGAAGCATCAGGATCGGGGTGAAGAGCAAAATCGCAAAGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: YLLGVQNLVRYQNDE*KHQDRGEEQNRKGL Trigger: AAGTCCTTTGCGATTTTGCTCTTCACCCCGATCCTGATGCTTCCACTCGTCATTCTGATACCTGACAAGGTTCTGGACTCCAAGCAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140167.3 |
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| CDS-3UTR CAA 90 bp | GCTGAAGGAGGGCTTACTGGGGAGCTGGGAAGGGAGCTCAAACTGTTAATGAATTGGATACATACCTGCTaGGAGTCCAGAACCTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: AEGGLTGELGRELKLLMNWIHTC*ESRTFK Trigger: TTTGAAGGTTCTGGACTCCAAGCAGGTATGTATCCA...ATTCATTAACAGTTTGAGCTCCCTTCCCAGCTCCCCAGTAAGCCCTCCTTCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS GCA 90 bp | TGCATAGCCTTGTACATATTCTTTGTTTCTTCGTCTTCCTGCTCCTaGACATTGGGGTCTTCAAATACCACCTGGCTTCCTGGCAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: CIALYIFFVSSSSCS*TLGSSNTTWLPGNS Trigger: CGAGTTGCCAGGAAGCCAGGTGGTATTTGAAGACCCCAATGTGCAGGAGCAGGAAGACGAAGAAACAAAGAATATGTACAAGGCTATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS CCA 90 bp | AACATAGGCACACCTGGCAAACTTGTCAGGTATCAGAATGACGAGTaGAAGCATCAGGATCGGGGTGAAGAGCAAAATCGCAAAGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: NIGTPGKLVRYQNDE*KHQDRGEEQNRKGL Trigger: AAGTCCTTTGCGATTTTGCTCTTCACCCCGATCCTGATGCTTCCACTCGTCATTCTGATACCTGACAAGTTTGCCAGGTGTGCCTATGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000208056.2 |
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| CDS-3UTR CAA 90 bp | ATTCATCTGCCTCCCTCTGTCTCCTTCACAAGGTACAAAATCACAGACCAGTCAGCACACCTGGCAAACTaGTCAGGTATCAGAATGACG | + |
|
Preference number: 5 (lower is better) Translates to: IHLPPSVSFTRYKITDQSAHLAN*SGIRMT Trigger: CGTCATTCTGATACCTGACAAGTTTGCCAGGTGTGC...TGACTGGTCTGTGATTTTGTACCTTGTGAAGGAGACAGAGGGAGGCAGATGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| CDS-3UTR CAA 90 bp | GGTGGCACCATGCAGAGTCCAAGTTTTCAGGAGGCCATGACTCCCACTCTCACTCATAGGTGCATAGCCTaGTACATATTCTTTGTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: GGTMQSPSFQEAMTPTLTHRCIA*YIFFVS Trigger: AGAAACAAAGAATATGTACAAGGCTATGCACCTATG...AGTGAGAGTGGGAGTCATGGCCTCCTGAAAACTTGGACTCTGCATGGTGCCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021161.14 ENSMUST00000208056.2 |
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| CDS CCA 90 bp | GGAACAGCATGTTGGTGTCCTTCATGTATTGGATACATACCTGCTTaGAGTCCAGAACCTTCAAAAGTGGGAAGAGTAAGACAGGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: GTACWCPSCIGYIPA*SPEPSKVGRVRQAG Trigger: TCCTGCCTGTCTTACTCTTCCCACTTTTGAAGGTTCTGGACTCCAAGCAGGTATGTATCCAATACATGAAGGACACCAACATGCTGTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000208056.2 |
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| CDS-3UTR CAA 90 bp | ATTCATCTGCCTCCCTCTGTCTCCTTCACAAGGTACAAAATCACAGACCAGTCAGTCTGGCTGCTGAAGTaGAACTTGGGCTTTTGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: IHLPPSVSFTRYKITDQSVWLLK*NLGFCE Trigger: TTCACAAAAGCCCAAGTTCAACTTCAGCAGCCAGAC...TGACTGGTCTGTGATTTTGTACCTTGTGAAGGAGACAGAGGGAGGCAGATGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| CDS GCA 90 bp | CACCAGCATCATCACCATGTTGGGGAAGGCAAATCCAAACCAAGATaGATAGTTCAGGACATCTTTACTGTCAGGAAACAATTCCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HQHHHHVGEGKSKPR*IVQDIFTVRKQFLH Trigger: ATGCAGGAATTGTTTCCTGACAGTAAAGATGTCCTGAACTATGCATCTTGGTTTGGATTTGCCTTCCCCAACATGGTGATGATGCTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS CCA 90 bp | CTTCATGTATTGGATACATACCTTGTCAGGTATCAGAATGACGAGTaGAAGCATCAGGATCGGGGTGAAGAGCAAAATCGCAAAGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: LHVLDTYLVRYQNDE*KHQDRGEEQNRKGL Trigger: AAGTCCTTTGCGATTTTGCTCTTCACCCCGATCCTGATGCTTCCACTCGTCATTCTGATACCTGACAAGGTATGTATCCAATACATGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208912.2 |
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| CDS-3UTR CAA 90 bp | ATTCATCTGCCTCCCTCTGTCTCCTTCACAAGGTACAAAATCACAGACCAGTCAAAAATCGCAAAGGACTaGAACTTGGTCACACAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: IHLPPSVSFTRYKITDQSKIAKD*NLVTQV Trigger: GACTTGTGTGACCAAGTTCAAGTCCTTTGCGATTTT...TGACTGGTCTGTGATTTTGTACCTTGTGAAGGAGACAGAGGGAGGCAGATGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000021161.14 |
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| CDS CCA 72 bp | CCAGGAGCACCACGTTGGGTCCCGTCCCGGTCAAGGTaGCTGTACCCCCAATGCTGGCTGAATAGCAAACAC | + |
|
Preference number: 6 (lower is better) Translates to: PGAPRWVPSRSR*LYPQCWLNSKH Trigger: GTGTTTGCTATTCAGCCAGCATTGGGGGTACAGCCACCTTGACCGGGACGGGACCCAACGTGGTGCTCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS TCA 72 bp | TGTGATATGAACGGTGTTTCCCTCGACCCAGGCGAATaGCAGCCAGCCAGGCATGAAGCCGGGGTCTCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: CDMNGVSLDPGE*QPARHEAGVSG Trigger: TCCCGAGACCCCGGCTTCATGCCTGGCTGGCTGTCATTCGCCTGGGTCGAGGGAAACACCGTTCATATCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS CAA 72 bp | AGCTCCAGTGTCCCCAGGCTGGCCTCCACAGCTGTATaGGCGGCTATCATTTGCTGCAGCATGGCCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SSSVPRLASTAV*AAIICCSMAST Trigger: TGTGGAGGCCATGCTGCAGCAAATGATAGCCGCCAATACAGCTGTGGAGGCCAGCCTGGGGACACTGGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000140167.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS CCA 72 bp | TCATCATGGCTGTGGCGGCAGTATTGCGTGAGGGCTTaGTCCCCACAAAGAGCAGCATTCTCAGGGCAACCC | + |
|
Preference number: 6 (lower is better) Translates to: SSWLWRQYCVRA*SPQRAAFSGQP Trigger: GGGTTGCCCTGAGAATGCTGCTCTTTGTGGGGACCAAGCCCTCACGCAATACTGCCGCCACAGCCATGATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208056.2 |
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| CDS CCA 72 bp | GCAGCATGGCCTCCACAATGGGTATCATCATGGCTGTaGCGGCAGTATTGCGTGAGGGCTTGGTCCCCACAA | + |
|
Preference number: 6 (lower is better) Translates to: AAWPPQWVSSWL*RQYCVRAWSPQ Trigger: TTGTGGGGACCAAGCCCTCACGCAATACTGCCGCCACAGCCATGATGATACCCATTGTGGAGGCCATGCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208056.2 |
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| CDS CAA 90 bp | AGCATGGCCTCCACAATGGGTATCATCATGGCTGTGGCGGCAGTATaGCGTGAGGGCTTGGTCCCCACAAAGAGCAGCATTCTCAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SMASTMGIIMAVAAV*REGLVPTKSSILRA Trigger: TGCCCTGAGAATGCTGCTCTTTGTGGGGACCAAGCCCTCACGCAATACTGCCGCCACAGCCATGATGATACCCATTGTGGAGGCCATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208056.2 |
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| CDS CCA 72 bp | AGGACATCTTTACTGTCAGGAAACAATTCCTGCATCTaGCCCAGGAGCACCACGTTGGGTCCCGTCCCGGTC | + |
|
Preference number: 6 (lower is better) Translates to: RTSLLSGNNSCI*PRSTTLGPVPV Trigger: GACCGGGACGGGACCCAACGTGGTGCTCCTGGGCCAGATGCAGGAATTGTTTCCTGACAGTAAAGATGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS CAA 72 bp | TCAAATACCACCTGGCTTCCTGGCAACTCGCTGGTCTaGTTCTTGTCCAGCAGCTCCAGTGTCCCCAGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SNTTWLPGNSLV*FLSSSSSVPRL Trigger: CAGCCTGGGGACACTGGAGCTGCTGGACAAGAACAAGACCAGCGAGTTGCCAGGAAGCCAGGTGGTATTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000140167.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS CAA 72 bp | ATCATCATGGCTGTGGCGGCAGTATTGCGTGAGGGCTaGGTCCCCACAAAGAGCAGCATTCTCAGGGCAACC | + |
|
Preference number: 6 (lower is better) Translates to: IIMAVAAVLREG*VPTKSSILRAT Trigger: GGTTGCCCTGAGAATGCTGCTCTTTGTGGGGACCAAGCCCTCACGCAATACTGCCGCCACAGCCATGATGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208056.2 |
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| CDS CCA 72 bp | GGTCTTCAAATACCACCTGGCTTCCTGGCAACTCGCTaGTCTTGTTCTTGTCCAGCAGCTCCAGTGTCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GLQIPPGFLATR*SCSCPAAPVSP Trigger: TGGGGACACTGGAGCTGCTGGACAAGAACAAGACCAGCGAGTTGCCAGGAAGCCAGGTGGTATTTGAAGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000140167.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS CCA 72 bp | TGGCGGCTATCATTTGCTGCAGCATGGCCTCCACAATaGGTATCATCATGGCTGTGGCGGCAGTATTGCGTG | + |
|
Preference number: 6 (lower is better) Translates to: WRLSFAAAWPPQ*VSSWLWRQYCV Trigger: CACGCAATACTGCCGCCACAGCCATGATGATACCCATTGTGGAGGCCATGCTGCAGCAAATGATAGCCGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208056.2 |
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| CDS CAA 72 bp | GTGACAAACATAAAGCCCAGCATCAGCCGTGAGGGCTaGGTCCCCACAAAGAGCAGCATTCTCAGGGCAACC | + |
|
Preference number: 6 (lower is better) Translates to: VTNIKPSISREG*VPTKSSILRAT Trigger: GGTTGCCCTGAGAATGCTGCTCTTTGTGGGGACCAAGCCCTCACGGCTGATGCTGGGCTTTATGTTTGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000140167.3 ENSMUST00000208912.2 |
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| CDS GCA 72 bp | CTGGCCTCCACAGCTGTATTGGCGGCTATCATTTGCTaGAGCATGGCCTCCACAATGGGTATCATCATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LASTAVLAAIIC*SMASTMGIIMA Trigger: AGCCATGATGATACCCATTGTGGAGGCCATGCTGCAGCAAATGATAGCCGCCAATACAGCTGTGGAGGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000140167.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS GCA 72 bp | AGGCTGGCCTCCACAGCTGTATTGGCGGCTATCATTTaGTGCAGCATGGCCTCCACAATGGGTATCATCATG | + |
|
Preference number: 6 (lower is better) Translates to: RLASTAVLAAII*CSMASTMGIIM Trigger: CATGATGATACCCATTGTGGAGGCCATGCTGCAGCAAATGATAGCCGCCAATACAGCTGTGGAGGCCAGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000140167.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS CCA 72 bp | TCCTGCTCCTGCACATTGGGGTCTTCAAATACCACCTaGCTTCCTGGCAACTCGCTGGTCTTGTTCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SCSCTLGSSNTT*LPGNSLVLFLS Trigger: GGACAAGAACAAGACCAGCGAGTTGCCAGGAAGCCAGGTGGTATTTGAAGACCCCAATGTGCAGGAGCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000140167.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
||
| CDS CAA 72 bp | TCCACAATGGGTATCATCATGGCTGTGGCGGCAGTATaGCGTGAGGGCTTGGTCCCCACAAAGAGCAGCATT | + |
|
Preference number: 6 (lower is better) Translates to: STMGIIMAVAAV*REGLVPTKSSI Trigger: AATGCTGCTCTTTGTGGGGACCAAGCCCTCACGCAATACTGCCGCCACAGCCATGATGATACCCATTGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208056.2 |
||
| CDS TCA 72 bp | CCCACAAAGAGCAGCATTCTCAGGGCAACCCTCTTATaGAGTTTCCAGCGTTCCACAGCCACAGCCACAATG | + |
|
Preference number: 6 (lower is better) Translates to: PTKSSILRATLL*SFQRSTATATM Trigger: CATTGTGGCTGTGGCTGTGGAACGCTGGAAACTTCATAAGAGGGTTGCCCTGAGAATGCTGCTCTTTGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000140167.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS CAA 90 bp | CGTTCCACAGCCACAGCCACAATGAGACTGCCCAGGAACAGCATGTaGGTGTCCTTCATGTATTGGATACATACCTGCTTGGAGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSTATATMRLPRNSM*VSFMYWIHTCLESR Trigger: TCTGGACTCCAAGCAGGTATGTATCCAATACATGAAGGACACCAACATGCTGTTCCTGGGCAGTCTCATTGTGGCTGTGGCTGTGGAACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000140167.3 ENSMUST00000208056.2 |
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| CDS CCA 72 bp | GGAGTCCAGAACCTTGTCAGGTATCAGAATGACGAGTaGAAGCATCAGGATCGGGGTGAAGAGCAAAATCGC | + |
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Preference number: 6 (lower is better) Translates to: GVQNLVRYQNDE*KHQDRGEEQNR Trigger: GCGATTTTGCTCTTCACCCCGATCCTGATGCTTCCACTCGTCATTCTGATACCTGACAAGGTTCTGGACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140167.3 |
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| CDS CCA 72 bp | ACACCTGGCAAACTTGTCAGGTATCAGAATGACGAGTaGAAGCATCAGGATCGGGGTGAAGAGCAAAATCGC | + |
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Preference number: 6 (lower is better) Translates to: TPGKLVRYQNDE*KHQDRGEEQNR Trigger: GCGATTTTGCTCTTCACCCCGATCCTGATGCTTCCACTCGTCATTCTGATACCTGACAAGTTTGCCAGGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000208056.2 |
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| CDS CAA 90 bp | CGTTCCACAGCCACAGCCACAATGAGACTGCCCAGGAACAGCATGTaGGTGTCCTTCATGTATTGGATACATACCTTGTCAGGTATCAGA | + |
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Preference number: 6 (lower is better) Translates to: RSTATATMRLPRNSM*VSFMYWIHTLSGIR Trigger: TCTGATACCTGACAAGGTATGTATCCAATACATGAAGGACACCAACATGCTGTTCCTGGGCAGTCTCATTGTGGCTGTGGCTGTGGAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208912.2 |
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| CDS CAA 90 bp | CACAATGAGACTGCCCAGGAACAGCATGTTGGTGTCCTTCATGTATaGGATACATACCTGCTTGGAGTCCAGAACCTTGTCAGGTATCAG | + |
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Preference number: 6 (lower is better) Translates to: HNETAQEQHVGVLHV*DTYLLGVQNLVRYQ Trigger: CTGATACCTGACAAGGTTCTGGACTCCAAGCAGGTATGTATCCAATACATGAAGGACACCAACATGCTGTTCCTGGGCAGTCTCATTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140167.3 |
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| CDS CCA 72 bp | TTGGATACATACCTTGTCAGGTATCAGAATGACGAGTaGAAGCATCAGGATCGGGGTGAAGAGCAAAATCGC | + |
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Preference number: 6 (lower is better) Translates to: LDTYLVRYQNDE*KHQDRGEEQNR Trigger: GCGATTTTGCTCTTCACCCCGATCCTGATGCTTCCACTCGTCATTCTGATACCTGACAAGGTATGTATCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208912.2 |
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| CDS CAA 72 bp | ATGTATTGGATACATACCTGCTTGGAGTCCAGAACCTaGTCAGGTATCAGAATGACGAGTGGAAGCATCAGG | + |
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Preference number: 6 (lower is better) Translates to: MYWIHTCLESRT*SGIRMTSGSIR Trigger: CCTGATGCTTCCACTCGTCATTCTGATACCTGACAAGGTTCTGGACTCCAAGCAGGTATGTATCCAATACAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140167.3 |
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| CDS CAA 72 bp | ACTGCCCAGGAACAGCATGTTGGTGTCCTTCATGTATaGGATACATACCTTGTCAGGTATCAGAATGACGAG | + |
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Preference number: 6 (lower is better) Translates to: TAQEQHVGVLHV*DTYLVRYQNDE Trigger: CTCGTCATTCTGATACCTGACAAGGTATGTATCCAATACATGAAGGACACCAACATGCTGTTCCTGGGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208912.2 |
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| CDS GCA 72 bp | AGCATGTTGGTGTCCTTCATGTATTGGATACATACCTaGTTGGAGTCCAGAACCTTCAAAAGTGGGAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: SMLVSFMYWIHT*LESRTFKSGKS Trigger: ACTCTTCCCACTTTTGAAGGTTCTGGACTCCAAGCAGGTATGTATCCAATACATGAAGGACACCAACATGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000208056.2 |
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| CDS GCA 72 bp | AGCATGTTGGTGTCCTTCATGTATTGGATACATACCTaGTTGGAGTCCAGAACCTTGTCAGGTATCAGAATG | + |
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Preference number: 6 (lower is better) Translates to: SMLVSFMYWIHT*LESRTLSGIRM Trigger: CATTCTGATACCTGACAAGGTTCTGGACTCCAAGCAGGTATGTATCCAATACATGAAGGACACCAACATGCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140167.3 |
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| CDS CAA 72 bp | AAGTTATCCAAGTTAAACATAGCCCGACCCCAGGTGTaGACTGACAGAAACACAGATAGGATTCCAACGAAG | + |
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Preference number: 6 (lower is better) Translates to: KLSKLNIARPQV*TDRNTDRIPTK Trigger: CTTCGTTGGAATCCTATCTGTGTTTCTGTCAGTCAACACCTGGGGTCGGGCTATGTTTAACTTGGATAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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| CDS GCA 72 bp | CATCACCATGTTGGGGAAGGCAAATCCAAACCAAGATaGATAGTTCAGGACATCTTTACTGTCAGGAAACAA | + |
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Preference number: 6 (lower is better) Translates to: HHHVGEGKSKPR*IVQDIFTVRKQ Trigger: TTGTTTCCTGACAGTAAAGATGTCCTGAACTATGCATCTTGGTTTGGATTTGCCTTCCCCAACATGGTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021161.14 ENSMUST00000137701.3 ENSMUST00000208056.2 ENSMUST00000208912.2 |
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